Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	C10orf68	Gene	0	3.86	0.25	1.10	0.08	3.34	0.39	1.39
2	302316	Transcript	0	1.65	0.00	0.36	0.00	0.08	0.99	1.31
3	375028	Transcript	0	2.42	0.00	0.35	0.00	0.13	0.00	0.00
4	375030	Transcript	0	0.93	0.13	0.34	0.16	7.95	0.00	0.08
5	375025	Transcript	0	0	0	0	0	0	0	0
6	375037	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	ER1a	ExonRegion	0	3.42	0.00	0.38	0.00	0.00	0.00	0.00
8	E1_Ab	KnownBoundary	0	5.37	0.00	1.81	0.00	0.00	1.47	1.35
9	ER1b	ExonRegion	0	1.37	0.00	0.30	0.63	0.03	0.00	0.42
10	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	E1a_E4a	KnownJunction	0	0.00	0.00	0.62	0.00	0.00	0.00	0.00
12	E1a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	ER2a	ExonRegion	0	0.00	0.00	0.00	1.25	0.00	0.00	0.67
14	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	ER3a	ExonRegion	0	0.00	0.00	0.00	0.17	0.00	0.00	0.05
16	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	ER4a	ExonRegion	0	4.11	0.00	1.54	0.67	0.15	0.31	1.27
18	E4a_E5a	KnownJunction	0	7.31	0.00	0.00	0.00	0.00	3.11	3.08
19	ER5a	ExonRegion	0	4.80	0.00	0.60	0.00	0.00	5.06	0.87
20	E5a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	E5a_E8b	KnownJunction	0	2.47	0.00	0.65	0.00	0.00	0.00	0.69
22	ER6a	ExonRegion	0	3.88	0.00	0.55	0.00	0.38	0.00	0.00
23	E6a_E8b	KnownJunction	0	3.39	0.00	0.50	0.00	0.00	0.00	0.00
24	ER7a	ExonRegion	0	8.40	1.21	3.06	0.00	71.51	0.00	0.00
25	E7_Da	NovelBoundary	0	796.89	342.40	547.54	328.51	293.55	293.54	250.90
26	E7a_E8b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
27	ER8a	ExonRegion	0	3.46	0.00	0.68	0.00	0.00	0.00	0.00
28	ER8b	ExonRegion	0	4.92	0.00	2.68	0.00	0.00	0.00	0.71
29	E8a_E9a	KnownJunction	0	2.50	0.00	0.00	0.00	0.00	0.00	0.89
30	ER9a	ExonRegion	0	1.28	0.00	0.00	0.00	0.00	0.00	0.21
31	E9a_E10a	KnownJunction	0	1.67	0.00	0.00	0.00	0.00	0.00	0.00
32	E9a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
33	ER10a	ExonRegion	0	1.91	0.00	0.00	0.00	0.36	0.00	1.39
34	E10a_E11a	KnownJunction	0	1.97	0.00	0.00	0.00	0.00	0.00	1.78
35	ER11a	ExonRegion	0	5.62	0.00	1.11	0.00	0.01	0.00	3.32
36	E11a_E12a	KnownJunction	0	4.71	0.00	0.88	0.00	0.00	0.00	0.85
37	ER12a	ExonRegion	0	3.06	0.00	1.05	0.00	0.00	0.94	1.34
38	E12a_E13a	KnownJunction	0	6.89	0.00	0.89	0.00	0.00	0.00	1.69
39	ER13a	ExonRegion	0	3.66	0.65	2.11	0.00	0.00	0.81	1.78
40	E13a_E14a	KnownJunction	0	1.84	1.26	2.90	0.00	0.00	0.00	4.53
41	ER14a	ExonRegion	0	3.02	0.90	1.77	0.00	0.00	0.03	2.54
42	E14a_E15a	KnownJunction	0	2.32	0.00	0.78	0.00	0.00	0.00	1.50
43	E14a_E16a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
44	ER15a	ExonRegion	0	2.17	0.00	1.22	0.00	0.00	0.00	0.45
45	E15a_E16a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
46	E15a_E19a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
47	ER16a	ExonRegion	0	0.97	0.00	0.00	0.00	0.00	0.00	1.12
48	E16a_E17a	KnownJunction	0	0.85	0.00	0.00	0.00	0.00	0.00	1.61
49	ER17a	ExonRegion	0	2.93	0.00	0.59	0.00	0.00	0.00	1.41
50	E17a_E18a	KnownJunction	0	3.57	0.00	1.55	0.00	0.00	0.00	0.70
51	ER18a	ExonRegion	0	4.46	0.00	1.02	0.00	0.00	0.00	1.44
52	E18a_E19a	KnownJunction	0	3.40	0.00	0.00	0.00	0.00	0.00	2.82
53	ER19a	ExonRegion	0	3.87	0.00	1.60	0.00	0.00	0.00	1.79
54	E19a_E20a	KnownJunction	0	0.00	0.00	0.69	0.00	0.00	0.00	0.00
55	E19a_E21a	KnownJunction	0	0.75	0.00	0.70	0.00	0.00	0.00	0.86
56	ER20a	ExonRegion	0	1.56	0.00	0.48	0.00	0.00	0.00	0.60
57	E20a_E21a	KnownJunction	0	1.64	0.00	0.00	0.00	0.00	0.00	0.00
58	ER21a	ExonRegion	0	3.09	2.10	0.60	0.00	0.00	0.00	0.95
59	E21a_E22a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
60	E21a_E22b	KnownJunction	0	5.49	0.00	0.72	0.00	0.00	0.00	2.19
61	ER22a	ExonRegion	0	1.54	0.30	0.17	0.00	0.00	0.00	0.51
62	ER22b	ExonRegion	0	6.28	0.09	0.82	0.00	0.00	0.00	2.74
63	E22a_E23a	KnownJunction	0	1.57	1.31	1.52	0.00	0.00	0.00	2.35
64	ER23a	ExonRegion	0	3.69	0.00	1.81	0.00	0.35	0.00	2.10
65	E23a_E24a	KnownJunction	0	5.57	0.00	2.24	0.00	1.06	0.00	1.71
66	E23a_E24b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
67	ER24a	ExonRegion	0	5.74	0.00	1.66	0.00	0.22	0.00	2.54
68	E24a_E25a	KnownJunction	0	4.76	0.00	0.79	0.00	0.00	0.00	1.96
69	ER24b	ExonRegion	0	4.82	0.00	1.35	0.00	0.00	0.00	2.61
70	ER25a	ExonRegion	0	9.18	0.00	2.27	0.00	0.27	0.00	2.70
71	E25a_E26a	KnownJunction	0	6.09	0.00	0.00	0.00	2.07	0.00	2.45
72	ER26a	ExonRegion	0	8.73	0.74	0.25	0.00	0.39	0.41	2.00
73	E26a_E27a	KnownJunction	0	8.46	0.00	0.86	0.00	0.00	1.66	1.28
74	ER27a	ExonRegion	0	8.42	1.01	0.22	0.00	0.25	1.10	1.27
75	E27a_E29a	KnownJunction	0	1.85	0.00	0.00	0.00	1.18	1.61	2.55
76	ER28a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
77	ER29a	ExonRegion	0	2.02	0.45	1.65	0.00	0.09	1.76	2.81
78	E29b_E30a	KnownJunction	0	1.52	0.00	0.00	0.00	0.00	3.11	3.00
79	ER29b	ExonRegion	0	1.71	0.00	0.00	0.00	0.00	2.45	2.90
80	ER30a	ExonRegion	0	0.81	0.00	0.50	0.00	0.47	0.39	1.28
81	IG7	Intergenic	0	21.56	9.55	91.89	57.85	2.35	14.48	18.03
82	IG7_AR1	ActiveIntergenicRegion	0	24.27	29.53	129.63	200.32	3.37	57.71	38.96
83	IG7_SR2	SilentIntergenicRegion	0	18.64	8.34	121.42	69.46	3.88	17.82	17.85
84	IG7_AR2	ActiveIntergenicRegion	0	44.74	12.16	232.34	88.56	5.29	20.10	33.42
85	IG7_AR3	ActiveIntergenicRegion	0	58.61	13.47	261.78	83.55	3.39	22.85	28.33
86	IG7_SR3	SilentIntergenicRegion	0	30.41	8.75	144.82	48.53	2.60	11.08	20.59
87	IG7_AR6	ActiveIntergenicRegion	0	18.36	15.26	68.80	73.44	1.45	13.66	18.85
88	IG7_AR7	ActiveIntergenicRegion	0	36.44	6.41	133.68	32.39	1.71	7.11	18.19
89	IG7_SR6	SilentIntergenicRegion	0	29.99	8.96	126.73	51.00	1.31	10.26	21.97
90	IG7_AR8	ActiveIntergenicRegion	0	19.36	9.83	95.88	54.01	1.14	9.81	20.94
91	IG7_AR9	ActiveIntergenicRegion	0	26.62	8.78	83.39	37.79	3.99	7.47	13.11
92	IG7_AR10	ActiveIntergenicRegion	0	57.99	10.22	102.09	49.37	3.62	12.76	13.29
93	IG7_SR7	SilentIntergenicRegion	0	74.42	10.10	158.38	66.26	7.93	10.50	20.62
94	IG7_AR11	ActiveIntergenicRegion	0	71.34	8.50	192.26	82.30	4.32	12.67	26.76
95	IG7_AR12	ActiveIntergenicRegion	0	71.21	8.50	180.26	82.02	4.95	11.72	24.88
96	IG7_AR13	ActiveIntergenicRegion	0	68.50	8.68	171.57	84.62	4.74	8.93	25.73
97	IG7_AR14	ActiveIntergenicRegion	0	30.14	7.84	109.51	33.95	2.81	8.18	14.62
98	IG7_SR8	SilentIntergenicRegion	0	48.38	8.69	172.63	49.29	6.14	10.69	25.65
99	IG7_AR15	ActiveIntergenicRegion	0	22.67	1.21	124.86	35.33	4.86	8.58	16.42
100	IG7_SR9	SilentIntergenicRegion	0	25.88	6.25	111.17	49.15	4.32	5.92	23.70
101	IG7_AR16	ActiveIntergenicRegion	0	16.27	7.29	74.85	56.94	2.43	4.50	24.17
102	IG7_SR10	SilentIntergenicRegion	0	19.65	8.73	82.42	52.41	4.58	7.32	24.19
103	IG7_AR17	ActiveIntergenicRegion	0	22.83	15.10	82.83	47.38	4.86	7.53	26.31
104	IG7_SR11	SilentIntergenicRegion	0	23.21	14.70	84.20	47.88	4.13	7.23	24.89
105	IG7_SR12	SilentIntergenicRegion	0	17.25	10.93	93.54	41.98	3.14	8.66	22.55
106	IG7_AR18	ActiveIntergenicRegion	0	13.03	4.88	69.58	26.07	8.84	5.59	21.02