Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	FAM178A	Gene	0	26.94	6.34	29.41	4.04	50.56	6.37	28.15
2	238961	Transcript	0	20.41	5.19	20.13	3.32	43.52	5.17	19.30
3	370271	Transcript	0	6.15	4.05	3.75	2.14	11.68	2.92	3.49
4	370269	Transcript	0	0.26	0.98	1.25	1.92	2.50	0.01	2.15
5	ER1a	ExonRegion	0	0.26	0.46	0.00	0.27	1.24	0.23	0.25
6	E1_Ab	KnownBoundary	0	0.80	0.00	0.00	1.06	0.00	0.00	0.00
7	E1_Ac	KnownBoundary	0	1.82	0.00	0.52	1.65	0.00	2.04	0.00
8	ER1b	ExonRegion	0	2.31	0.15	0.34	2.81	4.00	1.61	1.52
9	ER1c	ExonRegion	0	12.79	5.77	7.52	6.52	15.90	9.55	16.91
10	E1a_E2a	KnownJunction	0	16.36	4.54	21.45	3.03	54.45	8.95	20.77
11	ER2a	ExonRegion	0	18.74	7.90	28.68	6.89	42.85	8.30	20.74
12	E2a_E3a	KnownJunction	0	17.79	8.51	26.17	5.99	40.50	9.89	22.39
13	ER3a	ExonRegion	0	40.03	9.41	49.56	6.57	53.69	12.43	38.59
14	E3a_E4a	KnownJunction	1	64.44	3.78	70.13	3.87	52.98	8.92	25.78
15	ER4a	ExonRegion	1	65.32	6.97	56.57	2.86	50.31	8.79	28.07
16	E4a_E5a	KnownJunction	0	41.62	7.99	38.74	0.00	33.89	6.16	22.94
17	ER5a	ExonRegion	0	42.62	8.24	46.10	3.67	52.40	8.59	33.08
18	E5a_E6a	KnownJunction	0	21.03	8.98	42.49	4.98	49.59	0.00	27.95
19	ER6a	ExonRegion	0	23.50	7.02	33.43	3.62	48.99	4.92	22.14
20	E6_Da	KnownBoundary	0	1.00	0.00	0.00	0.00	3.20	1.66	1.33
21	E6a_E7a	KnownJunction	0	25.87	2.94	29.93	1.52	54.11	3.97	22.24
22	ER6b	ExonRegion	0	6.15	4.05	3.75	2.14	11.68	2.92	3.49
23	ER7a	ExonRegion	0	28.81	3.14	39.65	1.54	52.57	2.14	37.59
24	E7a_E8a	KnownJunction	0	33.25	2.68	38.51	1.63	42.56	4.58	22.07
25	ER8a	ExonRegion	0	39.82	5.21	43.32	3.10	54.34	4.74	31.97
26	E8a_E9a	KnownJunction	0	55.21	8.98	48.20	2.84	49.38	3.89	31.74
27	ER9a	ExonRegion	0	38.25	6.35	41.94	4.88	50.43	3.44	34.76
28	E9a_E10a	KnownJunction	0	29.98	0.00	23.06	7.23	47.10	2.81	32.06
29	ER10a	ExonRegion	0	38.85	9.45	35.05	5.71	56.16	9.39	41.20
30	E10a_E11a	KnownJunction	0	43.34	8.64	49.12	1.30	61.39	6.14	53.18
31	ER11a	ExonRegion	0	39.26	10.27	40.60	4.06	66.37	8.29	41.07
32	E11a_E12a	KnownJunction	0	26.80	5.88	36.92	4.90	53.69	7.93	29.58
33	I11_AR1	ActiveIntronRegion	1	6.02	1.69	3.07	0.19	11.75	4.93	10.94
34	E12_Aa	NovelBoundary	1	0.73	1.63	2.77	0.00	5.16	3.32	7.64
35	ER12a	ExonRegion	0	31.68	4.27	40.73	4.47	61.91	8.33	35.88
36	E12a_E13a	KnownJunction	0	34.90	6.46	40.22	6.23	62.68	10.99	47.24
37	ER13a	ExonRegion	0	31.86	7.99	49.26	4.36	67.54	11.32	49.29
38	E13a_E14a	KnownJunction	0	33.00	4.31	60.66	2.74	87.14	6.19	49.76
39	ER14a	ExonRegion	0	21.80	4.12	41.70	6.45	65.87	4.82	47.03
40	E14a_E15a	KnownJunction	0	23.38	7.91	32.43	4.96	51.64	6.65	37.35
41	ER15a	ExonRegion	0	35.18	6.59	44.68	5.58	70.40	4.92	42.24
42	E15a_E16a	KnownJunction	0	33.68	4.20	37.77	3.63	107.59	1.34	49.96
43	ER16a	ExonRegion	0	31.51	9.55	39.52	4.55	85.38	4.81	45.39
44	E16a_E17a	KnownJunction	0	41.14	8.56	47.74	0.00	90.32	8.12	36.10
45	ER17a	ExonRegion	0	36.34	7.57	42.65	6.49	82.60	8.57	36.77
46	E17_Da	NovelBoundary	1	6.74	4.73	2.86	1.63	7.42	3.00	10.25
47	E17a_E18a	KnownJunction	0	26.92	8.46	29.82	5.85	74.81	3.89	38.42
48	I17_AR2	ActiveIntronRegion	1	6.96	0.52	3.98	0.00	5.74	0.52	7.72
49	E18_Aa	NovelBoundary	1	10.97	3.23	4.80	0.00	10.12	0.00	16.72
50	ER18a	ExonRegion	0	44.09	8.20	40.40	9.40	66.37	6.67	43.90
51	E18a_E19a	KnownJunction	0	51.77	12.79	36.62	8.78	64.27	7.02	41.79
52	E19_Aa	NovelBoundary	1	17.36	0.00	11.57	0.00	0.00	0.00	2.51
53	ER19a	ExonRegion	0	41.55	13.06	35.68	8.06	78.88	7.92	36.97
54	E19_Da	KnownBoundary	0	0.83	0.00	2.31	1.08	0.95	0.00	1.59
55	E19a_E20a	KnownJunction	0	35.82	8.98	34.50	5.74	67.11	9.59	27.77
56	ER19b	ExonRegion	0	0.26	0.98	1.25	1.92	2.50	0.01	2.15
57	ER20a	ExonRegion	0	25.16	6.12	25.89	3.96	62.20	5.68	29.86