Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	PRB4	Gene	0	0.48	0.21	0.73	1.50	0.21	0.05	9.05
2	389362	Transcript	0	0.00	0.23	0.23	0.00	0.19	0.00	0.93
3	240636	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	381832	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	1.69
5	396378	Transcript	0	0.27	0.00	0.20	0.00	0.00	0.00	0.89
6	341768	Transcript	0	0.06	0.22	0.27	0.00	0.55	0.49	3.34
7	396379	Transcript	0	0.01	0.00	0.00	0.00	0.00	0.00	2.05
8	381838	Transcript	0	1.38	0.30	1.22	5.74	2.28	0.00	0.73
9	279575	Transcript	0	0.39	0.20	0.74	0.23	0.14	0.00	0.44
10	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	1.35
11	ER1b	ExonRegion	0	0.00	0.00	0.50	0.00	0.00	0.00	35.75
12	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	ER2a	ExonRegion	0	0.00	0.00	0.00	0.10	0.00	0.00	0.84
14	E2a_E3b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	E2a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
16	ER3a	ExonRegion	0	0.36	0.00	0.80	0.02	0.44	0.00	18.64
17	E3_Ab	KnownBoundary	0	0.97	0.00	2.36	0.00	1.18	1.26	27.79
18	ER3b	ExonRegion	0	0.62	0.00	0.88	0.74	0.46	0.23	24.84
19	E3_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
20	E3a_E3c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	ER3c	ExonRegion	0	0.00	0.00	0.43	0.00	0.27	1.08	17.13
22	E3_Db	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
23	E3_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	E3b_E3d	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
25	ER3d	ExonRegion	0	0.00	0.00	0.68	0.00	0.81	0.00	20.24
26	ER3e	ExonRegion	0	0.00	1.01	0.19	0.00	0.54	0.00	14.38
27	E3_Dc	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	E3c_E3d	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
29	ER3f	ExonRegion	0	0.00	0.97	0.58	0.00	0.00	0.00	26.71
30	E3_Ad	KnownBoundary	0	0.00	0.00	0.76	0.00	0.00	0.00	15.48
31	ER3g	ExonRegion	0	0.00	0.00	0.23	0.00	0.00	0.00	11.42
32	E3_Dd	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
33	E3d_E7b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
34	ER3h	ExonRegion	0	0.28	0.00	0.35	1.16	0.00	0.00	2.30
35	E3_De	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
36	E3e_E3e	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
37	ER3i	ExonRegion	0	0.65	0.00	1.07	4.83	0.00	0.00	21.52
38	E3_Ae	KnownBoundary	0	2.62	0.00	1.52	0.00	1.98	0.00	26.80
39	ER3j	ExonRegion	0	0.33	0.00	0.07	0.00	0.00	0.00	11.15
40	E3_Df	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	9.32
41	E3f_E3f	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
42	ER3k	ExonRegion	0	0.77	0.00	0.00	0.00	0.00	0.00	13.89
43	E3_Af	KnownBoundary	0	0.67	0.00	0.89	0.00	3.43	0.00	39.17
44	ER3l	ExonRegion	0	0.06	0.00	0.00	1.47	0.00	0.00	2.08
45	E3_Dg	KnownBoundary	0	0.00	0.00	1.71	40.64	0.00	0.00	36.13
46	E3g_E3g	KnownJunction	0	0.00	1.34	0.80	0.00	2.86	2.95	1.38
47	ER3m	ExonRegion	0	0.58	0.00	0.00	1.62	0.00	0.00	5.11
48	E3_Ag	KnownBoundary	0	0.00	0.00	1.90	0.00	0.00	0.00	13.61
49	ER3n	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
50	E3_Dh	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
51	ER3o	ExonRegion	0	0.00	0.11	0.00	0.00	0.00	0.00	0.08
52	E3i_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
53	ER4a	ExonRegion	0	0.00	0.81	0.93	0.00	0.75	0.00	2.29
54	E5_Aa	NovelBoundary	0	11.18	2.97	18.47	7.45	6.66	2.89	61.45
55	ER5a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	3.52
56	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
57	ER6a	ExonRegion	0	0.06	0.00	0.00	0.00	0.00	0.00	6.75
58	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
59	ER7a	ExonRegion	0	1.01	0.00	0.02	0.00	0.00	0.00	9.61
60	E7_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	9.01
61	ER7b	ExonRegion	0	0.54	0.08	0.95	0.00	0.00	0.00	29.62
62	E7_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	4.93
63	E7_Da	KnownBoundary	0	2.55	3.10	4.28	1.68	1.18	0.00	49.26
64	E7a_E7g	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
65	ER7c	ExonRegion	0	0.77	1.21	0.68	0.00	0.00	0.00	8.34
66	ER7d	ExonRegion	0	0.47	1.21	0.57	0.00	0.00	0.00	9.46
67	E7_Db	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
68	E7b_E7d	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
69	ER7e	ExonRegion	0	0.69	0.16	0.00	0.00	0.00	0.00	5.00
70	E7_Dc	KnownBoundary	0	0.88	0.00	0.00	0.00	0.00	0.00	2.58
71	E7c_E7e	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	3.38
72	ER7f	ExonRegion	0	0.28	0.00	0.00	0.00	0.00	0.00	1.43
73	E7_Ad	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
74	ER7g	ExonRegion	0	0.00	0.00	0.22	0.00	0.00	0.32	1.26
75	E7_Dd	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
76	E7d_E7f	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
77	ER7h	ExonRegion	0	0.54	0.00	0.61	0.00	0.00	0.00	1.24
78	E7_Ae	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
79	ER7i	ExonRegion	0	0.42	0.00	0.00	0.00	0.00	0.02	4.53
80	E7_Af	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.89
81	ER7j	ExonRegion	0	0.60	0.00	0.29	2.30	0.45	1.15	28.77
82	E7_Ag	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
83	ER7k	ExonRegion	0	0.04	0.00	0.65	2.77	0.22	0.00	22.07
84	E7_De	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	6.84
85	E7e_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
86	ER7l	ExonRegion	0	0.00	0.00	0.92	1.11	0.37	0.00	11.07
87	E7_Df	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
88	ER7m	ExonRegion	0	0.00	0.00	0.06	0.11	0.00	0.00	3.88
89	E7g_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
90	ER8a	ExonRegion	0	0.00	0.00	0.77	0.00	0.39	0.00	3.23
91	E8_Da	NovelBoundary	0	11.05	1.18	1.98	0.00	0.00	0.00	5.25
92	E9_Aa	NovelBoundary	0	2.99	0.00	0.89	0.00	1.18	0.00	7.94
93	ER9a	ExonRegion	0	1.19	0.00	2.05	0.93	0.42	0.00	1.01
94	E9a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
95	ER10a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
96	E10a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
97	ER11a	ExonRegion	0	0.87	0.89	2.33	3.15	0.63	0.00	0.87
98	E11_Da	KnownBoundary	0	3.40	0.00	2.59	22.97	2.35	0.00	1.32
99	E11a_E11b	KnownJunction	0	5.51	1.18	4.87	22.97	9.11	0.00	2.92
100	ER11b	ExonRegion	0	0.77	0.02	0.60	0.94	0.00	0.00	1.86
101	E11_Ab	KnownBoundary	0	0.77	0.00	1.42	0.00	0.00	0.00	0.85
102	ER11c	ExonRegion	0	1.47	0.04	1.16	8.02	0.21	0.00	1.46
103	E11c_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
104	ER11d	ExonRegion	0	0.17	0.00	0.38	0.00	0.00	0.00	0.67
105	ER12a	ExonRegion	0	0.98	1.58	2.90	0.00	0.71	0.00	0.00