Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	PPHLN1	Gene	0	64.18	103.87	117.30	133.24	113.32	129.72	64.52
2	395580	Transcript	0	65.52	95.58	98.96	129.96	74.91	141.20	65.60
3	395568	Transcript	0	69.08	161.72	113.24	260.81	120.53	182.27	72.22
4	358314	Transcript	0	0	0	0	0	0	0	0
5	317560	Transcript	0	0.00	0.20	0.23	0.33	0.00	0.20	0.00
6	256678	Transcript	0	13.51	10.17	25.86	21.65	34.48	24.18	10.55
7	337898	Transcript	0	0	0	0	0	0	0	0
8	ER1a	ExonRegion	0	0.03	3.37	0.48	2.72	0.27	4.77	0.00
9	ER1b	ExonRegion	0	122.38	233.15	119.28	325.54	235.86	216.94	88.06
10	E1a_E2a	KnownJunction	1	87.19	60.82	46.24	31.97	86.22	32.40	34.85
11	E1a_E3a	KnownJunction	0	110.14	295.90	159.96	480.68	181.26	310.21	118.94
12	ER2a	ExonRegion	1	54.51	56.73	30.14	27.64	55.54	21.33	27.19
13	E2a_E3a	KnownJunction	1	10.48	46.68	10.78	18.86	22.45	11.28	11.67
14	ER3a	ExonRegion	0	95.04	263.39	123.86	305.36	90.91	236.19	90.28
15	E3a_E4a	KnownJunction	0	85.42	90.01	63.63	137.95	78.43	141.96	64.61
16	E3a_E5a	KnownJunction	0	63.64	244.51	69.38	289.12	30.64	175.75	32.70
17	E3a_E6a	NovelJunction	0	0.00	19.15	0.73	16.82	0.00	8.63	4.00
18	ER4a	ExonRegion	0	96.10	121.84	124.22	186.85	244.68	177.97	117.39
19	E4a_E5a	KnownJunction	0	54.59	150.06	86.18	190.97	151.02	190.44	108.45
20	ER5a	ExonRegion	0	154.02	341.43	212.92	462.00	201.20	360.92	159.08
21	E5a_E6a	KnownJunction	0	207.74	256.80	278.09	344.60	244.15	293.78	159.90
22	E5a_E9a	NovelJunction	0	4.92	5.18	16.67	7.31	6.18	15.20	2.19
23	I5_AR2	ActiveIntronRegion	0	22.73	8.07	16.52	5.58	30.12	4.73	8.33
24	ER6a	ExonRegion	0	172.91	317.42	280.43	352.53	288.94	342.40	179.52
25	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	E6a_E8a	KnownJunction	0	138.21	191.15	179.05	153.50	104.34	133.38	150.77
27	E6a_E9a	NovelJunction	1	38.44	183.79	105.65	306.59	196.36	275.69	15.18
28	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
29	ER7a	ExonRegion	0	0.00	1.21	1.35	1.25	0.00	1.23	0.00
30	ER8a	ExonRegion	0	135.99	181.48	186.85	141.78	85.22	122.41	152.22
31	E8a_E9a	KnownJunction	0	126.24	159.49	195.57	103.16	66.95	104.39	132.61
32	E8b_E9b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
33	ER8b	ExonRegion	0	0.00	0.00	0.00	0.75	0.00	0.00	0.00
34	E9_Ab	NovelBoundary	0	67.19	78.42	121.67	44.56	28.91	46.93	64.62
35	ER9a	ExonRegion	0	133.27	198.89	219.67	156.23	112.92	125.75	154.87
36	ER9b	ExonRegion	0	148.39	317.56	305.64	342.01	275.34	318.91	183.44
37	E9a_E10a	KnownJunction	0	145.65	364.20	294.68	435.46	295.45	438.58	169.24
38	E9a_E10b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
39	ER10a	ExonRegion	0	142.54	377.21	306.85	446.41	312.60	422.36	180.45
40	ER10b	ExonRegion	0	141.05	357.33	301.73	423.49	344.49	360.85	170.16
41	E10a_E11a	KnownJunction	0	151.08	360.23	329.80	441.02	357.83	386.27	185.88
42	ER11a	ExonRegion	0	163.04	340.21	350.11	472.70	345.43	364.35	194.59
43	E11a_E12a	KnownJunction	0	237.88	328.63	409.97	497.93	349.71	347.57	190.59
44	ER12a	ExonRegion	0	190.35	309.45	367.10	422.63	286.47	396.60	173.15
45	E12_Da	KnownBoundary	0	93.88	150.93	153.46	239.70	151.04	192.32	109.92
46	E12a_E13a	KnownJunction	1	68.03	65.18	167.69	77.70	67.08	115.21	41.10
47	ER12b	ExonRegion	0	111.31	131.97	177.06	181.53	157.82	170.75	92.79
48	E12_Db	KnownBoundary	0	46.03	47.95	85.53	103.49	45.83	102.29	36.23
49	ER12c	ExonRegion	0	65.52	95.58	98.96	129.96	74.91	141.20	65.60
50	ER13a	ExonRegion	0	46.60	47.88	90.36	49.27	62.25	83.71	27.13
51	E13a_E14a	KnownJunction	0	6.99	4.26	15.98	18.67	37.14	12.46	8.51
52	E13a_E14b	KnownJunction	0	0.00	0.00	0.76	1.35	0.00	0.00	0.00
53	ER14a	ExonRegion	0	20.04	16.08	35.74	24.63	31.83	35.89	12.59
54	E14_Ab	KnownBoundary	0	23.95	21.52	31.54	28.04	24.69	45.53	12.31
55	ER14b	ExonRegion	0	11.99	20.52	23.09	27.86	23.97	34.89	9.72
56	E14a_E15a	KnownJunction	0	25.94	50.20	57.37	68.35	46.15	75.39	27.86
57	ER15a	ExonRegion	0	25.76	46.61	60.44	66.83	61.67	70.47	31.36
58	ER15b	ExonRegion	0	28.02	27.54	66.52	40.93	59.81	54.33	25.50