Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	CACNA1C	Gene	0	0.39	0.13	52.63	37.30	3.42	9.36	0.29
2	399655	Transcript	0	0.00	1.04	34.67	38.40	2.14	14.88	0.00
3	399595	Transcript	0	0	0	0	0	0	0	0
4	399649	Transcript	0	0	0	0	0	0	0	0
5	399629	Transcript	0	0	0	0	0	0	0	0
6	399644	Transcript	0	0	0	0	0	0	0	0
7	399601	Transcript	0	0	0	0	0	0	0	0
8	399606	Transcript	0	0	0	0	0	0	0	0
9	399637	Transcript	0	0	0	0	0	0	0	0
10	347598	Transcript	0	0	0	0	0	0	0	0
11	399641	Transcript	0	0	0	0	0	0	0	0
12	399621	Transcript	0	0	0	0	0	0	0	0
13	344100	Transcript	0	0	0	0	0	0	0	0
14	399597	Transcript	0	0	0	0	0	0	0	0
15	327702	Transcript	0	0	0	0	0	0	0	0
16	399591	Transcript	0	0	0	0	0	0	0	0
17	399638	Transcript	0	0	0	0	0	0	0	0
18	399634	Transcript	0	0	0	0	0	0	0	0
19	399617	Transcript	0	0	0	0	0	0	0	0
20	399603	Transcript	0	0	0	0	0	0	0	0
21	405596	Transcript	0	0	0	0	0	0	0	0
22	402845	Transcript	0	0	0	0	0	0	0	0
23	406454	Transcript	0	0	0	0	0	0	0	0
24	399589	Transcript	0	0	0	0	0	0	0	0
25	335762	Transcript	0	0.00	0.57	46.30	36.98	1.30	6.58	0.00
26	322367	Transcript	0	0.00	0.00	0.65	0.00	1.04	0.00	0.00
27	399585	Transcript	0	0	0	0	0	0	0	0
28	382698	Transcript	0	0.00	0.00	7.13	3.45	0.00	0.00	0.00
29	ER1a	ExonRegion	0	0.00	1.04	34.67	38.40	2.14	14.88	0.00
30	E1_Ab	KnownBoundary	0	0.00	0.00	25.95	32.86	3.09	15.54	0.00
31	ER1b	ExonRegion	0	0.00	0.00	37.26	34.34	5.23	12.44	0.46
32	E1a_E2b	KnownJunction	0	0.00	0.00	53.86	35.00	4.82	12.19	0.89
33	ER2a	ExonRegion	0	0.00	0.00	26.42	22.45	2.02	5.52	0.34
34	ER2b	ExonRegion	0	0.20	0.00	48.36	43.14	3.23	9.83	0.25
35	E2a_E3a	KnownJunction	0	0.63	0.00	152.73	74.47	8.16	18.04	0.00
36	ER3a	ExonRegion	0	0.50	0.00	140.23	77.54	6.17	19.33	0.02
37	E3a_E4b	KnownJunction	0	0.00	0.00	80.40	49.98	4.52	8.12	0.00
38	I3_SR7	SilentIntronRegion	0	0.40	0.00	13.58	1.86	0.36	0.08	0.00
39	I3_AR17	ActiveIntronRegion	0	0.00	0.00	13.97	6.70	0.24	6.23	0.00
40	I3_AR18	ActiveIntronRegion	0	0.00	0.00	18.73	5.83	0.00	4.10	0.00
41	I3_AR19	ActiveIntronRegion	0	0.44	0.00	18.77	4.28	0.00	1.58	0.00
42	I3_AR20	ActiveIntronRegion	0	0.28	0.00	21.28	4.18	1.48	2.67	0.00
43	I3_SR13	SilentIntronRegion	0	0.03	0.00	14.13	9.78	1.22	3.69	0.09
44	I3_AR42	ActiveIntronRegion	0	0.00	0.00	11.34	9.09	0.52	0.99	0.11
45	ER4a	ExonRegion	0	0.00	0.00	14.56	7.90	0.54	1.23	0.11
46	ER4b	ExonRegion	0	0.01	0.00	95.04	42.33	5.36	6.91	0.35
47	E4a_E5a	KnownJunction	0	0.00	0.00	75.04	42.51	3.11	6.86	0.00
48	ER5a	ExonRegion	0	0.41	0.00	50.78	38.65	3.77	7.39	0.72
49	E5a_E6a	KnownJunction	0	0.00	0.00	36.73	37.33	7.72	7.37	0.00
50	ER6a	ExonRegion	0	0.36	0.00	43.63	43.93	5.10	9.58	0.50
51	E6a_E7a	KnownJunction	0	0.00	0.00	12.66	15.77	2.28	8.17	0.89
52	ER7a	ExonRegion	0	0.30	0.00	49.05	47.49	4.63	9.45	0.51
53	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
54	E7a_E9a	KnownJunction	0	0.00	0.00	46.14	46.33	2.19	11.18	0.89
55	E7a_E10a	NovelJunction	0	0.00	0.00	3.46	20.97	0.00	6.38	0.00
56	E7a_E12a	KnownJunction	0	0.00	0.00	0.65	0.00	1.04	0.00	0.00
57	ER8a	ExonRegion	0	0.00	0.00	4.60	0.00	0.79	0.00	0.00
58	E8a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
59	ER9a	ExonRegion	0	0.42	0.00	67.40	38.86	4.38	9.22	0.97
60	E9a_E10a	KnownJunction	0	0.83	0.00	79.11	45.40	6.71	9.81	0.89
61	ER10a	ExonRegion	0	0.76	0.36	67.68	44.28	3.80	14.17	0.72
62	E10a_E11a	KnownJunction	0	0.00	1.37	31.26	27.82	0.97	10.34	0.00
63	E10a_E12a	KnownJunction	0	0.00	0.00	30.61	18.10	6.43	6.00	0.57
64	ER11a	ExonRegion	0	0.00	0.34	51.20	38.34	1.77	8.06	0.00
65	E11a_E12a	KnownJunction	1	0.00	0.00	56.43	44.78	1.18	1.34	0.00
66	ER12a	ExonRegion	0	0.95	0.00	78.06	51.80	5.49	10.75	0.07
67	E12a_E13a	KnownJunction	0	0.00	0.00	7.20	4.14	0.00	0.00	0.00
68	E12a_E14a	KnownJunction	0	1.74	0.00	47.67	49.39	3.41	7.61	0.00
69	ER13a	ExonRegion	0	0.00	0.00	7.39	4.52	0.00	0.00	0.00
70	E13a_E14a	KnownJunction	0	0.00	0.00	6.80	1.68	0.00	0.00	0.00
71	ER14a	ExonRegion	0	1.68	0.00	48.85	51.17	4.08	7.95	0.00
72	ER15a	ExonRegion	0	0.88	0.00	58.56	51.68	8.30	6.50	0.00
73	E15a_E16a	KnownJunction	1	2.94	0.00	73.69	46.43	8.83	4.50	0.00
74	ER16a	ExonRegion	1	0.86	0.00	83.74	76.58	7.57	6.69	0.00
75	E16a_E17a	KnownJunction	1	0.00	0.00	94.73	71.25	7.63	6.86	0.00
76	ER17a	ExonRegion	0	0.00	0.44	86.73	73.27	4.10	9.69	0.00
77	E17a_E18a	KnownJunction	0	0.00	0.00	58.20	41.69	3.11	7.80	0.00
78	ER18a	ExonRegion	0	0.00	0.00	51.35	56.64	3.26	9.44	0.33
79	E18a_E19a	KnownJunction	0	0.00	0.97	99.23	61.01	3.27	10.69	0.67
80	ER19a	ExonRegion	0	0.00	0.00	89.00	56.59	5.15	12.40	0.10
81	E19a_E20a	KnownJunction	0	0.00	0.00	61.63	39.93	4.31	15.97	0.00
82	E20_Aa	NovelBoundary	0	0.00	0.00	27.35	15.82	2.58	7.29	0.00
83	ER20a	ExonRegion	0	0.36	0.15	55.65	34.60	3.92	11.69	0.42
84	E20a_E21a	KnownJunction	0	0.85	1.21	86.65	53.40	9.15	12.76	0.00
85	ER21a	ExonRegion	0	0.22	1.06	92.16	51.30	7.43	12.03	0.00
86	E21a_E22a	KnownJunction	0	0.00	0.00	87.24	42.26	8.39	8.63	0.00
87	ER22a	ExonRegion	0	0.43	0.65	114.96	43.70	8.09	12.08	0.00
88	E22a_E23a	KnownJunction	0	0.00	0.00	96.87	39.63	16.34	6.57	0.00
89	ER23a	ExonRegion	0	0.00	0.05	102.00	49.45	5.69	13.92	0.00
90	E23a_E24a	KnownJunction	0	0.00	0.00	130.27	46.05	7.26	12.57	0.00
91	E23a_E25a	KnownJunction	0	0.00	0.00	1.21	0.00	0.00	0.00	0.00
92	ER24a	ExonRegion	0	0.23	0.00	138.19	65.11	8.83	13.89	0.00
93	E24a_E25a	KnownJunction	0	0.00	0.00	0.00	0.00	1.11	0.00	0.00
94	E24a_E26a	KnownJunction	0	0.82	0.00	126.36	72.79	7.63	11.66	0.00
95	ER25a	ExonRegion	0	0.00	0.00	3.35	4.84	0.86	0.00	0.00
96	E25a_E26a	KnownJunction	0	0.00	0.00	3.12	5.23	0.00	0.00	0.00
97	ER26a	ExonRegion	0	2.05	0.00	102.44	53.43	8.40	18.44	0.00
98	E26a_E27a	KnownJunction	0	0.00	0.00	92.23	52.67	3.37	17.80	0.00
99	ER27a	ExonRegion	0	0.54	0.00	95.58	58.72	4.30	13.97	0.00
100	E27a_E28a	KnownJunction	0	2.00	0.00	106.33	74.26	7.52	29.27	0.00
101	ER28a	ExonRegion	0	2.04	0.00	93.59	76.35	8.85	22.31	0.16
102	E28a_E29a	KnownJunction	0	1.03	0.00	67.47	70.36	7.70	11.01	0.80
103	ER29a	ExonRegion	0	0.93	0.00	82.97	76.79	4.23	15.73	1.03
104	E29a_E30a	KnownJunction	0	1.03	0.00	82.66	68.97	2.35	14.45	0.87
105	ER30a	ExonRegion	0	0.22	0.63	71.19	66.23	4.22	10.28	0.65
106	E30a_E31a	KnownJunction	0	0.00	0.00	70.41	69.98	10.67	19.91	1.36
107	E31_Aa	NovelBoundary	1	0.00	1.50	2.37	11.08	0.00	0.00	0.00
108	ER31a	ExonRegion	0	0.29	0.46	66.00	74.08	3.88	12.56	0.77
109	E31a_E32a	KnownJunction	0	0.00	0.00	80.39	67.38	4.22	15.28	1.40
110	ER32a	ExonRegion	0	0.37	0.00	76.78	78.86	6.14	11.84	1.03
111	E32a_E33a	KnownJunction	0	0.00	0.00	97.47	90.40	8.32	18.52	2.18
112	E33_Aa	NovelBoundary	0	0.00	0.00	33.55	1.46	0.00	0.00	0.00
113	ER33a	ExonRegion	0	1.09	0.00	103.79	91.84	6.59	12.26	0.24
114	E33a_E34a	KnownJunction	1	1.25	0.00	94.89	70.87	9.54	6.46	0.00
115	E33a_E35a	KnownJunction	0	0.00	0.00	22.36	16.47	1.18	2.73	0.00
116	E34_Aa	NovelBoundary	0	0.00	0.00	16.35	12.43	0.92	1.10	0.00
117	ER34a	ExonRegion	0	0.65	0.00	105.00	62.79	7.01	7.79	1.22
118	E34_Da	NovelBoundary	1	0.00	0.00	21.74	22.76	6.16	0.00	0.00
119	E34a_E35a	KnownJunction	0	0.00	0.00	41.01	13.79	0.95	1.02	0.00
120	E34a_E36a	KnownJunction	0	0.00	0.00	33.08	24.06	1.18	5.92	0.00
121	E34a_E37b	NovelJunction	1	0.00	0.00	24.49	23.76	2.12	0.00	0.00
122	ER35a	ExonRegion	0	0.44	0.00	63.54	39.25	2.87	8.38	0.00
123	E35_Da	NovelBoundary	0	0.00	1.16	27.17	23.19	0.00	3.97	0.00
124	E35a_E37b	KnownJunction	0	0.00	0.00	1.15	0.00	0.00	0.00	0.00
125	E35b_E36a	KnownJunction	0	1.95	0.00	28.98	16.61	0.99	4.66	0.00
126	E35b_E37b	KnownJunction	0	0.00	0.00	18.57	13.79	0.00	1.07	0.00
127	ER35b	ExonRegion	0	1.54	0.00	49.56	30.76	1.62	9.81	0.45
128	I35	Intron	0	0.27	0.07	15.96	6.71	0.97	1.50	0.02
129	I35_AR1	ActiveIntronRegion	0	0.00	0.00	8.13	8.39	0.98	1.78	0.00
130	I35_SR1	SilentIntronRegion	0	0.00	0.00	10.30	15.87	2.11	2.09	0.00
131	I35_AR2	ActiveIntronRegion	0	0.00	0.00	12.67	9.85	2.06	4.95	0.00
132	I35_AR3	ActiveIntronRegion	0	0.00	0.34	5.72	8.28	0.71	1.29	0.00
133	I35_SR3	SilentIntronRegion	0	0.18	0.08	13.90	5.91	0.69	1.08	0.00
134	I35_SR5	SilentIntronRegion	0	0.53	0.09	20.13	6.71	0.91	1.60	0.03
135	I35_AR8	ActiveIntronRegion	0	0.37	0.00	16.96	7.60	0.27	1.14	0.00
136	I35_SR6	SilentIntronRegion	0	0.77	0.00	20.63	4.88	0.83	0.93	0.00
137	I35_AR9	ActiveIntronRegion	0	0.25	0.09	19.76	4.97	1.32	0.89	0.00
138	I35_AR10	ActiveIntronRegion	0	0.44	0.00	19.19	2.11	0.45	0.00	0.00
139	I35_SR7	SilentIntronRegion	0	0.21	0.00	17.43	7.04	1.45	0.54	0.05
140	E36_Aa	NovelBoundary	0	0.00	0.00	16.41	4.63	1.15	0.00	0.00
141	ER36a	ExonRegion	0	2.28	0.00	66.14	39.87	7.78	12.33	0.67
142	E36_Da	NovelBoundary	1	0.00	0.00	19.69	14.47	2.95	0.00	0.00
143	E36a_E37a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
144	E36a_E37b	KnownJunction	0	1.03	0.00	41.67	22.38	10.63	8.04	0.89
145	I36	Intron	0	0.08	0.34	14.43	7.23	0.93	1.17	0.03
146	I36_SR1	SilentIntronRegion	0	0.09	0.33	13.87	6.00	0.92	0.85	0.04
147	I36_AR1	ActiveIntronRegion	0	0.00	0.36	17.23	13.33	0.97	2.75	0.00
148	E37_Aa	NovelBoundary	0	0.00	0.00	15.36	4.69	4.36	0.00	0.00
149	ER37a	ExonRegion	0	0.03	0.00	6.84	8.45	1.11	0.20	0.01
150	E37_Ab	KnownBoundary	1	0.00	0.00	9.44	14.11	1.15	0.00	0.00
151	ER37b	ExonRegion	0	0.77	0.00	85.47	51.25	8.07	10.49	0.62
152	E37a_E38a	KnownJunction	1	0.80	0.00	90.98	52.99	9.54	5.31	1.61
153	E38_Aa	NovelBoundary	0	0.00	0.00	46.01	25.90	3.57	3.22	0.57
154	ER38a	ExonRegion	0	1.29	0.00	78.06	53.85	9.20	14.93	1.02
155	E38a_E39a	KnownJunction	0	1.70	0.00	79.48	66.73	14.64	23.34	0.85
156	ER39a	ExonRegion	0	0.48	0.00	106.17	66.24	11.60	17.00	1.05
157	E39a_E40a	KnownJunction	0	0.00	0.00	100.94	62.77	6.57	15.62	0.75
158	ER40a	ExonRegion	0	0.94	0.00	108.48	66.77	10.23	19.65	0.85
159	E40a_E41a	KnownJunction	0	0.00	0.00	87.07	67.62	13.62	16.27	0.00
160	ER41a	ExonRegion	0	1.64	0.00	110.57	68.48	7.07	17.45	0.56
161	E41a_E42a	KnownJunction	0	0.60	0.00	97.14	52.83	10.12	13.08	1.48
162	ER42a	ExonRegion	0	0.17	0.95	67.14	58.26	7.53	19.86	0.32
163	E42a_E43a	KnownJunction	0	0.80	0.00	102.93	91.97	11.07	16.75	0.00
164	E43_Aa	NovelBoundary	0	0.00	1.52	1.51	2.79	11.80	2.44	0.00
165	ER43a	ExonRegion	0	0.44	0.00	95.14	73.92	14.04	20.82	0.50
166	E43a_E44a	KnownJunction	0	0.00	0.00	7.57	5.55	0.00	6.38	0.00
167	E43a_E44b	KnownJunction	0	0.00	0.00	72.12	58.63	7.22	23.85	0.00
168	ER44a	ExonRegion	0	0.13	0.00	10.30	12.06	0.17	6.60	0.00
169	E44_Ab	KnownBoundary	0	0.67	0.00	11.30	13.98	0.00	7.50	0.00
170	ER44b	ExonRegion	0	0.50	0.00	88.73	68.35	7.86	22.19	0.17
171	E44a_E45a	KnownJunction	0	0.00	0.00	88.18	65.91	8.48	13.64	0.82
172	ER45a	ExonRegion	0	0.00	0.64	83.85	63.29	9.55	14.24	0.66
173	E45a_E46a	KnownJunction	0	0.00	1.05	85.98	73.04	8.00	12.57	0.00
174	E45a_E47a	NovelJunction	0	0.85	0.00	3.26	9.94	0.00	5.36	0.00
175	ER46a	ExonRegion	0	0.29	0.13	83.70	62.60	8.35	8.75	0.40
176	E46a_E47a	KnownJunction	0	0.00	0.00	113.01	64.40	3.46	14.63	1.13
177	ER47a	ExonRegion	0	0.39	1.03	58.73	49.47	3.22	15.69	0.86
178	E47a_E48a	KnownJunction	0	0.00	0.00	5.56	9.13	0.00	0.00	0.00
179	E47a_E49a	KnownJunction	0	0.00	0.00	1.78	1.16	0.00	0.00	0.00
180	E47a_E50a	KnownJunction	0	0.00	0.00	41.16	16.85	0.95	10.83	0.00
181	ER48a	ExonRegion	0	0.00	0.00	7.96	13.31	0.75	1.95	0.00
182	E48a_E50a	KnownJunction	0	0.00	0.00	3.28	4.50	0.00	1.66	0.00
183	I48	Intron	0	0.05	0.14	9.61	9.21	0.73	1.81	0.00
184	I48_SR1	SilentIntronRegion	0	0.05	0.14	9.63	9.22	0.73	1.81	0.00
185	E49_Aa	NovelBoundary	0	0.00	0.00	10.29	14.41	0.00	2.73	0.00
186	ER49a	ExonRegion	0	0.00	0.00	5.55	6.86	1.10	2.28	0.00
187	E49_Da	NovelBoundary	0	0.00	0.00	13.28	18.75	2.21	1.26	0.59
188	E49a_E50a	KnownJunction	0	0.00	0.00	0.82	2.93	0.90	1.66	0.00
189	E50_Aa	NovelBoundary	0	1.54	1.23	17.55	21.84	4.70	4.53	0.00
190	ER50a	ExonRegion	0	1.11	0.00	69.53	64.76	6.54	19.72	0.31
191	E50_Da	NovelBoundary	0	0.00	0.00	18.78	1.16	0.00	0.00	0.56
192	E50a_E51a	KnownJunction	0	1.74	0.00	69.04	61.58	5.26	28.03	0.69
193	I50_AR1	ActiveIntronRegion	0	0.00	0.00	14.66	10.15	0.00	1.23	0.00
194	I50_AR2	ActiveIntronRegion	0	0.17	0.52	15.31	5.19	0.50	3.36	0.11
195	ER51a	ExonRegion	0	0.57	0.05	115.20	81.09	8.50	31.59	0.69
196	E51a_E52a	KnownJunction	0	1.03	0.00	127.21	101.00	7.26	30.69	1.59
197	ER52a	ExonRegion	0	2.16	0.84	83.58	76.66	6.90	30.67	0.36
198	E52a_E53a	KnownJunction	0	1.77	0.00	60.05	72.52	4.43	21.09	0.00
199	ER53a	ExonRegion	0	0.18	0.28	34.35	38.05	2.99	12.57	0.12
200	E53a_E54a	KnownJunction	0	0.00	0.00	35.28	28.82	1.11	11.26	0.70
201	ER54a	ExonRegion	0	0.39	0.02	34.82	32.49	3.70	10.51	0.21
202	E54_Da	KnownBoundary	0	0.00	0.00	35.55	31.26	1.15	11.93	0.00
203	ER54b	ExonRegion	0	0.00	0.90	30.81	35.67	1.95	15.23	0.00
204	E54_Db	KnownBoundary	0	0.00	0.00	28.87	34.00	0.88	13.00	0.00
205	ER54c	ExonRegion	0	0.43	0.11	28.00	25.41	1.70	8.65	0.18
206	E54_Dc	KnownBoundary	0	0.00	0.00	90.86	44.02	16.07	15.73	0.00
207	ER54d	ExonRegion	0	0.45	0.00	79.40	35.72	4.51	9.20	0.19
208	E54_Dd	KnownBoundary	0	0.00	0.00	38.93	13.36	1.18	1.50	0.00
209	ER54e	ExonRegion	0	0.26	0.04	32.29	19.30	0.95	5.33	0.23