Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	AC123788.7	Gene	0	2.20	2.04	1.97	0.43	92.94	8.10	0.54
2	344740	Transcript	0	3.29	1.08	1.24	0.35	47.04	4.51	0.31
3	IG43	Intergenic	0	0.42	0.20	1.21	0.45	39.74	9.57	0.01
4	IG43_AR6	ActiveIntergenicRegion	0	0.16	0.00	1.29	0.26	33.76	20.60	0.00
5	IG43_SR5	SilentIntergenicRegion	0	0.00	0.00	0.28	1.58	13.47	6.26	0.00
6	IG43_AR5	ActiveIntergenicRegion	0	1.10	0.00	0.94	0.92	50.44	4.35	0.00
7	IG43_SR4	SilentIntergenicRegion	0	1.38	0.00	0.93	1.12	83.75	5.62	0.00
8	IG43_AR4	ActiveIntergenicRegion	0	0.46	0.71	1.56	0.19	73.39	26.59	0.00
9	IG43_AR3	ActiveIntergenicRegion	0	0.18	0.00	2.42	1.16	51.59	13.13	0.00
10	IG43_SR2	SilentIntergenicRegion	0	0.83	0.06	2.25	0.44	65.85	8.96	0.00
11	IG43_AR2	ActiveIntergenicRegion	0	0.45	0.80	4.43	1.62	171.85	30.63	0.00
12	IG43_SR1	SilentIntergenicRegion	0	0.65	0.26	1.26	0.07	52.43	9.34	0.00
13	IG43_AR1	ActiveIntergenicRegion	0	0.42	0.00	3.05	0.51	77.62	8.49	0.00
14	ER1a	ExonRegion	0	3.30	3.78	1.24	0.59	114.88	13.07	0.97
15	E1_Da	NovelBoundary	0	13.29	29.08	4.96	14.01	109.29	9.89	52.75
16	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	E2_Aa	NovelBoundary	0	4.84	0.00	0.86	3.14	48.09	7.88	0.57
18	ER2a	ExonRegion	0	2.36	1.44	2.42	0.76	129.38	5.44	0.00
19	E2_Da	NovelBoundary	0	0.78	0.00	0.00	0.00	40.13	9.27	0.00
20	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	E3_Aa	NovelBoundary	0	43.79	31.55	10.38	5.74	67.91	19.08	24.16
22	ER3a	ExonRegion	0	2.25	2.86	1.83	0.70	49.12	2.17	0.00
23	E3_Da	NovelBoundary	0	3.05	1.63	5.52	1.65	131.45	10.99	2.58
24	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
25	E4_Aa	NovelBoundary	0	40.86	30.79	14.63	4.85	91.20	16.91	9.70
26	ER4a	ExonRegion	0	2.28	0.00	5.57	0.00	74.50	6.38	1.05
27	E4_Da	NovelBoundary	0	29.27	23.30	2.27	1.46	64.57	11.28	2.46
28	E4a_E5a	KnownJunction	0	22.48	2.73	0.00	1.41	18.47	9.94	0.77
29	ER5a	ExonRegion	0	0.00	0.00	0.00	0.00	1.87	0.96	0.00
30	E6_Aa	NovelBoundary	0	50.34	109.29	3.68	2.57	63.70	8.50	0.00
31	ER6a	ExonRegion	0	0.23	0.00	1.31	0.00	82.18	7.13	0.30
32	IG42_AR8	ActiveIntergenicRegion	0	0.00	0.00	0.44	0.00	24.03	0.00	0.00
33	IG42_SR6	SilentIntergenicRegion	0	3.46	1.23	2.24	0.46	147.28	9.80	0.00
34	IG42_AR6	ActiveIntergenicRegion	0	0.26	0.00	1.20	1.20	229.41	36.96	0.00
35	IG42_AR5	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	62.82	13.89	0.00
36	IG42_SR3	SilentIntergenicRegion	0	0.00	0.11	0.06	0.11	9.26	5.67	0.00
37	IG42_AR4	ActiveIntergenicRegion	0	0.30	0.00	0.00	0.49	46.72	44.77	0.00
38	IG42_AR3	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	14.50	6.24	0.00