Fusobacterium nucleatum infection is prevalent in human colorectal carcinoma (SRP007584) Castellarin M, Warren RL, Freeman JD, Dreolini L, Krzywinski M, Strauss J, Barnes R, Watson P, Allen-Vercoe E, Moore RA, Holt RA. 2011. Fusobacterium nucleatum infection is prevalent in human colorectal carcinoma. Genome Res. In press. ************ INX034 ************ LIMS RUN ID = 109096 FLOWCELL = 616BEAAXX LANE = 6 SOURCE = NON-TUMOUR, ADJACENT TISSUE CYCLE = 76 ID index sub_library orginal_source upper_protocol lower_protocol taxonomy_id N11 CTTGTA HS1927 RH046 Ribominus RNA Seq SLX-IPET 9606 N10 GGCTAC HS1926 RH045 Ribominus RNA Seq SLX-IPET 9606 N9 TAGCTT HS1925 RH044 Ribominus RNA Seq SLX-IPET 9606 N8 GATCAG HS1924 RH043 Ribominus RNA Seq SLX-IPET 9606 N7 ACTTGA HS1923 RH042 Ribominus RNA Seq SLX-IPET 9606 NA CAGATC HS1922 RH041 Ribominus RNA Seq SLX-IPET 9606 N6 GCCAAT HS1921 RH040 Ribominus RNA Seq SLX-IPET 9606 N5 ACAGTG HS1908 RH039 Ribominus RNA Seq SLX-IPET 9606 N4 TGACCA HS1907 RH038 Ribominus RNA Seq SLX-IPET 9606 N3 TTAGGC HS1906 RH037 Ribominus RNA Seq SLX-IPET 9606 N2 CGATGT HS1905 RH036 Ribominus RNA Seq SLX-IPET 9606 N1 ATCACG HS1904 RH035 Ribominus RNA Seq SLX-IPET 9606 N = Non-Tumour NA = Non available ************ INX035 ************ LIMS RUN ID = 109097 FLOWCELL = 616BEAAXX LANE = 7 SOURCE = CRC TUMOUR CYCLE = 76 ID index sub_library orginal_source upper_protocol lower_protocol taxonomy_id T11 CTTGTA HS1939 RH058 Ribominus RNA Seq SLX-IPET 9606 T10 GGCTAC HS1938 RH057 Ribominus RNA Seq SLX-IPET 9606 T9 TAGCTT HS1937 RH056 Ribominus RNA Seq SLX-IPET 9606 T8 GATCAG HS1936 RH055 Ribominus RNA Seq SLX-IPET 9606 T7 ACTTGA HS1935 RH054 Ribominus RNA Seq SLX-IPET 9606 NA CAGATC HS1934 RH053 Ribominus RNA Seq SLX-IPET 9606 T6 GCCAAT HS1933 RH052 Ribominus RNA Seq SLX-IPET 9606 T5 ACAGTG HS1932 RH051 Ribominus RNA Seq SLX-IPET 9606 T4 TGACCA HS1931 RH050 Ribominus RNA Seq SLX-IPET 9606 T3 TTAGGC HS1930 RH049 Ribominus RNA Seq SLX-IPET 9606 T2 CGATGT HS1929 RH048 Ribominus RNA Seq SLX-IPET 9606 T1 ATCACG HS1928 RH047 Ribominus RNA Seq SLX-IPET 9606 T = Tumor NA = Non available ************ INX160 ************ LIMS RUN ID = 118528 FLOWCELL = 81CMRABXX LANE = 8 SOURCE = Strain CC53F CYCLE = 101 upper_protocol = WGSS (SLX-Genome_Shotgun) lower_protocol = SLX-IPET A04174 200bp fraction (SRX085316) A04175 450bp fraction (SRX085317)