Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	ARFGAP2	Gene	0	127.77	140.96	125.21	129.82	149.14	108.41	128.77
2	395449	Transcript	0	23.97	16.97	28.47	23.82	36.22	13.77	15.86
3	319543	Transcript	0	212.55	171.66	172.82	183.24	239.27	146.50	189.09
4	ER1a	ExonRegion	0	69.01	49.69	83.11	69.46	108.28	39.48	44.73
5	ER1b	ExonRegion	0	151.70	111.94	156.57	134.69	196.63	97.65	119.09
6	E1a_E2a	KnownJunction	0	69.13	60.42	34.12	57.51	21.67	76.78	59.79
7	ER2a	ExonRegion	0	96.09	115.62	92.78	92.78	41.28	93.54	85.24
8	E2a_E3a	KnownJunction	0	303.26	108.45	275.54	117.74	112.96	103.05	177.31
9	E2a_E4a	NovelJunction	0	19.88	7.30	1.49	8.80	0.00	4.05	0.86
10	ER3a	ExonRegion	0	225.32	107.74	209.13	114.64	282.70	108.48	174.46
11	E3a_E4a	KnownJunction	0	141.85	122.21	121.08	110.99	265.78	95.33	150.48
12	ER4a	ExonRegion	0	117.89	141.04	114.08	102.95	112.52	92.64	119.25
13	E4a_E5a	KnownJunction	0	143.38	131.46	125.27	118.66	108.14	74.42	146.21
14	ER5a	ExonRegion	0	131.28	116.50	124.68	100.74	107.88	73.41	136.28
15	E5a_E6a	KnownJunction	0	64.54	83.94	60.70	54.43	64.71	42.48	56.52
16	E5a_E8a	NovelJunction	0	7.66	14.06	3.91	7.80	2.28	9.51	0.77
17	E5a_E9a	NovelJunction	0	0.00	10.38	0.00	5.15	0.00	4.13	0.00
18	I5_AR2	ActiveIntronRegion	0	27.67	20.36	13.98	6.92	5.61	6.45	5.06
19	ER6a	ExonRegion	0	40.71	73.05	40.38	47.00	70.29	37.09	50.83
20	E6a_E7a	KnownJunction	0	69.03	66.68	63.65	45.68	92.00	27.07	84.08
21	ER7a	ExonRegion	0	38.07	68.39	44.65	51.43	90.05	36.26	47.16
22	E7a_E8a	KnownJunction	0	22.05	68.83	26.89	48.25	68.72	44.62	30.54
23	ER8a	ExonRegion	0	47.27	92.56	47.98	59.69	82.57	50.54	54.68
24	E8a_E9a	KnownJunction	0	70.55	116.20	69.91	64.75	94.22	49.42	81.88
25	ER9a	ExonRegion	0	73.61	118.93	79.13	109.23	113.28	90.87	98.16
26	E9a_E10a	KnownJunction	0	90.31	132.36	133.97	143.83	170.34	90.82	122.30
27	ER10a	ExonRegion	0	170.64	144.03	171.87	151.93	171.18	141.06	144.06
28	E10_Da	NovelBoundary	1	33.83	44.53	24.24	21.56	10.42	15.09	9.57
29	E10a_E11a	KnownJunction	0	119.40	146.10	148.80	147.27	193.44	126.87	166.00
30	I10_SR1	SilentIntronRegion	0	26.29	11.68	24.67	8.27	16.97	6.83	7.05
31	E11_Aa	NovelBoundary	1	50.74	33.18	31.28	13.00	21.32	25.81	9.85
32	ER11a	ExonRegion	0	197.64	188.63	196.82	155.78	206.24	149.94	170.30
33	E11_Da	NovelBoundary	1	58.60	34.44	21.87	12.03	5.19	7.13	4.34
34	E11a_E12a	KnownJunction	0	191.30	181.80	191.60	137.22	170.71	123.76	148.86
35	E12_Aa	NovelBoundary	1	41.91	21.81	19.99	13.33	11.57	6.94	4.16
36	ER12a	ExonRegion	0	132.00	157.71	157.65	134.21	182.97	100.48	128.69
37	E12a_E13a	KnownJunction	0	109.89	126.08	117.59	103.95	133.61	94.74	113.30
38	ER13a	ExonRegion	0	96.01	123.66	113.73	105.45	153.11	100.07	107.57
39	E13a_E14a	KnownJunction	0	104.35	93.11	121.62	108.26	144.77	72.63	102.93
40	ER14a	ExonRegion	0	185.11	153.02	145.70	153.89	233.69	139.87	152.00
41	E14a_E15a	KnownJunction	0	220.42	169.98	166.98	180.43	228.57	143.46	199.46
42	ER15a	ExonRegion	0	236.54	215.71	182.09	204.51	269.59	147.84	210.50
43	E15a_E17a	KnownJunction	0	303.11	192.54	225.08	222.55	336.50	175.86	241.97
44	ER15b	ExonRegion	0	2.79	1.21	2.09	1.81	0.37	1.67	2.58
45	ER16a	ExonRegion	0	0.11	0.00	0.19	0.18	0.00	0.18	0.29
46	ER17a	ExonRegion	0	122.00	150.78	120.56	143.93	142.03	117.14	136.20