Summary page for comparison: 'Myo_Epi2_vs_StemLike' (A01030_vs_A01031) - Project: Breast


Download complete candidate list as tab delimited text file: Myo_Epi2_vs_StemLike.txt


Summary of Differential (DE) and Alternative Expression (AE) for all gene loci:

Total Candidate Genes: 5,916 (of 36,953 possible genes)

DE Genes: 3,338

AE Genes: 3,530

Alternative Exon Usage (EU) Genes: 1,915

Alernative Exon Skipping (ES) Genes: 1,282

Alternative Exon Boundary (AB) Genes: 1,055

Intron Retention (IR) Genes: 139

Cryptic Exon (CE) Genes: 250


Candidate Differential AND Alternative Expression Genes

The following table lists candidate genes ranked according to 'Score'. Only the top 250 genes appear in each list. For a complete list download the results file provided above. To appear in this list, a 'candidate gene' must be differentially expressed at the gene level (DE) or contain at least one alternatively expressed (AE) feature. The 'Score' is based on the fold change as well as other factors for AE events (multiple features supporting the same event, reciprocity, etc.). The 'Event Type' indicates whether the gene was differentially expressed ('DE') or alternatively expressed 'AE'. 'Direction' refers to the direction (+ve/-ve) of the fold change. 'Gain' (+ve) indicates higher expression in library A than library B and vice versa. 'FC' stands for fold change. '# AE Events' is the number of significant alternative expression events observed for each gene. 'AE Codes' refers to various alternative expression subtypes (listed above). The 'Top Feature' is the most significant AE event observed for an AE gene. 'Adjacency' refers to the number of consecutive AE features (potentially supporting the same isoform). 'Adjacency %' refers to the percent of all AE events for a gene that were adjacent to each other.


RankOverall
Rank
ScoreNameGene
Type
Trans.
Count
Exon
Count
Event
Type
DirectionFC# AE
Events
AE CodesTop FeatureAdjacency
%
119.71ZNF294'protein_coding'333AEGain85.731AB E16_Da0
228.66TNRC6B'protein_coding'432AEGain43.751AB E22_Da0
338.37MAN2B2'protein_coding'119AEGain15.787EU AB E15_Da60.00
448.23SLC41A3'protein_coding'517AEGain125.603ES AB E9_Da0
558.22MAN1B1'protein_coding'319AEGain33.326EU AB E9_Da25.00
668.01LY75'protein_coding'443AEGain13.1966EU AB CE ER20a82.26
777.93COL17A1'protein_coding'358DEGain243.588EU ES COL17A128.57
887.82APOL1'protein_coding'39AEGain6.3530EU ES AB IR CE E6_Da88.89
997.54RNASE7'protein_coding'12DEGain186.440N/ARNASE7N/A
10107.49AHSA2'protein_coding'723AEGain23.794AB IR E10_Aa0
11117.25LCP1'protein_coding'221DEGain152.500N/ALCP1N/A
12127.13TNXB'protein_coding'770AEGain3.5318EU ES AB E47_Db43.75
13137.08PTPRE'protein_coding'222AELoss-13.7312EU ES AB CE I1_SR883.33
14147.07SLC12A8'protein_coding'320AEGain7.387EU ES ER5a0.00
15157.06OGN'protein_coding'210DELoss-133.400N/AOGNN/A
16166.99BAZ1B'protein_coding'221AEGain16.342ES AB E11_Da0
17176.89SH3RF2'protein_coding'110DEGain118.490N/ASH3RF2N/A
18186.79DCN'protein_coding'610DELoss-110.610N/ADCNN/A
19196.77SFRP4'protein_coding'16DELoss-109.241EU SFRP40
20206.72DLC1'protein_coding'320AELoss-61.0310EU ES E5a_E8a88.89
21216.65INCENP'protein_coding'219AEGain14.602EU AB E4_Da0
22226.63MFSD2'protein_coding'215AELoss-15.501ES E5a_E12a0
23236.57FGF1'protein_coding'1018AELoss-13.565EU ES E1b_E5a25.00
24246.57GREM1'protein_coding'24DELoss-94.850N/AGREM1N/A
25256.56TEP1'protein_coding'257AELoss-11.3610EU ES AB E25_Da37.50
26266.53GPR107'protein_coding'324AEGain28.384EU ES AB ER16a50.00
27276.52LUM'protein_coding'13DELoss-91.460N/ALUMN/A
28286.49TMEM40'protein_coding'214DEGain89.976ES TMEM4060.00
29296.48KRT14'protein_coding'18DEGain88.970N/AKRT14N/A
30306.45NRG1'protein_coding'1021DEGain87.560N/ANRG1N/A
31316.36DPT'protein_coding'14DELoss-82.170N/ADPTN/A
32326.35CFD'protein_coding'15DELoss-81.850N/ACFDN/A
33336.32MID1'protein_coding'616AEGain8.382EU ES E1a_E5a100.00
34346.30HAS3'protein_coding'37DEGain78.630N/AHAS3N/A
35356.29CYP4F11'protein_coding'315DEGain78.448EU ES AB CYP4F1125.00
36366.28AMIGO2'protein_coding'12DEGain77.600N/AAMIGO2N/A
37376.22PDE4B'protein_coding'524AEGain6.5610EU ES AB ENST0000034151775.00
38386.21FNIP1'protein_coding'320AEGain7.473EU E6a_E7a100.00
39396.18PTPRT'protein_coding'739DEGain72.740N/APTPRTN/A
40406.18TNS4'protein_coding'417DEGain72.330N/ATNS4N/A
41416.17MTMR9'protein_coding'110AEGain30.773EU AB CE E7_Da0
42426.17MFAP4'protein_coding'28DELoss-71.820N/AMFAP4N/A
43436.16NFASC'protein_coding'1548DEGain71.640N/ANFASCN/A
44446.16AKR1C1'protein_coding'211DELoss-71.571ES AKR1C10
45456.15CALD1'protein_coding'417AELoss-9.341EU E4a_E5a0
46466.14C5orf25'protein_coding'416AEGain46.582AB E4_Aa0
47476.08ACTG2'protein_coding'415DEGain67.531ES ACTG20
48486.05C14orf106'protein_coding'117AEGain9.812EU AB E11_Aa0
49496.03AKAP2'protein_coding'723AEGain11.773EU CE I12_AR35100.00
50506.02DST'protein_coding'9123DEGain28.09172EU ES AB IR DST82.50
51515.95SFRP2'protein_coding'13DELoss-61.930N/ASFRP2N/A
52525.89APOD'protein_coding'15DELoss-59.190N/AAPODN/A
53535.88PKIG'protein_coding'814AEGain3.297EU ES AB CE E1a_E4a25.00
54545.88SERPINA1'protein_coding'513AELoss-14.963CE I2_SR30
55555.87RAB28'protein_coding'413AEGain11.641AB E9_Aa0
56565.86C3orf62'protein_coding'13AELoss-13.153EU AB CE E1_Da0
57575.81PIGS'protein_coding'323AELoss-9.164EU ES AB E6b_E8a0.00
58585.77PTGDS'protein_coding'310DELoss-54.470N/APTGDSN/A
59595.75SERPINF1'protein_coding'18DELoss-53.981EU SERPINF10
60605.75C1S'protein_coding'634AEGain2.582AB CE E13_Da0
61615.75WISP2'protein_coding'411DELoss-53.890N/AWISP2N/A
62625.75DBNL'protein_coding'216AEGain33.161AB E7_Da0
63635.73FBLN1'protein_coding'627DELoss-53.080N/AFBLN1N/A
64645.72KIAA1191'protein_coding'39AELoss-9.581ES ENST000003937280
65655.72PSG4'protein_coding'28DEGain52.770N/APSG4N/A
66665.72SLC27A6'protein_coding'212DEGain52.750N/ASLC27A6N/A
67675.72KCNMB1'protein_coding'14DEGain52.650N/AKCNMB1N/A
68685.71TENC1'protein_coding'432AEGain7.055EU ES AB E16_Da33.33
69695.71FHOD3'protein_coding'225DEGain52.170N/AFHOD3N/A
70705.70WDR54'protein_coding'313AELoss-7.319EU AB IR E1b_E1e0.00
71715.70PDE1C'protein_coding'833DEGain52.000N/APDE1CN/A
72725.68ALDH1A1'protein_coding'216DELoss-51.370N/AALDH1A1N/A
73735.67RASSF6'protein_coding'413DEGain50.970N/ARASSF6N/A
74745.65TP63'protein_coding'717DEGain50.320N/ATP63N/A
75755.63AC009171.3'protein_coding'15AELoss-11.3013EU AB IR CE E2_Aa0
76765.60PIK3IP1'protein_coding'28AEGain11.003EU AB CE E6_Aa0
77775.58CXCL12'protein_coding'610DELoss-22.102EU ES CXCL12100.00
78785.58TTC7A'protein_coding'528AEGain11.403ES AB E10_Da0
79795.57RGS12'protein_coding'525AEGain8.622CE I5_AR110
80805.56TMEM14A'protein_coding'15AEGain8.961EU E1a_E2a0
81815.56TPM1'protein_coding'921AELoss-5.008EU ES E4a_E5a28.57
82825.53STC2'protein_coding'14DEGain46.210N/ASTC2N/A
83835.53NOTCH4'protein_coding'130DEGain46.190N/ANOTCH4N/A
84845.49OMD'protein_coding'13DELoss-44.980N/AOMDN/A
85855.49COL4A5'protein_coding'353DEGain44.870N/ACOL4A5N/A
86865.49ASPN'protein_coding'311DELoss-44.830N/AASPNN/A
87875.48PKP1'protein_coding'317DEGain44.760N/APKP1N/A
88885.48ARHGEF7'protein_coding'833AELoss-20.636EU ES ER1b100.00
89895.48SOD3'protein_coding'12DELoss-44.590N/ASOD3N/A
90905.48NBEA'protein_coding'566AEGain4.8432EU CE ER12a42.86
91915.47AC127496.5'protein_coding'134AELoss-8.8216EU CE I9_AR666.67
92925.47CST6'protein_coding'13DEGain44.420N/ACST6N/A
93935.47TRIM28'protein_coding'217AELoss-9.591ES E1a_E3a0
94945.44PFDN1'protein_coding'14AELoss-8.283AB CE I2_AR50
95955.44C11orf53'protein_coding'25DELoss-43.420N/AC11orf53N/A
96965.44FGFR1'protein_coding'1137AEGain10.919EU AB IR E11a_E12a66.67
97975.43LAMA3'protein_coding'377DEGain42.990N/ALAMA3N/A
98985.42PENK'protein_coding'12DELoss-42.800N/APENKN/A
99995.41SPON1'protein_coding'117AEGain5.1537EU AB IR E11_Aa63.64
1001005.40EGLN1'protein_coding'15AEGain3.051AB E4_Aa0
1011015.39TRUB2'protein_coding'18AELoss-7.531AB E7_Aa0
1021025.39HIST1H3H'protein_coding'23AEGain11.051AB E2_Aa0
1031035.39INTS4'protein_coding'123AELoss-8.501AB E18_Aa0
1041045.37SERPINB5'protein_coding'17DEGain41.450N/ASERPINB5N/A
1051055.34ITPR1'protein_coding'464AELoss-4.1426EU AB IR CE I42_AR153.85
1061065.34PDLIM5'protein_coding'522AELoss-5.961ES E5a_E7b0
1071075.33BACE1'protein_coding'318AEGain5.776EU AB E7_Aa100.00
1081085.33PIP5K2B'protein_coding'211AEGain22.012EU E6a_E7a100.00
1091095.33RAVER1'protein_coding'216AELoss-11.681ES E1a_E9a0
1101105.32S100A3'protein_coding'25AELoss-5.572EU ES ER1a100.00
1111115.32TRIM13'protein_coding'49AEGain9.351AB E1_Dc0
1121125.32LGTN'protein_coding'316AEGain9.392EU AB E11_Da0
1131135.31RIPK4'protein_coding'314DEGain19.017EU AB RIPK4100.00
1141145.30DPM3'protein_coding'35AELoss-12.114EU AB E2_Ab100.00
1151155.30MYH11'protein_coding'443AELoss-7.464EU ER42a66.67
1161165.29CDK10'protein_coding'417AELoss-7.862AB E6_Da0
1171175.28PI16'protein_coding'17DELoss-38.780N/API16N/A
1181185.28GRP'protein_coding'13DEGain38.770N/AGRPN/A
1191195.27BGN'protein_coding'211DELoss-38.540N/ABGNN/A
1201205.26AC026412.4'protein_coding'14AEGain8.582AB E3_Da0
1211215.25ITGA6'protein_coding'631DEGain38.188EU ES ITGA642.86
1221225.25TFIP11'protein_coding'523AEGain8.8119EU AB IR CE I12_AR20
1231235.25ENPP1'protein_coding'225AEGain6.584EU E10a_E11a66.67
1241245.25C1orf27'protein_coding'214AEGain8.912ES E8a_E12a0.00
1251255.25MSC'protein_coding'12DELoss-37.950N/AMSCN/A
1261265.25C14orf94'protein_coding'614AEGain7.054EU ES E6a_E8a33.33
1271275.24RNF43'protein_coding'212DEGain37.870N/ARNF43N/A
1281285.23AGAP3'protein_coding'423AEGain5.763EU ES E2a_E3a0.00
1291295.23PRPF40B'protein_coding'431AELoss-5.9819EU AB IR CE E16_Aa66.67
1301305.23CYP26A1'protein_coding'39DEGain37.410N/ACYP26A1N/A
1311315.22CLIC2'protein_coding'27DELoss-37.231ES CLIC20
1321325.22C13orf33'protein_coding'15DELoss-37.140N/AC13orf33N/A
1331335.21ODZ2'protein_coding'235DEGain36.980N/AODZ2N/A
1341345.20PSG5'protein_coding'718DEGain36.790N/APSG5N/A
1351355.19DKK1'protein_coding'14DEGain36.490N/ADKK1N/A
1361365.19FOXJ3'protein_coding'519AELoss-6.901ES E6a_E8a0
1371375.17CHRDL1'protein_coding'419DELoss-36.121AB CHRDL10
1381385.16CDH3'protein_coding'116DEGain35.730N/ACDH3N/A
1391395.16GPR133'protein_coding'327DELoss-35.680N/AGPR133N/A
1401405.16TNPO2'protein_coding'125AELoss-7.681ES E9a_E13a0
1411415.15LSP1'protein_coding'717DELoss-35.580N/ALSP1N/A
1421425.15HLA-G'protein_coding'513AEGain30.7313EU AB IR E5_Da50.00
1431435.14ADH1B'protein_coding'211DELoss-35.180N/AADH1BN/A
1441445.13SERPINB2'protein_coding'211DELoss-35.110N/ASERPINB2N/A
1451455.13AL353732.14'protein_coding'14DEGain35.070N/AAL353732.14N/A
1461465.11PDCD11'protein_coding'136AELoss-4.611I13_SR20
1471475.11INPP5B'protein_coding'631AEGain8.483EU AB E2_Ab0.00
1481485.11DPH1'protein_coding'113AELoss-7.9815AB IR CE E2_Aa0
1491495.10ABI3BP'protein_coding'567DELoss-34.3833EU ES ABI3BP53.12
1501505.10IL33'protein_coding'17DELoss-34.300N/AIL33N/A
1511515.10C1orf86'protein_coding'817AELoss-6.593EU AB ER3a0.00
1521525.10NDST1'protein_coding'114AELoss-6.941ES E5a_E7a0
1531535.09SORBS1'protein_coding'1643AELoss-5.977EU ES E4a_E5a40.00
1541545.09CASP1'protein_coding'515AELoss-5.672ES AB E2_Aa0
1551555.07HSPB6'protein_coding'13DELoss-33.550N/AHSPB6N/A
1561565.07SDCBP2'protein_coding'513AEGain6.081AB E3_Aa0
1571575.06RHBDD3'protein_coding'29AELoss-6.821ES E3a_E6a0
1581585.06CTHRC1'protein_coding'27DELoss-33.360N/ACTHRC1N/A
1591595.06C12orf50'protein_coding'216DELoss-33.320N/AC12orf50N/A
1601605.06AC110079.3'protein_coding'211AELoss-10.212ES AB E9_Da0
1611615.05C3'protein_coding'141DELoss-33.211EU C30
1621625.05CDH13'protein_coding'114DEGain33.090N/ACDH13N/A
1631635.04HNRNPA1L2'protein_coding'38AELoss-7.094EU AB E7_Aa100.00
1641645.02EGFL9'protein_coding'412DEGain32.480N/AEGFL9N/A
1651655.01CLEC3B'protein_coding'13DELoss-32.290N/ACLEC3BN/A
1661665.01HS2ST1'protein_coding'415AELoss-7.617EU ES ER10a50.00
1671675.01LTB'protein_coding'24DEGain32.180N/ALTBN/A
1681685.00ECM2'protein_coding'314DELoss-31.920N/AECM2N/A
1691694.99DES'protein_coding'19DELoss-31.850N/ADESN/A
1701704.99FALZ'protein_coding'538AEGain7.895EU ES E4a_E6a50.00
1711714.99C2orf54'protein_coding'37DEGain31.680N/AC2orf54N/A
1721724.98SLC7A5'protein_coding'110AELoss-6.291ES E2a_E5a0
1731734.98MYH10'protein_coding'446AEGain7.684EU AB E43_Aa0.00
1741744.97FBLN2'protein_coding'320DELoss-31.400N/AFBLN2N/A
1751754.97PSG1'protein_coding'512DEGain31.400N/APSG1N/A
1761764.97ITGA3'protein_coding'226DEGain31.371ES ITGA30
1771774.96TNC'protein_coding'528DEGain15.6818EU ES TNC94.12
1781784.96CTNS'protein_coding'317AELoss-6.852EU ES E2a_E7a0.00
1791794.96RIN2'protein_coding'112AEGain12.775EU ES E5a_E7a100.00
1801804.95BDKRB1'protein_coding'13DELoss-30.960N/ABDKRB1N/A
1811814.95MRPL39'protein_coding'211AELoss-9.0335AB IR I90
1821824.94FKBP15'protein_coding'128AELoss-9.063EU AB E20_Da0
1831834.94BAIAP2L1'protein_coding'114AELoss-2.103ES AB CE I3_AR100
1841844.93C17orf101'protein_coding'312AELoss-17.202AB E8_Da0
1851854.93CLDN14'protein_coding'57DELoss-30.430N/ACLDN14N/A
1861864.93LRRC57'protein_coding'28AELoss-7.874EU AB E1_Da0.00
1871874.91WNT5B'protein_coding'27DEGain30.120N/AWNT5BN/A
1881884.91DOCK7'protein_coding'658AELoss-8.402EU ES E50a_E52a0.00
1891894.91PRKAR2A'protein_coding'211AEGain8.912ES AB E9a_E11a0
1901904.90MYOM2'protein_coding'137DELoss-29.890N/AMYOM2N/A
1911914.90ABCA8'protein_coding'243DELoss-29.770N/AABCA8N/A
1921924.90SNCA'protein_coding'511DEGain29.770N/ASNCAN/A
1931934.90FAM35A'protein_coding'311AEGain8.631AB E2_Da0
1941944.89ADRB2'protein_coding'11DEGain29.700N/AADRB2N/A
1951954.89LAMC2'protein_coding'224DEGain29.591ES LAMC20
1961964.88ZFPM2'protein_coding'314DELoss-29.460N/AZFPM2N/A
1971974.88SDHALP2'protein_coding'114AEGain9.213ES AB E5_Aa0
1981984.87OLFML3'protein_coding'38DELoss-29.240N/AOLFML3N/A
1991994.87AL162734.15'pseudogene'14AELoss-6.581AB E1_Da0
2002004.87C6orf89'protein_coding'415AEGain8.571AB E3_Aa0
2012014.86CPZ'protein_coding'315DELoss-29.090N/ACPZN/A
2022024.86FAM180A'protein_coding'14DELoss-29.051AB FAM180A0
2032034.86KCNK17'protein_coding'27DEGain29.040N/AKCNK17N/A
2042044.86PID1'protein_coding'511DELoss-29.010N/APID1N/A
2052054.86WDR61'protein_coding'111AELoss-20.4650AB IR I4_SR10
2062064.86ORMDL2'protein_coding'14AELoss-8.619AB IR CE E3_Da0
2072074.85RTN2'protein_coding'212AEGain9.2314EU AB IR E3a_E4a0.00
2082084.84ACAD8'protein_coding'212AEGain6.061AB E9_Da0
2092094.84GTPBP6'protein_coding'17AELoss-7.501ES E3a_E5a0
2102104.84PLCH2'protein_coding'633DEGain28.590N/APLCH2N/A
2112114.83C2orf3'protein_coding'220AEGain6.004ES AB E15_Da0
2122124.83MRGPRX3'protein_coding'13DEGain28.380N/AMRGPRX3N/A
2132134.82ABCC3'protein_coding'131DEGain28.330N/AABCC3N/A
2142144.82PCOLCE'protein_coding'19DELoss-28.280N/APCOLCEN/A
2152154.82GDAP2'protein_coding'215AELoss-6.581AB E1_Da0
2162164.81FGF7'protein_coding'14DELoss-28.100N/AFGF7N/A
2172174.81PCM1'protein_coding'445AEGain8.453EU ES E30a_E32a0.00
2182184.81UQCC'protein_coding'1425AEGain7.061AB E1_Da0
2192194.80KIF1B'protein_coding'759AEGain10.8321EU ES AB E31a_E33a63.16
2202204.80AL645939.6'protein_coding'24AEGain9.004AB CE I3_AR20
2212214.80IL6'protein_coding'616DELoss-27.780N/AIL6N/A
2222224.80STATIP1'protein_coding'322AELoss-7.953ES E15a_E18a0.00
2232234.79PTGES'protein_coding'13DELoss-27.670N/APTGESN/A
2242244.79AP1G2'protein_coding'223AELoss-6.736EU AB E11_Da0.00
2252254.78KIAA1217'protein_coding'930AEGain4.8710EU ES E15a_E17a66.67
2262264.78CSF3'protein_coding'411DELoss-27.400N/ACSF3N/A
2272274.78CTSK'protein_coding'210DELoss-27.390N/ACTSKN/A
2282284.77TTC37'protein_coding'143AEGain14.422EU AB E31_Da0
2292294.77GRLF1'protein_coding'29AELoss-5.901ES E2a_E4a0
2302304.77PEF1'protein_coding'15AEGain24.301CE I2_AR30
2312314.77MMP2'protein_coding'113DELoss-27.190N/AMMP2N/A
2322324.76AYTL1'protein_coding'114AEGain18.844EU IR E1a_E2a0
2332334.76GNB4'protein_coding'110AELoss-6.345EU AB E4_Da0.00
2342344.76EPB41L2'protein_coding'727AELoss-12.547EU E2a_E3b83.33
2352354.75SCNN1G'protein_coding'113DEGain26.960N/ASCNN1GN/A
2362364.75DNAJC7'protein_coding'114AELoss-6.663ES AB E8a_E10a0
2372374.74ARMC4'protein_coding'221DEGain26.740N/AARMC4N/A
2382384.73PPP1CB'protein_coding'412AEGain14.251ES E5a_E8a0
2392394.73C3orf26'protein_coding'110AELoss-7.004CE I1_AR50
2402404.71EHD3'protein_coding'16DEGain26.200N/AEHD3N/A
2412414.71HTRA1'protein_coding'19DELoss-26.180N/AHTRA1N/A
2422424.71RASSF10'protein_coding'14DEGain26.150N/ARASSF10N/A
2432434.71GPR56'protein_coding'418DEGain26.110N/AGPR56N/A
2442444.70CREB3L4'protein_coding'617AEGain6.053EU AB E7_Aa0.00
2452454.70JPH2'protein_coding'27DEGain26.030N/AJPH2N/A
2462464.70ABLIM1'protein_coding'1540AEGain12.9814EU ES AB E7b_E8a90.91
2472474.70CARD10'protein_coding'325DEGain26.013EU ES CARD100.00
2482484.69WDR20'protein_coding'58AEGain6.2812AB CE E4_Db0
2492494.69RBM28'protein_coding'119AEGain14.191AB E11_Da0
2502504.69AMMECR1L'protein_coding'210AELoss-16.955EU ES AB E2_Da0.00
2512514.69LRRC15'protein_coding'12DELoss-25.750N/ALRRC15N/A


Candidate Alternative Expression Genes

The following table lists candidate genes ranked according to 'Score'. Only the top 250 genes appear in each list. For a complete list download the results file provided above. To appear in this list, a 'candidate gene' must be differentially expressed at the gene level (DE) or contain at least one alternatively expressed (AE) feature. The 'Score' is based on the fold change as well as other factors for AE events (multiple features supporting the same event, reciprocity, etc.). The 'Event Type' indicates whether the gene was differentially expressed ('DE') or alternatively expressed 'AE'. 'Direction' refers to the direction (+ve/-ve) of the fold change. 'Gain' (+ve) indicates higher expression in library A than library B and vice versa. 'FC' stands for fold change. '# AE Events' is the number of significant alternative expression events observed for each gene. 'AE Codes' refers to various alternative expression subtypes (listed above). The 'Top Feature' is the most significant AE event observed for an AE gene. 'Adjacency' refers to the number of consecutive AE features (potentially supporting the same isoform). 'Adjacency %' refers to the percent of all AE events for a gene that were adjacent to each other.


RankOverall
Rank
ScoreNameGene
Type
Trans.
Count
Exon
Count
Event
Type
DirectionFC# AE
Events
AE CodesTop FeatureAdjacency
%
119.71ZNF294'protein_coding'333AEGain85.731AB E16_Da0
228.66TNRC6B'protein_coding'432AEGain43.751AB E22_Da0
338.37MAN2B2'protein_coding'119AEGain15.787EU AB E15_Da60.00
448.23SLC41A3'protein_coding'517AEGain125.603ES AB E9_Da0
558.22MAN1B1'protein_coding'319AEGain33.326EU AB E9_Da25.00
668.01LY75'protein_coding'443AEGain13.1966EU AB CE ER20a82.26
777.93COL17A1'protein_coding'358DEGain243.588EU ES COL17A128.57
887.82APOL1'protein_coding'39AEGain6.3530EU ES AB IR CE E6_Da88.89
9107.49AHSA2'protein_coding'723AEGain23.794AB IR E10_Aa0
10127.13TNXB'protein_coding'770AEGain3.5318EU ES AB E47_Db43.75
11137.08PTPRE'protein_coding'222AELoss-13.7312EU ES AB CE I1_SR883.33
12147.07SLC12A8'protein_coding'320AEGain7.387EU ES ER5a0.00
13166.99BAZ1B'protein_coding'221AEGain16.342ES AB E11_Da0
14196.77SFRP4'protein_coding'16DELoss-109.241EU SFRP40
15206.72DLC1'protein_coding'320AELoss-61.0310EU ES E5a_E8a88.89
16216.65INCENP'protein_coding'219AEGain14.602EU AB E4_Da0
17226.63MFSD2'protein_coding'215AELoss-15.501ES E5a_E12a0
18236.57FGF1'protein_coding'1018AELoss-13.565EU ES E1b_E5a25.00
19256.56TEP1'protein_coding'257AELoss-11.3610EU ES AB E25_Da37.50
20266.53GPR107'protein_coding'324AEGain28.384EU ES AB ER16a50.00
21286.49TMEM40'protein_coding'214DEGain89.976ES TMEM4060.00
22336.32MID1'protein_coding'616AEGain8.382EU ES E1a_E5a100.00
23356.29CYP4F11'protein_coding'315DEGain78.448EU ES AB CYP4F1125.00
24376.22PDE4B'protein_coding'524AEGain6.5610EU ES AB ENST0000034151775.00
25386.21FNIP1'protein_coding'320AEGain7.473EU E6a_E7a100.00
26416.17MTMR9'protein_coding'110AEGain30.773EU AB CE E7_Da0
27446.16AKR1C1'protein_coding'211DELoss-71.571ES AKR1C10
28456.15CALD1'protein_coding'417AELoss-9.341EU E4a_E5a0
29466.14C5orf25'protein_coding'416AEGain46.582AB E4_Aa0
30476.08ACTG2'protein_coding'415DEGain67.531ES ACTG20
31486.05C14orf106'protein_coding'117AEGain9.812EU AB E11_Aa0
32496.03AKAP2'protein_coding'723AEGain11.773EU CE I12_AR35100.00
33506.02DST'protein_coding'9123DEGain28.09172EU ES AB IR DST82.50
34535.88PKIG'protein_coding'814AEGain3.297EU ES AB CE E1a_E4a25.00
35545.88SERPINA1'protein_coding'513AELoss-14.963CE I2_SR30
36555.87RAB28'protein_coding'413AEGain11.641AB E9_Aa0
37565.86C3orf62'protein_coding'13AELoss-13.153EU AB CE E1_Da0
38575.81PIGS'protein_coding'323AELoss-9.164EU ES AB E6b_E8a0.00
39595.75SERPINF1'protein_coding'18DELoss-53.981EU SERPINF10
40605.75C1S'protein_coding'634AEGain2.582AB CE E13_Da0
41625.75DBNL'protein_coding'216AEGain33.161AB E7_Da0
42645.72KIAA1191'protein_coding'39AELoss-9.581ES ENST000003937280
43685.71TENC1'protein_coding'432AEGain7.055EU ES AB E16_Da33.33
44705.70WDR54'protein_coding'313AELoss-7.319EU AB IR E1b_E1e0.00
45755.63AC009171.3'protein_coding'15AELoss-11.3013EU AB IR CE E2_Aa0
46765.60PIK3IP1'protein_coding'28AEGain11.003EU AB CE E6_Aa0
47775.58CXCL12'protein_coding'610DELoss-22.102EU ES CXCL12100.00
48785.58TTC7A'protein_coding'528AEGain11.403ES AB E10_Da0
49795.57RGS12'protein_coding'525AEGain8.622CE I5_AR110
50805.56TMEM14A'protein_coding'15AEGain8.961EU E1a_E2a0
51815.56TPM1'protein_coding'921AELoss-5.008EU ES E4a_E5a28.57
52885.48ARHGEF7'protein_coding'833AELoss-20.636EU ES ER1b100.00
53905.48NBEA'protein_coding'566AEGain4.8432EU CE ER12a42.86
54915.47AC127496.5'protein_coding'134AELoss-8.8216EU CE I9_AR666.67
55935.47TRIM28'protein_coding'217AELoss-9.591ES E1a_E3a0
56945.44PFDN1'protein_coding'14AELoss-8.283AB CE I2_AR50
57965.44FGFR1'protein_coding'1137AEGain10.919EU AB IR E11a_E12a66.67
58995.41SPON1'protein_coding'117AEGain5.1537EU AB IR E11_Aa63.64
591005.40EGLN1'protein_coding'15AEGain3.051AB E4_Aa0
601015.39TRUB2'protein_coding'18AELoss-7.531AB E7_Aa0
611025.39HIST1H3H'protein_coding'23AEGain11.051AB E2_Aa0
621035.39INTS4'protein_coding'123AELoss-8.501AB E18_Aa0
631055.34ITPR1'protein_coding'464AELoss-4.1426EU AB IR CE I42_AR153.85
641065.34PDLIM5'protein_coding'522AELoss-5.961ES E5a_E7b0
651075.33BACE1'protein_coding'318AEGain5.776EU AB E7_Aa100.00
661085.33PIP5K2B'protein_coding'211AEGain22.012EU E6a_E7a100.00
671095.33RAVER1'protein_coding'216AELoss-11.681ES E1a_E9a0
681105.32S100A3'protein_coding'25AELoss-5.572EU ES ER1a100.00
691115.32TRIM13'protein_coding'49AEGain9.351AB E1_Dc0
701125.32LGTN'protein_coding'316AEGain9.392EU AB E11_Da0
711135.31RIPK4'protein_coding'314DEGain19.017EU AB RIPK4100.00
721145.30DPM3'protein_coding'35AELoss-12.114EU AB E2_Ab100.00
731155.30MYH11'protein_coding'443AELoss-7.464EU ER42a66.67
741165.29CDK10'protein_coding'417AELoss-7.862AB E6_Da0
751205.26AC026412.4'protein_coding'14AEGain8.582AB E3_Da0
761215.25ITGA6'protein_coding'631DEGain38.188EU ES ITGA642.86
771225.25TFIP11'protein_coding'523AEGain8.8119EU AB IR CE I12_AR20
781235.25ENPP1'protein_coding'225AEGain6.584EU E10a_E11a66.67
791245.25C1orf27'protein_coding'214AEGain8.912ES E8a_E12a0.00
801265.25C14orf94'protein_coding'614AEGain7.054EU ES E6a_E8a33.33
811285.23AGAP3'protein_coding'423AEGain5.763EU ES E2a_E3a0.00
821295.23PRPF40B'protein_coding'431AELoss-5.9819EU AB IR CE E16_Aa66.67
831315.22CLIC2'protein_coding'27DELoss-37.231ES CLIC20
841365.19FOXJ3'protein_coding'519AELoss-6.901ES E6a_E8a0
851375.17CHRDL1'protein_coding'419DELoss-36.121AB CHRDL10
861405.16TNPO2'protein_coding'125AELoss-7.681ES E9a_E13a0
871425.15HLA-G'protein_coding'513AEGain30.7313EU AB IR E5_Da50.00
881465.11PDCD11'protein_coding'136AELoss-4.611I13_SR20
891475.11INPP5B'protein_coding'631AEGain8.483EU AB E2_Ab0.00
901485.11DPH1'protein_coding'113AELoss-7.9815AB IR CE E2_Aa0
911495.10ABI3BP'protein_coding'567DELoss-34.3833EU ES ABI3BP53.12
921515.10C1orf86'protein_coding'817AELoss-6.593EU AB ER3a0.00
931525.10NDST1'protein_coding'114AELoss-6.941ES E5a_E7a0
941535.09SORBS1'protein_coding'1643AELoss-5.977EU ES E4a_E5a40.00
951545.09CASP1'protein_coding'515AELoss-5.672ES AB E2_Aa0
961565.07SDCBP2'protein_coding'513AEGain6.081AB E3_Aa0
971575.06RHBDD3'protein_coding'29AELoss-6.821ES E3a_E6a0
981605.06AC110079.3'protein_coding'211AELoss-10.212ES AB E9_Da0
991615.05C3'protein_coding'141DELoss-33.211EU C30
1001635.04HNRNPA1L2'protein_coding'38AELoss-7.094EU AB E7_Aa100.00
1011665.01HS2ST1'protein_coding'415AELoss-7.617EU ES ER10a50.00
1021704.99FALZ'protein_coding'538AEGain7.895EU ES E4a_E6a50.00
1031724.98SLC7A5'protein_coding'110AELoss-6.291ES E2a_E5a0
1041734.98MYH10'protein_coding'446AEGain7.684EU AB E43_Aa0.00
1051764.97ITGA3'protein_coding'226DEGain31.371ES ITGA30
1061774.96TNC'protein_coding'528DEGain15.6818EU ES TNC94.12
1071784.96CTNS'protein_coding'317AELoss-6.852EU ES E2a_E7a0.00
1081794.96RIN2'protein_coding'112AEGain12.775EU ES E5a_E7a100.00
1091814.95MRPL39'protein_coding'211AELoss-9.0335AB IR I90
1101824.94FKBP15'protein_coding'128AELoss-9.063EU AB E20_Da0
1111834.94BAIAP2L1'protein_coding'114AELoss-2.103ES AB CE I3_AR100
1121844.93C17orf101'protein_coding'312AELoss-17.202AB E8_Da0
1131864.93LRRC57'protein_coding'28AELoss-7.874EU AB E1_Da0.00
1141884.91DOCK7'protein_coding'658AELoss-8.402EU ES E50a_E52a0.00
1151894.91PRKAR2A'protein_coding'211AEGain8.912ES AB E9a_E11a0
1161934.90FAM35A'protein_coding'311AEGain8.631AB E2_Da0
1171954.89LAMC2'protein_coding'224DEGain29.591ES LAMC20
1181974.88SDHALP2'protein_coding'114AEGain9.213ES AB E5_Aa0
1191994.87AL162734.15'pseudogene'14AELoss-6.581AB E1_Da0
1202004.87C6orf89'protein_coding'415AEGain8.571AB E3_Aa0
1212024.86FAM180A'protein_coding'14DELoss-29.051AB FAM180A0
1222054.86WDR61'protein_coding'111AELoss-20.4650AB IR I4_SR10
1232064.86ORMDL2'protein_coding'14AELoss-8.619AB IR CE E3_Da0
1242074.85RTN2'protein_coding'212AEGain9.2314EU AB IR E3a_E4a0.00
1252084.84ACAD8'protein_coding'212AEGain6.061AB E9_Da0
1262094.84GTPBP6'protein_coding'17AELoss-7.501ES E3a_E5a0
1272114.83C2orf3'protein_coding'220AEGain6.004ES AB E15_Da0
1282154.82GDAP2'protein_coding'215AELoss-6.581AB E1_Da0
1292174.81PCM1'protein_coding'445AEGain8.453EU ES E30a_E32a0.00
1302184.81UQCC'protein_coding'1425AEGain7.061AB E1_Da0
1312194.80KIF1B'protein_coding'759AEGain10.8321EU ES AB E31a_E33a63.16
1322204.80AL645939.6'protein_coding'24AEGain9.004AB CE I3_AR20
1332224.80STATIP1'protein_coding'322AELoss-7.953ES E15a_E18a0.00
1342244.79AP1G2'protein_coding'223AELoss-6.736EU AB E11_Da0.00
1352254.78KIAA1217'protein_coding'930AEGain4.8710EU ES E15a_E17a66.67
1362284.77TTC37'protein_coding'143AEGain14.422EU AB E31_Da0
1372294.77GRLF1'protein_coding'29AELoss-5.901ES E2a_E4a0
1382304.77PEF1'protein_coding'15AEGain24.301CE I2_AR30
1392324.76AYTL1'protein_coding'114AEGain18.844EU IR E1a_E2a0
1402334.76GNB4'protein_coding'110AELoss-6.345EU AB E4_Da0.00
1412344.76EPB41L2'protein_coding'727AELoss-12.547EU E2a_E3b83.33
1422364.75DNAJC7'protein_coding'114AELoss-6.663ES AB E8a_E10a0
1432384.73PPP1CB'protein_coding'412AEGain14.251ES E5a_E8a0
1442394.73C3orf26'protein_coding'110AELoss-7.004CE I1_AR50
1452444.70CREB3L4'protein_coding'617AEGain6.053EU AB E7_Aa0.00
1462464.70ABLIM1'protein_coding'1540AEGain12.9814EU ES AB E7b_E8a90.91
1472474.70CARD10'protein_coding'325DEGain26.013EU ES CARD100.00
1482484.69WDR20'protein_coding'58AEGain6.2812AB CE E4_Db0
1492494.69RBM28'protein_coding'119AEGain14.191AB E11_Da0
1502504.69AMMECR1L'protein_coding'210AELoss-16.955EU ES AB E2_Da0.00
1512524.68DDB2'protein_coding'513AEGain5.314EU AB E9_Da100.00
1522544.67SMARCC2'protein_coding'331AELoss-5.112EU ES ENST000003474710.00
1532554.66USP28'protein_coding'225AEGain6.671ES E7a_E9a0
1542584.65SAA4'protein_coding'14AEGain6.181AB E2_Da0
1552594.65PLEKHA4'protein_coding'220AELoss-13.904ES E8a_E13a33.33
1562604.65ZDHHC13'protein_coding'217AELoss-6.761ES E1a_E3a0
1572614.65USMG5'protein_coding'513AELoss-7.941EU E2a_E3a0
1582624.64ZFYVE26'protein_coding'245AELoss-6.691ES E9a_E11a0
1592644.64SUV39H2'protein_coding'512AELoss-7.942EU E1a_E2a0.00
1602674.63C21orf2'protein_coding'412AEGain7.394EU ES AB E5_Aa50.00
1612684.62DNMT1'protein_coding'241AELoss-7.002ES AB E3a_E7a0
1622694.62TFPI'protein_coding'515DELoss-24.513EU ES AB TFPI0.00
1632704.61PSMC5'protein_coding'214AELoss-6.211ES E4a_E7a0
1642714.61MKNK1'protein_coding'719AELoss-8.391EU E3a_E4a0
1652724.61ARHGAP8'protein_coding'1740AELoss-5.8522EU AB E9b_E10a55.56
1662734.60DHX58'protein_coding'114AEGain5.567EU ER12a66.67
1672744.60DOPEY1'protein_coding'345AELoss-7.0944EU ES AB IR CE I27_SR148.39
1682764.60AC116366.4'protein_coding'49AELoss-16.277EU ES E2a_E7a100.00
1692774.60NFATC3'protein_coding'413AEGain15.452AB CE E12_Aa0
1702784.60OXNAD1'protein_coding'19AELoss-5.484EU AB I4_SR30
1712794.59LPIN1'protein_coding'529AELoss-6.371ES E4a_E6a0
1722824.58EDNRB'protein_coding'29DELoss-12.652ES EDNRB100.00
1732854.56MYH3'protein_coding'140AELoss-5.5029EU AB IR I2733.33
1742864.56KIAA0415'protein_coding'218AELoss-7.771ES E14a_E17a0
1752874.55SUMF1'protein_coding'313AEGain5.535EU CE I10_AR240.00
1762894.54SLC26A10'protein_coding'738AEGain5.6617EU AB IR I28_AR10.00
1772904.54FN1'protein_coding'1050DELoss-23.205EU ES FN150.00
1782914.53SACM1L'protein_coding'120AEGain7.301AB E17_Da0
1792924.53GPT2'protein_coding'112DEGain12.347EU GPT266.67
1802934.53LTBP4'protein_coding'541DELoss-12.3333EU ES AB LTBP463.33
1812954.52CUL7'protein_coding'126AEGain19.545EU ES AB E6_Aa0.00
1822964.52DGKZ'protein_coding'435AELoss-4.562AB E28_Aa0
1832974.52NEK1'protein_coding'336AEGain8.323EU AB E2_Da100.00
1842984.52ZMYM6'protein_coding'525AEGain4.834EU AB E1_Ab100.00
1853034.50CSPG4'protein_coding'110AELoss-7.102ES AB E2a_E4a0
1863054.50SLC29A1'protein_coding'924AELoss-17.5610EU ES AB IR E1a_E4c80.00
1873064.50ZNF323'protein_coding'311AEGain3.3710ES AB IR I4_SR1100.00
1883074.50MTR'protein_coding'133AEGain6.982AB CE E31_Aa0
1893094.49LRRC42'protein_coding'315AEGain6.231ES E1b_E3a0
1903104.49PDCL3'protein_coding'28AEGain13.641CE I6_AR10
1913114.48PLCD1'protein_coding'216AELoss-7.163EU AB E8_Aa0.00
1923124.48S100A4'protein_coding'49DELoss-22.282ES AB S100A40
1933134.48KIAA0907'protein_coding'318AELoss-6.661ES E4a_E8a0
1943154.47CPA4'protein_coding'111DEGain22.183EU ES CPA450.00
1953164.47RPGR'protein_coding'622AEGain5.904EU AB E4_Aa0
1963174.46FMNL1'protein_coding'332AELoss-45.8731EU ES AB ER5a92.59
1973214.45RAB6B'protein_coding'18AEGain11.4012EU E3a_E4a90.91
1983244.44SCRN2'protein_coding'210AEGain6.031AB E2_Aa0
1993284.43C11orf60'protein_coding'213AELoss-5.691AB E7_Aa0
2003304.43HDAC9'protein_coding'634AELoss-14.258EU ES AB CE E27_Aa50.00
2013314.43DLG1'protein_coding'833AELoss-5.873ES E13a_E17a0.00
2023324.42RFX3'protein_coding'825AELoss-6.853EU ES CE E6a_E9a0.00
2033334.42MAP2'protein_coding'623DEGain11.597EU MAP266.67
2043354.42CDCP1'protein_coding'19AELoss-3.331CE I4_AR10
2053364.42STARD5'protein_coding'26AEGain6.101AB E2_Da0
2063374.42SNX13'protein_coding'534AEGain7.404EU AB E27_Da0.00
2073394.41COL12A1'protein_coding'471AELoss-11.773EU ES ENST000003453560.00
2083414.40TMEM176B'protein_coding'29DELoss-21.161ES TMEM176B0
2093424.40PRRX2'protein_coding'14DELoss-21.141ES PRRX20
2103434.40RRAGB'protein_coding'211AELoss-7.031EU E4a_E5a0
2113484.39S100A2'protein_coding'58DEGain21.002EU ES S100A20.00
2123494.39RUVBL1'protein_coding'111AELoss-4.6812EU AB IR CE I8_AR450.00
2133504.39UBN2'protein_coding'118AEGain6.791AB E14_Da0
2143524.39SAPS2'protein_coding'637AELoss-5.153EU CE I1_AR2100.00
2153534.39TINAGL1'protein_coding'215DEGain20.922ES AB TINAGL10
2163544.38WDR8'protein_coding'414AELoss-6.792AB E7_Da0
2173564.38POSTN'protein_coding'524AEGain16.582ES E16a_E20a0.00
2183584.38IL1R1'protein_coding'621DELoss-20.833ES IL1R10.00
2193604.37MACF1'protein_coding'10116AELoss-4.2613EU ES CE E44a_E45a27.27
2203614.37COL5A3'protein_coding'167DELoss-20.6915EU ES COL5A342.86
2213634.36COL1A2'protein_coding'254DELoss-20.591EU COL1A20
2223644.35C6orf1'protein_coding'27AELoss-7.152AB E4_Da0
2233654.35SHF'protein_coding'310AEGain5.391AB E4_Da0
2243664.35FXR2'protein_coding'117AELoss-6.028AB IR CE E13_Aa0
2253674.35ESNA1'protein_coding'522AEGain5.751EU E1a_E2a0
2263684.35FARP1'protein_coding'431AEGain4.1013EU AB IR I27_SR357.14
2273694.35IFT122'protein_coding'432AEGain6.564EU AB E19_Aa0.00
2283704.35DMTF1'protein_coding'323AEGain11.591ES E5a_E7a0
2293714.35PRKCE'protein_coding'217AEGain4.111CE I1_AR340
2303724.34TRIM27'protein_coding'210AEGain7.381ES E6a_E8a0
2313734.34NCAPD2'protein_coding'235AELoss-5.542EU AB E30_Aa0
2323744.32ATXN7L2'protein_coding'213AEGain6.195EU AB E3_Aa66.67
2333754.32SCAMP3'protein_coding'29AELoss-5.831ES E5a_E9a0
2343764.32COL7A1'protein_coding'1118AEGain7.138EU AB E28a_E29a0.00
2353774.32ZNF250'protein_coding'310AELoss-6.393EU AB E6_Dc0.00
2363794.31DDX26B'protein_coding'219AELoss-3.473ES AB E3_Aa0
2373844.29SRPX'protein_coding'211DELoss-19.594EU ES SRPX0.00
2383854.29BACH2'protein_coding'314AEGain4.693EU CE E3a_E4a100.00
2393874.28C9orf156'protein_coding'413AEGain6.322EU AB E5_Dd0
2403904.28SDR39U1'protein_coding'39AELoss-7.011CE I1_AR20
2413914.28EIF4A1'protein_coding'321AELoss-5.972ES E3a_E5a0.00
2423924.28SAFB2'protein_coding'224AEGain6.441ES E9a_E13a0
2433934.28PDPR'protein_coding'222AEGain6.551ES E10a_E12a0
2443944.28PDLIM7'protein_coding'619AELoss-5.951ES E3a_E12a0
2453964.27LRRC32'protein_coding'36DELoss-19.352EU AB LRRC320
2463974.27MAP3K12'protein_coding'115AEGain5.1011EU AB IR I13_SR10.00
2473984.27ABTB2'protein_coding'117AEGain3.111CE I1_AR50
2483994.27C9orf75'protein_coding'37AELoss-5.301EU ENST000003217730
2494024.26LRWD1'protein_coding'115AELoss-6.311ES E3a_E7a0
2504044.26PACS2'protein_coding'124AEGain6.342EU AB E20_Da0
2514054.26ARSA'protein_coding'514AEGain6.162EU AB E3_Aa0


Candidate Differential and Alternative Expression Genes (Gain ONLY)

The following table lists candidate genes ranked according to 'Score'. Only the top 250 genes appear in each list. For a complete list download the results file provided above. To appear in this list, a 'candidate gene' must be differentially expressed at the gene level (DE) or contain at least one alternatively expressed (AE) feature. The 'Score' is based on the fold change as well as other factors for AE events (multiple features supporting the same event, reciprocity, etc.). The 'Event Type' indicates whether the gene was differentially expressed ('DE') or alternatively expressed 'AE'. 'Direction' refers to the direction (+ve/-ve) of the fold change. 'Gain' (+ve) indicates higher expression in library A than library B and vice versa. 'FC' stands for fold change. '# AE Events' is the number of significant alternative expression events observed for each gene. 'AE Codes' refers to various alternative expression subtypes (listed above). The 'Top Feature' is the most significant AE event observed for an AE gene. 'Adjacency' refers to the number of consecutive AE features (potentially supporting the same isoform). 'Adjacency %' refers to the percent of all AE events for a gene that were adjacent to each other.


RankOverall
Rank
ScoreNameGene
Type
Trans.
Count
Exon
Count
Event
Type
DirectionFC# AE
Events
AE CodesTop FeatureAdjacency
%
119.71ZNF294'protein_coding'333AEGain85.731AB E16_Da0
228.66TNRC6B'protein_coding'432AEGain43.751AB E22_Da0
338.37MAN2B2'protein_coding'119AEGain15.787EU AB E15_Da60.00
448.23SLC41A3'protein_coding'517AEGain125.603ES AB E9_Da0
558.22MAN1B1'protein_coding'319AEGain33.326EU AB E9_Da25.00
668.01LY75'protein_coding'443AEGain13.1966EU AB CE ER20a82.26
777.93COL17A1'protein_coding'358DEGain243.588EU ES COL17A128.57
887.82APOL1'protein_coding'39AEGain6.3530EU ES AB IR CE E6_Da88.89
997.54RNASE7'protein_coding'12DEGain186.440N/ARNASE7N/A
10107.49AHSA2'protein_coding'723AEGain23.794AB IR E10_Aa0
11117.25LCP1'protein_coding'221DEGain152.500N/ALCP1N/A
12127.13TNXB'protein_coding'770AEGain3.5318EU ES AB E47_Db43.75
13147.07SLC12A8'protein_coding'320AEGain7.387EU ES ER5a0.00
14166.99BAZ1B'protein_coding'221AEGain16.342ES AB E11_Da0
15176.89SH3RF2'protein_coding'110DEGain118.490N/ASH3RF2N/A
16216.65INCENP'protein_coding'219AEGain14.602EU AB E4_Da0
17266.53GPR107'protein_coding'324AEGain28.384EU ES AB ER16a50.00
18286.49TMEM40'protein_coding'214DEGain89.976ES TMEM4060.00
19296.48KRT14'protein_coding'18DEGain88.970N/AKRT14N/A
20306.45NRG1'protein_coding'1021DEGain87.560N/ANRG1N/A
21336.32MID1'protein_coding'616AEGain8.382EU ES E1a_E5a100.00
22346.30HAS3'protein_coding'37DEGain78.630N/AHAS3N/A
23356.29CYP4F11'protein_coding'315DEGain78.448EU ES AB CYP4F1125.00
24366.28AMIGO2'protein_coding'12DEGain77.600N/AAMIGO2N/A
25376.22PDE4B'protein_coding'524AEGain6.5610EU ES AB ENST0000034151775.00
26386.21FNIP1'protein_coding'320AEGain7.473EU E6a_E7a100.00
27396.18PTPRT'protein_coding'739DEGain72.740N/APTPRTN/A
28406.18TNS4'protein_coding'417DEGain72.330N/ATNS4N/A
29416.17MTMR9'protein_coding'110AEGain30.773EU AB CE E7_Da0
30436.16NFASC'protein_coding'1548DEGain71.640N/ANFASCN/A
31466.14C5orf25'protein_coding'416AEGain46.582AB E4_Aa0
32476.08ACTG2'protein_coding'415DEGain67.531ES ACTG20
33486.05C14orf106'protein_coding'117AEGain9.812EU AB E11_Aa0
34496.03AKAP2'protein_coding'723AEGain11.773EU CE I12_AR35100.00
35506.02DST'protein_coding'9123DEGain28.09172EU ES AB IR DST82.50
36535.88PKIG'protein_coding'814AEGain3.297EU ES AB CE E1a_E4a25.00
37555.87RAB28'protein_coding'413AEGain11.641AB E9_Aa0
38605.75C1S'protein_coding'634AEGain2.582AB CE E13_Da0
39625.75DBNL'protein_coding'216AEGain33.161AB E7_Da0
40655.72PSG4'protein_coding'28DEGain52.770N/APSG4N/A
41665.72SLC27A6'protein_coding'212DEGain52.750N/ASLC27A6N/A
42675.72KCNMB1'protein_coding'14DEGain52.650N/AKCNMB1N/A
43685.71TENC1'protein_coding'432AEGain7.055EU ES AB E16_Da33.33
44695.71FHOD3'protein_coding'225DEGain52.170N/AFHOD3N/A
45715.70PDE1C'protein_coding'833DEGain52.000N/APDE1CN/A
46735.67RASSF6'protein_coding'413DEGain50.970N/ARASSF6N/A
47745.65TP63'protein_coding'717DEGain50.320N/ATP63N/A
48765.60PIK3IP1'protein_coding'28AEGain11.003EU AB CE E6_Aa0
49785.58TTC7A'protein_coding'528AEGain11.403ES AB E10_Da0
50795.57RGS12'protein_coding'525AEGain8.622CE I5_AR110
51805.56TMEM14A'protein_coding'15AEGain8.961EU E1a_E2a0
52825.53STC2'protein_coding'14DEGain46.210N/ASTC2N/A
53835.53NOTCH4'protein_coding'130DEGain46.190N/ANOTCH4N/A
54855.49COL4A5'protein_coding'353DEGain44.870N/ACOL4A5N/A
55875.48PKP1'protein_coding'317DEGain44.760N/APKP1N/A
56905.48NBEA'protein_coding'566AEGain4.8432EU CE ER12a42.86
57925.47CST6'protein_coding'13DEGain44.420N/ACST6N/A
58965.44FGFR1'protein_coding'1137AEGain10.919EU AB IR E11a_E12a66.67
59975.43LAMA3'protein_coding'377DEGain42.990N/ALAMA3N/A
60995.41SPON1'protein_coding'117AEGain5.1537EU AB IR E11_Aa63.64
611005.40EGLN1'protein_coding'15AEGain3.051AB E4_Aa0
621025.39HIST1H3H'protein_coding'23AEGain11.051AB E2_Aa0
631045.37SERPINB5'protein_coding'17DEGain41.450N/ASERPINB5N/A
641075.33BACE1'protein_coding'318AEGain5.776EU AB E7_Aa100.00
651085.33PIP5K2B'protein_coding'211AEGain22.012EU E6a_E7a100.00
661115.32TRIM13'protein_coding'49AEGain9.351AB E1_Dc0
671125.32LGTN'protein_coding'316AEGain9.392EU AB E11_Da0
681135.31RIPK4'protein_coding'314DEGain19.017EU AB RIPK4100.00
691185.28GRP'protein_coding'13DEGain38.770N/AGRPN/A
701205.26AC026412.4'protein_coding'14AEGain8.582AB E3_Da0
711215.25ITGA6'protein_coding'631DEGain38.188EU ES ITGA642.86
721225.25TFIP11'protein_coding'523AEGain8.8119EU AB IR CE I12_AR20
731235.25ENPP1'protein_coding'225AEGain6.584EU E10a_E11a66.67
741245.25C1orf27'protein_coding'214AEGain8.912ES E8a_E12a0.00
751265.25C14orf94'protein_coding'614AEGain7.054EU ES E6a_E8a33.33
761275.24RNF43'protein_coding'212DEGain37.870N/ARNF43N/A
771285.23AGAP3'protein_coding'423AEGain5.763EU ES E2a_E3a0.00
781305.23CYP26A1'protein_coding'39DEGain37.410N/ACYP26A1N/A
791335.21ODZ2'protein_coding'235DEGain36.980N/AODZ2N/A
801345.20PSG5'protein_coding'718DEGain36.790N/APSG5N/A
811355.19DKK1'protein_coding'14DEGain36.490N/ADKK1N/A
821385.16CDH3'protein_coding'116DEGain35.730N/ACDH3N/A
831425.15HLA-G'protein_coding'513AEGain30.7313EU AB IR E5_Da50.00
841455.13AL353732.14'protein_coding'14DEGain35.070N/AAL353732.14N/A
851475.11INPP5B'protein_coding'631AEGain8.483EU AB E2_Ab0.00
861565.07SDCBP2'protein_coding'513AEGain6.081AB E3_Aa0
871625.05CDH13'protein_coding'114DEGain33.090N/ACDH13N/A
881645.02EGFL9'protein_coding'412DEGain32.480N/AEGFL9N/A
891675.01LTB'protein_coding'24DEGain32.180N/ALTBN/A
901704.99FALZ'protein_coding'538AEGain7.895EU ES E4a_E6a50.00
911714.99C2orf54'protein_coding'37DEGain31.680N/AC2orf54N/A
921734.98MYH10'protein_coding'446AEGain7.684EU AB E43_Aa0.00
931754.97PSG1'protein_coding'512DEGain31.400N/APSG1N/A
941764.97ITGA3'protein_coding'226DEGain31.371ES ITGA30
951774.96TNC'protein_coding'528DEGain15.6818EU ES TNC94.12
961794.96RIN2'protein_coding'112AEGain12.775EU ES E5a_E7a100.00
971874.91WNT5B'protein_coding'27DEGain30.120N/AWNT5BN/A
981894.91PRKAR2A'protein_coding'211AEGain8.912ES AB E9a_E11a0
991924.90SNCA'protein_coding'511DEGain29.770N/ASNCAN/A
1001934.90FAM35A'protein_coding'311AEGain8.631AB E2_Da0
1011944.89ADRB2'protein_coding'11DEGain29.700N/AADRB2N/A
1021954.89LAMC2'protein_coding'224DEGain29.591ES LAMC20
1031974.88SDHALP2'protein_coding'114AEGain9.213ES AB E5_Aa0
1042004.87C6orf89'protein_coding'415AEGain8.571AB E3_Aa0
1052034.86KCNK17'protein_coding'27DEGain29.040N/AKCNK17N/A
1062074.85RTN2'protein_coding'212AEGain9.2314EU AB IR E3a_E4a0.00
1072084.84ACAD8'protein_coding'212AEGain6.061AB E9_Da0
1082104.84PLCH2'protein_coding'633DEGain28.590N/APLCH2N/A
1092114.83C2orf3'protein_coding'220AEGain6.004ES AB E15_Da0
1102124.83MRGPRX3'protein_coding'13DEGain28.380N/AMRGPRX3N/A
1112134.82ABCC3'protein_coding'131DEGain28.330N/AABCC3N/A
1122174.81PCM1'protein_coding'445AEGain8.453EU ES E30a_E32a0.00
1132184.81UQCC'protein_coding'1425AEGain7.061AB E1_Da0
1142194.80KIF1B'protein_coding'759AEGain10.8321EU ES AB E31a_E33a63.16
1152204.80AL645939.6'protein_coding'24AEGain9.004AB CE I3_AR20
1162254.78KIAA1217'protein_coding'930AEGain4.8710EU ES E15a_E17a66.67
1172284.77TTC37'protein_coding'143AEGain14.422EU AB E31_Da0
1182304.77PEF1'protein_coding'15AEGain24.301CE I2_AR30
1192324.76AYTL1'protein_coding'114AEGain18.844EU IR E1a_E2a0
1202354.75SCNN1G'protein_coding'113DEGain26.960N/ASCNN1GN/A
1212374.74ARMC4'protein_coding'221DEGain26.740N/AARMC4N/A
1222384.73PPP1CB'protein_coding'412AEGain14.251ES E5a_E8a0
1232404.71EHD3'protein_coding'16DEGain26.200N/AEHD3N/A
1242424.71RASSF10'protein_coding'14DEGain26.150N/ARASSF10N/A
1252434.71GPR56'protein_coding'418DEGain26.110N/AGPR56N/A
1262444.70CREB3L4'protein_coding'617AEGain6.053EU AB E7_Aa0.00
1272454.70JPH2'protein_coding'27DEGain26.030N/AJPH2N/A
1282464.70ABLIM1'protein_coding'1540AEGain12.9814EU ES AB E7b_E8a90.91
1292474.70CARD10'protein_coding'325DEGain26.013EU ES CARD100.00
1302484.69WDR20'protein_coding'58AEGain6.2812AB CE E4_Db0
1312494.69RBM28'protein_coding'119AEGain14.191AB E11_Da0
1322524.68DDB2'protein_coding'513AEGain5.314EU AB E9_Da100.00
1332554.66USP28'protein_coding'225AEGain6.671ES E7a_E9a0
1342584.65SAA4'protein_coding'14AEGain6.181AB E2_Da0
1352634.64GALNT14'protein_coding'419DEGain24.880N/AGALNT14N/A
1362664.63TRIM29'protein_coding'19DEGain24.770N/ATRIM29N/A
1372674.63C21orf2'protein_coding'412AEGain7.394EU ES AB E5_Aa50.00
1382734.60DHX58'protein_coding'114AEGain5.567EU ER12a66.67
1392774.60NFATC3'protein_coding'413AEGain15.452AB CE E12_Aa0
1402844.57GPR103'protein_coding'29DEGain23.790N/AGPR103N/A
1412874.55SUMF1'protein_coding'313AEGain5.535EU CE I10_AR240.00
1422894.54SLC26A10'protein_coding'738AEGain5.6617EU AB IR I28_AR10.00
1432914.53SACM1L'protein_coding'120AEGain7.301AB E17_Da0
1442924.53GPT2'protein_coding'112DEGain12.347EU GPT266.67
1452944.53PSG9'protein_coding'59DEGain23.090N/APSG9N/A
1462954.52CUL7'protein_coding'126AEGain19.545EU ES AB E6_Aa0.00
1472974.52NEK1'protein_coding'336AEGain8.323EU AB E2_Da100.00
1482984.52ZMYM6'protein_coding'525AEGain4.834EU AB E1_Ab100.00
1492994.51ERG'protein_coding'1020DEGain22.820N/AERGN/A
1503044.50MFNG'protein_coding'18DEGain22.630N/AMFNGN/A
1513064.50ZNF323'protein_coding'311AEGain3.3710ES AB IR I4_SR1100.00
1523074.50MTR'protein_coding'133AEGain6.982AB CE E31_Aa0
1533094.49LRRC42'protein_coding'315AEGain6.231ES E1b_E3a0
1543104.49PDCL3'protein_coding'28AEGain13.641CE I6_AR10
1553154.47CPA4'protein_coding'111DEGain22.183EU ES CPA450.00
1563164.47RPGR'protein_coding'622AEGain5.904EU AB E4_Aa0
1573194.46SAMD5'protein_coding'12DEGain21.990N/ASAMD5N/A
1583214.45RAB6B'protein_coding'18AEGain11.4012EU E3a_E4a90.91
1593234.44SMYD1'protein_coding'110DEGain21.770N/ASMYD1N/A
1603244.44SCRN2'protein_coding'210AEGain6.031AB E2_Aa0
1613294.43AC008449.6'protein_coding'14DEGain21.550N/AAC008449.6N/A
1623334.42MAP2'protein_coding'623DEGain11.597EU MAP266.67
1633364.42STARD5'protein_coding'26AEGain6.101AB E2_Da0
1643374.42SNX13'protein_coding'534AEGain7.404EU AB E27_Da0.00
1653384.41C9orf61'protein_coding'515DEGain21.300N/AC9orf61N/A
1663474.39FOXI3'protein_coding'13DEGain21.020N/AFOXI3N/A
1673484.39S100A2'protein_coding'58DEGain21.002EU ES S100A20.00
1683504.39UBN2'protein_coding'118AEGain6.791AB E14_Da0
1693534.39TINAGL1'protein_coding'215DEGain20.922ES AB TINAGL10
1703554.38BEX1'protein_coding'13DEGain20.880N/ABEX1N/A
1713564.38POSTN'protein_coding'524AEGain16.582ES E16a_E20a0.00
1723594.38TNNT2'protein_coding'926DEGain20.820N/ATNNT2N/A
1733654.35SHF'protein_coding'310AEGain5.391AB E4_Da0
1743674.35ESNA1'protein_coding'522AEGain5.751EU E1a_E2a0
1753684.35FARP1'protein_coding'431AEGain4.1013EU AB IR I27_SR357.14
1763694.35IFT122'protein_coding'432AEGain6.564EU AB E19_Aa0.00
1773704.35DMTF1'protein_coding'323AEGain11.591ES E5a_E7a0
1783714.35PRKCE'protein_coding'217AEGain4.111CE I1_AR340
1793724.34TRIM27'protein_coding'210AEGain7.381ES E6a_E8a0
1803744.32ATXN7L2'protein_coding'213AEGain6.195EU AB E3_Aa66.67
1813764.32COL7A1'protein_coding'1118AEGain7.138EU AB E28a_E29a0.00
1823784.31CALML3'protein_coding'11DEGain19.880N/ACALML3N/A
1833834.30DSP'protein_coding'228DEGain19.690N/ADSPN/A
1843854.29BACH2'protein_coding'314AEGain4.693EU CE E3a_E4a100.00
1853864.28IRX4'protein_coding'15DEGain19.480N/AIRX4N/A
1863874.28C9orf156'protein_coding'413AEGain6.322EU AB E5_Dd0
1873884.28FGFR2'protein_coding'1634DEGain19.470N/AFGFR2N/A
1883894.28SPP1'protein_coding'49DEGain19.470N/ASPP1N/A
1893924.28SAFB2'protein_coding'224AEGain6.441ES E9a_E13a0
1903934.28PDPR'protein_coding'222AEGain6.551ES E10a_E12a0
1913974.27MAP3K12'protein_coding'115AEGain5.1011EU AB IR I13_SR10.00
1923984.27ABTB2'protein_coding'117AEGain3.111CE I1_AR50
1934004.27DSC3'protein_coding'217DEGain19.230N/ADSC3N/A
1944044.26PACS2'protein_coding'124AEGain6.342EU AB E20_Da0
1954054.26ARSA'protein_coding'514AEGain6.162EU AB E3_Aa0
1964084.25FAM83B'protein_coding'15DEGain19.050N/AFAM83BN/A
1974094.25PDE5A'protein_coding'423AEGain5.224EU AB E15_Da0.00
1984124.25FBXL14'protein_coding'12AEGain5.083CE I1_AR20
1994144.24SH3TC1'protein_coding'322DEGain18.900N/ASH3TC1N/A
2004164.24FAM134B'protein_coding'210AEGain18.984EU AB E6_Aa0
2014184.24OXTR'protein_coding'14DEGain10.483EU OXTR100.00
2024224.22HERC2'protein_coding'193AEGain17.0316EU AB E41_Da7.69
2034234.22EIF4E2'protein_coding'819AEGain5.181AB E6_Db0
2044244.22SLC35F5'protein_coding'321AEGain11.711AB E15_Da0
2054274.22AC093283.3'protein_coding'214DEGain18.585EU ES AC093283.30.00
2064284.21CRYBB2'protein_coding'28AEGain6.943EU E5a_E6a50.00
2074344.20NTAN1'protein_coding'110AEGain3.882EU AB E7_Aa0
2084384.20MAP4K4'protein_coding'535AEGain11.274EU ES E13a_E18a66.67
2094394.20C4orf49'protein_coding'26DEGain18.350N/AC4orf49N/A
2104414.19IKZF4'protein_coding'18AEGain5.794EU AB E2_Aa0.00
2114444.19EPOR'protein_coding'18AEGain6.581EU E5a_E6a0
2124454.18TMEM178'protein_coding'26DEGain18.170N/ATMEM178N/A
2134464.18EFCAB2'protein_coding'616AEGain3.992EU AB E1_Ab0
2144474.18SREBF2'protein_coding'119AEGain6.301ES E7a_E9a0
2154484.18EDA2R'protein_coding'311AEGain6.471AB E7_Ab0
2164494.18MTHFR'protein_coding'419AEGain5.282EU AB E5_Da0
2174504.18PARP1'protein_coding'428DEGain18.080N/APARP1N/A
2184514.17TTC23'protein_coding'619AEGain6.263ES AB CE E17_Aa0
2194534.17C19orf33'protein_coding'14DEGain18.040N/AC19orf33N/A
2204544.17KCNH3'protein_coding'115DEGain18.040N/AKCNH3N/A
2214554.17DHX36'protein_coding'327AEGain6.221ES E5a_E7a0
2224574.17PSG2'protein_coding'512DEGain17.940N/APSG2N/A
2234584.16SYNJ2'protein_coding'532AEGain12.534ES AB ENST000003671220.00
2244594.16PPP2R5D'protein_coding'217AEGain5.654ES AB E8_Da0
2254624.16ITGA2'protein_coding'130DEGain17.823EU ITGA20.00
2264654.14KCNMA1'protein_coding'1351DEGain17.6510EU ES CE KCNMA112.50
2274684.14RPL23'protein_coding'411AEGain6.450N/AENST00000245857N/A
2284694.14NETO2'protein_coding'19DEGain17.580N/ANETO2N/A
2294734.12TTBK2'protein_coding'322AEGain11.084ES AB E11_Da0
2304744.12FAHD2B'protein_coding'18AEGain6.141AB E7_Aa0
2314754.11SEMA3C'protein_coding'118DEGain17.293EU ES CE SEMA3C0.00
2324764.11SLK'protein_coding'219AEGain5.173EU ENST00000369755100.00
2334784.11PRRG1'protein_coding'26AEGain11.492EU E1a_E2a100.00
2344804.10RSF1'protein_coding'216AEGain6.291ES E4a_E6a0
2354854.09LASS6'protein_coding'213DEGain17.070N/ALASS6N/A
2364864.09FGF18'protein_coding'15AEGain5.901AB E3_Da0
2374904.09MTO1'protein_coding'416AEGain6.172AB E9_Da0
2384944.08PTGR1'protein_coding'718AEGain4.064EU AB E9_Da50.00
2394994.06CPD'protein_coding'121AEGain6.291ES E12a_E14a0
2405014.06PBEF1'protein_coding'417AEGain3.231ES E8a_E11a0
2415024.05ALOXE3'protein_coding'215DEGain16.604EU AB ALOXE30.00
2425094.04COBLL1'protein_coding'521DEGain16.501EU COBLL10
2435114.04FHOD1'protein_coding'122AEGain3.652EU AB E15_Da0
2445174.02PRR7'protein_coding'26AEGain4.571AB E2_Aa0
2455184.02SYNJ1'protein_coding'839AEGain3.792EU E20a_E21a100.00
2465194.02ANKLE2'protein_coding'214AEGain6.191ES E5a_E7a0
2475204.02AC093729.2'protein_coding'19DEGain16.240N/AAC093729.2N/A
2485224.02SLC38A1'protein_coding'221DEGain16.211ES SLC38A10
2495244.02DENND3'protein_coding'329AEGain5.818EU ES AB E20_Da33.33
2505254.01GAA'protein_coding'222AEGain10.471AB E9_Aa0
2515274.01HEY1'protein_coding'26AEGain4.663IR I3_AR10


Candidate Differential and Alternative Expression Genes (Loss ONLY)

The following table lists candidate genes ranked according to 'Score'. Only the top 250 genes appear in each list. For a complete list download the results file provided above. To appear in this list, a 'candidate gene' must be differentially expressed at the gene level (DE) or contain at least one alternatively expressed (AE) feature. The 'Score' is based on the fold change as well as other factors for AE events (multiple features supporting the same event, reciprocity, etc.). The 'Event Type' indicates whether the gene was differentially expressed ('DE') or alternatively expressed 'AE'. 'Direction' refers to the direction (+ve/-ve) of the fold change. 'Gain' (+ve) indicates higher expression in library A than library B and vice versa. 'FC' stands for fold change. '# AE Events' is the number of significant alternative expression events observed for each gene. 'AE Codes' refers to various alternative expression subtypes (listed above). The 'Top Feature' is the most significant AE event observed for an AE gene. 'Adjacency' refers to the number of consecutive AE features (potentially supporting the same isoform). 'Adjacency %' refers to the percent of all AE events for a gene that were adjacent to each other.


RankOverall
Rank
ScoreNameGene
Type
Trans.
Count
Exon
Count
Event
Type
DirectionFC# AE
Events
AE CodesTop FeatureAdjacency
%
1137.08PTPRE'protein_coding'222AELoss-13.7312EU ES AB CE I1_SR883.33
2157.06OGN'protein_coding'210DELoss-133.400N/AOGNN/A
3186.79DCN'protein_coding'610DELoss-110.610N/ADCNN/A
4196.77SFRP4'protein_coding'16DELoss-109.241EU SFRP40
5206.72DLC1'protein_coding'320AELoss-61.0310EU ES E5a_E8a88.89
6226.63MFSD2'protein_coding'215AELoss-15.501ES E5a_E12a0
7236.57FGF1'protein_coding'1018AELoss-13.565EU ES E1b_E5a25.00
8246.57GREM1'protein_coding'24DELoss-94.850N/AGREM1N/A
9256.56TEP1'protein_coding'257AELoss-11.3610EU ES AB E25_Da37.50
10276.52LUM'protein_coding'13DELoss-91.460N/ALUMN/A
11316.36DPT'protein_coding'14DELoss-82.170N/ADPTN/A
12326.35CFD'protein_coding'15DELoss-81.850N/ACFDN/A
13426.17MFAP4'protein_coding'28DELoss-71.820N/AMFAP4N/A
14446.16AKR1C1'protein_coding'211DELoss-71.571ES AKR1C10
15456.15CALD1'protein_coding'417AELoss-9.341EU E4a_E5a0
16515.95SFRP2'protein_coding'13DELoss-61.930N/ASFRP2N/A
17525.89APOD'protein_coding'15DELoss-59.190N/AAPODN/A
18545.88SERPINA1'protein_coding'513AELoss-14.963CE I2_SR30
19565.86C3orf62'protein_coding'13AELoss-13.153EU AB CE E1_Da0
20575.81PIGS'protein_coding'323AELoss-9.164EU ES AB E6b_E8a0.00
21585.77PTGDS'protein_coding'310DELoss-54.470N/APTGDSN/A
22595.75SERPINF1'protein_coding'18DELoss-53.981EU SERPINF10
23615.75WISP2'protein_coding'411DELoss-53.890N/AWISP2N/A
24635.73FBLN1'protein_coding'627DELoss-53.080N/AFBLN1N/A
25645.72KIAA1191'protein_coding'39AELoss-9.581ES ENST000003937280
26705.70WDR54'protein_coding'313AELoss-7.319EU AB IR E1b_E1e0.00
27725.68ALDH1A1'protein_coding'216DELoss-51.370N/AALDH1A1N/A
28755.63AC009171.3'protein_coding'15AELoss-11.3013EU AB IR CE E2_Aa0
29775.58CXCL12'protein_coding'610DELoss-22.102EU ES CXCL12100.00
30815.56TPM1'protein_coding'921AELoss-5.008EU ES E4a_E5a28.57
31845.49OMD'protein_coding'13DELoss-44.980N/AOMDN/A
32865.49ASPN'protein_coding'311DELoss-44.830N/AASPNN/A
33885.48ARHGEF7'protein_coding'833AELoss-20.636EU ES ER1b100.00
34895.48SOD3'protein_coding'12DELoss-44.590N/ASOD3N/A
35915.47AC127496.5'protein_coding'134AELoss-8.8216EU CE I9_AR666.67
36935.47TRIM28'protein_coding'217AELoss-9.591ES E1a_E3a0
37945.44PFDN1'protein_coding'14AELoss-8.283AB CE I2_AR50
38955.44C11orf53'protein_coding'25DELoss-43.420N/AC11orf53N/A
39985.42PENK'protein_coding'12DELoss-42.800N/APENKN/A
401015.39TRUB2'protein_coding'18AELoss-7.531AB E7_Aa0
411035.39INTS4'protein_coding'123AELoss-8.501AB E18_Aa0
421055.34ITPR1'protein_coding'464AELoss-4.1426EU AB IR CE I42_AR153.85
431065.34PDLIM5'protein_coding'522AELoss-5.961ES E5a_E7b0
441095.33RAVER1'protein_coding'216AELoss-11.681ES E1a_E9a0
451105.32S100A3'protein_coding'25AELoss-5.572EU ES ER1a100.00
461145.30DPM3'protein_coding'35AELoss-12.114EU AB E2_Ab100.00
471155.30MYH11'protein_coding'443AELoss-7.464EU ER42a66.67
481165.29CDK10'protein_coding'417AELoss-7.862AB E6_Da0
491175.28PI16'protein_coding'17DELoss-38.780N/API16N/A
501195.27BGN'protein_coding'211DELoss-38.540N/ABGNN/A
511255.25MSC'protein_coding'12DELoss-37.950N/AMSCN/A
521295.23PRPF40B'protein_coding'431AELoss-5.9819EU AB IR CE E16_Aa66.67
531315.22CLIC2'protein_coding'27DELoss-37.231ES CLIC20
541325.22C13orf33'protein_coding'15DELoss-37.140N/AC13orf33N/A
551365.19FOXJ3'protein_coding'519AELoss-6.901ES E6a_E8a0
561375.17CHRDL1'protein_coding'419DELoss-36.121AB CHRDL10
571395.16GPR133'protein_coding'327DELoss-35.680N/AGPR133N/A
581405.16TNPO2'protein_coding'125AELoss-7.681ES E9a_E13a0
591415.15LSP1'protein_coding'717DELoss-35.580N/ALSP1N/A
601435.14ADH1B'protein_coding'211DELoss-35.180N/AADH1BN/A
611445.13SERPINB2'protein_coding'211DELoss-35.110N/ASERPINB2N/A
621465.11PDCD11'protein_coding'136AELoss-4.611I13_SR20
631485.11DPH1'protein_coding'113AELoss-7.9815AB IR CE E2_Aa0
641495.10ABI3BP'protein_coding'567DELoss-34.3833EU ES ABI3BP53.12
651505.10IL33'protein_coding'17DELoss-34.300N/AIL33N/A
661515.10C1orf86'protein_coding'817AELoss-6.593EU AB ER3a0.00
671525.10NDST1'protein_coding'114AELoss-6.941ES E5a_E7a0
681535.09SORBS1'protein_coding'1643AELoss-5.977EU ES E4a_E5a40.00
691545.09CASP1'protein_coding'515AELoss-5.672ES AB E2_Aa0
701555.07HSPB6'protein_coding'13DELoss-33.550N/AHSPB6N/A
711575.06RHBDD3'protein_coding'29AELoss-6.821ES E3a_E6a0
721585.06CTHRC1'protein_coding'27DELoss-33.360N/ACTHRC1N/A
731595.06C12orf50'protein_coding'216DELoss-33.320N/AC12orf50N/A
741605.06AC110079.3'protein_coding'211AELoss-10.212ES AB E9_Da0
751615.05C3'protein_coding'141DELoss-33.211EU C30
761635.04HNRNPA1L2'protein_coding'38AELoss-7.094EU AB E7_Aa100.00
771655.01CLEC3B'protein_coding'13DELoss-32.290N/ACLEC3BN/A
781665.01HS2ST1'protein_coding'415AELoss-7.617EU ES ER10a50.00
791685.00ECM2'protein_coding'314DELoss-31.920N/AECM2N/A
801694.99DES'protein_coding'19DELoss-31.850N/ADESN/A
811724.98SLC7A5'protein_coding'110AELoss-6.291ES E2a_E5a0
821744.97FBLN2'protein_coding'320DELoss-31.400N/AFBLN2N/A
831784.96CTNS'protein_coding'317AELoss-6.852EU ES E2a_E7a0.00
841804.95BDKRB1'protein_coding'13DELoss-30.960N/ABDKRB1N/A
851814.95MRPL39'protein_coding'211AELoss-9.0335AB IR I90
861824.94FKBP15'protein_coding'128AELoss-9.063EU AB E20_Da0
871834.94BAIAP2L1'protein_coding'114AELoss-2.103ES AB CE I3_AR100
881844.93C17orf101'protein_coding'312AELoss-17.202AB E8_Da0
891854.93CLDN14'protein_coding'57DELoss-30.430N/ACLDN14N/A
901864.93LRRC57'protein_coding'28AELoss-7.874EU AB E1_Da0.00
911884.91DOCK7'protein_coding'658AELoss-8.402EU ES E50a_E52a0.00
921904.90MYOM2'protein_coding'137DELoss-29.890N/AMYOM2N/A
931914.90ABCA8'protein_coding'243DELoss-29.770N/AABCA8N/A
941964.88ZFPM2'protein_coding'314DELoss-29.460N/AZFPM2N/A
951984.87OLFML3'protein_coding'38DELoss-29.240N/AOLFML3N/A
961994.87AL162734.15'pseudogene'14AELoss-6.581AB E1_Da0
972014.86CPZ'protein_coding'315DELoss-29.090N/ACPZN/A
982024.86FAM180A'protein_coding'14DELoss-29.051AB FAM180A0
992044.86PID1'protein_coding'511DELoss-29.010N/APID1N/A
1002054.86WDR61'protein_coding'111AELoss-20.4650AB IR I4_SR10
1012064.86ORMDL2'protein_coding'14AELoss-8.619AB IR CE E3_Da0
1022094.84GTPBP6'protein_coding'17AELoss-7.501ES E3a_E5a0
1032144.82PCOLCE'protein_coding'19DELoss-28.280N/APCOLCEN/A
1042154.82GDAP2'protein_coding'215AELoss-6.581AB E1_Da0
1052164.81FGF7'protein_coding'14DELoss-28.100N/AFGF7N/A
1062214.80IL6'protein_coding'616DELoss-27.780N/AIL6N/A
1072224.80STATIP1'protein_coding'322AELoss-7.953ES E15a_E18a0.00
1082234.79PTGES'protein_coding'13DELoss-27.670N/APTGESN/A
1092244.79AP1G2'protein_coding'223AELoss-6.736EU AB E11_Da0.00
1102264.78CSF3'protein_coding'411DELoss-27.400N/ACSF3N/A
1112274.78CTSK'protein_coding'210DELoss-27.390N/ACTSKN/A
1122294.77GRLF1'protein_coding'29AELoss-5.901ES E2a_E4a0
1132314.77MMP2'protein_coding'113DELoss-27.190N/AMMP2N/A
1142334.76GNB4'protein_coding'110AELoss-6.345EU AB E4_Da0.00
1152344.76EPB41L2'protein_coding'727AELoss-12.547EU E2a_E3b83.33
1162364.75DNAJC7'protein_coding'114AELoss-6.663ES AB E8a_E10a0
1172394.73C3orf26'protein_coding'110AELoss-7.004CE I1_AR50
1182414.71HTRA1'protein_coding'19DELoss-26.180N/AHTRA1N/A
1192504.69AMMECR1L'protein_coding'210AELoss-16.955EU ES AB E2_Da0.00
1202514.69LRRC15'protein_coding'12DELoss-25.750N/ALRRC15N/A
1212534.67PODN'protein_coding'317DELoss-25.530N/APODNN/A
1222544.67SMARCC2'protein_coding'331AELoss-5.112EU ES ENST000003474710.00
1232564.66PLA2G2A'protein_coding'28DELoss-25.340N/APLA2G2AN/A
1242574.66CPXM1'protein_coding'114DELoss-25.210N/ACPXM1N/A
1252594.65PLEKHA4'protein_coding'220AELoss-13.904ES E8a_E13a33.33
1262604.65ZDHHC13'protein_coding'217AELoss-6.761ES E1a_E3a0
1272614.65USMG5'protein_coding'513AELoss-7.941EU E2a_E3a0
1282624.64ZFYVE26'protein_coding'245AELoss-6.691ES E9a_E11a0
1292644.64SUV39H2'protein_coding'512AELoss-7.942EU E1a_E2a0.00
1302654.63TMOD1'protein_coding'414DELoss-24.830N/ATMOD1N/A
1312684.62DNMT1'protein_coding'241AELoss-7.002ES AB E3a_E7a0
1322694.62TFPI'protein_coding'515DELoss-24.513EU ES AB TFPI0.00
1332704.61PSMC5'protein_coding'214AELoss-6.211ES E4a_E7a0
1342714.61MKNK1'protein_coding'719AELoss-8.391EU E3a_E4a0
1352724.61ARHGAP8'protein_coding'1740AELoss-5.8522EU AB E9b_E10a55.56
1362744.60DOPEY1'protein_coding'345AELoss-7.0944EU ES AB IR CE I27_SR148.39
1372754.60ISLR'protein_coding'24DELoss-24.220N/AISLRN/A
1382764.60AC116366.4'protein_coding'49AELoss-16.277EU ES E2a_E7a100.00
1392784.60OXNAD1'protein_coding'19AELoss-5.484EU AB I4_SR30
1402794.59LPIN1'protein_coding'529AELoss-6.371ES E4a_E6a0
1412804.58THBS2'protein_coding'224DELoss-23.920N/ATHBS2N/A
1422814.58C7'protein_coding'118DELoss-23.910N/AC7N/A
1432824.58EDNRB'protein_coding'29DELoss-12.652ES EDNRB100.00
1442834.58AADAC'protein_coding'15DELoss-23.840N/AAADACN/A
1452854.56MYH3'protein_coding'140AELoss-5.5029EU AB IR I2733.33
1462864.56KIAA0415'protein_coding'218AELoss-7.771ES E14a_E17a0
1472884.55FXYD1'protein_coding'18DELoss-23.400N/AFXYD1N/A
1482904.54FN1'protein_coding'1050DELoss-23.205EU ES FN150.00
1492934.53LTBP4'protein_coding'541DELoss-12.3333EU ES AB LTBP463.33
1502964.52DGKZ'protein_coding'435AELoss-4.562AB E28_Aa0
1513004.51COLEC12'protein_coding'211DELoss-22.750N/ACOLEC12N/A
1523014.51SF1'protein_coding'520AELoss-6.020N/AENST00000334944N/A
1533024.50MFAP5'protein_coding'210DELoss-22.690N/AMFAP5N/A
1543034.50CSPG4'protein_coding'110AELoss-7.102ES AB E2a_E4a0
1553054.50SLC29A1'protein_coding'924AELoss-17.5610EU ES AB IR E1a_E4c80.00
1563084.50BHLHE22'protein_coding'11DELoss-22.560N/ABHLHE22N/A
1573114.48PLCD1'protein_coding'216AELoss-7.163EU AB E8_Aa0.00
1583124.48S100A4'protein_coding'49DELoss-22.282ES AB S100A40
1593134.48KIAA0907'protein_coding'318AELoss-6.661ES E4a_E8a0
1603144.48TMEM176A'protein_coding'17DELoss-22.250N/ATMEM176AN/A
1613174.46FMNL1'protein_coding'332AELoss-45.8731EU ES AB ER5a92.59
1623184.46AC087521.10'protein_coding'11DELoss-22.000N/AAC087521.10N/A
1633204.46VEGFC'protein_coding'17DELoss-21.940N/AVEGFCN/A
1643224.45ELN'protein_coding'1044DELoss-21.800N/AELNN/A
1653254.44AKR1C2'protein_coding'422DELoss-21.640N/AAKR1C2N/A
1663264.44F2RL2'protein_coding'12DELoss-21.640N/AF2RL2N/A
1673274.43TNFAIP6'protein_coding'16DELoss-21.620N/ATNFAIP6N/A
1683284.43C11orf60'protein_coding'213AELoss-5.691AB E7_Aa0
1693304.43HDAC9'protein_coding'634AELoss-14.258EU ES AB CE E27_Aa50.00
1703314.43DLG1'protein_coding'833AELoss-5.873ES E13a_E17a0.00
1713324.42RFX3'protein_coding'825AELoss-6.853EU ES CE E6a_E9a0.00
1723344.42RP11-308B5.3'processed_pseudogene'11DELoss-21.370N/ARP11-308B5.3N/A
1733354.42CDCP1'protein_coding'19AELoss-3.331CE I4_AR10
1743394.41COL12A1'protein_coding'471AELoss-11.773EU ES ENST000003453560.00
1753404.40CILP'protein_coding'19DELoss-21.170N/ACILPN/A
1763414.40TMEM176B'protein_coding'29DELoss-21.161ES TMEM176B0
1773424.40PRRX2'protein_coding'14DELoss-21.141ES PRRX20
1783434.40RRAGB'protein_coding'211AELoss-7.031EU E4a_E5a0
1793444.40SPOCK1'protein_coding'212DELoss-21.100N/ASPOCK1N/A
1803454.40XG'protein_coding'212DELoss-21.090N/AXGN/A
1813464.40DTX1'protein_coding'19DELoss-21.060N/ADTX1N/A
1823494.39RUVBL1'protein_coding'111AELoss-4.6812EU AB IR CE I8_AR450.00
1833514.39VCAM1'protein_coding'414DELoss-20.980N/AVCAM1N/A
1843524.39SAPS2'protein_coding'637AELoss-5.153EU CE I1_AR2100.00
1853544.38WDR8'protein_coding'414AELoss-6.792AB E7_Da0
1863574.38RAB33A'protein_coding'12DELoss-20.840N/ARAB33AN/A
1873584.38IL1R1'protein_coding'621DELoss-20.833ES IL1R10.00
1883604.37MACF1'protein_coding'10116AELoss-4.2613EU ES CE E44a_E45a27.27
1893614.37COL5A3'protein_coding'167DELoss-20.6915EU ES COL5A342.86
1903624.37CYP1B1'protein_coding'25DELoss-20.660N/ACYP1B1N/A
1913634.36COL1A2'protein_coding'254DELoss-20.591EU COL1A20
1923644.35C6orf1'protein_coding'27AELoss-7.152AB E4_Da0
1933664.35FXR2'protein_coding'117AELoss-6.028AB IR CE E13_Aa0
1943734.34NCAPD2'protein_coding'235AELoss-5.542EU AB E30_Aa0
1953754.32SCAMP3'protein_coding'29AELoss-5.831ES E5a_E9a0
1963774.32ZNF250'protein_coding'310AELoss-6.393EU AB E6_Dc0.00
1973794.31DDX26B'protein_coding'219AELoss-3.473ES AB E3_Aa0
1983804.31FAP'protein_coding'126DELoss-19.820N/AFAPN/A
1993814.30GPC3'protein_coding'311DELoss-19.770N/AGPC3N/A
2003824.30RAMP2'protein_coding'14DELoss-19.760N/ARAMP2N/A
2013844.29SRPX'protein_coding'211DELoss-19.594EU ES SRPX0.00
2023904.28SDR39U1'protein_coding'39AELoss-7.011CE I1_AR20
2033914.28EIF4A1'protein_coding'321AELoss-5.972ES E3a_E5a0.00
2043944.28PDLIM7'protein_coding'619AELoss-5.951ES E3a_E12a0
2053954.28IGFBP7'protein_coding'15DELoss-19.360N/AIGFBP7N/A
2063964.27LRRC32'protein_coding'36DELoss-19.352EU AB LRRC320
2073994.27C9orf75'protein_coding'37AELoss-5.301EU ENST000003217730
2084014.26DCAMKL1'protein_coding'521DELoss-19.190N/ADCAMKL1N/A
2094024.26LRWD1'protein_coding'115AELoss-6.311ES E3a_E7a0
2104034.26CD34'protein_coding'411DELoss-19.160N/ACD34N/A
2114064.25AKR1C3'protein_coding'19DELoss-19.081ES AKR1C30
2124074.25ECM1'protein_coding'312DELoss-19.061ES ECM10
2134104.25SBNO2'protein_coding'341AELoss-5.112ES E5a_E7a0.00
2144114.25LOX'protein_coding'28DELoss-19.001ES LOX0
2154134.24MSX1'protein_coding'22DELoss-18.960N/AMSX1N/A
2164154.24IGF2'protein_coding'817DELoss-18.850N/AIGF2N/A
2174174.24MTUS1'protein_coding'619AELoss-21.935EU ES E9a_E10a50.00
2184194.23CXCR7'protein_coding'12DELoss-18.800N/ACXCR7N/A
2194204.23IFI27'protein_coding'15DELoss-18.790N/AIFI27N/A
2204214.23ZEB2'protein_coding'520DELoss-18.701ES ZEB20
2214254.22GAL'protein_coding'16DELoss-18.611ES GAL0
2224264.22HRH1'protein_coding'24DELoss-18.590N/AHRH1N/A
2234294.21ENPEP'protein_coding'120DELoss-18.520N/AENPEPN/A
2244304.21CFH'protein_coding'425DELoss-18.501ES CFH0
2254314.21PCOLCE2'protein_coding'19DELoss-18.480N/APCOLCE2N/A
2264324.21WDR22'protein_coding'210AELoss-6.631ES E1a_E3a0
2274334.20TNNT3'protein_coding'1435DELoss-18.420N/ATNNT3N/A
2284354.20CLASP2'protein_coding'547AELoss-5.972EU AB E44_Aa0
2294364.20STIP1'protein_coding'317AELoss-5.751ES E3a_E5a0
2304374.20XDH'protein_coding'136AELoss-3.2611EU ES AB ER5a25.00
2314404.19COL6A3'protein_coding'850DELoss-18.298EU ES COL6A314.29
2324424.19MICA'protein_coding'519AELoss-6.134EU ES AB E2a_E5a50.00
2334434.19PDGFRL'protein_coding'29DELoss-18.241ES PDGFRL0
2344524.17AGPAT9'protein_coding'215AELoss-6.112EU ES E2a_E4a0.00
2354564.17COMP'protein_coding'119DELoss-17.970N/ACOMPN/A
2364604.16POLR2B'protein_coding'330AELoss-5.921ES E11a_E14a0
2374614.16ACOT9'protein_coding'422AELoss-6.211EU E1a_E2a0
2384634.15TNFRSF9'protein_coding'18DELoss-17.810N/ATNFRSF9N/A
2394644.14CSPG2'protein_coding'415DELoss-17.670N/ACSPG2N/A
2404664.14PAPPA'protein_coding'122DELoss-17.634EU ES PAPPA0.00
2414674.14ADAM33'protein_coding'733DELoss-17.610N/AADAM33N/A
2424704.13SPNS1'protein_coding'414AELoss-6.004ES ENST000003522600.00
2434714.13AC008114.25'protein_coding'111DELoss-17.490N/AAC008114.25N/A
2444724.12TAC1'protein_coding'37DELoss-17.440N/ATAC1N/A
2454774.11CYP3A5'protein_coding'214DELoss-17.260N/ACYP3A5N/A
2464794.11C19orf29'protein_coding'214AELoss-5.761ES E2a_E5a0
2474814.10SCARA5'protein_coding'310DELoss-17.200N/ASCARA5N/A
2484824.10SLFN11'protein_coding'311DELoss-17.164EU ES SLFN1166.67
2494834.10GDF10'protein_coding'26DELoss-17.160N/AGDF10N/A
2504844.09ZGPAT'protein_coding'412AELoss-10.641AB E3_Aa0
2514874.09APTX'protein_coding'1122AELoss-9.893EU AB E1_Da0.00