Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	CRY2	Gene	0	56.89	313.64	29.79	186.17	32.13	397.49	39.00
2	263762	Transcript	0	48.63	317.74	27.62	176.86	27.39	392.26	35.98
3	ER1a	ExonRegion	0	10.22	130.02	4.66	79.09	3.91	159.05	7.69
4	E1a_E2a	KnownJunction	0	56.63	224.38	26.83	186.33	13.79	380.74	32.78
5	ER2a	ExonRegion	0	43.69	267.97	19.36	150.40	26.01	402.25	29.76
6	E2a_E3a	KnownJunction	0	33.08	328.42	20.68	169.86	21.19	480.81	29.77
7	E2a_E4a	NovelJunction	1	0.00	3.60	1.55	0.00	0.00	11.18	0.00
8	ER3a	ExonRegion	0	58.91	431.33	30.57	206.05	22.89	556.17	37.55
9	E3a_E4a	KnownJunction	0	66.44	474.91	27.91	207.60	30.78	627.11	43.68
10	ER4a	ExonRegion	0	61.17	405.49	35.63	196.33	31.28	513.30	46.03
11	E4a_E5a	KnownJunction	0	46.78	312.13	21.86	144.34	23.58	349.20	31.92
12	E4a_E6a	NovelJunction	1	5.77	32.47	2.83	29.99	0.00	108.49	0.80
13	I4_AR2	ActiveIntronRegion	0	16.46	23.14	7.03	5.52	0.91	9.64	2.53
14	E5_Aa	NovelBoundary	1	17.31	22.07	6.18	4.90	1.89	17.29	0.00
15	ER5a	ExonRegion	0	48.33	320.45	29.69	158.74	30.38	330.33	39.01
16	E5_Da	NovelBoundary	1	18.39	19.91	5.19	5.01	0.00	12.81	1.38
17	E5a_E6a	KnownJunction	0	42.58	338.67	42.02	203.16	36.61	444.50	49.07
18	I5_AR2	ActiveIntronRegion	0	14.94	11.05	4.74	3.45	0.38	7.78	1.77
19	E6_Aa	NovelBoundary	1	15.79	28.77	6.74	1.68	1.13	16.91	1.69
20	ER6a	ExonRegion	0	44.53	313.89	28.32	158.22	22.07	359.93	30.84
21	E6a_E7a	KnownJunction	0	35.90	314.26	26.02	151.47	18.35	311.47	30.40
22	ER7a	ExonRegion	0	39.90	308.54	27.69	167.76	21.01	357.81	30.29
23	E7a_E8a	KnownJunction	0	43.73	241.51	29.78	155.80	27.87	305.41	31.59
24	ER8a	ExonRegion	0	42.87	319.28	33.32	174.21	31.34	381.08	37.02
25	E8a_E9a	KnownJunction	0	50.64	356.90	34.66	186.55	24.55	455.27	41.07
26	E9_Aa	NovelBoundary	1	21.45	2.94	10.06	1.44	0.00	0.00	0.00
27	ER9a	ExonRegion	0	61.99	402.05	38.50	226.70	38.23	450.15	49.19
28	E9a_E10a	KnownJunction	0	47.65	328.45	26.76	198.93	23.35	333.01	36.67
29	E9a_E11a	NovelJunction	1	0.00	2.84	0.00	2.63	0.00	15.22	1.39
30	ER10a	ExonRegion	0	53.83	318.87	25.06	190.36	24.30	371.16	33.88
31	E10a_E11a	KnownJunction	0	73.20	326.90	32.25	209.63	55.42	426.63	48.71
32	ER11a	ExonRegion	0	49.67	268.06	23.50	188.81	34.32	312.55	38.52
33	E11a_E12a	KnownJunction	0	40.72	261.35	18.12	159.05	31.01	299.49	28.88
34	ER12a	ExonRegion	0	65.99	314.13	32.18	198.42	37.68	414.52	43.16
35	IG38	Intergenic	0	4.01	6.68	1.39	6.13	0.19	12.12	0.75
36	IG38_SR1	SilentIntergenicRegion	0	4.12	6.87	1.44	6.31	0.19	12.52	0.77