Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	SFXN4	Gene	0	37.42	15.33	40.55	15.34	44.72	6.98	35.85
2	355697	Transcript	0	5.62	2.28	5.59	2.81	7.69	0.00	3.08
3	392875	Transcript	0	6.32	3.05	5.89	6.19	8.81	0.72	8.85
4	330036	Transcript	1	9.71	3.18	10.96	7.50	31.91	1.10	28.98
5	369131	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	ER1a	ExonRegion	0	5.62	2.28	5.59	2.81	7.69	0.00	3.08
7	ER1b	ExonRegion	1	25.80	8.76	16.69	5.79	36.39	0.00	12.24
8	ER1c	ExonRegion	0	52.93	14.65	41.94	13.69	53.08	1.78	34.48
9	E1_Da	KnownBoundary	0	0.00	0.00	1.39	0.00	0.00	0.00	0.80
10	E1a_E1d	KnownJunction	0	9.83	14.69	9.20	10.62	8.67	1.58	24.25
11	ER1d	ExonRegion	0	2.56	2.64	3.36	2.34	3.44	1.32	2.93
12	E1_Ad	KnownBoundary	0	2.34	1.47	2.01	0.00	2.35	0.00	1.69
13	ER1e	ExonRegion	0	72.63	35.94	74.94	29.04	46.67	14.81	55.94
14	E1_Db	NovelBoundary	1	48.43	1.13	52.91	0.00	31.47	0.00	0.85
15	E1b_E2a	KnownJunction	1	141.46	44.35	126.27	37.68	100.53	20.98	69.54
16	ER2a	ExonRegion	0	96.35	37.53	89.73	27.58	147.70	12.16	71.26
17	E2_Da	NovelBoundary	1	4.99	1.39	4.30	0.00	11.90	0.00	21.70
18	E2a_E3a	KnownJunction	1	37.54	23.75	30.68	10.08	72.20	13.08	40.29
19	E2a_E4a	KnownJunction	1	9.71	3.18	10.96	7.50	31.91	1.10	28.98
20	I2	Intron	1	4.32	1.09	7.36	1.32	7.16	0.00	11.31
21	I2_AR1	ActiveIntronRegion	1	4.75	0.83	8.35	1.33	7.81	0.00	12.55
22	I2_SR1	SilentIntronRegion	1	3.50	1.97	5.24	1.44	6.01	0.00	8.88
23	E3a_E4a	KnownJunction	0	36.05	19.31	36.92	21.21	72.09	9.35	33.64
24	ER3a	ExonRegion	0	54.45	32.17	49.17	23.88	86.23	16.57	50.39
25	E4_Aa	NovelBoundary	0	12.68	2.76	11.71	1.68	17.31	1.05	19.96
26	ER4a	ExonRegion	0	73.59	40.00	80.79	50.56	100.69	14.09	78.18
27	E4a_E5a	KnownJunction	0	62.72	35.44	67.61	43.16	67.94	4.64	60.48
28	E5a_E7a	KnownJunction	0	51.67	23.51	63.49	15.90	52.21	9.35	43.80
29	ER5a	ExonRegion	0	90.17	42.75	96.42	38.99	64.69	11.18	72.36
30	ER6a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
31	ER7a	ExonRegion	0	120.59	48.89	119.17	39.39	112.60	15.51	107.73
32	E7a_E8a	KnownJunction	0	127.21	51.23	110.71	54.56	149.17	16.54	122.83
33	ER8a	ExonRegion	0	113.03	53.79	119.98	53.40	139.71	22.76	105.06
34	E8a_E9a	KnownJunction	0	80.18	43.61	105.23	37.85	152.03	26.29	83.32
35	ER9a	ExonRegion	0	67.10	37.07	85.97	33.06	95.55	21.32	63.09
36	E9a_E10a	KnownJunction	0	73.59	34.10	84.58	26.60	101.18	15.65	65.75
37	ER10a	ExonRegion	0	76.70	29.76	93.54	24.12	115.78	21.21	81.65
38	E10a_E11a	KnownJunction	0	63.30	33.13	87.08	25.95	90.85	14.61	89.03
39	ER11a	ExonRegion	0	51.80	26.78	76.45	28.52	109.67	15.82	93.42
40	E11a_E12a	KnownJunction	0	49.34	29.56	93.00	36.82	99.10	15.46	99.22
41	ER12a	ExonRegion	0	63.07	28.61	102.79	29.83	98.86	15.51	105.79
42	E12a_E13a	KnownJunction	0	79.19	26.48	91.44	28.31	96.04	6.46	84.37
43	ER13a	ExonRegion	0	91.38	31.28	107.07	26.14	125.24	11.62	97.03
44	E13a_E14a	KnownJunction	0	6.66	5.54	6.39	6.69	9.20	0.00	8.05
45	E13a_E15a	KnownJunction	0	99.15	15.95	121.23	17.18	114.85	12.62	78.95
46	ER14a	ExonRegion	0	9.91	2.40	7.08	6.42	12.92	1.55	12.11
47	E14a_E15a	KnownJunction	0	6.13	1.63	6.73	9.32	9.68	0.00	12.31
48	ER15a	ExonRegion	0	75.25	22.43	71.76	29.06	63.41	11.67	55.99
49	ER15b	ExonRegion	0	4.32	0.00	1.35	0.00	2.23	1.23	1.77
50	IG22_SR1	SilentIntergenicRegion	0	1.75	2.72	2.05	4.12	7.63	0.95	2.28