Summary page for comparison: 'vHMECs_vs_Lum_Epi' (HS2263_vs_HS1187) - Project: Breast


Download complete candidate list as tab delimited text file: vHMECs_vs_Lum_Epi.txt


Summary of Differential (DE) and Alternative Expression (AE) for all gene loci:

Total Candidate Genes: 9,975 (of 36,953 possible genes)

DE Genes: 5,581

AE Genes: 6,542

Alternative Exon Usage (EU) Genes: 3,716

Alernative Exon Skipping (ES) Genes: 1,224

Alternative Exon Boundary (AB) Genes: 4,303

Intron Retention (IR) Genes: 746

Cryptic Exon (CE) Genes: 883


Candidate Differential AND Alternative Expression Genes

The following table lists candidate genes ranked according to 'Score'. Only the top 250 genes appear in each list. For a complete list download the results file provided above. To appear in this list, a 'candidate gene' must be differentially expressed at the gene level (DE) or contain at least one alternatively expressed (AE) feature. The 'Score' is based on the fold change as well as other factors for AE events (multiple features supporting the same event, reciprocity, etc.). The 'Event Type' indicates whether the gene was differentially expressed ('DE') or alternatively expressed 'AE'. 'Direction' refers to the direction (+ve/-ve) of the fold change. 'Gain' (+ve) indicates higher expression in library A than library B and vice versa. 'FC' stands for fold change. '# AE Events' is the number of significant alternative expression events observed for each gene. 'AE Codes' refers to various alternative expression subtypes (listed above). The 'Top Feature' is the most significant AE event observed for an AE gene. 'Adjacency' refers to the number of consecutive AE features (potentially supporting the same isoform). 'Adjacency %' refers to the percent of all AE events for a gene that were adjacent to each other.


RankOverall
Rank
ScoreNameGene
Type
Trans.
Count
Exon
Count
Event
Type
DirectionFC# AE
Events
AE CodesTop FeatureAdjacency
%
1117.31EEF1G'protein_coding'211AELoss-2189.041AB E7_Aa0
2214.32LTF'protein_coding'117DELoss-20507.970N/ALTFN/A
3313.92SERPINB7'protein_coding'210AEGain193.584EU ES E2a_E3a100.00
4413.17RNF103'protein_coding'721AELoss-141.4022EU AB IR E3_Ab80.00
5512.94RSL1D1'protein_coding'212AELoss-272.762EU AB E7_Ab0
6612.56KPNB1'protein_coding'122AELoss-215.031AB E13_Aa0
7712.43C4orf7'protein_coding'15DELoss-5527.250N/AC4orf7N/A
8812.39VIM'protein_coding'19AELoss-66.972EU AB E9_Aa0
9912.33CCL2'protein_coding'13DELoss-5164.270N/ACCL2N/A
101012.16SMARCD2'protein_coding'217AELoss-234.982EU AB E10_Aa0
111112.13SEC61G'protein_coding'26AELoss-206.531AB E1_Da0
121212.11SLC34A2'protein_coding'113DELoss-4416.610N/ASLC34A2N/A
131312.04EIF3I'protein_coding'111AELoss-199.831AB E10_Aa0
141412.03SLC7A5'protein_coding'110AELoss-40.422AB E2_Da0
151512.00ARHGAP1'protein_coding'113AELoss-86.091AB E3_Aa0
161611.94KLK10'protein_coding'39AELoss-111.521AB E8_Aa0
171711.94EGFR'protein_coding'431AELoss-112.601AB E11_Aa0
181811.83RPL19'protein_coding'16AELoss-159.441AB E3_Da0
191911.81AC034193.5'protein_coding'12AELoss-188.421EU E1a_E2a0
202011.73IGF2R'protein_coding'250AELoss-42.188EU AB E27_Aa33.33
212111.73CXCL5'protein_coding'25DELoss-3397.200N/ACXCL5N/A
222211.69RP5-1022P6.2'protein_coding'220AELoss-258.215EU ES AB CE E20_Aa100.00
232311.68PABPC1'protein_coding'216AELoss-190.882EU AB E12_Da0
242411.65CLASP1'protein_coding'450AELoss-76.176EU AB CE E33_Da100.00
252511.63FN1'protein_coding'1050DEGain3172.970N/AFN1N/A
262611.58KIAA0652'protein_coding'420AELoss-196.229AB IR E14_Da0
272711.55EIF3E'protein_coding'113AELoss-182.922EU AB E9_Aa0
282811.54HSPA5'protein_coding'18AELoss-86.201AB E7_Aa0
292911.48COL17A1'protein_coding'358DEGain2861.240N/ACOL17A1N/A
303011.48PTEN'protein_coding'19AELoss-196.652ES AB E3_Aa0
313111.45HSPA8'protein_coding'211AELoss-166.651ES E5a_E9b0
323211.36NET1'protein_coding'316AELoss-126.741ES ENST000003803370
333311.29CALM2'protein_coding'28AELoss-601.971AB E4_Da0
343411.28CTSA'protein_coding'620AELoss-109.221AB E8_Aa0
353511.18MFGE8'protein_coding'28AELoss-103.428EU AB CE E4_Aa0
363611.16CHI3L1'protein_coding'212DELoss-2283.760N/ACHI3L1N/A
373711.15TNIP1'protein_coding'221AELoss-1016.421AB E13_Da0
383811.14SREBF2'protein_coding'119AELoss-141.1311AB IR CE E13_Aa0
393911.08UBC'protein_coding'620AELoss-153.751EU E2e_E2f0
404011.05SEC61A1'protein_coding'112AELoss-111.081AB E4_Aa0
414111.02PROM1'protein_coding'127DELoss-2078.220N/APROM1N/A
424211.00PPP1R14B'protein_coding'14AELoss-75.141AB E2_Aa0
434311.00GSN'protein_coding'936AELoss-68.128EU ES AB E26_Aa100.00
444411.00COPG'protein_coding'124AELoss-71.421AB E20_Aa0
454510.99APLP2'protein_coding'418AELoss-118.342AB E8_Da0
464610.99STAG2'protein_coding'1047AELoss-421.736EU AB E32_Aa75.00
474710.96SPRR1B'protein_coding'24DEGain1994.060N/ASPRR1BN/A
484810.94NCSTN'protein_coding'624AELoss-59.431AB E13_Aa0
494910.94VPS35'protein_coding'117AELoss-135.743EU AB E8_Aa0
505010.88GARS'protein_coding'117AELoss-78.531AB E9_Aa0
515110.85TBCB'protein_coding'28AELoss-105.392AB E6_Aa0
525210.81OPTN'protein_coding'722AELoss-84.743EU AB E16_Aa0
535310.81KRT19'protein_coding'16DELoss-1789.230N/AKRT19N/A
545410.80ENTPD6'protein_coding'721AELoss-131.174EU ES AB E5_Da50.00
555510.80ANXA11'protein_coding'522AELoss-169.4011EU AB CE E13_Aa100.00
565610.79ITPR3'protein_coding'158AELoss-77.1210EU ES AB E16_Aa0.00
575710.79C19orf2'protein_coding'314AELoss-98.293EU AB E9_Aa0
585810.79RAB3GAP1'protein_coding'227AELoss-95.682AB E10_Aa0
595910.78SRI'protein_coding'29AELoss-97.681AB E8_Aa0
606010.77CLSTN1'protein_coding'319AELoss-44.084EU AB E16_Da100.00
616110.76AP2A2'protein_coding'224AELoss-66.144ES AB E13_Aa0
626210.75LAMA3'protein_coding'377AELoss-2.0035EU ES AB E10a_E11a75.76
636310.74PRPF8'protein_coding'246AELoss-55.396EU AB E31_Aa100.00
646410.74KIAA0664'protein_coding'126AELoss-59.137EU AB E24_Aa100.00
656510.72CALM1'protein_coding'16AELoss-131.082EU AB E3_Da0
666610.72ABCE1'protein_coding'118AELoss-120.332EU AB E5_Aa0
676710.64KIT'protein_coding'121DELoss-1591.250N/AKITN/A
686810.62THOC7'protein_coding'210AELoss-104.031AB E5_Aa0
696910.59OLFM4'protein_coding'15DELoss-1546.680N/AOLFM4N/A
707010.57TPMT'protein_coding'19AELoss-49.756EU AB E8_Da100.00
717110.50GRN'protein_coding'318AELoss-62.953AB E9_Aa0
727210.50GANAB'protein_coding'226AELoss-68.882AB E23_Aa0
737310.49KHSRP'protein_coding'223AELoss-121.196EU ES AB CE E10_Aa0.00
747410.47MYO6'protein_coding'540AELoss-437.0612EU ES AB IR CE E29a_E30a100.00
757510.46GAPDH'protein_coding'621AELoss-60.551AB E9_Da0
767610.39NSMAF'protein_coding'131AELoss-55.625EU AB E6_Aa50.00
777710.33TNFAIP2'protein_coding'111DELoss-1287.870N/ATNFAIP2N/A
787810.32IQGAP1'protein_coding'138AELoss-117.181AB E30_Aa0
797910.31YARS'protein_coding'113AELoss-75.436AB IR CE E2_Da0
808010.30TOM1L1'protein_coding'116AELoss-83.411AB E7_Aa0
818110.27GABARAP'protein_coding'14AELoss-314.501AB E4_Aa0
828210.26POLR2A'protein_coding'129AELoss-57.321AB E15_Aa0
838310.25SMARCA4'protein_coding'236AELoss-95.864EU AB E19_Da0.00
848410.25SERINC2'protein_coding'212AELoss-34.101AB E9_Aa0
858510.24BCAS3'protein_coding'736AELoss-49.6415EU AB CE E23_Aa63.64
868610.21MGP'protein_coding'14DELoss-1183.970N/AMGPN/A
878710.20PNLIPRP3'protein_coding'112DEGain1180.340N/APNLIPRP3N/A
888810.20RPL27'protein_coding'26AELoss-74.713EU AB E2_Ab100.00
898910.18DYM'protein_coding'117AELoss-51.382ES AB E15_Da0
909010.17CD44'protein_coding'621AELoss-34.3121EU ES AB CE E18_Aa92.86
919110.11AZGP1'protein_coding'14DELoss-1108.920N/AAZGP1N/A
929210.11MAP3K7'protein_coding'521AELoss-77.095EU ES AB CE E10_Aa0.00
939310.11CSNK2A1'protein_coding'619AELoss-67.355AB CE E12_Aa0
949410.10C10orf81'protein_coding'622DELoss-1095.770N/AC10orf81N/A
959510.09RPS4X'protein_coding'29AELoss-277.011AB E6_Da0
969610.07HLA-DRA'protein_coding'28DELoss-1077.200N/AHLA-DRAN/A
979710.07XPO6'protein_coding'124AELoss-48.111AB E4_Aa0
989810.04HSPBP1'protein_coding'212AELoss-96.313EU AB E8_Aa0
99999.99DDX3X'protein_coding'117AELoss-1016.213EU AB E13_Aa0
1001009.99PABPC4'protein_coding'419AELoss-27.4516EU AB IR E4_Da75.00
1011019.99SEC16A'protein_coding'842AELoss-98.8821EU ES AB IR E15_Aa33.33
1021029.98AP3D1'protein_coding'539AELoss-35.905EU AB E28_Aa100.00
1031039.94CDH1'protein_coding'317AELoss-44.775EU ES AB E5_Aa0.00
1041049.93CXCL6'protein_coding'14DELoss-974.000N/ACXCL6N/A
1051059.93ANXA2'protein_coding'317AELoss-70.431AB E3_Aa0
1061069.91DRG1'protein_coding'19AELoss-64.181AB E2_Da0
1071079.90EPAS1'protein_coding'116AELoss-62.375EU AB E4_Aa0.00
1081089.87PPA2'protein_coding'715AELoss-52.342AB CE E10_Aa0
1091099.86VDAC1'protein_coding'314AELoss-38.423AB E9_Da0
1101109.85TLN1'protein_coding'364AELoss-64.867EU AB E53_Da0.00
1111119.84PDE4B'protein_coding'524DELoss-915.880N/APDE4BN/A
1121129.83MRPL10'protein_coding'26AELoss-56.822AB E5_Aa0
1131139.80ITGB1'protein_coding'625AELoss-76.191AB E16_Aa0
1141149.80C3'protein_coding'141AELoss-1197.947EU AB E34_Aa25.00
1151159.79PPP2R1A'protein_coding'218AELoss-71.981AB E3_Aa0
1161169.79SLC44A2'protein_coding'223AELoss-65.861AB E6_Aa0
1171179.78KDELR1'protein_coding'15AELoss-39.631AB E4_Aa0
1181189.78SAMD4B'protein_coding'220AELoss-75.798EU ES AB CE E8_Aa0.00
1191199.77ITGA6'protein_coding'631AELoss-25.0713EU ES AB CE E12_Aa71.43
1201209.71RNF185'protein_coding'27AELoss-40.851AB E7_Aa0
1211219.70RPS3'protein_coding'29AELoss-43.581AB E3_Aa0
1221229.70GPR108'protein_coding'118AELoss-71.014AB E17_Aa0
1231239.69FAM62B'protein_coding'327AELoss-283.1512EU ES AB CE E5_Aa50.00
1241249.69TNC'protein_coding'528AELoss-37.4621EU ES AB IR CE E15_Aa33.33
1251259.68FBLN5'protein_coding'314DELoss-214.7617EU ES AB FBLN580.00
1261269.68DDX1'protein_coding'228AELoss-84.571AB E10_Aa0
1271279.68EIF5A'protein_coding'39AELoss-42.771AB E6_Aa0
1281289.66UBR4'protein_coding'7115AELoss-237.6514EU ES AB E72_Aa16.67
1291299.63LGTN'protein_coding'316AELoss-37.291AB E3_Aa0
1301309.62CCNG1'protein_coding'312AELoss-66.521AB E4_Aa0
1311319.61AP1B1'protein_coding'527AELoss-55.771AB E18_Da0
1321329.61TNF'protein_coding'14DELoss-780.640N/ATNFN/A
1331339.60TOMM20'protein_coding'15AELoss-64.702EU AB E5_Aa0
1341349.59WIPI1'protein_coding'113AELoss-69.713ES AB E12_Aa0.00
1351359.58COL12A1'protein_coding'471AELoss-17.0616EU AB E16_Aa61.54
1361369.58EIF1AX'protein_coding'29AELoss-78.731ES E3a_E5a0
1371379.57DDOST'protein_coding'111AELoss-43.251AB E3_Da0
1381389.56SNRPG'protein_coding'14AELoss-64.761AB E3_Da0
1391399.55APEX1'protein_coding'27AELoss-213.851AB E5_Aa0
1401409.55CD55'protein_coding'925AELoss-358.473ES AB E4_Ab0
1411419.54FST'protein_coding'28DEGain743.810N/AFSTN/A
1421429.54EI24'protein_coding'317AELoss-38.403EU AB E8_Aa0
1431439.53TNIP3'protein_coding'213DELoss-741.490N/ATNIP3N/A
1441449.53DNAJC10'protein_coding'226AELoss-57.494EU ES AB E8_Da50.00
1451459.53KRT14'protein_coding'18DEGain738.900N/AKRT14N/A
1461469.51FAM49B'protein_coding'326AELoss-70.366EU ES AB E11_Aa33.33
1471479.50HSPA9B'protein_coding'117AELoss-62.581AB E10_Aa0
1481489.49PGM1'protein_coding'313AELoss-34.901AB E5_Aa0
1491499.47NUCKS1'protein_coding'310AELoss-54.601AB E6_Aa0
1501509.45MYH9'protein_coding'551AELoss-64.534AB E34_Aa0
1511519.44UBAP2L'protein_coding'637AELoss-31.446EU AB E12_Da33.33
1521529.44LMAN2'protein_coding'18AELoss-39.581AB E5_Da0
1531539.43PLEC1'protein_coding'839AELoss-23.623EU AB E2_Aa0
1541549.43ATPAF1'protein_coding'29AELoss-41.641AB E5_Aa0
1551559.42CALML3'protein_coding'11DEGain684.770N/ACALML3N/A
1561569.42WDR3'protein_coding'229AELoss-53.173EU AB E15_Aa0.00
1571579.42TMEM184B'protein_coding'312AELoss-54.152AB E8_Aa0
1581589.42SND1'protein_coding'124AELoss-70.714EU AB E9_Da100.00
1591599.41ATP6V1E1'protein_coding'39AELoss-51.691AB E6_Aa0
1601609.40IGFBP6'protein_coding'14DEGain676.620N/AIGFBP6N/A
1611619.40CNOT7'protein_coding'17AELoss-58.381AB E5_Aa0
1621629.40PSMF1'protein_coding'515AELoss-42.961AB E3_Aa0
1631639.39CCND2'protein_coding'15DEGain669.810N/ACCND2N/A
1641649.38C8orf4'protein_coding'11DELoss-668.320N/AC8orf4N/A
1651659.37PSMD2'protein_coding'232AELoss-51.652AB E15_Aa0
1661669.37PDIA3'protein_coding'113AELoss-69.961AB E8_Aa0
1671679.36FRMD4B'protein_coding'225AEGain88.5322EU ES ER5a85.71
1681689.36C19orf10'protein_coding'16AELoss-42.291AB E6_Aa0
1691699.35DNAJC7'protein_coding'114AELoss-68.072EU AB E3_Aa0
1701709.35LAMB2'protein_coding'235AELoss-51.983AB E16_Aa0
1711719.35ATXN1'protein_coding'314AELoss-31.1023EU AB IR CE E2_Da100.00
1721729.33BRI3'protein_coding'13AELoss-32.472AB E2_Aa0
1731739.33TBC1D9'protein_coding'122AELoss-198.626EU AB E21_Aa100.00
1741749.32ITGB4'protein_coding'241AELoss-13.412ES AB E38_Aa0
1751759.32WFDC2'protein_coding'46DELoss-640.480N/AWFDC2N/A
1761769.29AF347015.1'Mt_tRNA'11DELoss-624.260N/AAF347015.1N/A
1771779.28FRMD6'protein_coding'317AEGain102.138EU ES AB ER1a100.00
1781789.28AF347015.1'Mt_tRNA'11DELoss-620.080N/AAF347015.1N/A
1791799.27STT3B'protein_coding'116AELoss-218.874EU AB E3_Da0
1801809.27LARP1'protein_coding'322AELoss-36.791AB E18_Aa0
1811819.27KRT6A'protein_coding'19DEGain617.710N/AKRT6AN/A
1821829.27SARS'protein_coding'214AELoss-49.464EU AB E12_Aa0.00
1831839.27TIMP2'protein_coding'15AELoss-14.071AB E4_Aa0
1841849.27TMEM30A'protein_coding'29AELoss-369.931AB E5_Da0
1851859.26VPS26A'protein_coding'312AELoss-50.022AB E3_Da0
1861869.26HBS1L'protein_coding'629AELoss-67.988EU ES AB E11_Aa20.00
1871879.26SRRM2'protein_coding'421AELoss-211.773EU AB E7_Aa0.00
1881889.25CREBL1'protein_coding'322AELoss-44.972AB E4_Aa0
1891899.24EIF4G1'protein_coding'938AELoss-55.551AB E17_Aa0
1901909.23AC093283.3'protein_coding'214AELoss-48.745EU AB E5_Aa50.00
1911919.23ACTR10'protein_coding'113AELoss-46.373AB E12_Aa0
1921929.23C3orf10'protein_coding'14AELoss-31.201AB E2_Da0
1931939.23MTCH1'protein_coding'521AELoss-61.111AB E8_Aa0
1941949.21LIMA1'protein_coding'212AELoss-21.539EU AB E6_Aa83.33
1951959.21USO1'protein_coding'124AELoss-186.561AB E10_Aa0
1961969.20PPP1CC'protein_coding'210AELoss-208.971AB E3_Da0
1971979.18HERPUD1'protein_coding'310AELoss-562.501AB E3_Ab0
1981989.17MAN1B1'protein_coding'319AELoss-40.872AB E5_Aa0
1991999.17NDUFA10'protein_coding'420AELoss-43.562AB E4_Aa0
2002009.15AC091742.5'protein_coding'113DELoss-569.960N/AAC091742.5N/A
2012019.15MYO1B'protein_coding'536AELoss-89.218EU ES AB E6_Aa83.33
2022029.13STXBP2'protein_coding'226AELoss-57.452AB E12_Aa0
2032039.12FXYD5'protein_coding'414AELoss-33.011AB E3_Aa0
2042049.12C6orf72'protein_coding'29AELoss-62.102AB E4_Aa0
2052059.11HYOU1'protein_coding'228AELoss-60.705EU ES AB E21_Aa0.00
2062069.11SLC25A39'protein_coding'213AELoss-32.332ES AB E12_Aa0
2072079.10AMZ2'protein_coding'613AELoss-26.842AB E3_Aa0
2082089.09CAST'protein_coding'1042AELoss-51.612ES AB E30_Ab0
2092099.09DLST'protein_coding'318AELoss-33.236EU ES AB E14_Da66.67
2102109.09RRAGC'protein_coding'17AELoss-65.821AB E3_Aa0
2112119.09SAPS1'protein_coding'124AELoss-37.114AB E22_Aa0
2122129.07RPS19'protein_coding'16AELoss-64.101AB E6_Aa0
2132139.06C11orf73'protein_coding'15AELoss-43.371AB E4_Aa0
2142149.06SERPINB4'protein_coding'28DELoss-534.630N/ASERPINB4N/A
2152159.04CTNNA1'protein_coding'222AELoss-205.541AB E13_Aa0
2162169.04TAX1BP1'protein_coding'322AELoss-110.574EU AB E12_Aa100.00
2172179.03DNM2'protein_coding'526AELoss-34.335EU ES AB E14_Aa33.33
2182189.03EIF3EIP'protein_coding'316AELoss-45.291AB E7_Da0
2192199.02MMP28'protein_coding'210DEGain520.000N/AMMP28N/A
2202209.02FIP1L1'protein_coding'318AELoss-59.109EU ES AB IR E7_Aa50.00
2212219.01ATXN10'protein_coding'425AELoss-59.003AB E11_Da0
2222229.00SUPT4H1'protein_coding'15AELoss-61.641AB E3_Da0
2232238.99PIGR'protein_coding'111DELoss-507.490N/APIGRN/A
2242248.97MDH2'protein_coding'19AELoss-29.561AB E4_Aa0
2252258.97COPE'protein_coding'310AELoss-51.181AB E3_Aa0
2262268.96AC091742.5'protein_coding'120DELoss-499.700N/AAC091742.5N/A
2272278.94TMBIM1'protein_coding'112AELoss-30.851AB E9_Aa0
2282288.91CD82'protein_coding'210AELoss-30.581AB E7_Da0
2292298.89NOTCH2'protein_coding'236AELoss-58.103EU AB E33_Aa0
2302308.89TFIP11'protein_coding'523AELoss-34.886ES AB E7_Da0
2312318.89SEPT9'protein_coding'315AELoss-27.242EU ES E1a_E3a100.00
2322328.89PARVA'protein_coding'113AELoss-56.801AB E11_Aa0
2332338.87EPRS'protein_coding'132AELoss-46.792EU AB E17_Aa0
2342348.87CYP24A1'protein_coding'314DELoss-467.170N/ACYP24A1N/A
2352358.87SF3B2'protein_coding'226AELoss-53.275EU AB E19_Aa50.00
2362368.87MYO1E'protein_coding'128AELoss-41.857AB CE E12_Aa0
2372378.84DNAJC1'protein_coding'315AELoss-26.371AB E10_Da0
2382388.84AC006511.5'protein_coding'18AELoss-40.882AB E3_Aa0
2392398.83PSMA4'protein_coding'19AELoss-184.181AB E5_Da0
2402408.83RELL1'protein_coding'17AELoss-43.2312EU AB CE I6_AR100
2412418.82VCP'protein_coding'117AELoss-161.503AB E4_Aa0
2422428.82CSNK2A2'protein_coding'112AELoss-28.041AB E8_Aa0
2432438.82NCKAP1'protein_coding'232AELoss-45.891AB E24_Aa0
2442448.81PSMC3'protein_coding'112AELoss-48.501AB E5_Aa0
2452458.81SSU72'protein_coding'410AELoss-41.464EU AB E2_Aa0
2462468.81C20orf4'protein_coding'38AELoss-45.411AB E3_Da0
2472478.80RFC1'protein_coding'226AELoss-64.627EU AB E17_Aa75.00
2482488.80DST'protein_coding'9123AEGain291.60104EU ES AB CE E16a_E17a63.16
2492498.80SRP68'protein_coding'321AELoss-52.422AB E3_Aa0
2502508.80SERPINB8'protein_coding'412AELoss-46.522ES AB E3_Aa0
2512518.80THOC5'protein_coding'422AELoss-45.411AB E10_Aa0


Candidate Alternative Expression Genes

The following table lists candidate genes ranked according to 'Score'. Only the top 250 genes appear in each list. For a complete list download the results file provided above. To appear in this list, a 'candidate gene' must be differentially expressed at the gene level (DE) or contain at least one alternatively expressed (AE) feature. The 'Score' is based on the fold change as well as other factors for AE events (multiple features supporting the same event, reciprocity, etc.). The 'Event Type' indicates whether the gene was differentially expressed ('DE') or alternatively expressed 'AE'. 'Direction' refers to the direction (+ve/-ve) of the fold change. 'Gain' (+ve) indicates higher expression in library A than library B and vice versa. 'FC' stands for fold change. '# AE Events' is the number of significant alternative expression events observed for each gene. 'AE Codes' refers to various alternative expression subtypes (listed above). The 'Top Feature' is the most significant AE event observed for an AE gene. 'Adjacency' refers to the number of consecutive AE features (potentially supporting the same isoform). 'Adjacency %' refers to the percent of all AE events for a gene that were adjacent to each other.


RankOverall
Rank
ScoreNameGene
Type
Trans.
Count
Exon
Count
Event
Type
DirectionFC# AE
Events
AE CodesTop FeatureAdjacency
%
1117.31EEF1G'protein_coding'211AELoss-2189.041AB E7_Aa0
2313.92SERPINB7'protein_coding'210AEGain193.584EU ES E2a_E3a100.00
3413.17RNF103'protein_coding'721AELoss-141.4022EU AB IR E3_Ab80.00
4512.94RSL1D1'protein_coding'212AELoss-272.762EU AB E7_Ab0
5612.56KPNB1'protein_coding'122AELoss-215.031AB E13_Aa0
6812.39VIM'protein_coding'19AELoss-66.972EU AB E9_Aa0
71012.16SMARCD2'protein_coding'217AELoss-234.982EU AB E10_Aa0
81112.13SEC61G'protein_coding'26AELoss-206.531AB E1_Da0
91312.04EIF3I'protein_coding'111AELoss-199.831AB E10_Aa0
101412.03SLC7A5'protein_coding'110AELoss-40.422AB E2_Da0
111512.00ARHGAP1'protein_coding'113AELoss-86.091AB E3_Aa0
121611.94KLK10'protein_coding'39AELoss-111.521AB E8_Aa0
131711.94EGFR'protein_coding'431AELoss-112.601AB E11_Aa0
141811.83RPL19'protein_coding'16AELoss-159.441AB E3_Da0
151911.81AC034193.5'protein_coding'12AELoss-188.421EU E1a_E2a0
162011.73IGF2R'protein_coding'250AELoss-42.188EU AB E27_Aa33.33
172211.69RP5-1022P6.2'protein_coding'220AELoss-258.215EU ES AB CE E20_Aa100.00
182311.68PABPC1'protein_coding'216AELoss-190.882EU AB E12_Da0
192411.65CLASP1'protein_coding'450AELoss-76.176EU AB CE E33_Da100.00
202611.58KIAA0652'protein_coding'420AELoss-196.229AB IR E14_Da0
212711.55EIF3E'protein_coding'113AELoss-182.922EU AB E9_Aa0
222811.54HSPA5'protein_coding'18AELoss-86.201AB E7_Aa0
233011.48PTEN'protein_coding'19AELoss-196.652ES AB E3_Aa0
243111.45HSPA8'protein_coding'211AELoss-166.651ES E5a_E9b0
253211.36NET1'protein_coding'316AELoss-126.741ES ENST000003803370
263311.29CALM2'protein_coding'28AELoss-601.971AB E4_Da0
273411.28CTSA'protein_coding'620AELoss-109.221AB E8_Aa0
283511.18MFGE8'protein_coding'28AELoss-103.428EU AB CE E4_Aa0
293711.15TNIP1'protein_coding'221AELoss-1016.421AB E13_Da0
303811.14SREBF2'protein_coding'119AELoss-141.1311AB IR CE E13_Aa0
313911.08UBC'protein_coding'620AELoss-153.751EU E2e_E2f0
324011.05SEC61A1'protein_coding'112AELoss-111.081AB E4_Aa0
334211.00PPP1R14B'protein_coding'14AELoss-75.141AB E2_Aa0
344311.00GSN'protein_coding'936AELoss-68.128EU ES AB E26_Aa100.00
354411.00COPG'protein_coding'124AELoss-71.421AB E20_Aa0
364510.99APLP2'protein_coding'418AELoss-118.342AB E8_Da0
374610.99STAG2'protein_coding'1047AELoss-421.736EU AB E32_Aa75.00
384810.94NCSTN'protein_coding'624AELoss-59.431AB E13_Aa0
394910.94VPS35'protein_coding'117AELoss-135.743EU AB E8_Aa0
405010.88GARS'protein_coding'117AELoss-78.531AB E9_Aa0
415110.85TBCB'protein_coding'28AELoss-105.392AB E6_Aa0
425210.81OPTN'protein_coding'722AELoss-84.743EU AB E16_Aa0
435410.80ENTPD6'protein_coding'721AELoss-131.174EU ES AB E5_Da50.00
445510.80ANXA11'protein_coding'522AELoss-169.4011EU AB CE E13_Aa100.00
455610.79ITPR3'protein_coding'158AELoss-77.1210EU ES AB E16_Aa0.00
465710.79C19orf2'protein_coding'314AELoss-98.293EU AB E9_Aa0
475810.79RAB3GAP1'protein_coding'227AELoss-95.682AB E10_Aa0
485910.78SRI'protein_coding'29AELoss-97.681AB E8_Aa0
496010.77CLSTN1'protein_coding'319AELoss-44.084EU AB E16_Da100.00
506110.76AP2A2'protein_coding'224AELoss-66.144ES AB E13_Aa0
516210.75LAMA3'protein_coding'377AELoss-2.0035EU ES AB E10a_E11a75.76
526310.74PRPF8'protein_coding'246AELoss-55.396EU AB E31_Aa100.00
536410.74KIAA0664'protein_coding'126AELoss-59.137EU AB E24_Aa100.00
546510.72CALM1'protein_coding'16AELoss-131.082EU AB E3_Da0
556610.72ABCE1'protein_coding'118AELoss-120.332EU AB E5_Aa0
566810.62THOC7'protein_coding'210AELoss-104.031AB E5_Aa0
577010.57TPMT'protein_coding'19AELoss-49.756EU AB E8_Da100.00
587110.50GRN'protein_coding'318AELoss-62.953AB E9_Aa0
597210.50GANAB'protein_coding'226AELoss-68.882AB E23_Aa0
607310.49KHSRP'protein_coding'223AELoss-121.196EU ES AB CE E10_Aa0.00
617410.47MYO6'protein_coding'540AELoss-437.0612EU ES AB IR CE E29a_E30a100.00
627510.46GAPDH'protein_coding'621AELoss-60.551AB E9_Da0
637610.39NSMAF'protein_coding'131AELoss-55.625EU AB E6_Aa50.00
647810.32IQGAP1'protein_coding'138AELoss-117.181AB E30_Aa0
657910.31YARS'protein_coding'113AELoss-75.436AB IR CE E2_Da0
668010.30TOM1L1'protein_coding'116AELoss-83.411AB E7_Aa0
678110.27GABARAP'protein_coding'14AELoss-314.501AB E4_Aa0
688210.26POLR2A'protein_coding'129AELoss-57.321AB E15_Aa0
698310.25SMARCA4'protein_coding'236AELoss-95.864EU AB E19_Da0.00
708410.25SERINC2'protein_coding'212AELoss-34.101AB E9_Aa0
718510.24BCAS3'protein_coding'736AELoss-49.6415EU AB CE E23_Aa63.64
728810.20RPL27'protein_coding'26AELoss-74.713EU AB E2_Ab100.00
738910.18DYM'protein_coding'117AELoss-51.382ES AB E15_Da0
749010.17CD44'protein_coding'621AELoss-34.3121EU ES AB CE E18_Aa92.86
759210.11MAP3K7'protein_coding'521AELoss-77.095EU ES AB CE E10_Aa0.00
769310.11CSNK2A1'protein_coding'619AELoss-67.355AB CE E12_Aa0
779510.09RPS4X'protein_coding'29AELoss-277.011AB E6_Da0
789710.07XPO6'protein_coding'124AELoss-48.111AB E4_Aa0
799810.04HSPBP1'protein_coding'212AELoss-96.313EU AB E8_Aa0
80999.99DDX3X'protein_coding'117AELoss-1016.213EU AB E13_Aa0
811009.99PABPC4'protein_coding'419AELoss-27.4516EU AB IR E4_Da75.00
821019.99SEC16A'protein_coding'842AELoss-98.8821EU ES AB IR E15_Aa33.33
831029.98AP3D1'protein_coding'539AELoss-35.905EU AB E28_Aa100.00
841039.94CDH1'protein_coding'317AELoss-44.775EU ES AB E5_Aa0.00
851059.93ANXA2'protein_coding'317AELoss-70.431AB E3_Aa0
861069.91DRG1'protein_coding'19AELoss-64.181AB E2_Da0
871079.90EPAS1'protein_coding'116AELoss-62.375EU AB E4_Aa0.00
881089.87PPA2'protein_coding'715AELoss-52.342AB CE E10_Aa0
891099.86VDAC1'protein_coding'314AELoss-38.423AB E9_Da0
901109.85TLN1'protein_coding'364AELoss-64.867EU AB E53_Da0.00
911129.83MRPL10'protein_coding'26AELoss-56.822AB E5_Aa0
921139.80ITGB1'protein_coding'625AELoss-76.191AB E16_Aa0
931149.80C3'protein_coding'141AELoss-1197.947EU AB E34_Aa25.00
941159.79PPP2R1A'protein_coding'218AELoss-71.981AB E3_Aa0
951169.79SLC44A2'protein_coding'223AELoss-65.861AB E6_Aa0
961179.78KDELR1'protein_coding'15AELoss-39.631AB E4_Aa0
971189.78SAMD4B'protein_coding'220AELoss-75.798EU ES AB CE E8_Aa0.00
981199.77ITGA6'protein_coding'631AELoss-25.0713EU ES AB CE E12_Aa71.43
991209.71RNF185'protein_coding'27AELoss-40.851AB E7_Aa0
1001219.70RPS3'protein_coding'29AELoss-43.581AB E3_Aa0
1011229.70GPR108'protein_coding'118AELoss-71.014AB E17_Aa0
1021239.69FAM62B'protein_coding'327AELoss-283.1512EU ES AB CE E5_Aa50.00
1031249.69TNC'protein_coding'528AELoss-37.4621EU ES AB IR CE E15_Aa33.33
1041259.68FBLN5'protein_coding'314DELoss-214.7617EU ES AB FBLN580.00
1051269.68DDX1'protein_coding'228AELoss-84.571AB E10_Aa0
1061279.68EIF5A'protein_coding'39AELoss-42.771AB E6_Aa0
1071289.66UBR4'protein_coding'7115AELoss-237.6514EU ES AB E72_Aa16.67
1081299.63LGTN'protein_coding'316AELoss-37.291AB E3_Aa0
1091309.62CCNG1'protein_coding'312AELoss-66.521AB E4_Aa0
1101319.61AP1B1'protein_coding'527AELoss-55.771AB E18_Da0
1111339.60TOMM20'protein_coding'15AELoss-64.702EU AB E5_Aa0
1121349.59WIPI1'protein_coding'113AELoss-69.713ES AB E12_Aa0.00
1131359.58COL12A1'protein_coding'471AELoss-17.0616EU AB E16_Aa61.54
1141369.58EIF1AX'protein_coding'29AELoss-78.731ES E3a_E5a0
1151379.57DDOST'protein_coding'111AELoss-43.251AB E3_Da0
1161389.56SNRPG'protein_coding'14AELoss-64.761AB E3_Da0
1171399.55APEX1'protein_coding'27AELoss-213.851AB E5_Aa0
1181409.55CD55'protein_coding'925AELoss-358.473ES AB E4_Ab0
1191429.54EI24'protein_coding'317AELoss-38.403EU AB E8_Aa0
1201449.53DNAJC10'protein_coding'226AELoss-57.494EU ES AB E8_Da50.00
1211469.51FAM49B'protein_coding'326AELoss-70.366EU ES AB E11_Aa33.33
1221479.50HSPA9B'protein_coding'117AELoss-62.581AB E10_Aa0
1231489.49PGM1'protein_coding'313AELoss-34.901AB E5_Aa0
1241499.47NUCKS1'protein_coding'310AELoss-54.601AB E6_Aa0
1251509.45MYH9'protein_coding'551AELoss-64.534AB E34_Aa0
1261519.44UBAP2L'protein_coding'637AELoss-31.446EU AB E12_Da33.33
1271529.44LMAN2'protein_coding'18AELoss-39.581AB E5_Da0
1281539.43PLEC1'protein_coding'839AELoss-23.623EU AB E2_Aa0
1291549.43ATPAF1'protein_coding'29AELoss-41.641AB E5_Aa0
1301569.42WDR3'protein_coding'229AELoss-53.173EU AB E15_Aa0.00
1311579.42TMEM184B'protein_coding'312AELoss-54.152AB E8_Aa0
1321589.42SND1'protein_coding'124AELoss-70.714EU AB E9_Da100.00
1331599.41ATP6V1E1'protein_coding'39AELoss-51.691AB E6_Aa0
1341619.40CNOT7'protein_coding'17AELoss-58.381AB E5_Aa0
1351629.40PSMF1'protein_coding'515AELoss-42.961AB E3_Aa0
1361659.37PSMD2'protein_coding'232AELoss-51.652AB E15_Aa0
1371669.37PDIA3'protein_coding'113AELoss-69.961AB E8_Aa0
1381679.36FRMD4B'protein_coding'225AEGain88.5322EU ES ER5a85.71
1391689.36C19orf10'protein_coding'16AELoss-42.291AB E6_Aa0
1401699.35DNAJC7'protein_coding'114AELoss-68.072EU AB E3_Aa0
1411709.35LAMB2'protein_coding'235AELoss-51.983AB E16_Aa0
1421719.35ATXN1'protein_coding'314AELoss-31.1023EU AB IR CE E2_Da100.00
1431729.33BRI3'protein_coding'13AELoss-32.472AB E2_Aa0
1441739.33TBC1D9'protein_coding'122AELoss-198.626EU AB E21_Aa100.00
1451749.32ITGB4'protein_coding'241AELoss-13.412ES AB E38_Aa0
1461779.28FRMD6'protein_coding'317AEGain102.138EU ES AB ER1a100.00
1471799.27STT3B'protein_coding'116AELoss-218.874EU AB E3_Da0
1481809.27LARP1'protein_coding'322AELoss-36.791AB E18_Aa0
1491829.27SARS'protein_coding'214AELoss-49.464EU AB E12_Aa0.00
1501839.27TIMP2'protein_coding'15AELoss-14.071AB E4_Aa0
1511849.27TMEM30A'protein_coding'29AELoss-369.931AB E5_Da0
1521859.26VPS26A'protein_coding'312AELoss-50.022AB E3_Da0
1531869.26HBS1L'protein_coding'629AELoss-67.988EU ES AB E11_Aa20.00
1541879.26SRRM2'protein_coding'421AELoss-211.773EU AB E7_Aa0.00
1551889.25CREBL1'protein_coding'322AELoss-44.972AB E4_Aa0
1561899.24EIF4G1'protein_coding'938AELoss-55.551AB E17_Aa0
1571909.23AC093283.3'protein_coding'214AELoss-48.745EU AB E5_Aa50.00
1581919.23ACTR10'protein_coding'113AELoss-46.373AB E12_Aa0
1591929.23C3orf10'protein_coding'14AELoss-31.201AB E2_Da0
1601939.23MTCH1'protein_coding'521AELoss-61.111AB E8_Aa0
1611949.21LIMA1'protein_coding'212AELoss-21.539EU AB E6_Aa83.33
1621959.21USO1'protein_coding'124AELoss-186.561AB E10_Aa0
1631969.20PPP1CC'protein_coding'210AELoss-208.971AB E3_Da0
1641979.18HERPUD1'protein_coding'310AELoss-562.501AB E3_Ab0
1651989.17MAN1B1'protein_coding'319AELoss-40.872AB E5_Aa0
1661999.17NDUFA10'protein_coding'420AELoss-43.562AB E4_Aa0
1672019.15MYO1B'protein_coding'536AELoss-89.218EU ES AB E6_Aa83.33
1682029.13STXBP2'protein_coding'226AELoss-57.452AB E12_Aa0
1692039.12FXYD5'protein_coding'414AELoss-33.011AB E3_Aa0
1702049.12C6orf72'protein_coding'29AELoss-62.102AB E4_Aa0
1712059.11HYOU1'protein_coding'228AELoss-60.705EU ES AB E21_Aa0.00
1722069.11SLC25A39'protein_coding'213AELoss-32.332ES AB E12_Aa0
1732079.10AMZ2'protein_coding'613AELoss-26.842AB E3_Aa0
1742089.09CAST'protein_coding'1042AELoss-51.612ES AB E30_Ab0
1752099.09DLST'protein_coding'318AELoss-33.236EU ES AB E14_Da66.67
1762109.09RRAGC'protein_coding'17AELoss-65.821AB E3_Aa0
1772119.09SAPS1'protein_coding'124AELoss-37.114AB E22_Aa0
1782129.07RPS19'protein_coding'16AELoss-64.101AB E6_Aa0
1792139.06C11orf73'protein_coding'15AELoss-43.371AB E4_Aa0
1802159.04CTNNA1'protein_coding'222AELoss-205.541AB E13_Aa0
1812169.04TAX1BP1'protein_coding'322AELoss-110.574EU AB E12_Aa100.00
1822179.03DNM2'protein_coding'526AELoss-34.335EU ES AB E14_Aa33.33
1832189.03EIF3EIP'protein_coding'316AELoss-45.291AB E7_Da0
1842209.02FIP1L1'protein_coding'318AELoss-59.109EU ES AB IR E7_Aa50.00
1852219.01ATXN10'protein_coding'425AELoss-59.003AB E11_Da0
1862229.00SUPT4H1'protein_coding'15AELoss-61.641AB E3_Da0
1872248.97MDH2'protein_coding'19AELoss-29.561AB E4_Aa0
1882258.97COPE'protein_coding'310AELoss-51.181AB E3_Aa0
1892278.94TMBIM1'protein_coding'112AELoss-30.851AB E9_Aa0
1902288.91CD82'protein_coding'210AELoss-30.581AB E7_Da0
1912298.89NOTCH2'protein_coding'236AELoss-58.103EU AB E33_Aa0
1922308.89TFIP11'protein_coding'523AELoss-34.886ES AB E7_Da0
1932318.89SEPT9'protein_coding'315AELoss-27.242EU ES E1a_E3a100.00
1942328.89PARVA'protein_coding'113AELoss-56.801AB E11_Aa0
1952338.87EPRS'protein_coding'132AELoss-46.792EU AB E17_Aa0
1962358.87SF3B2'protein_coding'226AELoss-53.275EU AB E19_Aa50.00
1972368.87MYO1E'protein_coding'128AELoss-41.857AB CE E12_Aa0
1982378.84DNAJC1'protein_coding'315AELoss-26.371AB E10_Da0
1992388.84AC006511.5'protein_coding'18AELoss-40.882AB E3_Aa0
2002398.83PSMA4'protein_coding'19AELoss-184.181AB E5_Da0
2012408.83RELL1'protein_coding'17AELoss-43.2312EU AB CE I6_AR100
2022418.82VCP'protein_coding'117AELoss-161.503AB E4_Aa0
2032428.82CSNK2A2'protein_coding'112AELoss-28.041AB E8_Aa0
2042438.82NCKAP1'protein_coding'232AELoss-45.891AB E24_Aa0
2052448.81PSMC3'protein_coding'112AELoss-48.501AB E5_Aa0
2062458.81SSU72'protein_coding'410AELoss-41.464EU AB E2_Aa0
2072468.81C20orf4'protein_coding'38AELoss-45.411AB E3_Da0
2082478.80RFC1'protein_coding'226AELoss-64.627EU AB E17_Aa75.00
2092488.80DST'protein_coding'9123AEGain291.60104EU ES AB CE E16a_E17a63.16
2102498.80SRP68'protein_coding'321AELoss-52.422AB E3_Aa0
2112508.80SERPINB8'protein_coding'412AELoss-46.522ES AB E3_Aa0
2122518.80THOC5'protein_coding'422AELoss-45.411AB E10_Aa0
2132528.79PRKAG2'protein_coding'217AELoss-29.368EU AB ER3a100.00
2142538.79PTPRG'protein_coding'439AELoss-18.855EU AB E30_Aa0.00
2152548.79FLII'protein_coding'232AELoss-29.115AB E16_Aa0
2162558.78TMEM8'protein_coding'215AELoss-37.872AB E11_Aa0
2172568.77ACAA1'protein_coding'314AELoss-36.432AB E11_Aa0
2182578.77NAP1L1'protein_coding'217AELoss-53.054EU AB E4_Aa0
2192588.77INPP4B'protein_coding'225AELoss-15.069EU ES AB CE E1_Da100.00
2202598.77EXOC7'protein_coding'730AELoss-30.3514EU ES AB E7a_E8b75.00
2212608.76MGAT4B'protein_coding'216AELoss-26.552ES AB E8_Aa0
2222618.76HNRNPC'protein_coding'413AELoss-211.254ES AB E8_Aa0
2232628.75MYO1D'protein_coding'223AELoss-46.583EU AB E6_Aa0
2242638.75DCBLD2'protein_coding'334AELoss-5.954EU ES AB E13_Aa0.00
2252648.75MRPL42'protein_coding'410AELoss-140.371AB E2_Ab0
2262658.75HDDC2'protein_coding'412AELoss-29.831AB E8_Aa0
2272668.74TXNDC4'protein_coding'112AELoss-168.742ES AB E10_Aa0
2282678.73STATIP1'protein_coding'322AELoss-40.672EU AB E11_Aa0
2292688.72ALDOA'protein_coding'320AELoss-43.863EU ES AB E14_Aa0.00
2302698.71GSK3A'protein_coding'213AELoss-40.892ES AB E3_Aa0
2312718.70SERINC1'protein_coding'214AELoss-181.961AB E11_Da0
2322738.70CD81'protein_coding'211AELoss-41.691AB E7_Aa0
2332748.70UBE2E2'protein_coding'28AELoss-41.441AB E3_Aa0
2342758.68TARS'protein_coding'119AELoss-151.831AB E19_Aa0
2352768.67DALRD3'protein_coding'317AELoss-30.842AB E7_Aa0
2362778.67UBE2I'protein_coding'716AELoss-22.047EU AB E7_Da50.00
2372788.67UBQLN1'protein_coding'213AELoss-139.002ES AB E4_Aa0
2382798.66PDCD4'protein_coding'213AELoss-274.771AB E8_Aa0
2392808.65RHEB'protein_coding'18AELoss-133.676AB CE E8_Aa0
2402818.65STOML2'protein_coding'110AELoss-25.314EU AB E10_Aa0
2412828.65SMU1'protein_coding'214AELoss-169.702AB E9_Aa0
2422838.65MYO18A'protein_coding'341AELoss-19.4010EU AB E25_Aa83.33
2432848.64USP14'protein_coding'417AELoss-46.9010EU AB E8_Aa83.33
2442858.63COBLL1'protein_coding'521AELoss-29.923EU AB E13_Ab0.00
2452868.62MSN'protein_coding'215AELoss-139.821AB E8_Aa0
2462878.62PRMT2'protein_coding'826AELoss-29.918EU AB E4_Aa0
2472888.61ATP6AP1'protein_coding'213AELoss-30.061AB E10_Aa0
2482898.60ABR'protein_coding'327AELoss-28.972ES AB E22_Da0
2492928.57CAP1'protein_coding'829AELoss-17.8514EU AB E12_Da75.00
2502938.56RAD17'protein_coding'823AELoss-122.284EU AB E1_Da0
2512948.55LRBA'protein_coding'158AELoss-45.093EU AB E54_Aa0


Candidate Differential and Alternative Expression Genes (Gain ONLY)

The following table lists candidate genes ranked according to 'Score'. Only the top 250 genes appear in each list. For a complete list download the results file provided above. To appear in this list, a 'candidate gene' must be differentially expressed at the gene level (DE) or contain at least one alternatively expressed (AE) feature. The 'Score' is based on the fold change as well as other factors for AE events (multiple features supporting the same event, reciprocity, etc.). The 'Event Type' indicates whether the gene was differentially expressed ('DE') or alternatively expressed 'AE'. 'Direction' refers to the direction (+ve/-ve) of the fold change. 'Gain' (+ve) indicates higher expression in library A than library B and vice versa. 'FC' stands for fold change. '# AE Events' is the number of significant alternative expression events observed for each gene. 'AE Codes' refers to various alternative expression subtypes (listed above). The 'Top Feature' is the most significant AE event observed for an AE gene. 'Adjacency' refers to the number of consecutive AE features (potentially supporting the same isoform). 'Adjacency %' refers to the percent of all AE events for a gene that were adjacent to each other.


RankOverall
Rank
ScoreNameGene
Type
Trans.
Count
Exon
Count
Event
Type
DirectionFC# AE
Events
AE CodesTop FeatureAdjacency
%
1313.92SERPINB7'protein_coding'210AEGain193.584EU ES E2a_E3a100.00
22511.63FN1'protein_coding'1050DEGain3172.970N/AFN1N/A
32911.48COL17A1'protein_coding'358DEGain2861.240N/ACOL17A1N/A
44710.96SPRR1B'protein_coding'24DEGain1994.060N/ASPRR1BN/A
58710.20PNLIPRP3'protein_coding'112DEGain1180.340N/APNLIPRP3N/A
61419.54FST'protein_coding'28DEGain743.810N/AFSTN/A
71459.53KRT14'protein_coding'18DEGain738.900N/AKRT14N/A
81559.42CALML3'protein_coding'11DEGain684.770N/ACALML3N/A
91609.40IGFBP6'protein_coding'14DEGain676.620N/AIGFBP6N/A
101639.39CCND2'protein_coding'15DEGain669.810N/ACCND2N/A
111679.36FRMD4B'protein_coding'225AEGain88.5322EU ES ER5a85.71
121779.28FRMD6'protein_coding'317AEGain102.138EU ES AB ER1a100.00
131819.27KRT6A'protein_coding'19DEGain617.710N/AKRT6AN/A
142199.02MMP28'protein_coding'210DEGain520.000N/AMMP28N/A
152488.80DST'protein_coding'9123AEGain291.60104EU ES AB CE E16a_E17a63.16
162908.60FBLN1'protein_coding'627DEGain387.520N/AFBLN1N/A
172958.55TMEM107'protein_coding'15AEGain6.997EU ER4a83.33
182988.53BNC1'protein_coding'15DEGain368.490N/ABNC1N/A
193108.46MFSD2'protein_coding'215AEGain20.156EU ES E6a_E10a80.00
203208.42FEZ1'protein_coding'212DEGain343.660N/AFEZ1N/A
213258.40CASP7'protein_coding'919AEGain18.774AB E8_Aa0
223298.38MME'protein_coding'326DEGain333.170N/AMMEN/A
233348.35DSG3'protein_coding'116DEGain325.820N/ADSG3N/A
243428.29DDX5'protein_coding'113AEGain37.583ES AB E11a_E13a0
253468.29A2ML1'protein_coding'339DEGain312.010N/AA2ML1N/A
263498.27ZBED2'protein_coding'23DEGain309.290N/AZBED2N/A
273538.26S100A2'protein_coding'58DEGain306.750N/AS100A2N/A
283668.20MRC2'protein_coding'130DEGain294.140N/AMRC2N/A
294018.03HSD11B1'protein_coding'311AEGain22.7338EU AB IR I60.00
304237.99AKAP2'protein_coding'723AEGain16.6814EU ES ER7a76.92
314477.87TOP3B'protein_coding'423AEGain16.7814EU ES AB IR CE E16_Aa75.00
324567.85HEPHL1'protein_coding'120DEGain230.680N/AHEPHL1N/A
334737.77RNASE7'protein_coding'12DEGain218.670N/ARNASE7N/A
344797.72TIMP3'protein_coding'28DEGain211.370N/ATIMP3N/A
354837.69FRMD4A'protein_coding'532AEGain13.2430EU ES AB IR CE E22_Aa95.00
364907.67NT5E'protein_coding'411DEGain203.190N/ANT5EN/A
375117.60S100A4'protein_coding'49AEGain110.2421EU ES AB IR I150.00
385207.57ABLIM1'protein_coding'1540AEGain52.6719EU ES AB CE E11_Ac80.00
395227.56SERPINE1'protein_coding'19DEGain188.240N/ASERPINE1N/A
405257.54PLD5'protein_coding'213DEGain186.210N/APLD5N/A
415267.54IL1B'protein_coding'17DEGain185.960N/AIL1BN/A
425397.50CDA'protein_coding'14DEGain180.870N/ACDAN/A
435427.50MAPK8IP3'protein_coding'340AEGain17.646EU E5a_E6a80.00
445457.48TSC22D3'protein_coding'813AEGain3.022EU ES E1b_E5a100.00
455597.43IVL'protein_coding'22DEGain172.800N/AIVLN/A
465677.41CSTA'protein_coding'13DEGain170.200N/ACSTAN/A
475807.36SPINK6'protein_coding'14DEGain164.390N/ASPINK6N/A
485947.34CLCA2'protein_coding'114DEGain161.990N/ACLCA2N/A
496057.31UPP1'protein_coding'418DEGain159.1210EU ES AB IR UPP10.00
506097.31SCEL'protein_coding'333DEGain158.260N/ASCELN/A
516107.30RUNX1'protein_coding'819AEGain14.354EU CE E1a_E2a0
526167.28PLEKHG6'protein_coding'318AEGain8.1413EU AB IR CE E12_Aa0.00
536197.28C6orf105'protein_coding'311DEGain154.890N/AC6orf105N/A
546297.24IQCG'protein_coding'112AEGain3.8316EU AB IR CE I2_AR590.91
556567.15SLC6A15'protein_coding'315DEGain142.260N/ASLC6A15N/A
566577.15PITX1'protein_coding'13DEGain141.610N/APITX1N/A
576717.11AL353732.14'protein_coding'14DEGain138.250N/AAL353732.14N/A
586787.08FOLR3'protein_coding'16DEGain135.420N/AFOLR3N/A
596797.07SVIL'protein_coding'342AEGain7.8310EU ES AB E4a_E5a28.57
606957.04HAS2'protein_coding'14DEGain131.290N/AHAS2N/A
617206.98NR1H3'protein_coding'616AEGain10.763EU AB ER1b100.00
627366.95CASP14'protein_coding'16DEGain123.540N/ACASP14N/A
637396.95RGL1'protein_coding'323AEGain4.374EU AB ER2a0.00
647416.94IGFL3'protein_coding'14DEGain122.480N/AIGFL3N/A
657436.93GALNT5'protein_coding'110DEGain121.640N/AGALNT5N/A
667546.89CCND3'protein_coding'37AEGain13.553EU ES ENST0000037299150.00
677636.87IGFBP2'protein_coding'14DEGain117.250N/AIGFBP2N/A
687666.86SERPINB5'protein_coding'17DEGain116.511AB SERPINB50
697716.85XXyac-R12DG2.2'protein_coding'417AEGain3.5835EU AB IR I3_SR550.00
707886.80CXCL3'protein_coding'14AEGain3.123EU IR I3_AR10
717896.80FLRT2'protein_coding'12DEGain111.420N/AFLRT2N/A
727986.78ADAM23'protein_coding'328DEGain109.780N/AADAM23N/A
738046.76HGSNAT'protein_coding'320AEGain20.262ES AB E9a_E13a0
748076.76KRT17'protein_coding'210DEGain108.281AB KRT170
758496.67CDH4'protein_coding'116DEGain102.060N/ACDH4N/A
768566.66TMCC3'protein_coding'14DEGain101.310N/ATMCC3N/A
778616.65HNRNPA1'protein_coding'213AEGain12.201ES E6a_E9a0
788676.64TNNT1'protein_coding'216DEGain99.600N/ATNNT1N/A
798766.61CENTG2'protein_coding'524AEGain11.6114EU AB CE E2a_E3a0
808796.60PRMT8'protein_coding'214DEGain97.290N/APRMT8N/A
818826.60C5orf45'protein_coding'512AEGain8.0617EU ES AB IR E2a_E4a0.00
828936.57PKP1'protein_coding'317DEGain95.235EU ES AB CE PKP10.00
839016.56CARHSP1'protein_coding'25AEGain4.743AB CE I2_AR90
849056.55ATP12A'protein_coding'224DEGain93.910N/AATP12AN/A
859066.55LRP1'protein_coding'392DEGain93.860N/ALRP1N/A
869076.55TP63'protein_coding'717DEGain93.410N/ATP63N/A
879116.54HTRA1'protein_coding'19DEGain92.850N/AHTRA1N/A
889336.50IL23A'protein_coding'14AEGain8.025EU AB IR I1_SR10
899346.50TFPI2'protein_coding'15DEGain90.200N/ATFPI2N/A
909456.48KIF9'protein_coding'323AEGain12.1627EU ES AB IR CE E15_Da50.00
919506.48MPDU1'protein_coding'417AEGain13.382AB E8_Aa0
929916.38SERPINB2'protein_coding'211DEGain83.510N/ASERPINB2N/A
939956.38CSPG2'protein_coding'415DEGain83.070N/ACSPG2N/A
949966.37NRCAM'protein_coding'638DEGain82.970N/ANRCAMN/A
959996.37DKK3'protein_coding'311DEGain82.780N/ADKK3N/A
9610196.33FAM83A'protein_coding'38DEGain80.270N/AFAM83AN/A
9710276.32CDH13'protein_coding'114DEGain79.664EU CDH1333.33
9810296.31AHNAK2'protein_coding'17DEGain79.490N/AAHNAK2N/A
9910516.27FAT2'protein_coding'123DEGain77.270N/AFAT2N/A
10010526.27CRCT1'protein_coding'23DEGain77.160N/ACRCT1N/A
10110706.25CPT1B'protein_coding'534AEGain7.664EU ES AB E12a_E15a0.00
10210726.25SPRR3'protein_coding'23DEGain76.090N/ASPRR3N/A
10310836.23SPRR1A'protein_coding'23DEGain75.040N/ASPRR1AN/A
10410916.22COPZ2'protein_coding'110DEGain74.720N/ACOPZ2N/A
10510926.22GDF15'protein_coding'12DEGain74.590N/AGDF15N/A
10611006.21ARHGEF3'protein_coding'213AEGain22.428EU ES ENST00000296315100.00
10711046.20SDK2'protein_coding'651DEGain73.650N/ASDK2N/A
10811146.19CD109'protein_coding'133DEGain72.800N/ACD109N/A
10911156.18VPS39'protein_coding'226AEGain21.025EU ES AB E2a_E3a100.00
11011186.18C16orf74'protein_coding'14DEGain72.340N/AC16orf74N/A
11111296.16RCC1'protein_coding'620AEGain9.7114EU AB IR E2_Aa0
11211346.14WNT7A'protein_coding'14DEGain70.480N/AWNT7AN/A
11311356.14LAMB1'protein_coding'440DEGain70.440N/ALAMB1N/A
11411576.10MPPE1'protein_coding'517AEGain43.566AB IR E12_Aa0
11511586.10SRPX'protein_coding'211DEGain68.550N/ASRPXN/A
11611616.10HES1'protein_coding'14AEGain2.271CE I3_AR20
11711626.10IL6ST'protein_coding'1029AEGain7.754ES CE I18_AR40.00
11811686.09NID1'protein_coding'220DEGain67.960N/ANID1N/A
11911726.08DSC3'protein_coding'217DEGain67.730N/ADSC3N/A
12011756.07FAP'protein_coding'126DEGain67.340N/AFAPN/A
12111806.07CA12'protein_coding'211AEGain30.063EU ES E8a_E11a50.00
12211886.06EPGN'protein_coding'14DEGain66.540N/AEPGNN/A
12311956.04SLC37A2'protein_coding'421DEGain65.810N/ASLC37A2N/A
12411976.04HK1'protein_coding'626AEGain58.551AB E5_Aa0
12512106.02IL20RB'protein_coding'27DEGain64.765EU ES AB IL20RB66.67
12612196.00L1CAM'protein_coding'738DEGain64.200N/AL1CAMN/A
12712216.00C9orf125'protein_coding'38DEGain64.160N/AC9orf125N/A
12812345.98GPR175'protein_coding'311AEGain9.494ES AB E6a_E11a0
12912585.94INPP5D'protein_coding'128DEGain61.520N/AINPP5DN/A
13012645.93FAM25A'protein_coding'13DEGain60.950N/AFAM25AN/A
13112775.91TNS4'protein_coding'417DEGain60.113EU AB TNS40
13212795.91FBN2'protein_coding'165DEGain60.050N/AFBN2N/A
13312815.90NCF2'protein_coding'319DEGain59.900N/ANCF2N/A
13412835.90CCDC84'protein_coding'111AEGain11.7416AB IR CE I7_AR20
13512885.90SDC1'protein_coding'310DEGain59.621AB SDC10
13612985.88CFLAR'protein_coding'816AEGain8.1314EU AB IR CE I13_AR1100.00
13713035.87C2orf67'protein_coding'115AEGain6.2031EU AB IR CE I7_AR228.57
13813045.87PCDH7'protein_coding'26DEGain58.550N/APCDH7N/A
13913075.87ODZ3'protein_coding'127DEGain58.290N/AODZ3N/A
14013105.86RP11-314P12.3'processed_pseudogene'11DEGain58.180N/ARP11-314P12.3N/A
14113115.86AC135891.3'protein_coding'12DEGain58.010N/AAC135891.3N/A
14213135.86ZNF764'protein_coding'25AEGain10.442AB E1_Da0
14313205.84PAQR5'protein_coding'211AEGain15.3013EU CE E7a_E8a81.82
14413225.84SLIT3'protein_coding'237DEGain57.360N/ASLIT3N/A
14513235.84ANXA8L2'protein_coding'214DEGain57.300N/AANXA8L2N/A
14613295.83LGALS1'protein_coding'14DEGain57.080N/ALGALS1N/A
14713345.83ARID4A'protein_coding'326AEGain5.933EU AB E24_Aa0
14813425.82MAP3K13'protein_coding'218AEGain4.446EU AB CE I15_SR20.00
14913515.79GNL3L'protein_coding'427AEGain8.623EU ES AB E13a_E15a0.00
15013575.78NEFL'protein_coding'311DEGain55.010N/ANEFLN/A
15113585.78RAB40B'protein_coding'16AEGain11.841ES E4a_E6a0
15213655.77C1orf91'protein_coding'619AEGain12.237EU AB E3_Da50.00
15313665.76RAET1G'protein_coding'29DEGain54.280N/ARAET1GN/A
15413705.75GJB5'protein_coding'12DEGain53.950N/AGJB5N/A
15513745.75PNKD'protein_coding'312AEGain7.2518EU AB IR I20.00
15613805.74MTP18'protein_coding'37AEGain11.1510AB IR E2_Aa0
15713845.74SPRR2A'protein_coding'24DEGain53.380N/ASPRR2AN/A
15813965.73NRN1'protein_coding'13DEGain53.010N/ANRN1N/A
15913995.73SYT15'protein_coding'516AEGain12.5023EU AB IR E3_Ab0.00
16014025.72TSC22D1'protein_coding'25AEGain2.712EU ES ER1a100.00
16114045.71DOM3Z'protein_coding'311AEGain10.1210EU AB IR E1a_E1d0
16214185.69USP54'protein_coding'425AEGain2.749EU AB E20_Aa25.00
16314315.67ARHGAP25'protein_coding'415DEGain50.860N/AARHGAP25N/A
16414325.67hsa-mir-205'miRNA'11DEGain50.850N/Ahsa-mir-205N/A
16514405.65RBM6'protein_coding'121AEGain9.583ES CE I2_AR50
16614465.65GPR115'protein_coding'314DEGain50.220N/AGPR115N/A
16714515.64IFNE'protein_coding'11DEGain49.760N/AIFNEN/A
16814555.63LASS3'protein_coding'216DEGain49.610N/ALASS3N/A
16914565.63HS3ST2'protein_coding'12DEGain49.510N/AHS3ST2N/A
17014575.63NCOA3'protein_coding'531AEGain8.958EU ES AB CE E8a_E10b33.33
17114665.61PITPNM3'protein_coding'120DEGain48.980N/APITPNM3N/A
17214675.61VGLL3'protein_coding'25DEGain48.920N/AVGLL3N/A
17314725.61WDR54'protein_coding'313AEGain31.0718EU AB E2a_E3a71.43
17414735.61BCAT1'protein_coding'213DEGain48.810N/ABCAT1N/A
17514765.61SLC22A15'protein_coding'315DEGain48.780N/ASLC22A15N/A
17614815.61PGLYRP3'protein_coding'17DEGain48.700N/APGLYRP3N/A
17714835.60HSD17B1'protein_coding'16AEGain16.7817EU ES AB IR CE E4a_E5a100.00
17814845.60HERC2'protein_coding'193AEGain10.4613EU ES AB E9_Da50.00
17914855.60FHL1'protein_coding'714DEGain48.500N/AFHL1N/A
18014935.59KRT10'protein_coding'18AEGain25.8112EU E2a_E3a100.00
18114985.58BMP6'protein_coding'17DEGain47.880N/ABMP6N/A
18215005.58PTBP1'protein_coding'316AEGain10.041ES E11a_E13a0
18315035.58SYNC1'protein_coding'38AEGain16.066EU ES AB ER2b75.00
18415175.55ECHDC2'protein_coding'314AEGain10.0613AB IR I1_SR20
18515185.55ADAM19'protein_coding'224DEGain46.810N/AADAM19N/A
18615255.54CNTN1'protein_coding'324DEGain46.450N/ACNTN1N/A
18715285.53AL732437.12'protein_coding'13DEGain46.260N/AAL732437.12N/A
18815455.51PILRB'protein_coding'118AEGain2.3213EU AB IR I5100.00
18915505.50RGS20'protein_coding'412DEGain45.380N/ARGS20N/A
19015525.50RP11-236F9.4'unprocessed_pseudogene'18AEGain7.835AB CE I6_AR20
19115555.49ZNF749'protein_coding'25AEGain12.095EU AB E2a_E3a66.67
19215605.48APOL1'protein_coding'39AEGain3.2719EU ES AB CE I5_SR162.50
19315625.48ARTN'protein_coding'38DEGain44.740N/AARTNN/A
19415635.48PROCR'protein_coding'28DEGain44.730N/APROCRN/A
19515645.48PACSIN2'protein_coding'517AEGain6.611ES E2a_E4a0
19615655.48KCNG1'protein_coding'26DEGain44.520N/AKCNG1N/A
19715685.47SH3TC1'protein_coding'322DEGain44.290N/ASH3TC1N/A
19815705.47ALDH1L2'protein_coding'123DEGain44.260N/AALDH1L2N/A
19915735.46CALB1'protein_coding'111DEGain44.120N/ACALB1N/A
20015945.42C1orf116'protein_coding'14DEGain20.202EU ES C1orf116100.00
20116015.41CCDC8'protein_coding'11DEGain42.590N/ACCDC8N/A
20216095.40SEMA4B'protein_coding'217AEGain36.771ES E11a_E13a0
20316105.40SORT1'protein_coding'120AEGain11.5125EU AB IR CE I14_SR166.67
20416125.40CLSTN3'protein_coding'220AEGain8.411ES E10a_E13a0
20516255.38ZCCHC4'protein_coding'113AEGain8.293EU AB E6_Da0
20616305.37PPP2R3B'protein_coding'416AEGain10.402EU AB E5_Aa0
20716315.37C20orf102'protein_coding'34DEGain41.350N/AC20orf102N/A
20816345.37ZFYVE27'protein_coding'716AEGain10.044ES CE E5a_E7a0
20916375.37IL1F9'protein_coding'25DEGain41.250N/AIL1F9N/A
21016405.36SPARC'protein_coding'110DEGain41.170N/ASPARCN/A
21116425.36SNAI2'protein_coding'26DEGain41.130N/ASNAI2N/A
21216445.36COL7A1'protein_coding'1118DEGain41.080N/ACOL7A1N/A
21316495.35SMARCD3'protein_coding'316AEGain10.634AB E13_Da0
21416605.34C16orf7'protein_coding'322AEGain10.6820EU AB IR CE E8_Da0.00
21516615.34SPRR2D'protein_coding'49DEGain40.550N/ASPRR2DN/A
21616635.34C19orf33'protein_coding'14DEGain40.500N/AC19orf33N/A
21716715.33GPR1'protein_coding'25DEGain40.150N/AGPR1N/A
21816755.32SLC2A3'protein_coding'212DEGain40.060N/ASLC2A3N/A
21916785.32SCAND2'protein_coding'25AEGain9.336AB IR E2_Aa0
22016985.30AP000926.6'protein_coding'28DEGain39.330N/AAP000926.6N/A
22117035.29SBNO2'protein_coding'341AEGain6.463EU ES AB E30a_E32a0.00
22217095.29COX15'protein_coding'211AEGain9.6921ES AB IR CE E4_Aa0
22317155.28LCE1F'protein_coding'11DEGain38.820N/ALCE1FN/A
22417215.27AC068228.8'protein_coding'13DEGain38.570N/AAC068228.8N/A
22517225.27AC091565.10'pseudogene'123AEGain5.757EU IR I18_SR20
22617315.26HERC2P2'protein_coding'128AEGain9.137EU IR CE I23_AR30.00
22717325.26ANKRD19'protein_coding'19DEGain38.200N/AANKRD19N/A
22817335.25RNMTL1'protein_coding'14AEGain10.0710EU AB IR E4_Aa0.00
22917355.25AC090625.5'protein_coding'314DEGain38.110N/AAC090625.5N/A
23017435.24RAET1E'protein_coding'39DEGain37.910N/ARAET1EN/A
23117475.23TMTC1'protein_coding'323DEGain37.630N/ATMTC1N/A
23217505.23PDCD10'protein_coding'312AEGain5.285EU ES E1a_E2a75.00
23317545.23HS3ST1'protein_coding'12DEGain18.172EU HS3ST1100.00
23417565.23PMS1'protein_coding'721AEGain8.893EU AB ENST000003748260.00
23517635.22ABCG1'protein_coding'727DEGain37.180N/AABCG1N/A
23617655.21KRT5'protein_coding'19DEGain37.020N/AKRT5N/A
23717755.19SYT14'protein_coding'517DEGain36.610N/ASYT14N/A
23817775.19EBP'protein_coding'15AEGain28.972IR I1_AR10
23917815.18FAM70B'protein_coding'212DEGain36.350N/AFAM70BN/A
24017995.16SCNN1B'protein_coding'215DEGain35.670N/ASCNN1BN/A
24118115.14SLC30A4'protein_coding'18AEGain4.9717EU AB E2a_E3a40.00
24218175.14GJB3'protein_coding'24DEGain35.160N/AGJB3N/A
24318195.13MCM3'protein_coding'220AEGain8.081EU E16a_E17a0
24418205.13DCLRE1C'protein_coding'1229AEGain6.554AB CE E17_Aa0
24518245.13GRHL3'protein_coding'623DEGain35.080N/AGRHL3N/A
24618255.13SEMA3A'protein_coding'117DEGain35.080N/ASEMA3AN/A
24718355.11MARK3'protein_coding'321AEGain8.214EU AB E17a_E18a100.00
24818365.11AC008676.6'protein_coding'16DEGain34.640N/AAC008676.6N/A
24918575.09NFASC'protein_coding'1548AEGain20.4024EU ES AB E21_Db61.90
25018695.07PLCH2'protein_coding'633DEGain33.630N/APLCH2N/A
25118725.07ODZ2'protein_coding'235DEGain33.510N/AODZ2N/A


Candidate Differential and Alternative Expression Genes (Loss ONLY)

The following table lists candidate genes ranked according to 'Score'. Only the top 250 genes appear in each list. For a complete list download the results file provided above. To appear in this list, a 'candidate gene' must be differentially expressed at the gene level (DE) or contain at least one alternatively expressed (AE) feature. The 'Score' is based on the fold change as well as other factors for AE events (multiple features supporting the same event, reciprocity, etc.). The 'Event Type' indicates whether the gene was differentially expressed ('DE') or alternatively expressed 'AE'. 'Direction' refers to the direction (+ve/-ve) of the fold change. 'Gain' (+ve) indicates higher expression in library A than library B and vice versa. 'FC' stands for fold change. '# AE Events' is the number of significant alternative expression events observed for each gene. 'AE Codes' refers to various alternative expression subtypes (listed above). The 'Top Feature' is the most significant AE event observed for an AE gene. 'Adjacency' refers to the number of consecutive AE features (potentially supporting the same isoform). 'Adjacency %' refers to the percent of all AE events for a gene that were adjacent to each other.


RankOverall
Rank
ScoreNameGene
Type
Trans.
Count
Exon
Count
Event
Type
DirectionFC# AE
Events
AE CodesTop FeatureAdjacency
%
1117.31EEF1G'protein_coding'211AELoss-2189.041AB E7_Aa0
2214.32LTF'protein_coding'117DELoss-20507.970N/ALTFN/A
3413.17RNF103'protein_coding'721AELoss-141.4022EU AB IR E3_Ab80.00
4512.94RSL1D1'protein_coding'212AELoss-272.762EU AB E7_Ab0
5612.56KPNB1'protein_coding'122AELoss-215.031AB E13_Aa0
6712.43C4orf7'protein_coding'15DELoss-5527.250N/AC4orf7N/A
7812.39VIM'protein_coding'19AELoss-66.972EU AB E9_Aa0
8912.33CCL2'protein_coding'13DELoss-5164.270N/ACCL2N/A
91012.16SMARCD2'protein_coding'217AELoss-234.982EU AB E10_Aa0
101112.13SEC61G'protein_coding'26AELoss-206.531AB E1_Da0
111212.11SLC34A2'protein_coding'113DELoss-4416.610N/ASLC34A2N/A
121312.04EIF3I'protein_coding'111AELoss-199.831AB E10_Aa0
131412.03SLC7A5'protein_coding'110AELoss-40.422AB E2_Da0
141512.00ARHGAP1'protein_coding'113AELoss-86.091AB E3_Aa0
151611.94KLK10'protein_coding'39AELoss-111.521AB E8_Aa0
161711.94EGFR'protein_coding'431AELoss-112.601AB E11_Aa0
171811.83RPL19'protein_coding'16AELoss-159.441AB E3_Da0
181911.81AC034193.5'protein_coding'12AELoss-188.421EU E1a_E2a0
192011.73IGF2R'protein_coding'250AELoss-42.188EU AB E27_Aa33.33
202111.73CXCL5'protein_coding'25DELoss-3397.200N/ACXCL5N/A
212211.69RP5-1022P6.2'protein_coding'220AELoss-258.215EU ES AB CE E20_Aa100.00
222311.68PABPC1'protein_coding'216AELoss-190.882EU AB E12_Da0
232411.65CLASP1'protein_coding'450AELoss-76.176EU AB CE E33_Da100.00
242611.58KIAA0652'protein_coding'420AELoss-196.229AB IR E14_Da0
252711.55EIF3E'protein_coding'113AELoss-182.922EU AB E9_Aa0
262811.54HSPA5'protein_coding'18AELoss-86.201AB E7_Aa0
273011.48PTEN'protein_coding'19AELoss-196.652ES AB E3_Aa0
283111.45HSPA8'protein_coding'211AELoss-166.651ES E5a_E9b0
293211.36NET1'protein_coding'316AELoss-126.741ES ENST000003803370
303311.29CALM2'protein_coding'28AELoss-601.971AB E4_Da0
313411.28CTSA'protein_coding'620AELoss-109.221AB E8_Aa0
323511.18MFGE8'protein_coding'28AELoss-103.428EU AB CE E4_Aa0
333611.16CHI3L1'protein_coding'212DELoss-2283.760N/ACHI3L1N/A
343711.15TNIP1'protein_coding'221AELoss-1016.421AB E13_Da0
353811.14SREBF2'protein_coding'119AELoss-141.1311AB IR CE E13_Aa0
363911.08UBC'protein_coding'620AELoss-153.751EU E2e_E2f0
374011.05SEC61A1'protein_coding'112AELoss-111.081AB E4_Aa0
384111.02PROM1'protein_coding'127DELoss-2078.220N/APROM1N/A
394211.00PPP1R14B'protein_coding'14AELoss-75.141AB E2_Aa0
404311.00GSN'protein_coding'936AELoss-68.128EU ES AB E26_Aa100.00
414411.00COPG'protein_coding'124AELoss-71.421AB E20_Aa0
424510.99APLP2'protein_coding'418AELoss-118.342AB E8_Da0
434610.99STAG2'protein_coding'1047AELoss-421.736EU AB E32_Aa75.00
444810.94NCSTN'protein_coding'624AELoss-59.431AB E13_Aa0
454910.94VPS35'protein_coding'117AELoss-135.743EU AB E8_Aa0
465010.88GARS'protein_coding'117AELoss-78.531AB E9_Aa0
475110.85TBCB'protein_coding'28AELoss-105.392AB E6_Aa0
485210.81OPTN'protein_coding'722AELoss-84.743EU AB E16_Aa0
495310.81KRT19'protein_coding'16DELoss-1789.230N/AKRT19N/A
505410.80ENTPD6'protein_coding'721AELoss-131.174EU ES AB E5_Da50.00
515510.80ANXA11'protein_coding'522AELoss-169.4011EU AB CE E13_Aa100.00
525610.79ITPR3'protein_coding'158AELoss-77.1210EU ES AB E16_Aa0.00
535710.79C19orf2'protein_coding'314AELoss-98.293EU AB E9_Aa0
545810.79RAB3GAP1'protein_coding'227AELoss-95.682AB E10_Aa0
555910.78SRI'protein_coding'29AELoss-97.681AB E8_Aa0
566010.77CLSTN1'protein_coding'319AELoss-44.084EU AB E16_Da100.00
576110.76AP2A2'protein_coding'224AELoss-66.144ES AB E13_Aa0
586210.75LAMA3'protein_coding'377AELoss-2.0035EU ES AB E10a_E11a75.76
596310.74PRPF8'protein_coding'246AELoss-55.396EU AB E31_Aa100.00
606410.74KIAA0664'protein_coding'126AELoss-59.137EU AB E24_Aa100.00
616510.72CALM1'protein_coding'16AELoss-131.082EU AB E3_Da0
626610.72ABCE1'protein_coding'118AELoss-120.332EU AB E5_Aa0
636710.64KIT'protein_coding'121DELoss-1591.250N/AKITN/A
646810.62THOC7'protein_coding'210AELoss-104.031AB E5_Aa0
656910.59OLFM4'protein_coding'15DELoss-1546.680N/AOLFM4N/A
667010.57TPMT'protein_coding'19AELoss-49.756EU AB E8_Da100.00
677110.50GRN'protein_coding'318AELoss-62.953AB E9_Aa0
687210.50GANAB'protein_coding'226AELoss-68.882AB E23_Aa0
697310.49KHSRP'protein_coding'223AELoss-121.196EU ES AB CE E10_Aa0.00
707410.47MYO6'protein_coding'540AELoss-437.0612EU ES AB IR CE E29a_E30a100.00
717510.46GAPDH'protein_coding'621AELoss-60.551AB E9_Da0
727610.39NSMAF'protein_coding'131AELoss-55.625EU AB E6_Aa50.00
737710.33TNFAIP2'protein_coding'111DELoss-1287.870N/ATNFAIP2N/A
747810.32IQGAP1'protein_coding'138AELoss-117.181AB E30_Aa0
757910.31YARS'protein_coding'113AELoss-75.436AB IR CE E2_Da0
768010.30TOM1L1'protein_coding'116AELoss-83.411AB E7_Aa0
778110.27GABARAP'protein_coding'14AELoss-314.501AB E4_Aa0
788210.26POLR2A'protein_coding'129AELoss-57.321AB E15_Aa0
798310.25SMARCA4'protein_coding'236AELoss-95.864EU AB E19_Da0.00
808410.25SERINC2'protein_coding'212AELoss-34.101AB E9_Aa0
818510.24BCAS3'protein_coding'736AELoss-49.6415EU AB CE E23_Aa63.64
828610.21MGP'protein_coding'14DELoss-1183.970N/AMGPN/A
838810.20RPL27'protein_coding'26AELoss-74.713EU AB E2_Ab100.00
848910.18DYM'protein_coding'117AELoss-51.382ES AB E15_Da0
859010.17CD44'protein_coding'621AELoss-34.3121EU ES AB CE E18_Aa92.86
869110.11AZGP1'protein_coding'14DELoss-1108.920N/AAZGP1N/A
879210.11MAP3K7'protein_coding'521AELoss-77.095EU ES AB CE E10_Aa0.00
889310.11CSNK2A1'protein_coding'619AELoss-67.355AB CE E12_Aa0
899410.10C10orf81'protein_coding'622DELoss-1095.770N/AC10orf81N/A
909510.09RPS4X'protein_coding'29AELoss-277.011AB E6_Da0
919610.07HLA-DRA'protein_coding'28DELoss-1077.200N/AHLA-DRAN/A
929710.07XPO6'protein_coding'124AELoss-48.111AB E4_Aa0
939810.04HSPBP1'protein_coding'212AELoss-96.313EU AB E8_Aa0
94999.99DDX3X'protein_coding'117AELoss-1016.213EU AB E13_Aa0
951009.99PABPC4'protein_coding'419AELoss-27.4516EU AB IR E4_Da75.00
961019.99SEC16A'protein_coding'842AELoss-98.8821EU ES AB IR E15_Aa33.33
971029.98AP3D1'protein_coding'539AELoss-35.905EU AB E28_Aa100.00
981039.94CDH1'protein_coding'317AELoss-44.775EU ES AB E5_Aa0.00
991049.93CXCL6'protein_coding'14DELoss-974.000N/ACXCL6N/A
1001059.93ANXA2'protein_coding'317AELoss-70.431AB E3_Aa0
1011069.91DRG1'protein_coding'19AELoss-64.181AB E2_Da0
1021079.90EPAS1'protein_coding'116AELoss-62.375EU AB E4_Aa0.00
1031089.87PPA2'protein_coding'715AELoss-52.342AB CE E10_Aa0
1041099.86VDAC1'protein_coding'314AELoss-38.423AB E9_Da0
1051109.85TLN1'protein_coding'364AELoss-64.867EU AB E53_Da0.00
1061119.84PDE4B'protein_coding'524DELoss-915.880N/APDE4BN/A
1071129.83MRPL10'protein_coding'26AELoss-56.822AB E5_Aa0
1081139.80ITGB1'protein_coding'625AELoss-76.191AB E16_Aa0
1091149.80C3'protein_coding'141AELoss-1197.947EU AB E34_Aa25.00
1101159.79PPP2R1A'protein_coding'218AELoss-71.981AB E3_Aa0
1111169.79SLC44A2'protein_coding'223AELoss-65.861AB E6_Aa0
1121179.78KDELR1'protein_coding'15AELoss-39.631AB E4_Aa0
1131189.78SAMD4B'protein_coding'220AELoss-75.798EU ES AB CE E8_Aa0.00
1141199.77ITGA6'protein_coding'631AELoss-25.0713EU ES AB CE E12_Aa71.43
1151209.71RNF185'protein_coding'27AELoss-40.851AB E7_Aa0
1161219.70RPS3'protein_coding'29AELoss-43.581AB E3_Aa0
1171229.70GPR108'protein_coding'118AELoss-71.014AB E17_Aa0
1181239.69FAM62B'protein_coding'327AELoss-283.1512EU ES AB CE E5_Aa50.00
1191249.69TNC'protein_coding'528AELoss-37.4621EU ES AB IR CE E15_Aa33.33
1201259.68FBLN5'protein_coding'314DELoss-214.7617EU ES AB FBLN580.00
1211269.68DDX1'protein_coding'228AELoss-84.571AB E10_Aa0
1221279.68EIF5A'protein_coding'39AELoss-42.771AB E6_Aa0
1231289.66UBR4'protein_coding'7115AELoss-237.6514EU ES AB E72_Aa16.67
1241299.63LGTN'protein_coding'316AELoss-37.291AB E3_Aa0
1251309.62CCNG1'protein_coding'312AELoss-66.521AB E4_Aa0
1261319.61AP1B1'protein_coding'527AELoss-55.771AB E18_Da0
1271329.61TNF'protein_coding'14DELoss-780.640N/ATNFN/A
1281339.60TOMM20'protein_coding'15AELoss-64.702EU AB E5_Aa0
1291349.59WIPI1'protein_coding'113AELoss-69.713ES AB E12_Aa0.00
1301359.58COL12A1'protein_coding'471AELoss-17.0616EU AB E16_Aa61.54
1311369.58EIF1AX'protein_coding'29AELoss-78.731ES E3a_E5a0
1321379.57DDOST'protein_coding'111AELoss-43.251AB E3_Da0
1331389.56SNRPG'protein_coding'14AELoss-64.761AB E3_Da0
1341399.55APEX1'protein_coding'27AELoss-213.851AB E5_Aa0
1351409.55CD55'protein_coding'925AELoss-358.473ES AB E4_Ab0
1361429.54EI24'protein_coding'317AELoss-38.403EU AB E8_Aa0
1371439.53TNIP3'protein_coding'213DELoss-741.490N/ATNIP3N/A
1381449.53DNAJC10'protein_coding'226AELoss-57.494EU ES AB E8_Da50.00
1391469.51FAM49B'protein_coding'326AELoss-70.366EU ES AB E11_Aa33.33
1401479.50HSPA9B'protein_coding'117AELoss-62.581AB E10_Aa0
1411489.49PGM1'protein_coding'313AELoss-34.901AB E5_Aa0
1421499.47NUCKS1'protein_coding'310AELoss-54.601AB E6_Aa0
1431509.45MYH9'protein_coding'551AELoss-64.534AB E34_Aa0
1441519.44UBAP2L'protein_coding'637AELoss-31.446EU AB E12_Da33.33
1451529.44LMAN2'protein_coding'18AELoss-39.581AB E5_Da0
1461539.43PLEC1'protein_coding'839AELoss-23.623EU AB E2_Aa0
1471549.43ATPAF1'protein_coding'29AELoss-41.641AB E5_Aa0
1481569.42WDR3'protein_coding'229AELoss-53.173EU AB E15_Aa0.00
1491579.42TMEM184B'protein_coding'312AELoss-54.152AB E8_Aa0
1501589.42SND1'protein_coding'124AELoss-70.714EU AB E9_Da100.00
1511599.41ATP6V1E1'protein_coding'39AELoss-51.691AB E6_Aa0
1521619.40CNOT7'protein_coding'17AELoss-58.381AB E5_Aa0
1531629.40PSMF1'protein_coding'515AELoss-42.961AB E3_Aa0
1541649.38C8orf4'protein_coding'11DELoss-668.320N/AC8orf4N/A
1551659.37PSMD2'protein_coding'232AELoss-51.652AB E15_Aa0
1561669.37PDIA3'protein_coding'113AELoss-69.961AB E8_Aa0
1571689.36C19orf10'protein_coding'16AELoss-42.291AB E6_Aa0
1581699.35DNAJC7'protein_coding'114AELoss-68.072EU AB E3_Aa0
1591709.35LAMB2'protein_coding'235AELoss-51.983AB E16_Aa0
1601719.35ATXN1'protein_coding'314AELoss-31.1023EU AB IR CE E2_Da100.00
1611729.33BRI3'protein_coding'13AELoss-32.472AB E2_Aa0
1621739.33TBC1D9'protein_coding'122AELoss-198.626EU AB E21_Aa100.00
1631749.32ITGB4'protein_coding'241AELoss-13.412ES AB E38_Aa0
1641759.32WFDC2'protein_coding'46DELoss-640.480N/AWFDC2N/A
1651769.29AF347015.1'Mt_tRNA'11DELoss-624.260N/AAF347015.1N/A
1661789.28AF347015.1'Mt_tRNA'11DELoss-620.080N/AAF347015.1N/A
1671799.27STT3B'protein_coding'116AELoss-218.874EU AB E3_Da0
1681809.27LARP1'protein_coding'322AELoss-36.791AB E18_Aa0
1691829.27SARS'protein_coding'214AELoss-49.464EU AB E12_Aa0.00
1701839.27TIMP2'protein_coding'15AELoss-14.071AB E4_Aa0
1711849.27TMEM30A'protein_coding'29AELoss-369.931AB E5_Da0
1721859.26VPS26A'protein_coding'312AELoss-50.022AB E3_Da0
1731869.26HBS1L'protein_coding'629AELoss-67.988EU ES AB E11_Aa20.00
1741879.26SRRM2'protein_coding'421AELoss-211.773EU AB E7_Aa0.00
1751889.25CREBL1'protein_coding'322AELoss-44.972AB E4_Aa0
1761899.24EIF4G1'protein_coding'938AELoss-55.551AB E17_Aa0
1771909.23AC093283.3'protein_coding'214AELoss-48.745EU AB E5_Aa50.00
1781919.23ACTR10'protein_coding'113AELoss-46.373AB E12_Aa0
1791929.23C3orf10'protein_coding'14AELoss-31.201AB E2_Da0
1801939.23MTCH1'protein_coding'521AELoss-61.111AB E8_Aa0
1811949.21LIMA1'protein_coding'212AELoss-21.539EU AB E6_Aa83.33
1821959.21USO1'protein_coding'124AELoss-186.561AB E10_Aa0
1831969.20PPP1CC'protein_coding'210AELoss-208.971AB E3_Da0
1841979.18HERPUD1'protein_coding'310AELoss-562.501AB E3_Ab0
1851989.17MAN1B1'protein_coding'319AELoss-40.872AB E5_Aa0
1861999.17NDUFA10'protein_coding'420AELoss-43.562AB E4_Aa0
1872009.15AC091742.5'protein_coding'113DELoss-569.960N/AAC091742.5N/A
1882019.15MYO1B'protein_coding'536AELoss-89.218EU ES AB E6_Aa83.33
1892029.13STXBP2'protein_coding'226AELoss-57.452AB E12_Aa0
1902039.12FXYD5'protein_coding'414AELoss-33.011AB E3_Aa0
1912049.12C6orf72'protein_coding'29AELoss-62.102AB E4_Aa0
1922059.11HYOU1'protein_coding'228AELoss-60.705EU ES AB E21_Aa0.00
1932069.11SLC25A39'protein_coding'213AELoss-32.332ES AB E12_Aa0
1942079.10AMZ2'protein_coding'613AELoss-26.842AB E3_Aa0
1952089.09CAST'protein_coding'1042AELoss-51.612ES AB E30_Ab0
1962099.09DLST'protein_coding'318AELoss-33.236EU ES AB E14_Da66.67
1972109.09RRAGC'protein_coding'17AELoss-65.821AB E3_Aa0
1982119.09SAPS1'protein_coding'124AELoss-37.114AB E22_Aa0
1992129.07RPS19'protein_coding'16AELoss-64.101AB E6_Aa0
2002139.06C11orf73'protein_coding'15AELoss-43.371AB E4_Aa0
2012149.06SERPINB4'protein_coding'28DELoss-534.630N/ASERPINB4N/A
2022159.04CTNNA1'protein_coding'222AELoss-205.541AB E13_Aa0
2032169.04TAX1BP1'protein_coding'322AELoss-110.574EU AB E12_Aa100.00
2042179.03DNM2'protein_coding'526AELoss-34.335EU ES AB E14_Aa33.33
2052189.03EIF3EIP'protein_coding'316AELoss-45.291AB E7_Da0
2062209.02FIP1L1'protein_coding'318AELoss-59.109EU ES AB IR E7_Aa50.00
2072219.01ATXN10'protein_coding'425AELoss-59.003AB E11_Da0
2082229.00SUPT4H1'protein_coding'15AELoss-61.641AB E3_Da0
2092238.99PIGR'protein_coding'111DELoss-507.490N/APIGRN/A
2102248.97MDH2'protein_coding'19AELoss-29.561AB E4_Aa0
2112258.97COPE'protein_coding'310AELoss-51.181AB E3_Aa0
2122268.96AC091742.5'protein_coding'120DELoss-499.700N/AAC091742.5N/A
2132278.94TMBIM1'protein_coding'112AELoss-30.851AB E9_Aa0
2142288.91CD82'protein_coding'210AELoss-30.581AB E7_Da0
2152298.89NOTCH2'protein_coding'236AELoss-58.103EU AB E33_Aa0
2162308.89TFIP11'protein_coding'523AELoss-34.886ES AB E7_Da0
2172318.89SEPT9'protein_coding'315AELoss-27.242EU ES E1a_E3a100.00
2182328.89PARVA'protein_coding'113AELoss-56.801AB E11_Aa0
2192338.87EPRS'protein_coding'132AELoss-46.792EU AB E17_Aa0
2202348.87CYP24A1'protein_coding'314DELoss-467.170N/ACYP24A1N/A
2212358.87SF3B2'protein_coding'226AELoss-53.275EU AB E19_Aa50.00
2222368.87MYO1E'protein_coding'128AELoss-41.857AB CE E12_Aa0
2232378.84DNAJC1'protein_coding'315AELoss-26.371AB E10_Da0
2242388.84AC006511.5'protein_coding'18AELoss-40.882AB E3_Aa0
2252398.83PSMA4'protein_coding'19AELoss-184.181AB E5_Da0
2262408.83RELL1'protein_coding'17AELoss-43.2312EU AB CE I6_AR100
2272418.82VCP'protein_coding'117AELoss-161.503AB E4_Aa0
2282428.82CSNK2A2'protein_coding'112AELoss-28.041AB E8_Aa0
2292438.82NCKAP1'protein_coding'232AELoss-45.891AB E24_Aa0
2302448.81PSMC3'protein_coding'112AELoss-48.501AB E5_Aa0
2312458.81SSU72'protein_coding'410AELoss-41.464EU AB E2_Aa0
2322468.81C20orf4'protein_coding'38AELoss-45.411AB E3_Da0
2332478.80RFC1'protein_coding'226AELoss-64.627EU AB E17_Aa75.00
2342498.80SRP68'protein_coding'321AELoss-52.422AB E3_Aa0
2352508.80SERPINB8'protein_coding'412AELoss-46.522ES AB E3_Aa0
2362518.80THOC5'protein_coding'422AELoss-45.411AB E10_Aa0
2372528.79PRKAG2'protein_coding'217AELoss-29.368EU AB ER3a100.00
2382538.79PTPRG'protein_coding'439AELoss-18.855EU AB E30_Aa0.00
2392548.79FLII'protein_coding'232AELoss-29.115AB E16_Aa0
2402558.78TMEM8'protein_coding'215AELoss-37.872AB E11_Aa0
2412568.77ACAA1'protein_coding'314AELoss-36.432AB E11_Aa0
2422578.77NAP1L1'protein_coding'217AELoss-53.054EU AB E4_Aa0
2432588.77INPP4B'protein_coding'225AELoss-15.069EU ES AB CE E1_Da100.00
2442598.77EXOC7'protein_coding'730AELoss-30.3514EU ES AB E7a_E8b75.00
2452608.76MGAT4B'protein_coding'216AELoss-26.552ES AB E8_Aa0
2462618.76HNRNPC'protein_coding'413AELoss-211.254ES AB E8_Aa0
2472628.75MYO1D'protein_coding'223AELoss-46.583EU AB E6_Aa0
2482638.75DCBLD2'protein_coding'334AELoss-5.954EU ES AB E13_Aa0.00
2492648.75MRPL42'protein_coding'410AELoss-140.371AB E2_Ab0
2502658.75HDDC2'protein_coding'412AELoss-29.831AB E8_Aa0
2512668.74TXNDC4'protein_coding'112AELoss-168.742ES AB E10_Aa0