Pairs unsatisfied in distance within a contig. Pair (TTTAATATCTTGTTTTTAGTG - AGGAACCCATACTAAAGTATA) on contig 80 (282893 nt) Astart:268196 Aend:268217 Bstart:282851 Bend:282830 CALCULATED DISTANCE APART: 14655 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#9 -> -468803 <- tig#r.108, A=2687965 nt (start:2234691, end:2234712) B=149705 nt (start:114176, end:114197) CALCULATED DISTANCE APART: -468803 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#3 -> -932962 <- tig#r.90, A=3848698 nt (start:2985185, end:2985206) B=305471 nt (start:216022, end:216043) CALCULATED DISTANCE APART: -932962 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#9 -> -4662782 <- tig#5, A=2687965 nt (start:270277, end:270298) B=3413765 nt (start:2265094, end:2265073) CALCULATED DISTANCE APART: -4662782 < -2000 Pairs unsatisfied in distance within a contig. Pair (TACACATGGTAGTCTAACCGA - CAATTAATTTACAGGCGAAAT) on contig 31 (872282 nt) Astart:620095 Aend:620116 Bstart:634467 Bend:634446 CALCULATED DISTANCE APART: 14372 Pairs unsatisfied in distance within a contig. Pair (AAAACAGTGGTTACTAATGTC - ACGTAAATGGCGTCGTTGATG) on contig 35 (828437 nt) Astart:278011 Aend:278032 Bstart:294527 Bend:294506 CALCULATED DISTANCE APART: 16516 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#24 -> -1981609 <- tig#r.8, A=1160670 nt (start:1089722, end:1089743) B=2829393 nt (start:898732, end:898753) CALCULATED DISTANCE APART: -1981609 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#15 -> -1928257 <- tig#83, A=1925218 nt (start:37541, end:37562) B=262564 nt (start:60580, end:60559) CALCULATED DISTANCE APART: -1928257 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -1261586 <- tig#48, A=2829393 nt (start:1716097, end:1716118) B=1252891 nt (start:168290, end:168269) CALCULATED DISTANCE APART: -1261586 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.5 -> -3252643 <- tig#15, B=3413765 nt (start:1989611, end:1989590) A=1925218 nt (start:1283032, end:1283011) CALCULATED DISTANCE APART: -3252643 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#104 -> -3398521 <- tig#4, A=250374 nt (start:197515, end:197536) B=3700243 nt (start:3365662, end:3365641) CALCULATED DISTANCE APART: -3398521 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATCATCATTAACCTTTTCTTT - AACCGCCACAGTCAAGGTGCT) on contig 10 (2476307 nt) Astart:312194 Aend:312215 Bstart:311531 Bend:311552 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.82 -> -960994 <- tig#10, B=359103 nt (start:110341, end:110320) A=2476307 nt (start:870653, end:870632) CALCULATED DISTANCE APART: -960994 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.4 -> -3629346 <- tig#12, B=3700243 nt (start:3607926, end:3607905) A=4252320 nt (start:41420, end:41399) CALCULATED DISTANCE APART: -3629346 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#527 -> -115686 <- tig#103, A=1721 nt (start:1081, end:1102) B=163531 nt (start:135046, end:135025) CALCULATED DISTANCE APART: -115686 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#42 -> -1065090 <- tig#38, B=702743 nt (start:63148, end:63169) A=738226 nt (start:445495, end:445474) CALCULATED DISTANCE APART: -1065090 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#7 -> -349313 <- tig#42, B=3089900 nt (start:3068900, end:3068921) A=702743 nt (start:348313, end:348292) CALCULATED DISTANCE APART: -349313 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.13 -> -1435157 <- tig#90, B=2095837 nt (start:1245011, end:1244990) A=305471 nt (start:210146, end:210125) CALCULATED DISTANCE APART: -1435157 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#789 -> -1674974 <- tig#15, B=1154 nt (start:248, end:269) A=1925218 nt (start:1694068, end:1694047) CALCULATED DISTANCE APART: -1674974 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.54 -> -119484 <- tig#432, B=495878 nt (start:136895, end:136874) A=2598 nt (start:2589, end:2568) CALCULATED DISTANCE APART: -119484 < -2000 Pairs unsatisfied in distance within a contig. Pair (ACAACAAAGGAAAGAAAAAAA - GAGCAAAAGAAGTGAACAAGC) on contig 66 (365505 nt) Astart:136324 Aend:136345 Bstart:151125 Bend:151104 CALCULATED DISTANCE APART: 14801 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#4 -> -3096526 <- tig#72, B=3700243 nt (start:683617, end:683638) A=488863 nt (start:99900, end:99879) CALCULATED DISTANCE APART: -3096526 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#33 -> -3823407 <- tig#2, B=1401011 nt (start:1216316, end:1216337) A=3889777 nt (start:3658712, end:3658691) CALCULATED DISTANCE APART: -3823407 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.22 -> -1568490 <- tig#35, B=1296783 nt (start:1173860, end:1173839) A=828437 nt (start:414630, end:414609) CALCULATED DISTANCE APART: -1568490 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#3 -> -3838681 <- tig#r.24, A=3848698 nt (start:5391, end:5412) B=1160670 nt (start:1145296, end:1145317) CALCULATED DISTANCE APART: -3838681 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAGTGTGATCGAAATGGTATC - TTTCTTGGGGTATCGTTCTTG) on contig 33 (1401011 nt) Astart:910332 Aend:910353 Bstart:926032 Bend:926011 CALCULATED DISTANCE APART: 15700 Pairs unsatisfied in distance within a contig. Pair (GAAAAAAAGTAACAAAACATA - CCACATCTAACCATGAGAGGA) on contig 37 (792205 nt) Astart:460304 Aend:460283 Bstart:445848 Bend:445869 CALCULATED DISTANCE APART: 14456 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#10 -> -1370812 <- tig#r.11, A=2476307 nt (start:1316506, end:1316527) B=2258275 nt (start:2027264, end:2027285) CALCULATED DISTANCE APART: -1370812 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.199 -> -515440 <- tig#8, B=44760 nt (start:44224, end:44203) A=2829393 nt (start:491216, end:491195) CALCULATED DISTANCE APART: -515440 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -1349344 <- tig#r.72, A=4252320 nt (start:3028135, end:3028156) B=488863 nt (start:343704, end:343725) CALCULATED DISTANCE APART: -1349344 < -2000 Pairs unsatisfied in distance within a contig. Pair (CAACGGCGTATTCGTTTCATA - GCTTCTTCACCACAAGGGATG) on contig 30 (874307 nt) Astart:194845 Aend:194866 Bstart:210766 Bend:210745 CALCULATED DISTANCE APART: 15921 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -1032967 <- tig#164, B=2687965 nt (start:1045788, end:1045767) A=77412 nt (start:7179, end:7158) CALCULATED DISTANCE APART: -1032967 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.13 -> -3021872 <- tig#9, B=2095837 nt (start:730774, end:730753) A=2687965 nt (start:2311098, end:2311077) CALCULATED DISTANCE APART: -3021872 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GCCTTAATTTTGGGTCACTTA - TCTGTTTCTTATTATGTTCTC) on contig 19 (1545896 nt) Astart:390484 Aend:390505 Bstart:401057 Bend:401078 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#10 -> -1066864 <- tig#37, B=2476307 nt (start:1759444, end:1759465) A=792205 nt (start:370001, end:369980) CALCULATED DISTANCE APART: -1066864 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTTTGTTTTGAATTTATTTGG - GTTCATTGCTCTATGTTCGAA) on contig 13 (2095837 nt) Astart:1051347 Aend:1051326 Bstart:1036688 Bend:1036709 CALCULATED DISTANCE APART: 14659 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -359503 <- tig#126, B=2687965 nt (start:252057, end:252036) A=181891 nt (start:127446, end:127425) CALCULATED DISTANCE APART: -359503 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCACAACAAAAATTCAAAGAA - TGCAGTTTCCATTATTATTTG) on contig 8 (2829393 nt) Astart:2028391 Aend:2028370 Bstart:2012485 Bend:2012506 CALCULATED DISTANCE APART: 15906 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#1 -> -3419501 <- tig#83, B=4799971 nt (start:1421055, end:1421076) A=262564 nt (start:60585, end:60564) CALCULATED DISTANCE APART: -3419501 < -2000 Pairs unsatisfied in distance within a contig. Pair (AATTTTATTTTAGTAAGTAGC - TCCACCAGGCACAAGTTCTTC) on contig 73 (318307 nt) Astart:168743 Aend:168722 Bstart:152954 Bend:152975 CALCULATED DISTANCE APART: 15789 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#225 -> -355936 <- tig#r.10, A=33843 nt (start:1968, end:1989) B=2476307 nt (start:2132246, end:2132267) CALCULATED DISTANCE APART: -355936 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -651619 <- tig#47, B=828437 nt (start:639973, end:639994) A=618158 nt (start:483155, end:483134) CALCULATED DISTANCE APART: -651619 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -3335725 <- tig#1, A=2829393 nt (start:1277615, end:1277636) B=4799971 nt (start:1803947, end:1803926) CALCULATED DISTANCE APART: -3335725 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGTGGTTACTAATGTCTTGTT - GAGAAACGTAAATGGCGTCGT) on contig 35 (828437 nt) Astart:278016 Aend:278037 Bstart:294532 Bend:294511 CALCULATED DISTANCE APART: 16516 Pairs unsatisfied in pairing logic within a contig. Pair (CCTGATTTGAACTTTATCATT - CTGCATTGGCATCCACAAGCT) on contig 6 (3988516 nt) Astart:3478085 Aend:3478106 Bstart:3474781 Bend:3474802 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#12 -> -3081142 <- tig#9, A=4252320 nt (start:3720505, end:3720526) B=2687965 nt (start:2569327, end:2569306) CALCULATED DISTANCE APART: -3081142 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CTTTGCGGGTTGAAGGCTATG - CATCGTAGATGGTTCAGCGGC) on contig 150 (91302 nt) Astart:39034 Aend:39013 Bstart:22560 Bend:22539 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#20 -> -1407472 <- tig#30, A=1524840 nt (start:426454, end:426475) B=874307 nt (start:329086, end:329065) CALCULATED DISTANCE APART: -1407472 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#29 -> -222291 <- tig#56, B=906229 nt (start:899825, end:899846) A=468413 nt (start:235887, end:235866) CALCULATED DISTANCE APART: -222291 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.1 -> -4334806 <- tig#4, B=4799971 nt (start:813260, end:813239) A=3700243 nt (start:3541546, end:3541525) CALCULATED DISTANCE APART: -4334806 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCTTAATGGGCTCAAGAAAAG - ACTGTAAAAAGGTATTTTAAA) on contig 12 (4252320 nt) Astart:3689861 Aend:3689840 Bstart:3676183 Bend:3676204 CALCULATED DISTANCE APART: 13678 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -1838101 <- tig#24, B=2829393 nt (start:1081652, end:1081631) A=1160670 nt (start:776449, end:776428) CALCULATED DISTANCE APART: -1838101 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#106 -> -793507 <- tig#r.19, A=156668 nt (start:99057, end:99078) B=1545896 nt (start:790000, end:790021) CALCULATED DISTANCE APART: -793507 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.44 -> -454442 <- tig#49, B=693657 nt (start:27265, end:27244) A=529875 nt (start:447177, end:447156) CALCULATED DISTANCE APART: -454442 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGTTTGGAGAATCTTGTGCTT - TCCTGCCTGCTGATGCTCTAG) on contig 24 (1160670 nt) Astart:65555 Aend:65576 Bstart:66588 Bend:66609 Pairs unsatisfied in pairing logic within a contig. Pair (GGCGGCTGAGATTTTAGGGTT - TTGAAATTATATTTTCATTCC) on contig 45 (672231 nt) Astart:445186 Aend:445165 Bstart:433035 Bend:433014 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#11 -> -2022311 <- tig#24, A=2258275 nt (start:1098489, end:1098510) B=1160670 nt (start:882525, end:882504) CALCULATED DISTANCE APART: -2022311 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#273 -> -105300 <- tig#24, A=18813 nt (start:10112, end:10133) B=1160670 nt (start:116599, end:116578) CALCULATED DISTANCE APART: -105300 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#26 -> -560723 <- tig#93, A=1140087 nt (start:645099, end:645120) B=203845 nt (start:85735, end:85714) CALCULATED DISTANCE APART: -560723 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#106 -> -293700 <- tig#11, A=156668 nt (start:31289, end:31310) B=2258275 nt (start:188321, end:188300) CALCULATED DISTANCE APART: -293700 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.4 -> -2625960 <- tig#27, B=3700243 nt (start:1748672, end:1748651) A=1116231 nt (start:897288, end:897267) CALCULATED DISTANCE APART: -2625960 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TCTGTTGGATCAATGTTACTC - ACATCTGATGCTGATCTTCCT) on contig 24 (1160670 nt) Astart:870048 Aend:870069 Bstart:308901 Bend:308922 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.4 -> -2508817 <- tig#72, B=3700243 nt (start:2428188, end:2428167) A=488863 nt (start:100629, end:100608) CALCULATED DISTANCE APART: -2508817 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#5 -> -2643834 <- tig#442, A=3413765 nt (start:751182, end:751203) B=2459 nt (start:1251, end:1230) CALCULATED DISTANCE APART: -2643834 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -2080036 <- tig#r.62, A=4252320 nt (start:2322622, end:2322643) B=401410 nt (start:231072, end:231093) CALCULATED DISTANCE APART: -2080036 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#88 -> -2997691 <- tig#5, B=242874 nt (start:217910, end:217931) A=3413765 nt (start:2992727, end:2992706) CALCULATED DISTANCE APART: -2997691 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#25 -> -2081299 <- tig#r.8, A=1894032 nt (start:1073650, end:1073671) B=2829393 nt (start:1548476, end:1548497) CALCULATED DISTANCE APART: -2081299 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GACCTCAACGTATTTTACAAT - AAATCCGCCGGAGTTACAGTT) on contig 7 (3089900 nt) Astart:2725470 Aend:2725449 Bstart:2727211 Bend:2727190 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.36 -> -1274592 <- tig#48, B=792826 nt (start:68950, end:68929) A=1252891 nt (start:1225642, end:1225621) CALCULATED DISTANCE APART: -1274592 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAAAAGTGAAGCAGACTTTAG - TGGAATTGTCAAATTGAGGCT) on contig 12 (4252320 nt) Astart:2594088 Aend:2594109 Bstart:2611701 Bend:2611680 CALCULATED DISTANCE APART: 17613 Pairs unsatisfied in distance within a contig. Pair (CATTCGACTGTCTTCAAATGG - CAAAATCATTATTTGCAGGGA) on contig 12 (4252320 nt) Astart:2160543 Aend:2160564 Bstart:2177895 Bend:2177874 CALCULATED DISTANCE APART: 17352 Pairs unsatisfied in pairing logic within a contig. Pair (AAACTTTGACCGGAATATCTC - AGTCCTTTGAAGGACCTACCA) on contig 3 (3848698 nt) Astart:298184 Aend:298205 Bstart:311700 Bend:311721 Pairs unsatisfied in pairing logic within a contig. Pair (TTGTAGCTATTCGCGTAATTT - ACTTGGGGTTCGTGTGAAATC) on contig 2 (3889777 nt) Astart:3363359 Aend:3363338 Bstart:3354656 Bend:3354635 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#17 -> -965151 <- tig#31, B=1742883 nt (start:834049, end:834070) A=872282 nt (start:76317, end:76296) CALCULATED DISTANCE APART: -965151 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTTTCATGAAAATTCGTACAA - ATGGTCATATACAAATGTATA) on contig 22 (1296783 nt) Astart:32361 Aend:32340 Bstart:17062 Bend:17083 CALCULATED DISTANCE APART: 15299 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -2922818 <- tig#2, B=2687965 nt (start:1373272, end:1373293) A=3889777 nt (start:1628125, end:1628104) CALCULATED DISTANCE APART: -2922818 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.75 -> -958614 <- tig#44, B=315030 nt (start:285047, end:285026) A=693657 nt (start:693567, end:693546) CALCULATED DISTANCE APART: -958614 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#6 -> -1048508 <- tig#24, A=3988516 nt (start:2977655, end:2977676) B=1160670 nt (start:57647, end:57626) CALCULATED DISTANCE APART: -1048508 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -593982 <- tig#28, B=2687965 nt (start:2466033, end:2466054) A=916743 nt (start:392050, end:392029) CALCULATED DISTANCE APART: -593982 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.5 -> -787744 <- tig#72, B=3413765 nt (start:707238, end:707217) A=488863 nt (start:100506, end:100485) CALCULATED DISTANCE APART: -787744 < -2000 Pairs unsatisfied in distance within a contig. Pair (AATTCACAAAGATTAGTAATT - GTTGGCAGGTGGGAACGGATA) on contig 23 (1298420 nt) Astart:1005768 Aend:1005747 Bstart:988101 Bend:988122 CALCULATED DISTANCE APART: 17667 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.128 -> -393523 <- tig#38, B=120972 nt (start:28738, end:28717) A=738226 nt (start:384785, end:384764) CALCULATED DISTANCE APART: -393523 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#44 -> -2238372 <- tig#4, A=693657 nt (start:23972, end:23993) B=3700243 nt (start:1588687, end:1588666) CALCULATED DISTANCE APART: -2238372 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TGAGACTAACCAGTTGCAAGA - AATCTTGTGAAGTTAGTTGGG) on contig 4 (3700243 nt) Astart:756549 Aend:756570 Bstart:754671 Bend:754692 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#2 -> -4290986 <- tig#20, A=3889777 nt (start:383213, end:383234) B=1524840 nt (start:804422, end:804401) CALCULATED DISTANCE APART: -4290986 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#43 -> -336993 <- tig#262, B=702740 nt (start:351073, end:351094) A=22415 nt (start:5326, end:5305) CALCULATED DISTANCE APART: -336993 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TACTCAAATGAATGTTTATCA - GCAGGCCAAAAAGGTAACCAC) on contig 5 (3413765 nt) Astart:2634721 Aend:2634700 Bstart:2616476 Bend:2616455 Pairs unsatisfied in distance within a contig. Pair (CTAAAGAATAAGAAGAAAAAT - TATAGATATGAAATAAATAAA) on contig 51 (497268 nt) Astart:71174 Aend:71195 Bstart:85916 Bend:85895 CALCULATED DISTANCE APART: 14742 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#147 -> -4311683 <- tig#1, B=92417 nt (start:48717, end:48738) A=4799971 nt (start:4287983, end:4287962) CALCULATED DISTANCE APART: -4311683 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AAAATCAATCCATTCTGAATA - ACATATCTTTCTGTGCATAAT) on contig 10 (2476307 nt) Astart:1543659 Aend:1543680 Bstart:1546463 Bend:1546484 Pairs unsatisfied in pairing logic within a contig. Pair (ACGTTTACTCCAATCCGGTCC - CACATAGGTCTTTGTTTCTGG) on contig 25 (1894032 nt) Astart:1738831 Aend:1738810 Bstart:1731233 Bend:1731212 Pairs unsatisfied in pairing logic within a contig. Pair (GTATATATAACAAAAGCCAGA - AGAAAAACGAAAAAACCTCCA) on contig 2 (3889777 nt) Astart:2511435 Aend:2511456 Bstart:2526475 Bend:2526496 Pairs unsatisfied in pairing logic within a contig. Pair (TGAAAGCGAAGTTGGATCCGT - GTCGTTGATTTGGTTTGCTAC) on contig 16 (1744109 nt) Astart:1671958 Aend:1671937 Bstart:1670891 Bend:1670870 Pairs unsatisfied in distance within a contig. Pair (TTTCTTCTACGAAACGTAGTT - ATGTGTTAAGCATGGTGTTAC) on contig 65 (411873 nt) Astart:17466 Aend:17487 Bstart:34916 Bend:34895 CALCULATED DISTANCE APART: 17450 Pairs unsatisfied in pairing logic within a contig. Pair (ATGTTATATTTTTCTCTAAAT - TTCAACGGACTTAAGTCCTCC) on contig 9 (2687965 nt) Astart:1146427 Aend:1146448 Bstart:1150962 Bend:1150983 Pairs unsatisfied in pairing logic within a contig. Pair (AACTCCATCAAACCAATATAA - TGAATTTCTCGATTCGTCTCT) on contig 16 (1744109 nt) Astart:1070984 Aend:1071005 Bstart:1075293 Bend:1075314 Pairs unsatisfied in distance within a contig. Pair (TTTACTGATTTCAATGTTTTT - TTGCCTCCCAACACTAGTACC) on contig 63 (393958 nt) Astart:15895 Aend:15916 Bstart:24747 Bend:24726 CALCULATED DISTANCE APART: 8852 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.37 -> -3129112 <- tig#9, B=792205 nt (start:689237, end:689216) A=2687965 nt (start:2459875, end:2459854) CALCULATED DISTANCE APART: -3129112 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATTATGGATAAAAGAAAGAGT - GAATAGGAATGGTTTAAAGAA) on contig 57 (453946 nt) Astart:122178 Aend:122157 Bstart:123049 Bend:123028 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#154 -> -883419 <- tig#34, A=84292 nt (start:8673, end:8694) B=868147 nt (start:827800, end:827779) CALCULATED DISTANCE APART: -883419 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#4 -> -2203850 <- tig#41, A=3700243 nt (start:1868642, end:1868663) B=710158 nt (start:392249, end:392228) CALCULATED DISTANCE APART: -2203850 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CCCTTTTGGGCATCTGATCAA - TCTCGAGTAAGTGTAGAGATT) on contig 25 (1894032 nt) Astart:83164 Aend:83185 Bstart:86128 Bend:86149 Pairs unsatisfied in pairing logic within a contig. Pair (TTGTGCTGCGTTTTTATCGAA - CTTACACTTTTTAGTCACAAG) on contig 49 (529875 nt) Astart:383579 Aend:383600 Bstart:397154 Bend:397175 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#43 -> -511599 <- tig#93, A=702740 nt (start:271648, end:271669) B=203845 nt (start:100507, end:100486) CALCULATED DISTANCE APART: -511599 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTCTACATGCTCAGCTAGCTT - GCAAAGTATTGTCCTTTTTTT) on contig 8 (2829393 nt) Astart:1583751 Aend:1583730 Bstart:1567468 Bend:1567447 Pairs unsatisfied in distance within a contig. Pair (ATTTTTATTGGTTGTTTTCTT - TGAAACTTTCCCATTGTCTCT) on contig 13 (2095837 nt) Astart:1810281 Aend:1810302 Bstart:1827102 Bend:1827081 CALCULATED DISTANCE APART: 16821 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.1 -> -5238391 <- tig#40, B=4799971 nt (start:4713688, end:4713667) A=717909 nt (start:544703, end:544682) CALCULATED DISTANCE APART: -5238391 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAAAAGAAAAAAAGTAACAAA - TCTAACCATGAGAGGAGCAAT) on contig 37 (792205 nt) Astart:460309 Aend:460288 Bstart:445853 Bend:445874 CALCULATED DISTANCE APART: 14456 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#7 -> -2858429 <- tig#55, A=3089900 nt (start:520331, end:520352) B=473235 nt (start:308860, end:308839) CALCULATED DISTANCE APART: -2858429 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAATTTCTGTTAAATCAAACG - CAGGACATGACTCTTGCTGTA) on contig 6 (3988516 nt) Astart:1140623 Aend:1140602 Bstart:1132597 Bend:1132618 CALCULATED DISTANCE APART: 8026 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#12 -> -2188742 <- tig#15, A=4252320 nt (start:3655656, end:3655677) B=1925218 nt (start:1612078, end:1612057) CALCULATED DISTANCE APART: -2188742 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTTCTTATAAAAAAAATGCAG - AAAAAAAAAAAAAAAGTGGGG) on contig 33 (1401011 nt) Astart:1251357 Aend:1251378 Bstart:132020 Bend:132041 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#6 -> -3694897 <- tig#r.50, A=3988516 nt (start:495726, end:495747) B=498313 nt (start:276206, end:276227) CALCULATED DISTANCE APART: -3694897 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#90 -> -1389572 <- tig#9, B=305471 nt (start:141796, end:141817) A=2687965 nt (start:1245897, end:1245876) CALCULATED DISTANCE APART: -1389572 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#83 -> -273165 <- tig#6, A=262564 nt (start:157524, end:157545) B=3988516 nt (start:188125, end:188104) CALCULATED DISTANCE APART: -273165 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGTGATCACATCTAATCCATC - AATTATTTGAAGCATGGTTTG) on contig 11 (2258275 nt) Astart:1009463 Aend:1009484 Bstart:1026891 Bend:1026912 Pairs unsatisfied in distance within a contig. Pair (AATACGAGGATTGGGGCTAAC - CCATTCAGCCTGAAATGAGCA) on contig 17 (1742883 nt) Astart:1705855 Aend:1705834 Bstart:1688601 Bend:1688622 CALCULATED DISTANCE APART: 17254 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#1 -> -3905203 <- tig#23, B=4799971 nt (start:1215832, end:1215853) A=1298420 nt (start:341064, end:341043) CALCULATED DISTANCE APART: -3905203 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CTCAACTACATCAGCTTTCGT - CGTTTTTTTCTCCTCTTTCTG) on contig 6 (3988516 nt) Astart:1955322 Aend:1955343 Bstart:1980255 Bend:1980276 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#3 -> -938848 <- tig#6, B=3848698 nt (start:3127663, end:3127684) A=3988516 nt (start:237813, end:237792) CALCULATED DISTANCE APART: -938848 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TCTTCGACCTCAACGTATTTT - CGCCGGAGTTACAGTTACAAG) on contig 7 (3089900 nt) Astart:2725475 Aend:2725454 Bstart:2727206 Bend:2727185 Pairs unsatisfied in pairing logic within a contig. Pair (GAGATGTTTCAAGTATCAATA - CAACTAAATTCACTATATACA) on contig 13 (2095837 nt) Astart:1421745 Aend:1421724 Bstart:1420353 Bend:1420332 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#83 -> -1226651 <- tig#r.9, A=262564 nt (start:159035, end:159056) B=2687965 nt (start:1544843, end:1544864) CALCULATED DISTANCE APART: -1226651 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CAGAAACATTTTAAGTAAATC - CAGTCATCCAGGTCAAGATGA) on contig 25 (1894032 nt) Astart:1735001 Aend:1734980 Bstart:1735054 Bend:1735033 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.82 -> -100655 <- tig#673, B=359103 nt (start:119389, end:119368) A=1334 nt (start:1266, end:1245) CALCULATED DISTANCE APART: -100655 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.1 -> -5578536 <- tig#2, B=4799971 nt (start:2475009, end:2474988) A=3889777 nt (start:3123527, end:3123506) CALCULATED DISTANCE APART: -5578536 < -2000 Pairs unsatisfied in distance within a contig. Pair (GAATGTGTTGCTTAGCTTAGC - AGTCTCAAGTCTGTTACTCAA) on contig 28 (916743 nt) Astart:470097 Aend:470076 Bstart:456776 Bend:456797 CALCULATED DISTANCE APART: 13321 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#103 -> -99961 <- tig#r.55, A=163531 nt (start:135026, end:135047) B=473235 nt (start:381779, end:381800) CALCULATED DISTANCE APART: -99961 < -2000 Pairs unsatisfied in distance within a contig. Pair (CATACCTTAAAAGATTTTGTA - CTCAAGTTTAGTGGAGCTCCC) on contig 143 (102236 nt) Astart:6606 Aend:6585 Bstart:1099 Bend:1120 CALCULATED DISTANCE APART: 5507 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#20 -> -3601028 <- tig#4, A=1524840 nt (start:135861, end:135882) B=3700243 nt (start:2232049, end:2232028) CALCULATED DISTANCE APART: -3601028 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#12 -> -1625148 <- tig#143, B=4252320 nt (start:2669347, end:2669368) A=102236 nt (start:62175, end:62154) CALCULATED DISTANCE APART: -1625148 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GCTTTTCGAATTCAATCAAAG - ATGGAAATACCTACGGATATG) on contig 8 (2829393 nt) Astart:1585323 Aend:1585302 Bstart:1565879 Bend:1565858 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#3 -> -3524858 <- tig#51, A=3848698 nt (start:324430, end:324451) B=497268 nt (start:20590, end:20569) CALCULATED DISTANCE APART: -3524858 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ACTTTTTTTAACCAAAAAATC - TATCCATGTTGAATCACTTGA) on contig 24 (1160670 nt) Astart:869156 Aend:869177 Bstart:309742 Bend:309763 Pairs unsatisfied in distance within a contig. Pair (AATAAAACATCTTTAAGTACT - TTCTCTTTCTCTAATGTCAAA) on contig 52 (490129 nt) Astart:351164 Aend:351143 Bstart:336418 Bend:336439 CALCULATED DISTANCE APART: 14746 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#14 -> -591666 <- tig#9, B=2017548 nt (start:1843886, end:1843907) A=2687965 nt (start:438004, end:437983) CALCULATED DISTANCE APART: -591666 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATTGGCAGCTCCGATGCCGCC - GGGTAAGAATAATGAAAATAT) on contig 150 (91302 nt) Astart:37359 Aend:37338 Bstart:36907 Bend:36886 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.24 -> -967921 <- tig#32, B=1160670 nt (start:853926, end:853905) A=1165067 nt (start:133995, end:133974) CALCULATED DISTANCE APART: -967921 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.4 -> -4703171 <- tig#14, B=3700243 nt (start:3061011, end:3060990) A=2017548 nt (start:1662160, end:1662139) CALCULATED DISTANCE APART: -4703171 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.76 -> -187924 <- tig#82, B=309514 nt (start:97303, end:97282) A=359103 nt (start:110621, end:110600) CALCULATED DISTANCE APART: -187924 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATAGGTTTGTGCACATGCAAT - CGAGGAAAATAATGTTATTTA) on contig 13 (2095837 nt) Astart:871790 Aend:871811 Bstart:886828 Bend:886807 CALCULATED DISTANCE APART: 15038 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.4 -> -2793331 <- tig#31, B=3700243 nt (start:2565057, end:2565036) A=872282 nt (start:248274, end:248253) CALCULATED DISTANCE APART: -2793331 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#116 -> -590410 <- tig#2, B=139567 nt (start:24172, end:24193) A=3889777 nt (start:495015, end:494994) CALCULATED DISTANCE APART: -590410 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#180 -> -17732 <- tig#228, B=60700 nt (start:38318, end:38339) A=56381 nt (start:15350, end:15329) CALCULATED DISTANCE APART: -17732 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ACATTTTAAGTAAATCTAGCA - GGAGTCAGTCATCCAGGTCAA) on contig 25 (1894032 nt) Astart:1734996 Aend:1734975 Bstart:1735059 Bend:1735038 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#5 -> -5201571 <- tig#r.12, A=3413765 nt (start:466996, end:467017) B=4252320 nt (start:1977518, end:1977539) CALCULATED DISTANCE APART: -5201571 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ACAATGTGTCTCTGTTGCAAA - ACAAGCGTTAAGCACCGCATT) on contig 25 (1894032 nt) Astart:1736874 Aend:1736853 Bstart:1733161 Bend:1733140 Pairs unsatisfied in pairing logic within a contig. Pair (TGGGTAAAAAGTTTCATTACA - TGTAGTATGTTTAAGATAATT) on contig 2 (3889777 nt) Astart:3289276 Aend:3289255 Bstart:3282056 Bend:3282035 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#7 -> -3787950 <- tig#r.25, A=3089900 nt (start:521359, end:521380) B=1894032 nt (start:654623, end:654644) CALCULATED DISTANCE APART: -3787950 < -2000 Pairs unsatisfied in distance within a contig. Pair (TATAGAATGAACAGTTTATAT - ATTGCTTTAAAGAGGTCATGT) on contig 181 (60104 nt) Astart:26140 Aend:26119 Bstart:11557 Bend:11578 CALCULATED DISTANCE APART: 14583 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.21 -> -1248815 <- tig#7, B=1453855 nt (start:499189, end:499168) A=3089900 nt (start:769626, end:769605) CALCULATED DISTANCE APART: -1248815 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#187 -> -259205 <- tig#9, B=77427 nt (start:36092, end:36113) A=2687965 nt (start:237870, end:237849) CALCULATED DISTANCE APART: -259205 < -2000 Pairs unsatisfied in distance within a contig. Pair (GCTCAATTTTTTTTATGTCAA - CTGAGGCAATTGCTGCGAATA) on contig 14 (2017548 nt) Astart:844191 Aend:844170 Bstart:826249 Bend:826270 CALCULATED DISTANCE APART: 17942 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#104 -> -634157 <- tig#r.36, A=250374 nt (start:197629, end:197650) B=792826 nt (start:191414, end:191435) CALCULATED DISTANCE APART: -634157 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.12 -> -5096088 <- tig#13, B=4252320 nt (start:3370917, end:3370896) A=2095837 nt (start:1745171, end:1745150) CALCULATED DISTANCE APART: -5096088 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGTTTCATGATGATTCCCCGC - GTACGCTTTCTGCCTTTATAT) on contig 41 (710158 nt) Astart:677172 Aend:677151 Bstart:665752 Bend:665773 CALCULATED DISTANCE APART: 11420 Pairs unsatisfied in distance within a contig. Pair (GGCGAAACTAATCATAACATC - ACTCCATCTGACGTAAGATAT) on contig 34 (868147 nt) Astart:867184 Aend:867163 Bstart:850920 Bend:850941 CALCULATED DISTANCE APART: 16264 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#44 -> -650766 <- tig#r.147, A=693657 nt (start:24135, end:24156) B=92417 nt (start:91173, end:91194) CALCULATED DISTANCE APART: -650766 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAAAAAAAATGAAACTGAATT - TTTCTCAGGCGATCAGTTCCG) on contig 4 (3700243 nt) Astart:3604466 Aend:3604487 Bstart:3620988 Bend:3620967 CALCULATED DISTANCE APART: 16522 Pairs unsatisfied in distance within a contig. Pair (ACGAATTAGAGATACGGCAAC - ATTTCATAAACACTATGTGGC) on contig 22 (1296783 nt) Astart:476723 Aend:476744 Bstart:491642 Bend:491621 CALCULATED DISTANCE APART: 14919 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#2 -> -3626557 <- tig#107, A=3889777 nt (start:293417, end:293438) B=151872 nt (start:50197, end:50176) CALCULATED DISTANCE APART: -3626557 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.13 -> -3411607 <- tig#9, B=2095837 nt (start:1230938, end:1230917) A=2687965 nt (start:2200669, end:2200648) CALCULATED DISTANCE APART: -3411607 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#91 -> -1209340 <- tig#22, B=214867 nt (start:103625, end:103646) A=1296783 nt (start:1118098, end:1118077) CALCULATED DISTANCE APART: -1209340 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#111 -> -129265 <- tig#r.198, A=143121 nt (start:20853, end:20874) B=67112 nt (start:40115, end:40136) CALCULATED DISTANCE APART: -129265 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.10 -> -2007422 <- tig#47, B=2476307 nt (start:1493131, end:1493110) A=618158 nt (start:534291, end:534270) CALCULATED DISTANCE APART: -2007422 < -2000 Pairs unsatisfied in distance within a contig. Pair (GTTCCTAGAGATATGATAAAT - TACCCTTCTGATGAAGAATGG) on contig 4 (3700243 nt) Astart:3604053 Aend:3604074 Bstart:3620566 Bend:3620545 CALCULATED DISTANCE APART: 16513 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#10 -> -1370812 <- tig#r.11, A=2476307 nt (start:1316501, end:1316522) B=2258275 nt (start:2027269, end:2027290) CALCULATED DISTANCE APART: -1370812 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TGAAACTCTTAACCACAATCA - CAGAAGAAGGTAAGCTGTCAA) on contig 7 (3089900 nt) Astart:329545 Aend:329524 Bstart:330461 Bend:330440 Pairs unsatisfied in pairing logic within a contig. Pair (GATGGAGGTTTTAACTTTCAC - CGGCCAAGTTTTTTCCAGAAT) on contig 25 (1894032 nt) Astart:103793 Aend:103772 Bstart:102039 Bend:102018 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#12 -> -1625025 <- tig#17, A=4252320 nt (start:3391183, end:3391204) B=1742883 nt (start:783888, end:783867) CALCULATED DISTANCE APART: -1625025 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGCGAGTGACTATTTCTCCTA - CTCTGAGAACTCGTAAGAATC) on contig 1 (4799971 nt) Astart:4091360 Aend:4091381 Bstart:4105615 Bend:4105594 CALCULATED DISTANCE APART: 14255 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#9 -> -133657 <- tig#r.24, A=2687965 nt (start:2661008, end:2661029) B=1160670 nt (start:1033970, end:1033991) CALCULATED DISTANCE APART: -133657 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATGGCTTTGTTAATAATGTAG - GAGAAGGCCTAAGAAGAAGAA) on contig 5 (3413765 nt) Astart:2268688 Aend:2268709 Bstart:2286540 Bend:2286519 CALCULATED DISTANCE APART: 17852 Pairs unsatisfied in pairing logic within a contig. Pair (TGGCTACCCTTCGTTTGATCT - TCTCTCTCTGCCTGTTGTGTA) on contig 12 (4252320 nt) Astart:741764 Aend:741743 Bstart:736449 Bend:736428 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.26 -> -841504 <- tig#11, B=1140087 nt (start:744833, end:744812) A=2258275 nt (start:116671, end:116650) CALCULATED DISTANCE APART: -841504 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#12 -> -2656123 <- tig#107, B=4252320 nt (start:1721291, end:1721312) A=151872 nt (start:145094, end:145073) CALCULATED DISTANCE APART: -2656123 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#92 -> -1138453 <- tig#48, A=204193 nt (start:101126, end:101147) B=1252891 nt (start:1055386, end:1055365) CALCULATED DISTANCE APART: -1138453 < -2000 Pairs unsatisfied in distance within a contig. Pair (CCGAGATTAAAGTCACAATGT - ATTAATCGAAATTATAAATAT) on contig 1 (4799971 nt) Astart:3549312 Aend:3549291 Bstart:3534214 Bend:3534235 CALCULATED DISTANCE APART: 15098 Pairs unsatisfied in distance within a contig. Pair (TCTCTGAAAGTCTCCAACTTT - GTAGTAATCATGTTTACCACA) on contig 152 (85348 nt) Astart:81861 Aend:81840 Bstart:65818 Bend:65839 CALCULATED DISTANCE APART: 16043 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -2767203 <- tig#23, B=2829393 nt (start:2762053, end:2762032) A=1298420 nt (start:25150, end:25129) CALCULATED DISTANCE APART: -2767203 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.18 -> -420949 <- tig#251, B=1637738 nt (start:416869, end:416848) A=24231 nt (start:24080, end:24059) CALCULATED DISTANCE APART: -420949 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#16 -> -2476843 <- tig#1, B=1744109 nt (start:933606, end:933627) A=4799971 nt (start:1686340, end:1686319) CALCULATED DISTANCE APART: -2476843 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATTTGTAGTTCCAAATAAGCG - ACTTCTACTAGCGTCAAACTG) on contig 12 (4252320 nt) Astart:867246 Aend:867225 Bstart:855532 Bend:855553 CALCULATED DISTANCE APART: 11714 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#9 -> -2223360 <- tig#112, A=2687965 nt (start:556408, end:556429) B=142199 nt (start:111803, end:111782) CALCULATED DISTANCE APART: -2223360 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.37 -> -771510 <- tig#7, B=792205 nt (start:153280, end:153259) A=3089900 nt (start:638230, end:638209) CALCULATED DISTANCE APART: -771510 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#24 -> -849313 <- tig#356, B=1160670 nt (start:292057, end:292078) A=6713 nt (start:700, end:679) CALCULATED DISTANCE APART: -849313 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#73 -> -164535 <- tig#23, B=318307 nt (start:159426, end:159447) A=1298420 nt (start:25654, end:25633) CALCULATED DISTANCE APART: -164535 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#62 -> -706548 <- tig#56, A=401410 nt (start:24208, end:24229) B=468413 nt (start:349346, end:349325) CALCULATED DISTANCE APART: -706548 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGAACGTTGGTACACATTTTG - AACTGACCAAAACAAAGAACA) on contig 49 (529875 nt) Astart:384468 Aend:384489 Bstart:396280 Bend:396301 Pairs unsatisfied in pairing logic within a contig. Pair (AACATTAACAGAAAGTTAAAA - ATTGTTACGACAATGCCAAAA) on contig 57 (453946 nt) Astart:125669 Aend:125648 Bstart:119694 Bend:119673 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#24 -> -312248 <- tig#105, B=1160670 nt (start:973770, end:973791) A=159552 nt (start:145348, end:145327) CALCULATED DISTANCE APART: -312248 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTTCACATTTTTGACGTTGCA - TTCTCTCTCTCTCTTCTCCTA) on contig 20 (1524840 nt) Astart:1083613 Aend:1083592 Bstart:1079979 Bend:1079958 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#92 -> -234677 <- tig#49, A=204193 nt (start:52936, end:52957) B=529875 nt (start:103420, end:103399) CALCULATED DISTANCE APART: -234677 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTTCAGCCTTTTAAAGAATAA - GACAAGATTGTGGACGACCGC) on contig 9 (2687965 nt) Astart:1644146 Aend:1644125 Bstart:1629571 Bend:1629592 CALCULATED DISTANCE APART: 14575 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#73 -> -1923608 <- tig#r.10, A=318307 nt (start:189776, end:189797) B=2476307 nt (start:661230, end:661251) CALCULATED DISTANCE APART: -1923608 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#21 -> -2384491 <- tig#r.16, A=1453855 nt (start:452989, end:453010) B=1744109 nt (start:340484, end:340505) CALCULATED DISTANCE APART: -2384491 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#52 -> -135792 <- tig#r.87, A=490129 nt (start:356628, end:356649) B=244107 nt (start:221816, end:221837) CALCULATED DISTANCE APART: -135792 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AACAGTGATTTTAGCGTCTAT - ACATTTCCTTTTGAGACCATA) on contig 7 (3089900 nt) Astart:2727279 Aend:2727258 Bstart:2725281 Bend:2725260 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -3254867 <- tig#3, B=2258275 nt (start:349393, end:349372) A=3848698 nt (start:2925474, end:2925453) CALCULATED DISTANCE APART: -3254867 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#1 -> -3255164 <- tig#29, A=4799971 nt (start:2240407, end:2240428) B=906229 nt (start:715600, end:715579) CALCULATED DISTANCE APART: -3255164 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#9 -> -3337912 <- tig#r.18, A=2687965 nt (start:416841, end:416862) B=1637738 nt (start:550950, end:550971) CALCULATED DISTANCE APART: -3337912 < -2000 Pairs unsatisfied in distance within a contig. Pair (TAATGTTAATTATTTTAATCA - TACAACAAGATGATCTACTTG) on contig 48 (1252891 nt) Astart:304340 Aend:304319 Bstart:286502 Bend:286523 CALCULATED DISTANCE APART: 17838 Pairs unsatisfied in distance within a contig. Pair (TTTAATCTACATAATATTTTT - ATCGTAAGCGTAGCTGTAAGC) on contig 12 (4252320 nt) Astart:1981579 Aend:1981558 Bstart:1965680 Bend:1965701 CALCULATED DISTANCE APART: 15899 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#16 -> -2559407 <- tig#8, A=1744109 nt (start:1439445, end:1439466) B=2829393 nt (start:2274743, end:2274722) CALCULATED DISTANCE APART: -2559407 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.77 -> -640849 <- tig#33, B=306905 nt (start:51819, end:51798) A=1401011 nt (start:609030, end:609009) CALCULATED DISTANCE APART: -640849 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AACCACAATCAATTTGAATAT - GAGAATGACCCAGAAGAAGGT) on contig 7 (3089900 nt) Astart:329535 Aend:329514 Bstart:330471 Bend:330450 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.74 -> -2083742 <- tig#3, B=317083 nt (start:77344, end:77323) A=3848698 nt (start:2026398, end:2026377) CALCULATED DISTANCE APART: -2083742 < -2000 Pairs unsatisfied in distance within a contig. Pair (GTTTCCTGCTACTTCCAAGGC - GTGGTTTCGATAAGGATTTTG) on contig 13 (2095837 nt) Astart:1601569 Aend:1601548 Bstart:1588106 Bend:1588127 CALCULATED DISTANCE APART: 13463 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#46 -> -1533739 <- tig#r.1, A=658085 nt (start:209693, end:209714) B=4799971 nt (start:3694624, end:3694645) CALCULATED DISTANCE APART: -1533739 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -2637906 <- tig#38, B=2687965 nt (start:414839, end:414860) A=738226 nt (start:384780, end:384759) CALCULATED DISTANCE APART: -2637906 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#30 -> -2022679 <- tig#1, B=874307 nt (start:477327, end:477348) A=4799971 nt (start:1645699, end:1645678) CALCULATED DISTANCE APART: -2022679 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#15 -> -765531 <- tig#24, A=1925218 nt (start:1691668, end:1691689) B=1160670 nt (start:551981, end:551960) CALCULATED DISTANCE APART: -765531 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -729826 <- tig#r.19, A=2095837 nt (start:1455280, end:1455301) B=1545896 nt (start:1436627, end:1436648) CALCULATED DISTANCE APART: -729826 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATCCTAAGATATCAAAACTAA - TAGCTTTTACTGATTTCTATT) on contig 78 (303746 nt) Astart:39871 Aend:39892 Bstart:42044 Bend:42065 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.12 -> -992463 <- tig#150, B=4252320 nt (start:1003314, end:1003293) A=91302 nt (start:9149, end:9128) CALCULATED DISTANCE APART: -992463 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.21 -> -1472158 <- tig#15, B=1453855 nt (start:768490, end:768469) A=1925218 nt (start:723668, end:723647) CALCULATED DISTANCE APART: -1472158 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.37 -> -688395 <- tig#14, B=792205 nt (start:266560, end:266539) A=2017548 nt (start:441835, end:441814) CALCULATED DISTANCE APART: -688395 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#21 -> -1887738 <- tig#28, A=1453855 nt (start:98929, end:98950) B=916743 nt (start:552812, end:552791) CALCULATED DISTANCE APART: -1887738 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -999058 <- tig#r.47, A=4252320 nt (start:3655760, end:3655781) B=618158 nt (start:195660, end:195681) CALCULATED DISTANCE APART: -999058 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.40 -> -3293823 <- tig#9, B=717909 nt (start:657846, end:657825) A=2687965 nt (start:2655977, end:2655956) CALCULATED DISTANCE APART: -3293823 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GACGGAGCTTCGATTTCTTGA - TGGTTCCATAAAAAGAATCCT) on contig 3 (3848698 nt) Astart:145622 Aend:145643 Bstart:149883 Bend:149904 Pairs unsatisfied in pairing logic within a contig. Pair (GAGGAGACGTAATGAGCCAAA - AGAAACAATAACACATTTGTG) on contig 12 (4252320 nt) Astart:741182 Aend:741161 Bstart:737047 Bend:737026 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#5 -> -5184965 <- tig#12, A=3413765 nt (start:291377, end:291398) B=4252320 nt (start:2082577, end:2082556) CALCULATED DISTANCE APART: -5184965 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.608 -> -68056 <- tig#127, B=1454 nt (start:1240, end:1219) A=121075 nt (start:86816, end:86795) CALCULATED DISTANCE APART: -68056 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#4 -> -328580 <- tig#13, A=3700243 nt (start:3484013, end:3484034) B=2095837 nt (start:132350, end:132329) CALCULATED DISTANCE APART: -328580 < -2000 Pairs unsatisfied in distance within a contig. Pair (GTTAACTGGATCATTTCAGAC - ATGAAAAGCAACAGGTATCAT) on contig 6 (3988516 nt) Astart:1140685 Aend:1140664 Bstart:1132658 Bend:1132679 CALCULATED DISTANCE APART: 8027 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.13 -> -2116859 <- tig#64, B=2095837 nt (start:1763714, end:1763693) A=462404 nt (start:373145, end:373124) CALCULATED DISTANCE APART: -2116859 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCAGGGAAAAACATCCAAGGG - TTCAAGACGAGGTCCCCGTGC) on contig 57 (453946 nt) Astart:135493 Aend:135514 Bstart:151105 Bend:151084 CALCULATED DISTANCE APART: 15612 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#160 -> -1571313 <- tig#r.2, A=80343 nt (start:69104, end:69125) B=3889777 nt (start:2309703, end:2309724) CALCULATED DISTANCE APART: -1571313 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#4 -> -504839 <- tig#14, B=3700243 nt (start:3446089, end:3446110) A=2017548 nt (start:270685, end:270664) CALCULATED DISTANCE APART: -504839 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTACAGCTGCTGCTCATGCTC - TGCTCCTCTTCTTTTAGTTCA) on contig 3 (3848698 nt) Astart:1310971 Aend:1310950 Bstart:1295017 Bend:1295038 CALCULATED DISTANCE APART: 15954 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#62 -> -706548 <- tig#56, A=401410 nt (start:24213, end:24234) B=468413 nt (start:349351, end:349330) CALCULATED DISTANCE APART: -706548 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#13 -> -1720137 <- tig#43, B=2095837 nt (start:942813, end:942834) A=702740 nt (start:587113, end:587092) CALCULATED DISTANCE APART: -1720137 < -2000 Pairs unsatisfied in distance within a contig. Pair (TAAATTTATTTCTAACATTAT - GTAAACCCTGTTTTTCAAAAA) on contig 144 (102078 nt) Astart:18306 Aend:18285 Bstart:1503 Bend:1524 CALCULATED DISTANCE APART: 16803 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#17 -> -735442 <- tig#490, A=1742883 nt (start:988225, end:988246) B=1880 nt (start:784, end:763) CALCULATED DISTANCE APART: -735442 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.7 -> -2670745 <- tig#119, B=3089900 nt (start:2615160, end:2615139) A=136757 nt (start:75585, end:75564) CALCULATED DISTANCE APART: -2670745 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#95 -> -331843 <- tig#r.2, A=191240 nt (start:69420, end:69441) B=3889777 nt (start:3659754, end:3659775) CALCULATED DISTANCE APART: -331843 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#25 -> -1505719 <- tig#r.110, A=1894032 nt (start:483422, end:483443) B=143917 nt (start:28808, end:28829) CALCULATED DISTANCE APART: -1505719 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#185 -> -1760453 <- tig#8, B=52434 nt (start:17202, end:17223) A=2829393 nt (start:1745221, end:1745200) CALCULATED DISTANCE APART: -1760453 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.19 -> -1167222 <- tig#24, B=1545896 nt (start:584417, end:584396) A=1160670 nt (start:602805, end:602784) CALCULATED DISTANCE APART: -1167222 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.1 -> -5359994 <- tig#18, B=4799971 nt (start:3877074, end:3877053) A=1637738 nt (start:1502920, end:1502899) CALCULATED DISTANCE APART: -5359994 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AACTCTAGTTACATTTTTTCC - TTTTCGAATCCTCACATTGCG) on contig 24 (1160670 nt) Astart:868937 Aend:868958 Bstart:309936 Bend:309957 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -585423 <- tig#49, B=916743 nt (start:583998, end:584019) A=529875 nt (start:272678, end:272657) CALCULATED DISTANCE APART: -585423 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.25 -> -2353772 <- tig#2, B=1894032 nt (start:1769321, end:1769300) A=3889777 nt (start:604451, end:604430) CALCULATED DISTANCE APART: -2353772 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GGTGAGGAGAATCAAAATGGA - TTTATCACCAAACACAAGATT) on contig 7 (3089900 nt) Astart:1294892 Aend:1294871 Bstart:1299373 Bend:1299352 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#8 -> -2947491 <- tig#r.17, A=2829393 nt (start:375677, end:375698) B=1742883 nt (start:1229108, end:1229129) CALCULATED DISTANCE APART: -2947491 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#3 -> -4941374 <- tig#6, B=3848698 nt (start:359693, end:359714) A=3988516 nt (start:1472369, end:1472348) CALCULATED DISTANCE APART: -4941374 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#15 -> -1168730 <- tig#83, B=1925218 nt (start:882832, end:882853) A=262564 nt (start:146344, end:146323) CALCULATED DISTANCE APART: -1168730 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#5 -> -2842915 <- tig#r.8, A=3413765 nt (start:2946454, end:2946475) B=2829393 nt (start:433789, end:433810) CALCULATED DISTANCE APART: -2842915 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#20 -> -296822 <- tig#79, B=1524840 nt (start:1383237, end:1383258) A=300950 nt (start:175219, end:175198) CALCULATED DISTANCE APART: -296822 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.1 -> -2812442 <- tig#68, B=4799971 nt (start:2600708, end:2600687) A=360191 nt (start:231734, end:231713) CALCULATED DISTANCE APART: -2812442 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#15 -> -1800415 <- tig#13, A=1925218 nt (start:1073252, end:1073273) B=2095837 nt (start:968449, end:968428) CALCULATED DISTANCE APART: -1800415 < -2000 Pairs unsatisfied in distance within a contig. Pair (TAATGGTTATTTGCATCTATT - TTCCACTTGGGCTCTTTCTCT) on contig 31 (872282 nt) Astart:620832 Aend:620853 Bstart:635214 Bend:635193 CALCULATED DISTANCE APART: 14382 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.13 -> -3574675 <- tig#5, B=2095837 nt (start:1067026, end:1067005) A=3413765 nt (start:2527649, end:2527628) CALCULATED DISTANCE APART: -3574675 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#22 -> -1500536 <- tig#51, A=1296783 nt (start:173551, end:173572) B=497268 nt (start:397304, end:397283) CALCULATED DISTANCE APART: -1500536 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#42 -> -738534 <- tig#r.15, A=702743 nt (start:429532, end:429553) B=1925218 nt (start:1439895, end:1439916) CALCULATED DISTANCE APART: -738534 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TCAATTCTTGTTAATTGTTCT - TTCTATAGAGAGCGAGAGCTA) on contig 1 (4799971 nt) Astart:326502 Aend:326523 Bstart:339152 Bend:339173 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#106 -> -177657 <- tig#177, A=156668 nt (start:29742, end:29763) B=74766 nt (start:70731, end:70710) CALCULATED DISTANCE APART: -177657 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGCAAGGTGCTTTAGTTTATG - GGGCTTCTCAACAAGCTTCCA) on contig 13 (2095837 nt) Astart:1420620 Aend:1420599 Bstart:1421568 Bend:1421547 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#46 -> -2971141 <- tig#12, A=658085 nt (start:209203, end:209224) B=4252320 nt (start:2542259, end:2542238) CALCULATED DISTANCE APART: -2971141 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTATGCAACGGCGTATTCGTT - TTCACCACAAGGGATGGCATG) on contig 30 (874307 nt) Astart:194840 Aend:194861 Bstart:210761 Bend:210740 CALCULATED DISTANCE APART: 15921 Pairs unsatisfied in distance within a contig. Pair (ATCTGAAATTGAAGATATTTC - TATAAATAGAATCACTATTTT) on contig 15 (1925218 nt) Astart:466651 Aend:466672 Bstart:480931 Bend:480910 CALCULATED DISTANCE APART: 14280 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.48 -> -276861 <- tig#2, B=1252891 nt (start:269985, end:269964) A=3889777 nt (start:26876, end:26855) CALCULATED DISTANCE APART: -276861 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGCCTCTAGTGCATTTGATGC - ACCATGTGGACTGAGTCCTGT) on contig 43 (702740 nt) Astart:104943 Aend:104922 Bstart:87972 Bend:87993 CALCULATED DISTANCE APART: 16971 Pairs unsatisfied in pairing logic within a contig. Pair (TTGCAGTAGAAGTTCTTGTGA - CTTTGAACTACACAACACACA) on contig 13 (2095837 nt) Astart:1422386 Aend:1422365 Bstart:1419597 Bend:1419576 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#9 -> -2252924 <- tig#r.65, A=2687965 nt (start:415421, end:415442) B=411873 nt (start:411493, end:411514) CALCULATED DISTANCE APART: -2252924 < -2000 Pairs unsatisfied in distance within a contig. Pair (AACATATTTTAATATGGGAGA - GGTTTTTTGGTTATGGAAATG) on contig 4 (3700243 nt) Astart:1343036 Aend:1343015 Bstart:1330697 Bend:1330718 CALCULATED DISTANCE APART: 12339 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -4164448 <- tig#r.4, A=2095837 nt (start:125846, end:125867) B=3700243 nt (start:1485786, end:1485807) CALCULATED DISTANCE APART: -4164448 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -190994 <- tig#448, B=2687965 nt (start:210888, end:210867) A=2320 nt (start:106, end:85) CALCULATED DISTANCE APART: -190994 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#10 -> -2881963 <- tig#6, B=2476307 nt (start:652230, end:652251) A=3988516 nt (start:1077886, end:1077865) CALCULATED DISTANCE APART: -2881963 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#17 -> -1208593 <- tig#30, A=1742883 nt (start:988475, end:988496) B=874307 nt (start:474185, end:474164) CALCULATED DISTANCE APART: -1208593 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CCTTCCAGATTTCTTCATCAG - CTTACTCCTTTTGGTTTCTAC) on contig 24 (1160670 nt) Astart:870019 Aend:870040 Bstart:308931 Bend:308952 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#6 -> -1445559 <- tig#r.15, A=3988516 nt (start:3472762, end:3472783) B=1925218 nt (start:975413, end:975434) CALCULATED DISTANCE APART: -1445559 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#90 -> -4261242 <- tig#12, B=305471 nt (start:89720, end:89741) A=4252320 nt (start:4065491, end:4065470) CALCULATED DISTANCE APART: -4261242 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#88 -> -127551 <- tig#102, B=242874 nt (start:124873, end:124894) A=163766 nt (start:29550, end:29529) CALCULATED DISTANCE APART: -127551 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTGCTAATCCAAGTCACTTGG - TTCTTAGCTACCAAGTGGACA) on contig 16 (1744109 nt) Astart:1671283 Aend:1671262 Bstart:1671605 Bend:1671584 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#27 -> -3895974 <- tig#1, B=1116231 nt (start:662070, end:662091) A=4799971 nt (start:3461813, end:3461792) CALCULATED DISTANCE APART: -3895974 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TGAAGCTTGTTCAAGATCTTA - ACATTTCTGCAGCTACAAGAT) on contig 20 (1524840 nt) Astart:703683 Aend:703704 Bstart:702368 Bend:702389 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#12 -> -5448915 <- tig#3, A=4252320 nt (start:1601558, end:1601579) B=3848698 nt (start:2818153, end:2818132) CALCULATED DISTANCE APART: -5448915 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#31 -> -358951 <- tig#r.82, A=872282 nt (start:568952, end:568973) B=359103 nt (start:283482, end:283503) CALCULATED DISTANCE APART: -358951 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#91 -> -231029 <- tig#r.105, A=214867 nt (start:47468, end:47489) B=159552 nt (start:75922, end:75943) CALCULATED DISTANCE APART: -231029 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#6 -> -1888632 <- tig#83, B=3988516 nt (start:2140513, end:2140534) A=262564 nt (start:60629, end:60608) CALCULATED DISTANCE APART: -1888632 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#2 -> -4355190 <- tig#3, A=3889777 nt (start:1666244, end:1666265) B=3848698 nt (start:2151657, end:2151636) CALCULATED DISTANCE APART: -4355190 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAGAGATAAGCTGTTTCTTAA - TCCGTAATCAGAAAACTTCTG) on contig 23 (1298420 nt) Astart:282873 Aend:282894 Bstart:297394 Bend:297373 CALCULATED DISTANCE APART: 14521 Pairs unsatisfied in pairing logic within a contig. Pair (AACTTATAAGTTTCTTTTTGA - GGCTAAGAAAAAGGCTCAAAT) on contig 24 (1160670 nt) Astart:65610 Aend:65631 Bstart:66534 Bend:66555 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#32 -> -1221540 <- tig#33, A=1165067 nt (start:862568, end:862589) B=1401011 nt (start:939041, end:939020) CALCULATED DISTANCE APART: -1221540 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#8 -> -2404792 <- tig#496, B=2829393 nt (start:405777, end:405798) A=1854 nt (start:1176, end:1155) CALCULATED DISTANCE APART: -2404792 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGTTTTTTCTTTTCCTTTTAG - GTGTATAGGGCACCAAGGACC) on contig 72 (488863 nt) Astart:468856 Aend:468835 Bstart:455271 Bend:455292 CALCULATED DISTANCE APART: 13585 Pairs unsatisfied in pairing logic within a contig. Pair (TTTCTTGCGTCACTATATTTA - CACGTTCCCTACGAGTTGTTA) on contig 4 (3700243 nt) Astart:3271148 Aend:3271127 Bstart:3270578 Bend:3270557 Pairs unsatisfied in distance within a contig. Pair (ATATAAGCGTATCAACAACTA - AAGCTCTGCATTCTTGGATTA) on contig 31 (872282 nt) Astart:620500 Aend:620521 Bstart:634880 Bend:634859 CALCULATED DISTANCE APART: 14380 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -2245741 <- tig#r.46, A=2095837 nt (start:103084, end:103105) B=658085 nt (start:385097, end:385118) CALCULATED DISTANCE APART: -2245741 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#83 -> -1299865 <- tig#23, A=262564 nt (start:159641, end:159662) B=1298420 nt (start:1216942, end:1216921) CALCULATED DISTANCE APART: -1299865 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#193 -> -16231 <- tig#84, B=48386 nt (start:13336, end:13357) A=349037 nt (start:1181, end:1160) CALCULATED DISTANCE APART: -16231 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.3 -> -3681829 <- tig#19, B=3848698 nt (start:2765774, end:2765753) A=1545896 nt (start:936055, end:936034) CALCULATED DISTANCE APART: -3681829 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.12 -> -1405592 <- tig#4, B=4252320 nt (start:1086567, end:1086546) A=3700243 nt (start:339025, end:339004) CALCULATED DISTANCE APART: -1405592 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#1 -> -4502497 <- tig#60, B=4799971 nt (start:331904, end:331925) A=677274 nt (start:54430, end:54409) CALCULATED DISTANCE APART: -4502497 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCTACGAAACGTAGTTAAACC - GAGTCATGTGTTAAGCATGGT) on contig 65 (411873 nt) Astart:17471 Aend:17492 Bstart:34921 Bend:34900 CALCULATED DISTANCE APART: 17450 Pairs unsatisfied in distance within a contig. Pair (GACAAGGAAGGTTTCAGCAAG - AGTACTCGGACATGCCAGGCT) on contig 66 (365505 nt) Astart:193241 Aend:193220 Bstart:176817 Bend:176838 CALCULATED DISTANCE APART: 16424 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.560 -> -387975 <- tig#23, B=1577 nt (start:755, end:734) A=1298420 nt (start:407220, end:407199) CALCULATED DISTANCE APART: -387975 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#4 -> -3471734 <- tig#21, B=3700243 nt (start:1199933, end:1199954) A=1453855 nt (start:991424, end:991403) CALCULATED DISTANCE APART: -3471734 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATAGCTGCCGTGAAATACCCT - TTATTTTAAATAATTTCTTGA) on contig 30 (874307 nt) Astart:465989 Aend:465968 Bstart:458099 Bend:458078 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#5 -> -2446835 <- tig#40, A=3413765 nt (start:1604773, end:1604794) B=717909 nt (start:657843, end:657822) CALCULATED DISTANCE APART: -2446835 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#20 -> -3671 <- tig#r.69, A=1524840 nt (start:1515342, end:1515363) B=356702 nt (start:342529, end:342550) CALCULATED DISTANCE APART: -3671 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#10 -> -1370812 <- tig#r.11, A=2476307 nt (start:1316540, end:1316561) B=2258275 nt (start:2027230, end:2027251) CALCULATED DISTANCE APART: -1370812 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#13 -> -2311897 <- tig#28, B=2095837 nt (start:23843, end:23864) A=916743 nt (start:259903, end:259882) CALCULATED DISTANCE APART: -2311897 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#3 -> -7166491 <- tig#r.4, A=3848698 nt (start:68493, end:68514) B=3700243 nt (start:293957, end:293978) CALCULATED DISTANCE APART: -7166491 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CAGTTTATTTCTTTTATATGT - AGAATGCAGCAGTGGTTCACT) on contig 24 (1160670 nt) Astart:868532 Aend:868553 Bstart:310301 Bend:310322 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#3 -> -2982641 <- tig#12, A=3848698 nt (start:1788052, end:1788073) B=4252320 nt (start:941995, end:941974) CALCULATED DISTANCE APART: -2982641 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTTAATTTTTTTGGGGAAAAA - TCACAAGTAAGAAGCTGTAAA) on contig 6 (3988516 nt) Astart:1141244 Aend:1141223 Bstart:1133221 Bend:1133242 CALCULATED DISTANCE APART: 8023 Pairs unsatisfied in pairing logic within a contig. Pair (ATGAGATCTTCAACATAGGAA - GATTACTATAAACTGTTTTAT) on contig 8 (2829393 nt) Astart:1585198 Aend:1585177 Bstart:1566003 Bend:1565982 Pairs unsatisfied in pairing logic within a contig. Pair (TCGTAAATCAAATTCCACAAT - TTTTCTTCTCGTAAAACCCTA) on contig 21 (1453855 nt) Astart:161255 Aend:161276 Bstart:172178 Bend:172199 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#4 -> -2312581 <- tig#25, B=3700243 nt (start:2279385, end:2279406) A=1894032 nt (start:911723, end:911702) CALCULATED DISTANCE APART: -2312581 < -2000 Pairs unsatisfied in distance within a contig. Pair (ACGAGAAATTGTTTTTTTTTT - GCAATGTCAGCCACCGCCGCC) on contig 23 (1298420 nt) Astart:925459 Aend:925480 Bstart:941603 Bend:941582 CALCULATED DISTANCE APART: 16144 Pairs unsatisfied in pairing logic within a contig. Pair (GAGGGTCCCGAAGAAGTTACT - TTTTTTTTCCTTTTTTCTTAA) on contig 11 (2258275 nt) Astart:737463 Aend:737442 Bstart:165520 Bend:165499 Pairs unsatisfied in distance within a contig. Pair (GCTCTTGTTTGTATTGCAGAG - CAGTAAGAGAATTGACCAACG) on contig 6 (3988516 nt) Astart:862957 Aend:862936 Bstart:847499 Bend:847520 CALCULATED DISTANCE APART: 15458 Pairs unsatisfied in distance within a contig. Pair (TCATCATGGTCACTACTTGTG - GCTTTCGGAAAGATCAAGGTA) on contig 53 (487180 nt) Astart:372826 Aend:372847 Bstart:388159 Bend:388138 CALCULATED DISTANCE APART: 15333 Pairs unsatisfied in pairing logic within a contig. Pair (TGGCGCTTCTGACATTATATT - AGGCAAACCGAGCCAAAACTT) on contig 25 (1894032 nt) Astart:1735350 Aend:1735329 Bstart:1734712 Bend:1734691 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#52 -> -331139 <- tig#225, A=490129 nt (start:144645, end:144666) B=33843 nt (start:5655, end:5634) CALCULATED DISTANCE APART: -331139 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#57 -> -3277716 <- tig#3, B=453946 nt (start:82394, end:82415) A=3848698 nt (start:2926164, end:2926143) CALCULATED DISTANCE APART: -3277716 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#76 -> -710465 <- tig#20, A=309514 nt (start:246870, end:246891) B=1524840 nt (start:667821, end:667800) CALCULATED DISTANCE APART: -710465 < -2000 Pairs unsatisfied in distance within a contig. Pair (CAATCCAAGGTATCAAGCTTA - TTCCATCTCTTTTCAGCAATC) on contig 64 (462404 nt) Astart:110054 Aend:110033 Bstart:99694 Bend:99715 CALCULATED DISTANCE APART: 10360 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.15 -> -1599256 <- tig#150, B=1925218 nt (start:1612085, end:1612064) A=91302 nt (start:7171, end:7150) CALCULATED DISTANCE APART: -1599256 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#14 -> -3886181 <- tig#5, B=2017548 nt (start:606085, end:606106) A=3413765 nt (start:2494718, end:2494697) CALCULATED DISTANCE APART: -3886181 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CACACAAATTGTGTGCATTGG - TTTTTTTTCTTTTTTTTCCAT) on contig 15 (1925218 nt) Astart:1655835 Aend:1655856 Bstart:303245 Bend:303224 Pairs unsatisfied in pairing logic within a contig. Pair (AGTTTGTAAATTGATAAATTA - AAGCTATATTGGGGACATGAC) on contig 41 (710158 nt) Astart:24802 Aend:24823 Bstart:26681 Bend:26702 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#83 -> -88875 <- tig#r.207, A=262564 nt (start:154762, end:154783) B=41029 nt (start:39956, end:39977) CALCULATED DISTANCE APART: -88875 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATCTTTAACAGATTAATAGCC - AGAAAGCTGATAACCAGCTCC) on contig 41 (710158 nt) Astart:677546 Aend:677525 Bstart:666098 Bend:666119 CALCULATED DISTANCE APART: 11448 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.165 -> -482239 <- tig#37, B=75987 nt (start:59853, end:59832) A=792205 nt (start:442386, end:442365) CALCULATED DISTANCE APART: -482239 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCTGATGCGAGTGACTATTTC - AGAACTCGTAAGAATCCCAAA) on contig 1 (4799971 nt) Astart:4091355 Aend:4091376 Bstart:4105610 Bend:4105589 CALCULATED DISTANCE APART: 14255 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#12 -> -1393864 <- tig#36, B=4252320 nt (start:3509496, end:3509517) A=792826 nt (start:671040, end:671019) CALCULATED DISTANCE APART: -1393864 < -2000 Pairs unsatisfied in distance within a contig. Pair (AACATCGATGTCAACTGTTGT - TTCAACTCAAATTTGATTTTT) on contig 135 (110204 nt) Astart:71704 Aend:71683 Bstart:60706 Bend:60727 CALCULATED DISTANCE APART: 10998 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#33 -> -638184 <- tig#82, B=1401011 nt (start:915301, end:915322) A=359103 nt (start:172474, end:172453) CALCULATED DISTANCE APART: -638184 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#54 -> -256344 <- tig#48, A=495878 nt (start:472869, end:472890) B=1252891 nt (start:253335, end:253314) CALCULATED DISTANCE APART: -256344 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGGAAATGTTAATAATATATG - TCTTTAAGAAATTTTAGCATT) on contig 9 (2687965 nt) Astart:676319 Aend:676298 Bstart:660406 Bend:660427 CALCULATED DISTANCE APART: 15913 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#9 -> -4726789 <- tig#r.3, A=2687965 nt (start:1296572, end:1296593) B=3848698 nt (start:493302, end:493323) CALCULATED DISTANCE APART: -4726789 < -2000 Pairs unsatisfied in distance within a contig. Pair (GGTCCCGGATTGGATATCTGA - TTAGATTGACTGTTACAAAAA) on contig 7 (3089900 nt) Astart:2927302 Aend:2927323 Bstart:2942350 Bend:2942329 CALCULATED DISTANCE APART: 15048 Pairs unsatisfied in pairing logic within a contig. Pair (CATCACCAACCTCTTTGTCTC - TTTAAGAAAAGAAAAACATAA) on contig 35 (828437 nt) Astart:190849 Aend:190828 Bstart:175338 Bend:175317 Pairs unsatisfied in pairing logic within a contig. Pair (TAAAAAAAGAAGTTAGATAAT - AAAAGAAATAAAGCCATAAAG) on contig 21 (1453855 nt) Astart:413582 Aend:413603 Bstart:421543 Bend:421564 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#25 -> -1537582 <- tig#83, B=1894032 nt (start:567260, end:567281) A=262564 nt (start:230810, end:230789) CALCULATED DISTANCE APART: -1537582 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTCATTGCAATAGTATTGTTC - CAGGTCCTTTCCTCATCTTAT) on contig 25 (1894032 nt) Astart:1734973 Aend:1734952 Bstart:1735084 Bend:1735063 Pairs unsatisfied in distance within a contig. Pair (ATTGAACAAACAAGCTATCAT - TTTTGGTGTATGAGAATTATA) on contig 3 (3848698 nt) Astart:371244 Aend:371223 Bstart:356953 Bend:356974 CALCULATED DISTANCE APART: 14291 Pairs unsatisfied in distance within a contig. Pair (TTTTTTTGGGGAAAAAACAAA - GGATGTCACAAGTAAGAAGCT) on contig 6 (3988516 nt) Astart:1141239 Aend:1141218 Bstart:1133216 Bend:1133237 CALCULATED DISTANCE APART: 8023 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#107 -> -152746 <- tig#110, A=151872 nt (start:43073, end:43094) B=143917 nt (start:63947, end:63926) CALCULATED DISTANCE APART: -152746 < -2000 Pairs unsatisfied in distance within a contig. Pair (GAGCCATACTGAGATGTGAGT - AAAAAAAAAAAAACATGAAAA) on contig 3 (3848698 nt) Astart:692940 Aend:692919 Bstart:677536 Bend:677557 CALCULATED DISTANCE APART: 15404 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#96 -> -207757 <- tig#49, A=190542 nt (start:170183, end:170204) B=529875 nt (start:207398, end:207377) CALCULATED DISTANCE APART: -207757 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AAGTAGACAAGTGAAATTATC - CCAACGCTAGCCTCGTTAACT) on contig 16 (1744109 nt) Astart:1071317 Aend:1071338 Bstart:1074962 Bend:1074983 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#128 -> -74870 <- tig#801, A=120972 nt (start:27101, end:27122) B=1142 nt (start:999, end:978) CALCULATED DISTANCE APART: -74870 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTTCTGACTTTGATGAAATTG - TTCATGAACTTCCAACTGCAA) on contig 65 (411873 nt) Astart:399294 Aend:399273 Bstart:387641 Bend:387662 CALCULATED DISTANCE APART: 11653 Pairs unsatisfied in pairing logic within a contig. Pair (TTAAACTAAAAATAAAACAAA - CAAAAAAAAAAAAAATGTATT) on contig 12 (4252320 nt) Astart:3755940 Aend:3755961 Bstart:1043859 Bend:1043880 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.3 -> -1428960 <- tig#9, B=3848698 nt (start:1211583, end:1211562) A=2687965 nt (start:237377, end:237356) CALCULATED DISTANCE APART: -1428960 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#9 -> -247817 <- tig#r.143, A=2687965 nt (start:2437923, end:2437944) B=102236 nt (start:84461, end:84482) CALCULATED DISTANCE APART: -247817 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#88 -> -243483 <- tig#26, A=242874 nt (start:55844, end:55865) B=1140087 nt (start:76453, end:76432) CALCULATED DISTANCE APART: -243483 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#15 -> -765534 <- tig#24, A=1925218 nt (start:1691886, end:1691907) B=1160670 nt (start:552202, end:552181) CALCULATED DISTANCE APART: -765534 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#33 -> -1275881 <- tig#10, B=1401011 nt (start:974192, end:974213) A=2476307 nt (start:869062, end:869041) CALCULATED DISTANCE APART: -1275881 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.4 -> -505144 <- tig#9, B=3700243 nt (start:24448, end:24427) A=2687965 nt (start:500696, end:500675) CALCULATED DISTANCE APART: -505144 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#10 -> -432536 <- tig#r.178, A=2476307 nt (start:2042154, end:2042175) B=62189 nt (start:43806, end:43827) CALCULATED DISTANCE APART: -432536 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.22 -> -930235 <- tig#29, B=1296783 nt (start:748855, end:748834) A=906229 nt (start:201380, end:201359) CALCULATED DISTANCE APART: -930235 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTCAACAATCGATTTCGATAG - TAAGATTTAGACAAAGAAAGT) on contig 15 (1925218 nt) Astart:991065 Aend:991086 Bstart:1002033 Bend:1002054 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#33 -> -532587 <- tig#112, B=1401011 nt (start:936618, end:936639) A=142199 nt (start:88194, end:88173) CALCULATED DISTANCE APART: -532587 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TCGCAAATATGCAATAGCCAA - CTCGTCGGCGTCATTTGGAAC) on contig 57 (453946 nt) Astart:126799 Aend:126778 Bstart:118621 Bend:118600 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#33 -> -310924 <- tig#r.14, A=1401011 nt (start:1251546, end:1251567) B=2017548 nt (start:1836089, end:1836110) CALCULATED DISTANCE APART: -310924 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AATGAGATATCTTACGCTCTT - GAATATTCGGATCCATCCGTT) on contig 13 (2095837 nt) Astart:1422461 Aend:1422440 Bstart:1419508 Bend:1419487 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#439 -> -496443 <- tig#r.20, A=2510 nt (start:168, end:189) B=1524840 nt (start:1010739, end:1010760) CALCULATED DISTANCE APART: -496443 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#2 -> -6203031 <- tig#5, B=3889777 nt (start:45060, end:45081) A=3413765 nt (start:2378314, end:2378293) CALCULATED DISTANCE APART: -6203031 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#62 -> -706548 <- tig#56, A=401410 nt (start:24203, end:24224) B=468413 nt (start:349341, end:349320) CALCULATED DISTANCE APART: -706548 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GACGATATCCTCTGTTCGGAG - ATCTCAAAAAGGTTATATGTC) on contig 3 (3848698 nt) Astart:167375 Aend:167396 Bstart:184108 Bend:184129 Pairs unsatisfied in distance within a contig. Pair (ATTAAAGTCACAATGTTTCAT - AACTAATTAATCGAAATTATA) on contig 1 (4799971 nt) Astart:3549307 Aend:3549286 Bstart:3534209 Bend:3534230 CALCULATED DISTANCE APART: 15098 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#738 -> -3368322 <- tig#r.2, A=1229 nt (start:912, end:933) B=3889777 nt (start:501772, end:501793) CALCULATED DISTANCE APART: -3368322 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GTAGAGAGATTTCAAGAGAGA - TCACTGGCCATCAATCAAATT) on contig 21 (1453855 nt) Astart:1153829 Aend:1153808 Bstart:1154017 Bend:1153996 Pairs unsatisfied in pairing logic within a contig. Pair (GAACAACAATGTGTCTCTGTT - CGTTAAGCACCGCATTAAATG) on contig 25 (1894032 nt) Astart:1736879 Aend:1736858 Bstart:1733156 Bend:1733135 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#40 -> -2619061 <- tig#10, B=717909 nt (start:313224, end:313245) A=2476307 nt (start:2234376, end:2234355) CALCULATED DISTANCE APART: -2619061 < -2000 Pairs unsatisfied in distance within a contig. Pair (GATCCTCCTTCTTGTATCGCT - CTTCTGAACAAAACATCTAAA) on contig 47 (618158 nt) Astart:550219 Aend:550198 Bstart:537951 Bend:537972 CALCULATED DISTANCE APART: 12268 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.33 -> -1239703 <- tig#125, B=1401011 nt (start:1188377, end:1188356) A=121823 nt (start:71326, end:71305) CALCULATED DISTANCE APART: -1239703 < -2000 Pairs unsatisfied in distance within a contig. Pair (CAAAGAAAGCACAAATTAAGA - TCTTCGTAAATCGAGAACCCG) on contig 33 (1401011 nt) Astart:910995 Aend:911016 Bstart:926706 Bend:926685 CALCULATED DISTANCE APART: 15711 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.31 -> -387801 <- tig#856, B=872282 nt (start:407486, end:407465) A=1096 nt (start:315, end:294) CALCULATED DISTANCE APART: -387801 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#55 -> -377857 <- tig#r.12, A=473235 nt (start:75716, end:75737) B=4252320 nt (start:4251982, end:4252003) CALCULATED DISTANCE APART: -377857 < -2000 Pairs unsatisfied in distance within a contig. Pair (CCTCACTCAACCCAAAATTAA - AAATATTTCTTTAGTAGAAGT) on contig 46 (658085 nt) Astart:161082 Aend:161103 Bstart:165621 Bend:165600 CALCULATED DISTANCE APART: 4539 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -3671273 <- tig#6, A=722869 nt (start:304221, end:304242) B=3988516 nt (start:3272625, end:3272604) CALCULATED DISTANCE APART: -3671273 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GAAGTTTGCTTCCTTTGAGAC - AAACAAACAACGATAAGATTC) on contig 6 (3988516 nt) Astart:3477374 Aend:3477395 Bstart:3475529 Bend:3475550 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#25 -> -453359 <- tig#r.26, A=1894032 nt (start:1593661, end:1593682) B=1140087 nt (start:967099, end:967120) CALCULATED DISTANCE APART: -453359 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#146 -> -713004 <- tig#37, B=173632 nt (start:59310, end:59331) A=792205 nt (start:618682, end:618661) CALCULATED DISTANCE APART: -713004 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#2 -> -4947435 <- tig#r.1, A=3889777 nt (start:2540798, end:2540819) B=4799971 nt (start:1181515, end:1181536) CALCULATED DISTANCE APART: -4947435 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#15 -> -469013 <- tig#35, A=1925218 nt (start:1657749, end:1657770) B=828437 nt (start:221544, end:221523) CALCULATED DISTANCE APART: -469013 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#2 -> -2399367 <- tig#20, B=3889777 nt (start:2725428, end:2725449) A=1524840 nt (start:1255018, end:1254997) CALCULATED DISTANCE APART: -2399367 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.48 -> -2244592 <- tig#1, B=1252891 nt (start:856576, end:856555) A=4799971 nt (start:1408016, end:1407995) CALCULATED DISTANCE APART: -2244592 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#14 -> -1022278 <- tig#110, A=2017548 nt (start:1114194, end:1114215) B=143917 nt (start:138924, end:138903) CALCULATED DISTANCE APART: -1022278 < -2000 Pairs unsatisfied in distance within a contig. Pair (GACATGCACAGAGATAGTGGC - TAGTCAGGCTTTTCTTCCCTA) on contig 20 (1524840 nt) Astart:806954 Aend:806933 Bstart:789259 Bend:789280 CALCULATED DISTANCE APART: 17695 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.12 -> -3928445 <- tig#30, B=4252320 nt (start:3287913, end:3287892) A=874307 nt (start:660532, end:660511) CALCULATED DISTANCE APART: -3928445 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#43 -> -1866374 <- tig#25, A=702740 nt (start:163082, end:163103) B=1894032 nt (start:1346716, end:1346695) CALCULATED DISTANCE APART: -1866374 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#45 -> -1102173 <- tig#r.19, A=672231 nt (start:402688, end:402709) B=1545896 nt (start:693266, end:693287) CALCULATED DISTANCE APART: -1102173 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTGCATACAAAAAAACGTTAA - AGATTATGAAATTTTAAGATC) on contig 4 (3700243 nt) Astart:757561 Aend:757582 Bstart:771256 Bend:771235 CALCULATED DISTANCE APART: 13695 Pairs unsatisfied in distance within a contig. Pair (GCTGACGTAAGAATCTACTTG - TTTTACAGCTCGAAGCGAACA) on contig 22 (1296783 nt) Astart:969137 Aend:969116 Bstart:955543 Bend:955564 CALCULATED DISTANCE APART: 13594 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#224 -> -512120 <- tig#11, A=33965 nt (start:17417, end:17438) B=2258275 nt (start:515572, end:515551) CALCULATED DISTANCE APART: -512120 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#1 -> -3636126 <- tig#14, B=4799971 nt (start:1733820, end:1733841) A=2017548 nt (start:589975, end:589954) CALCULATED DISTANCE APART: -3636126 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -297876 <- tig#r.18, A=1744109 nt (start:1512261, end:1512282) B=1637738 nt (start:1551710, end:1551731) CALCULATED DISTANCE APART: -297876 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#8 -> -2559463 <- tig#r.93, A=2829393 nt (start:372652, end:372673) B=203845 nt (start:81123, end:81144) CALCULATED DISTANCE APART: -2559463 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#33 -> -2842710 <- tig#13, B=1401011 nt (start:284082, end:284103) A=2095837 nt (start:1745781, end:1745760) CALCULATED DISTANCE APART: -2842710 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#76 -> -357795 <- tig#41, A=309514 nt (start:20060, end:20081) B=710158 nt (start:88341, end:88320) CALCULATED DISTANCE APART: -357795 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TGGGGAATTTGGGACCATGAG - ACATCCAATGGCTTCAGCAGA) on contig 3 (3848698 nt) Astart:2299852 Aend:2299831 Bstart:2285697 Bend:2285676 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#32 -> -691777 <- tig#152, A=1165067 nt (start:491990, end:492011) B=85348 nt (start:38700, end:38679) CALCULATED DISTANCE APART: -691777 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.194 -> -1852484 <- tig#10, B=75410 nt (start:62171, end:62150) A=2476307 nt (start:1810313, end:1810292) CALCULATED DISTANCE APART: -1852484 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.4 -> -1359601 <- tig#35, B=3700243 nt (start:1371697, end:1371676) A=828437 nt (start:7904, end:7883) CALCULATED DISTANCE APART: -1359601 < -2000 Pairs unsatisfied in distance within a contig. Pair (TATTTATATAAATGTTGCTAT - GGAGGACATAGAAGACGACAT) on contig 33 (1401011 nt) Astart:911871 Aend:911892 Bstart:927592 Bend:927571 CALCULATED DISTANCE APART: 15721 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#11 -> -2782174 <- tig#8, A=2258275 nt (start:321358, end:321379) B=2829393 nt (start:865257, end:865236) CALCULATED DISTANCE APART: -2782174 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#92 -> -1977230 <- tig#r.3, A=204193 nt (start:171438, end:171459) B=3848698 nt (start:1884223, end:1884244) CALCULATED DISTANCE APART: -1977230 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#2 -> -6894941 <- tig#5, B=3889777 nt (start:115395, end:115416) A=3413765 nt (start:3140559, end:3140538) CALCULATED DISTANCE APART: -6894941 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#17 -> -2236312 <- tig#13, A=1742883 nt (start:1383871, end:1383892) B=2095837 nt (start:1897300, end:1897279) CALCULATED DISTANCE APART: -2236312 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCCTGATGAAACTGTAAAATA - TTGATGACATATTTTCCGACG) on contig 61 (407835 nt) Astart:357043 Aend:357022 Bstart:340980 Bend:341001 CALCULATED DISTANCE APART: 16063 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.23 -> -1019364 <- tig#4, B=1298420 nt (start:121694, end:121673) A=3700243 nt (start:917670, end:917649) CALCULATED DISTANCE APART: -1019364 < -2000 Pairs unsatisfied in distance within a contig. Pair (CAGAGAAAATAGATGCATGAG - TGGCAAGGCTCATGGAAATGG) on contig 17 (1742883 nt) Astart:1146814 Aend:1146835 Bstart:1160730 Bend:1160709 CALCULATED DISTANCE APART: 13916 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#1 -> -4497503 <- tig#461, A=4799971 nt (start:283085, end:283106) B=2196 nt (start:617, end:596) CALCULATED DISTANCE APART: -4497503 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#33 -> -1142833 <- tig#r.16, A=1401011 nt (start:586625, end:586646) B=1744109 nt (start:1395662, end:1395683) CALCULATED DISTANCE APART: -1142833 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#24 -> -4437556 <- tig#r.12, A=1160670 nt (start:596692, end:596713) B=4252320 nt (start:358742, end:358763) CALCULATED DISTANCE APART: -4437556 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#17 -> -3374549 <- tig#r.2, A=1742883 nt (start:110019, end:110040) B=3889777 nt (start:2128092, end:2128113) CALCULATED DISTANCE APART: -3374549 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ACAGTTTTCTCCCACTTGTTG - ATTTACAATCTCAACCATCAT) on contig 3 (3848698 nt) Astart:297955 Aend:297976 Bstart:311938 Bend:311959 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#3 -> -1632678 <- tig#18, A=3848698 nt (start:3604573, end:3604594) B=1637738 nt (start:1408553, end:1408532) CALCULATED DISTANCE APART: -1632678 < -2000 Pairs unsatisfied in distance within a contig. Pair (CAAACAAGATGGTCTCTAACT - ATAGGGATTATGGATTTCACT) on contig 10 (2476307 nt) Astart:924030 Aend:924009 Bstart:908893 Bend:908914 CALCULATED DISTANCE APART: 15137 Pairs unsatisfied in pairing logic within a contig. Pair (GTCATGAAAGGAGTCATGAAA - AGGGGAACCAACCACAAGGGG) on contig 20 (1524840 nt) Astart:703536 Aend:703557 Bstart:702526 Bend:702547 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#116 -> -187723 <- tig#92, A=139567 nt (start:15071, end:15092) B=204193 nt (start:83227, end:83206) CALCULATED DISTANCE APART: -187723 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTAGCTAGAAACTTCAGTGTT - TGTTGATCTGCTTCTTTTTTT) on contig 43 (702740 nt) Astart:223577 Aend:223598 Bstart:241511 Bend:241490 CALCULATED DISTANCE APART: 17934 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#2 -> -4229649 <- tig#4, B=3889777 nt (start:560982, end:561003) A=3700243 nt (start:920854, end:920833) CALCULATED DISTANCE APART: -4229649 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#20 -> -1157942 <- tig#r.89, A=1524840 nt (start:520641, end:520662) B=343084 nt (start:169341, end:169362) CALCULATED DISTANCE APART: -1157942 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CTCTTCCAGGTGATAGGTAAC - GCCAACGAAGTAGATATATTA) on contig 21 (1453855 nt) Astart:160168 Aend:160189 Bstart:173244 Bend:173265 Pairs unsatisfied in distance within a contig. Pair (AAAGAAGCTTGAAGAAAGAAA - ATGTGCTTGTTTATTTATAAG) on contig 7 (3089900 nt) Astart:2332945 Aend:2332966 Bstart:2347225 Bend:2347204 CALCULATED DISTANCE APART: 14280 Pairs unsatisfied in pairing logic within a contig. Pair (CGAGGACAACGCAGCAACCAC - GAACAGTTTCCAACTTTTTGA) on contig 57 (453946 nt) Astart:124032 Aend:124011 Bstart:121274 Bend:121253 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.25 -> -1636842 <- tig#13, B=1894032 nt (start:1002571, end:1002550) A=2095837 nt (start:654271, end:654250) CALCULATED DISTANCE APART: -1636842 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTGCTTCCTTTGAGACCATTG - GCATGAAACAAACAACGATAA) on contig 6 (3988516 nt) Astart:3477379 Aend:3477400 Bstart:3475524 Bend:3475545 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#1 -> -1857930 <- tig#2, B=4799971 nt (start:4400310, end:4400331) A=3889777 nt (start:1478269, end:1478248) CALCULATED DISTANCE APART: -1857930 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.48 -> -194155 <- tig#60, B=1252891 nt (start:159793, end:159772) A=677274 nt (start:54362, end:54341) CALCULATED DISTANCE APART: -194155 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#92 -> -1139568 <- tig#48, A=204193 nt (start:79379, end:79400) B=1252891 nt (start:1034754, end:1034733) CALCULATED DISTANCE APART: -1139568 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.138 -> -3176948 <- tig#5, B=108302 nt (start:101614, end:101593) A=3413765 nt (start:3095334, end:3095313) CALCULATED DISTANCE APART: -3176948 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TGCTATGCACGATGCTCCTTT - GACCCCTGAACCCAAAGTCTT) on contig 27 (1116231 nt) Astart:384349 Aend:384328 Bstart:369793 Bend:369772 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#84 -> -2012001 <- tig#13, B=349037 nt (start:62047, end:62068) A=2095837 nt (start:1745011, end:1744990) CALCULATED DISTANCE APART: -2012001 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#106 -> -621844 <- tig#r.33, A=156668 nt (start:99141, end:99162) B=1401011 nt (start:816694, end:816715) CALCULATED DISTANCE APART: -621844 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#99 -> -29210 <- tig#215, A=184228 nt (start:166752, end:166773) B=36901 nt (start:31734, end:31713) CALCULATED DISTANCE APART: -29210 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CAATCACTAGTCATCTAGAGA - CTTTTTTCATCTGTTTGTTCA) on contig 4 (3700243 nt) Astart:539508 Aend:539529 Bstart:539971 Bend:539992 Pairs unsatisfied in distance within a contig. Pair (GTATCTTTGAGTTGATGAAGA - ATTGAACCTAAACTCACACAT) on contig 24 (1160670 nt) Astart:813483 Aend:813462 Bstart:768624 Bend:768645 CALCULATED DISTANCE APART: 44859 Pairs unsatisfied in pairing logic within a contig. Pair (TTTTTGTGGATATATAAACGG - CATTTCTTGCTCCTTCTCAAG) on contig 13 (2095837 nt) Astart:1419630 Aend:1419609 Bstart:1422620 Bend:1422599 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.134 -> -1595265 <- tig#8, B=111627 nt (start:31499, end:31478) A=2829393 nt (start:1583766, end:1583745) CALCULATED DISTANCE APART: -1595265 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -4537311 <- tig#1, B=2687965 nt (start:1571131, end:1571110) A=4799971 nt (start:2986180, end:2986159) CALCULATED DISTANCE APART: -4537311 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#18 -> -781810 <- tig#79, B=1637738 nt (start:1090511, end:1090532) A=300950 nt (start:254583, end:254562) CALCULATED DISTANCE APART: -781810 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTTGAGTTGATGAAGAAGTAC - GTAGCATTGAACCTAAACTCA) on contig 24 (1160670 nt) Astart:813478 Aend:813457 Bstart:768619 Bend:768640 CALCULATED DISTANCE APART: 44859 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#30 -> -1675303 <- tig#r.16, A=874307 nt (start:251801, end:251822) B=1744109 nt (start:671312, end:671333) CALCULATED DISTANCE APART: -1675303 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#9 -> -5114311 <- tig#12, A=2687965 nt (start:414031, end:414052) B=4252320 nt (start:2860377, end:2860356) CALCULATED DISTANCE APART: -5114311 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#8 -> -2947491 <- tig#r.17, A=2829393 nt (start:375672, end:375693) B=1742883 nt (start:1229113, end:1229134) CALCULATED DISTANCE APART: -2947491 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#205 -> -210580 <- tig#r.47, A=41546 nt (start:28250, end:28271) B=618158 nt (start:400874, end:400895) CALCULATED DISTANCE APART: -210580 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CGGAAACAACAAACACACAAC - TCTCTCCTCAGCCGACTCGCG) on contig 15 (1925218 nt) Astart:993842 Aend:993863 Bstart:998483 Bend:998504 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#154 -> -892244 <- tig#r.18, A=84292 nt (start:8323, end:8344) B=1637738 nt (start:801463, end:801484) CALCULATED DISTANCE APART: -892244 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.27 -> -545691 <- tig#9, B=1116231 nt (start:328165, end:328144) A=2687965 nt (start:237526, end:237505) CALCULATED DISTANCE APART: -545691 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#134 -> -202416 <- tig#12, A=111627 nt (start:32400, end:32421) B=4252320 nt (start:143189, end:143168) CALCULATED DISTANCE APART: -202416 < -2000 Pairs unsatisfied in distance within a contig. Pair (GCGTATTCGTTTCATACACTC - TTTGGGCTTCTTCACCACAAG) on contig 30 (874307 nt) Astart:194850 Aend:194871 Bstart:210771 Bend:210750 CALCULATED DISTANCE APART: 15921 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#19 -> -2210917 <- tig#r.21, A=1545896 nt (start:764948, end:764969) B=1453855 nt (start:3886, end:3907) CALCULATED DISTANCE APART: -2210917 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAGAAGGCTCATCATGAATTC - CTTATCGACGATTTTCGGAAG) on contig 22 (1296783 nt) Astart:478979 Aend:479000 Bstart:493932 Bend:493911 CALCULATED DISTANCE APART: 14953 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#4 -> -1180111 <- tig#13, A=3700243 nt (start:2935052, end:2935073) B=2095837 nt (start:434920, end:434899) CALCULATED DISTANCE APART: -1180111 < -2000 Pairs unsatisfied in distance within a contig. Pair (GCTGACTTGGAGTGGTATCAA - GACATTTAAATAACAATTCTT) on contig 63 (393958 nt) Astart:290490 Aend:290469 Bstart:273759 Bend:273780 CALCULATED DISTANCE APART: 16731 Pairs unsatisfied in distance within a contig. Pair (CAGAAGGACTCGATTAATAAT - TCTGCATAGTGAATGATATAA) on contig 20 (1524840 nt) Astart:795792 Aend:795771 Bstart:779773 Bend:779794 CALCULATED DISTANCE APART: 16019 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.12 -> -2898999 <- tig#168, B=4252320 nt (start:2860376, end:2860355) A=74528 nt (start:58623, end:58602) CALCULATED DISTANCE APART: -2898999 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.69 -> -3168922 <- tig#4, B=356702 nt (start:147791, end:147770) A=3700243 nt (start:3041131, end:3041110) CALCULATED DISTANCE APART: -3168922 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#98 -> -374112 <- tig#3, A=186419 nt (start:168505, end:168526) B=3848698 nt (start:376198, end:376177) CALCULATED DISTANCE APART: -374112 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#10 -> -1794643 <- tig#r.46, A=2476307 nt (start:1285216, end:1285237) B=658085 nt (start:34533, end:34554) CALCULATED DISTANCE APART: -1794643 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#26 -> -511210 <- tig#291, A=1140087 nt (start:621627, end:621648) B=15525 nt (start:12750, end:12729) CALCULATED DISTANCE APART: -511210 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATGTCTTACTTTTCCATATGC - TCAGCTAGGGTTTATCTTCAC) on contig 40 (717909 nt) Astart:120395 Aend:120374 Bstart:104500 Bend:104521 CALCULATED DISTANCE APART: 15895 Pairs unsatisfied in distance within a contig. Pair (GATTCTCCAGCAGGTATGAAA - AAAAAAAAAAAAAAAGGCCTT) on contig 37 (792205 nt) Astart:69724 Aend:69745 Bstart:84454 Bend:84433 CALCULATED DISTANCE APART: 14730 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#9 -> -3683306 <- tig#15, A=2687965 nt (start:312273, end:312294) B=1925218 nt (start:1327614, end:1327593) CALCULATED DISTANCE APART: -3683306 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#49 -> -2595255 <- tig#12, A=529875 nt (start:355760, end:355781) B=4252320 nt (start:2441140, end:2441119) CALCULATED DISTANCE APART: -2595255 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#60 -> -3093687 <- tig#r.9, A=677274 nt (start:118744, end:118765) B=2687965 nt (start:132808, end:132829) CALCULATED DISTANCE APART: -3093687 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#2 -> -6384478 <- tig#5, B=3889777 nt (start:476482, end:476503) A=3413765 nt (start:2991183, end:2991162) CALCULATED DISTANCE APART: -6384478 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GCGCTCATTAGCAGCTCTAGC - ACACGAAAGTCGAATTAAAAT) on contig 57 (453946 nt) Astart:126276 Aend:126255 Bstart:119114 Bend:119093 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -3566928 <- tig#22, B=2687965 nt (start:325360, end:325381) A=1296783 nt (start:1224323, end:1224302) CALCULATED DISTANCE APART: -3566928 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -1277341 <- tig#6, B=2687965 nt (start:1953070, end:1953091) A=3988516 nt (start:562446, end:562425) CALCULATED DISTANCE APART: -1277341 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3796103 <- tig#4, B=916743 nt (start:730776, end:730797) A=3700243 nt (start:3630136, end:3630115) CALCULATED DISTANCE APART: -3796103 < -2000 Pairs unsatisfied in distance within a contig. Pair (ACAAACTTTCATGAAAATTCG - CATATACAAATGTATATATTA) on contig 22 (1296783 nt) Astart:32366 Aend:32345 Bstart:17067 Bend:17088 CALCULATED DISTANCE APART: 15299 Pairs unsatisfied in pairing logic within a contig. Pair (ACTAGTCATCTAGAGAGATTT - TATAACTTTTTTCATCTGTTT) on contig 4 (3700243 nt) Astart:539513 Aend:539534 Bstart:539966 Bend:539987 Pairs unsatisfied in pairing logic within a contig. Pair (TATGTTTGATTAGTACAAAAA - GGACTATCATACAACATGAAA) on contig 20 (1524840 nt) Astart:275149 Aend:275128 Bstart:273821 Bend:273800 Pairs unsatisfied in distance within a contig. Pair (TACTTTTTGATAACTCGAAGT - ATTCTGAAGCAAAGGTAGGAA) on contig 143 (102236 nt) Astart:91694 Aend:91673 Bstart:77483 Bend:77504 CALCULATED DISTANCE APART: 14211 Pairs unsatisfied in distance within a contig. Pair (ATGTTAATAATATATGATCTG - CGGTATCTTTAAGAAATTTTA) on contig 9 (2687965 nt) Astart:676314 Aend:676293 Bstart:660401 Bend:660422 CALCULATED DISTANCE APART: 15913 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#106 -> -2370160 <- tig#5, A=156668 nt (start:31603, end:31624) B=3413765 nt (start:2265095, end:2265074) CALCULATED DISTANCE APART: -2370160 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TATATGAATGTCTACTTTTGT - ATAAGGAGTCGTTTGAATAAC) on contig 78 (303746 nt) Astart:39737 Aend:39758 Bstart:42179 Bend:42200 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -4035546 <- tig#1, A=722869 nt (start:624870, end:624891) B=4799971 nt (start:3957547, end:3957526) CALCULATED DISTANCE APART: -4035546 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#92 -> -1281911 <- tig#15, A=204193 nt (start:171997, end:172018) B=1925218 nt (start:1269715, end:1269694) CALCULATED DISTANCE APART: -1281911 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.144 -> -3615785 <- tig#4, B=102078 nt (start:93408, end:93387) A=3700243 nt (start:3542377, end:3542356) CALCULATED DISTANCE APART: -3615785 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#29 -> -336250 <- tig#58, A=906229 nt (start:775927, end:775948) B=439424 nt (start:225948, end:225927) CALCULATED DISTANCE APART: -336250 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTTAACCGAACAGGGCCTAAG - TAGTTAGCTTCATGGCTTCTT) on contig 7 (3089900 nt) Astart:693169 Aend:693190 Bstart:693358 Bend:693337 CALCULATED DISTANCE APART: 189 Pairs unsatisfied in pairing logic within a contig. Pair (ATCTACATGTTTCCATTTCAT - AAACCAAAAGATGTTGTGAGA) on contig 2 (3889777 nt) Astart:3787775 Aend:3787754 Bstart:3778822 Bend:3778801 Pairs unsatisfied in pairing logic within a contig. Pair (TCTTTGTTTGACACTGTCTCT - AAATGTCCGATATGTATGGCT) on contig 57 (453946 nt) Astart:124954 Aend:124933 Bstart:120384 Bend:120363 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -5392307 <- tig#5, B=2687965 nt (start:414837, end:414858) A=3413765 nt (start:3139179, end:3139158) CALCULATED DISTANCE APART: -5392307 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#2 -> -6203031 <- tig#5, B=3889777 nt (start:45065, end:45086) A=3413765 nt (start:2378319, end:2378298) CALCULATED DISTANCE APART: -6203031 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#39 -> -319297 <- tig#21, B=722869 nt (start:597075, end:597096) A=1453855 nt (start:213503, end:213482) CALCULATED DISTANCE APART: -319297 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.85 -> -1549706 <- tig#14, B=256493 nt (start:248624, end:248603) A=2017548 nt (start:1321082, end:1321061) CALCULATED DISTANCE APART: -1549706 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -2155209 <- tig#15, A=1160670 nt (start:597542, end:597563) B=1925218 nt (start:1612081, end:1612060) CALCULATED DISTANCE APART: -2155209 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#2 -> -4571908 <- tig#6, B=3889777 nt (start:1080026, end:1080047) A=3988516 nt (start:1782157, end:1782136) CALCULATED DISTANCE APART: -4571908 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CAATGGAACAACAATGTGTCT - AGCACCGCATTAAATGCCGCC) on contig 25 (1894032 nt) Astart:1736884 Aend:1736863 Bstart:1733151 Bend:1733130 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#6 -> -3415497 <- tig#17, A=3988516 nt (start:1342742, end:1342763) B=1742883 nt (start:789723, end:789702) CALCULATED DISTANCE APART: -3415497 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#52 -> -698621 <- tig#r.29, A=490129 nt (start:358139, end:358160) B=906229 nt (start:319598, end:319619) CALCULATED DISTANCE APART: -698621 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GCACTTTAGCCCAAAGGCAAA - AGAATAGCTTCTCTTGAGAGT) on contig 7 (3089900 nt) Astart:1294916 Aend:1294895 Bstart:1299348 Bend:1299327 Pairs unsatisfied in pairing logic within a contig. Pair (AACAACGTTTAGATTATCAAT - CTTCATCAACAAATCCGGCTT) on contig 12 (4252320 nt) Astart:3518024 Aend:3518003 Bstart:3512491 Bend:3512470 Pairs unsatisfied in pairing logic within a contig. Pair (TGGGTCACTTACGGAAAACGG - TCAGTTTAGCTCTGTTTCTTA) on contig 19 (1545896 nt) Astart:390494 Aend:390515 Bstart:401047 Bend:401068 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#6 -> -4068265 <- tig#41, A=3988516 nt (start:496021, end:496042) B=710158 nt (start:595770, end:595749) CALCULATED DISTANCE APART: -4068265 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#27 -> -1936809 <- tig#3, B=1116231 nt (start:46623, end:46644) A=3848698 nt (start:887201, end:887180) CALCULATED DISTANCE APART: -1936809 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CATGCCTCACAAAGATATTAG - TAACCCGAGTCTTCATCATCC) on contig 25 (1894032 nt) Astart:1736499 Aend:1736478 Bstart:1733544 Bend:1733523 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#3 -> -3481588 <- tig#11, B=3848698 nt (start:2426716, end:2426737) A=2258275 nt (start:2079606, end:2079585) CALCULATED DISTANCE APART: -3481588 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#4 -> -1354707 <- tig#15, A=3700243 nt (start:3653850, end:3653871) B=1925218 nt (start:1328314, end:1328293) CALCULATED DISTANCE APART: -1354707 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#161 -> -18545 <- tig#155, A=79517 nt (start:75328, end:75349) B=83971 nt (start:34356, end:34335) CALCULATED DISTANCE APART: -18545 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#249 -> -2879561 <- tig#6, A=24578 nt (start:3614, end:3635) B=3988516 nt (start:2878597, end:2878576) CALCULATED DISTANCE APART: -2879561 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#32 -> -1185184 <- tig#r.45, A=1165067 nt (start:492222, end:492243) B=672231 nt (start:139892, end:139913) CALCULATED DISTANCE APART: -1185184 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#37 -> -608184 <- tig#r.137, A=792205 nt (start:251085, end:251106) B=108483 nt (start:21419, end:21440) CALCULATED DISTANCE APART: -608184 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#76 -> -196040 <- tig#r.147, A=309514 nt (start:157449, end:157470) B=92417 nt (start:28442, end:28463) CALCULATED DISTANCE APART: -196040 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGCAATGCCAATGATCATCGT - GTCAAGTCTTGGAAAAAAAAA) on contig 9 (2687965 nt) Astart:1057604 Aend:1057583 Bstart:1040880 Bend:1040901 CALCULATED DISTANCE APART: 16724 Pairs unsatisfied in distance within a contig. Pair (AGATCAAGAATCAGTCACCAA - GACGAAATTGTAGTGACCTCC) on contig 12 (4252320 nt) Astart:3897104 Aend:3897125 Bstart:3913368 Bend:3913347 CALCULATED DISTANCE APART: 16264 Pairs unsatisfied in pairing logic within a contig. Pair (CACACGAAAAACAAAAAAAAA - ATAGTTTTCAATCCGCTGCTG) on contig 3 (3848698 nt) Astart:1017918 Aend:1017897 Bstart:1001847 Bend:1001826 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#40 -> -699217 <- tig#26, A=717909 nt (start:394019, end:394040) B=1140087 nt (start:395327, end:395306) CALCULATED DISTANCE APART: -699217 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TATGTGTATTTTACTCAGCAT - AACGCCTTAAGGATCTCAAAA) on contig 49 (529875 nt) Astart:384053 Aend:384074 Bstart:396691 Bend:396712 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.37 -> -765478 <- tig#20, B=792205 nt (start:494390, end:494369) A=1524840 nt (start:291088, end:291067) CALCULATED DISTANCE APART: -765478 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATGGTCTGATTTCTGGTTCTT - TACCTTTGGTGGAATTCTCAG) on contig 6 (3988516 nt) Astart:3476653 Aend:3476674 Bstart:3476314 Bend:3476335 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#65 -> -515491 <- tig#35, B=411873 nt (start:322130, end:322151) A=828437 nt (start:445748, end:445727) CALCULATED DISTANCE APART: -515491 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGAGAGTACGACGAAGTTGTG - TGAACATAATTTACTTTAAGA) on contig 7 (3089900 nt) Astart:331497 Aend:331476 Bstart:328713 Bend:328692 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#728 -> -1816353 <- tig#r.13, A=1247 nt (start:1207, end:1228) B=2095837 nt (start:259524, end:259545) CALCULATED DISTANCE APART: -1816353 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -1976790 <- tig#4, A=1894032 nt (start:625464, end:625485) B=3700243 nt (start:728222, end:728201) CALCULATED DISTANCE APART: -1976790 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GCTAGTCTCTGTCGTATGGTG - ATTTGATAGGATTATGGTAAA) on contig 1 (4799971 nt) Astart:327127 Aend:327148 Bstart:338425 Bend:338446 Pairs unsatisfied in distance within a contig. Pair (TATGAGGTGGTGTGAAAGTGA - TCCCCACAACAGTTGACCAAA) on contig 7 (3089900 nt) Astart:2457805 Aend:2457784 Bstart:2440461 Bend:2440482 CALCULATED DISTANCE APART: 17344 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#3 -> -3239043 <- tig#1, A=3848698 nt (start:2543192, end:2543213) B=4799971 nt (start:1953537, end:1953516) CALCULATED DISTANCE APART: -3239043 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CAAAGCCATCATCATCAGAGA - TCAAAGAAGATGAATAAAAAC) on contig 5 (3413765 nt) Astart:2554404 Aend:2554383 Bstart:2556572 Bend:2556551 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#4 -> -4747117 <- tig#20, B=3700243 nt (start:313969, end:313990) A=1524840 nt (start:1380843, end:1380822) CALCULATED DISTANCE APART: -4747117 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#4 -> -4776130 <- tig#r.1, A=3700243 nt (start:1868310, end:1868331) B=4799971 nt (start:1835774, end:1835795) CALCULATED DISTANCE APART: -4776130 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#13 -> -2074914 <- tig#20, A=2095837 nt (start:123153, end:123174) B=1524840 nt (start:122230, end:122209) CALCULATED DISTANCE APART: -2074914 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.67 -> -1120174 <- tig#27, B=362727 nt (start:45929, end:45908) A=1116231 nt (start:1094245, end:1094224) CALCULATED DISTANCE APART: -1120174 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.166 -> -120144 <- tig#117, B=75506 nt (start:34183, end:34162) A=138887 nt (start:105961, end:105940) CALCULATED DISTANCE APART: -120144 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#82 -> -424554 <- tig#34, A=359103 nt (start:142217, end:142238) B=868147 nt (start:227668, end:227647) CALCULATED DISTANCE APART: -424554 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#50 -> -579670 <- tig#20, B=498313 nt (start:190561, end:190582) A=1524840 nt (start:291918, end:291897) CALCULATED DISTANCE APART: -579670 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTATTTCTAACATTATTTGTA - AAGAGGTAAACCCTGTTTTTC) on contig 144 (102078 nt) Astart:18301 Aend:18280 Bstart:1498 Bend:1519 CALCULATED DISTANCE APART: 16803 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.31 -> -2960218 <- tig#9, B=872282 nt (start:520504, end:520483) A=2687965 nt (start:2459714, end:2459693) CALCULATED DISTANCE APART: -2960218 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#110 -> -98503 <- tig#22, A=143917 nt (start:134010, end:134031) B=1296783 nt (start:108596, end:108575) CALCULATED DISTANCE APART: -98503 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#5 -> -1828731 <- tig#73, B=3413765 nt (start:1734392, end:1734413) A=318307 nt (start:169358, end:169337) CALCULATED DISTANCE APART: -1828731 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGAAACAGTTTAATAACAAAT - TAAGAGATAAAAATATCGTAT) on contig 8 (2829393 nt) Astart:771182 Aend:771203 Bstart:788584 Bend:788563 CALCULATED DISTANCE APART: 17402 Pairs unsatisfied in pairing logic within a contig. Pair (CTTGTTCAAGATCTTATCCAT - TGCTTACATTTCTGCAGCTAC) on contig 20 (1524840 nt) Astart:703688 Aend:703709 Bstart:702363 Bend:702384 Pairs unsatisfied in distance within a contig. Pair (GCACATGCAATAACCGATCTT - GATTTAATCACGAGGAAAATA) on contig 13 (2095837 nt) Astart:871800 Aend:871821 Bstart:886838 Bend:886817 CALCULATED DISTANCE APART: 15038 Pairs unsatisfied in distance within a contig. Pair (ATTAATTAGTTTGATCATTTA - GAGGAACTTTAAACAATTAAT) on contig 90 (305471 nt) Astart:264004 Aend:264025 Bstart:280933 Bend:280912 CALCULATED DISTANCE APART: 16929 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#1 -> -2661364 <- tig#4, A=4799971 nt (start:2132651, end:2132672) B=3700243 nt (start:14044, end:14023) CALCULATED DISTANCE APART: -2661364 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GCATCAAAAATCTTTCTCAAC - TTTCTGGATCATAATCTATGG) on contig 6 (3988516 nt) Astart:1955307 Aend:1955328 Bstart:1980270 Bend:1980291 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -190994 <- tig#448, B=2687965 nt (start:210893, end:210872) A=2320 nt (start:101, end:80) CALCULATED DISTANCE APART: -190994 < -2000 Pairs unsatisfied in distance within a contig. Pair (CATCTTCTTTCTATTTGTTTT - GATTATAGACGCTAGATATTT) on contig 24 (1160670 nt) Astart:865741 Aend:865762 Bstart:879677 Bend:879656 CALCULATED DISTANCE APART: 13936 Pairs unsatisfied in distance within a contig. Pair (TGTCTATATAAGCGTATCAAC - CTGCATTCTTGGATTATGTCT) on contig 31 (872282 nt) Astart:620495 Aend:620516 Bstart:634875 Bend:634854 CALCULATED DISTANCE APART: 14380 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -1822762 <- tig#2, A=1160670 nt (start:1089717, end:1089738) B=3889777 nt (start:1771809, end:1771788) CALCULATED DISTANCE APART: -1822762 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAGTTTAAAGGATTTAGATGG - ATTATTCACACGTAGCTTATT) on contig 22 (1296783 nt) Astart:477798 Aend:477819 Bstart:492727 Bend:492706 CALCULATED DISTANCE APART: 14929 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#88 -> -710703 <- tig#10, A=242874 nt (start:173420, end:173441) B=2476307 nt (start:661249, end:661228) CALCULATED DISTANCE APART: -710703 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.25 -> -2353772 <- tig#2, B=1894032 nt (start:1769316, end:1769295) A=3889777 nt (start:604456, end:604435) CALCULATED DISTANCE APART: -2353772 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.311 -> -2809451 <- tig#8, B=11765 nt (start:71, end:50) A=2829393 nt (start:2829380, end:2829359) CALCULATED DISTANCE APART: -2809451 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.66 -> -1122493 <- tig#4, B=365505 nt (start:75457, end:75436) A=3700243 nt (start:1067036, end:1067015) CALCULATED DISTANCE APART: -1122493 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#155 -> -33963 <- tig#r.99, A=83971 nt (start:53653, end:53674) B=184228 nt (start:160583, end:160604) CALCULATED DISTANCE APART: -33963 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATTGCATTGTTTTGGAATTGG - GCAATTCGTCCCTCTCTTCGC) on contig 8 (2829393 nt) Astart:2027643 Aend:2027622 Bstart:2011696 Bend:2011717 CALCULATED DISTANCE APART: 15947 Pairs unsatisfied in distance within a contig. Pair (ATCGCATTGTATATTGTACCG - CTCTTCAACATAGTTTTCCTC) on contig 7 (3089900 nt) Astart:2283904 Aend:2283925 Bstart:2295296 Bend:2295275 CALCULATED DISTANCE APART: 11392 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#92 -> -1138453 <- tig#48, A=204193 nt (start:101121, end:101142) B=1252891 nt (start:1055381, end:1055360) CALCULATED DISTANCE APART: -1138453 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#1 -> -4576864 <- tig#28, A=4799971 nt (start:734956, end:734977) B=916743 nt (start:531849, end:531828) CALCULATED DISTANCE APART: -4576864 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -420820 <- tig#3, A=722869 nt (start:625196, end:625217) B=3848698 nt (start:343147, end:343126) CALCULATED DISTANCE APART: -420820 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#4 -> -3104756 <- tig#r.14, A=3700243 nt (start:1661064, end:1661085) B=2017548 nt (start:931971, end:931992) CALCULATED DISTANCE APART: -3104756 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#64 -> -257608 <- tig#390, A=462404 nt (start:187344, end:187365) B=4769 nt (start:2548, end:2527) CALCULATED DISTANCE APART: -257608 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#47 -> -106504 <- tig#r.108, A=618158 nt (start:600285, end:600306) B=149705 nt (start:41074, end:41095) CALCULATED DISTANCE APART: -106504 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GATATAAACTGAATACATGTC - CATCGTTTTGACGTTTGAAAA) on contig 16 (1744109 nt) Astart:1071675 Aend:1071696 Bstart:1074578 Bend:1074599 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.119 -> -395902 <- tig#38, B=136757 nt (start:30505, end:30484) A=738226 nt (start:385397, end:385376) CALCULATED DISTANCE APART: -395902 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#154 -> -185253 <- tig#7, B=84292 nt (start:65527, end:65548) A=3089900 nt (start:186488, end:186467) CALCULATED DISTANCE APART: -185253 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#74 -> -1800582 <- tig#14, B=317083 nt (start:39477, end:39498) A=2017548 nt (start:1542976, end:1542955) CALCULATED DISTANCE APART: -1800582 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#11 -> -1747344 <- tig#6, A=2258275 nt (start:1014835, end:1014856) B=3988516 nt (start:523904, end:523883) CALCULATED DISTANCE APART: -1747344 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#150 -> -1589254 <- tig#8, A=91302 nt (start:84760, end:84781) B=2829393 nt (start:1602712, end:1602691) CALCULATED DISTANCE APART: -1589254 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#12 -> -2378536 <- tig#66, A=4252320 nt (start:1920991, end:1921012) B=365505 nt (start:67207, end:67186) CALCULATED DISTANCE APART: -2378536 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.26 -> -3452743 <- tig#9, B=1140087 nt (start:1012068, end:1012047) A=2687965 nt (start:2460675, end:2460654) CALCULATED DISTANCE APART: -3452743 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#1 -> -2507464 <- tig#r.6, A=4799971 nt (start:3971262, end:3971283) B=3988516 nt (start:2289761, end:2289782) CALCULATED DISTANCE APART: -2507464 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#46 -> -816349 <- tig#19, B=658085 nt (start:34533, end:34554) A=1545896 nt (start:212797, end:212776) CALCULATED DISTANCE APART: -816349 < -2000 Pairs unsatisfied in distance within a contig. Pair (CATTTAATCTCAGTCATATGT - TCCCACGCAACCTGTAATAAT) on contig 28 (916743 nt) Astart:208066 Aend:208045 Bstart:190109 Bend:190130 CALCULATED DISTANCE APART: 17957 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.48 -> -535355 <- tig#49, B=1252891 nt (start:329407, end:329386) A=529875 nt (start:225948, end:225927) CALCULATED DISTANCE APART: -535355 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#5 -> -4069054 <- tig#20, A=3413765 nt (start:465647, end:465668) B=1524840 nt (start:1140936, end:1140915) CALCULATED DISTANCE APART: -4069054 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#498 -> -571465 <- tig#14, B=1853 nt (start:490, end:511) A=2017548 nt (start:590102, end:590081) CALCULATED DISTANCE APART: -571465 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -1042516 <- tig#r.41, A=2017548 nt (start:1493177, end:1493198) B=710158 nt (start:172013, end:172034) CALCULATED DISTANCE APART: -1042516 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTGCGTTTTGACCTGAGTGAA - CTAAACAAAATGGAAAGTGTC) on contig 35 (828437 nt) Astart:670003 Aend:670024 Bstart:683584 Bend:683563 CALCULATED DISTANCE APART: 13581 Pairs unsatisfied in distance within a contig. Pair (AAATAAAATAAAGATAATTAT - GGAAACACACCTCTCCATCTA) on contig 25 (1894032 nt) Astart:11916 Aend:11937 Bstart:29374 Bend:29353 CALCULATED DISTANCE APART: 17458 Pairs unsatisfied in pairing logic within a contig. Pair (TTAAGGTAACAACCAGTACAA - ATTTTTTTTATTTTTTTTCTT) on contig 5 (3413765 nt) Astart:511263 Aend:511284 Bstart:2989133 Bend:2989154 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.14 -> -1963928 <- tig#12, B=2017548 nt (start:744274, end:744253) A=4252320 nt (start:1239654, end:1239633) CALCULATED DISTANCE APART: -1963928 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TAACCTTGATATAGTTAAATA - ATGGCCCTAGTAATTTTTGAA) on contig 18 (1637738 nt) Astart:1176623 Aend:1176602 Bstart:1168726 Bend:1168705 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.25 -> -844410 <- tig#29, B=1894032 nt (start:502951, end:502930) A=906229 nt (start:361459, end:361438) CALCULATED DISTANCE APART: -844410 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.54 -> -281671 <- tig#56, B=495878 nt (start:42206, end:42185) A=468413 nt (start:259465, end:259444) CALCULATED DISTANCE APART: -281671 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#6 -> -4637254 <- tig#3, B=3988516 nt (start:423171, end:423192) A=3848698 nt (start:1091909, end:1091888) CALCULATED DISTANCE APART: -4637254 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#102 -> -220721 <- tig#r.80, A=163766 nt (start:131648, end:131669) B=282893 nt (start:74290, end:74311) CALCULATED DISTANCE APART: -220721 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#231 -> -40269 <- tig#175, A=32185 nt (start:13455, end:13476) B=64049 nt (start:41539, end:41518) CALCULATED DISTANCE APART: -40269 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#3 -> -3662425 <- tig#65, B=3848698 nt (start:287477, end:287498) A=411873 nt (start:121204, end:121183) CALCULATED DISTANCE APART: -3662425 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.40 -> -2320671 <- tig#1, B=717909 nt (start:414915, end:414894) A=4799971 nt (start:1925756, end:1925735) CALCULATED DISTANCE APART: -2320671 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#8 -> -2327370 <- tig#2, B=2829393 nt (start:714722, end:714743) A=3889777 nt (start:232699, end:232678) CALCULATED DISTANCE APART: -2327370 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.12 -> -3928444 <- tig#30, B=4252320 nt (start:3287950, end:3287929) A=874307 nt (start:660494, end:660473) CALCULATED DISTANCE APART: -3928444 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#53 -> -2130880 <- tig#r.14, A=487180 nt (start:77703, end:77724) B=2017548 nt (start:276145, end:276166) CALCULATED DISTANCE APART: -2130880 < -2000 Pairs unsatisfied in distance within a contig. Pair (ACTTTGTGGTTAGGTGATTAT - CTTGTCCATTTTTAATGGGCT) on contig 9 (2687965 nt) Astart:958279 Aend:958258 Bstart:941007 Bend:941028 CALCULATED DISTANCE APART: 17272 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -2115294 <- tig#3, B=2829393 nt (start:1183663, end:1183642) A=3848698 nt (start:951631, end:951610) CALCULATED DISTANCE APART: -2115294 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.5 -> -2815192 <- tig#3, B=3413765 nt (start:1947775, end:1947754) A=3848698 nt (start:887417, end:887396) CALCULATED DISTANCE APART: -2815192 < -2000 Pairs unsatisfied in distance within a contig. Pair (CCTACTTCATTTTAGTCCATA - TTGTTTTTTTTTTTCAATTGT) on contig 14 (2017548 nt) Astart:1448507 Aend:1448528 Bstart:1461065 Bend:1461044 CALCULATED DISTANCE APART: 12558 Pairs unsatisfied in pairing logic within a contig. Pair (TTAATATGGTCTGATTTCTGG - TTGGTGGAATTCTCAGCTGTG) on contig 6 (3988516 nt) Astart:3476648 Aend:3476669 Bstart:3476319 Bend:3476340 Pairs unsatisfied in distance within a contig. Pair (TGTGCAATGGTGATGATATGT - TTAATAATTTAATAGGTGAAG) on contig 8 (2829393 nt) Astart:2027541 Aend:2027520 Bstart:2011600 Bend:2011621 CALCULATED DISTANCE APART: 15941 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#9 -> -3054771 <- tig#11, A=2687965 nt (start:1297090, end:1297111) B=2258275 nt (start:1683896, end:1683875) CALCULATED DISTANCE APART: -3054771 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#10 -> -1216110 <- tig#27, B=2476307 nt (start:2137470, end:2137491) A=1116231 nt (start:897273, end:897252) CALCULATED DISTANCE APART: -1216110 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#3 -> -3201851 <- tig#12, B=3848698 nt (start:880965, end:880986) A=4252320 nt (start:254118, end:254097) CALCULATED DISTANCE APART: -3201851 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.31 -> -387801 <- tig#856, B=872282 nt (start:407481, end:407460) A=1096 nt (start:320, end:299) CALCULATED DISTANCE APART: -387801 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AAAAATCTTTCTCAACTACAT - TCCTCTTTCTGGATCATAATC) on contig 6 (3988516 nt) Astart:1955312 Aend:1955333 Bstart:1980265 Bend:1980286 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#4 -> -3498013 <- tig#11, B=3700243 nt (start:1485781, end:1485802) A=2258275 nt (start:1303551, end:1303530) CALCULATED DISTANCE APART: -3498013 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#42 -> -1065090 <- tig#38, B=702743 nt (start:63138, end:63159) A=738226 nt (start:445485, end:445464) CALCULATED DISTANCE APART: -1065090 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATAAAGCCGTCAATGAGGACA - TATGGTAATCGAACAAAATTA) on contig 13 (2095837 nt) Astart:1776360 Aend:1776381 Bstart:1791161 Bend:1791140 CALCULATED DISTANCE APART: 14801 Pairs unsatisfied in distance within a contig. Pair (TTATTAGAATGCGATTTTGGG - TAATATTTTTATTTGCTAATA) on contig 11 (2258275 nt) Astart:1717555 Aend:1717576 Bstart:1734701 Bend:1734680 CALCULATED DISTANCE APART: 17146 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.106 -> -226137 <- tig#90, B=156668 nt (start:36349, end:36328) A=305471 nt (start:209788, end:209767) CALCULATED DISTANCE APART: -226137 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGTCCCTATAGATCAACTTCA - ATTAGTTATACAACAAAATGG) on contig 10 (2476307 nt) Astart:2099783 Aend:2099762 Bstart:2082551 Bend:2082572 CALCULATED DISTANCE APART: 17232 Pairs unsatisfied in pairing logic within a contig. Pair (GTGCAAAGTCATATAGGCGTA - AGAGAATTCGGAGTCTCTCGA) on contig 57 (453946 nt) Astart:121209 Aend:121188 Bstart:123953 Bend:123932 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#162 -> -173984 <- tig#r.73, A=130587 nt (start:102182, end:102203) B=318307 nt (start:152728, end:152749) CALCULATED DISTANCE APART: -173984 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#26 -> -732616 <- tig#104, B=1140087 nt (start:455098, end:455119) A=250374 nt (start:67627, end:67606) CALCULATED DISTANCE APART: -732616 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TCTGAGTGTTGCAGTGGGTCT - GAAGAAAACATAAACGTCAAA) on contig 49 (529875 nt) Astart:384358 Aend:384379 Bstart:396386 Bend:396407 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#1 -> -4497491 <- tig#461, A=4799971 nt (start:283410, end:283431) B=2196 nt (start:930, end:909) CALCULATED DISTANCE APART: -4497491 < -2000 Pairs unsatisfied in distance within a contig. Pair (GGATTTCTTGTTCGTCTCTGG - TATTTCTTTGTTTGAGTCAAG) on contig 33 (1401011 nt) Astart:911535 Aend:911556 Bstart:927252 Bend:927231 CALCULATED DISTANCE APART: 15717 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#29 -> -2634183 <- tig#1, B=906229 nt (start:266645, end:266666) A=4799971 nt (start:2014599, end:2014578) CALCULATED DISTANCE APART: -2634183 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.69 -> -1001985 <- tig#23, B=356702 nt (start:248941, end:248920) A=1298420 nt (start:773044, end:773023) CALCULATED DISTANCE APART: -1001985 < -2000 Pairs unsatisfied in distance within a contig. Pair (ACAAAAATTCAAAGAAGAAGC - ATACGTGCAGTTTCCATTATT) on contig 8 (2829393 nt) Astart:2028386 Aend:2028365 Bstart:2012480 Bend:2012501 CALCULATED DISTANCE APART: 15906 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#6 -> -3043831 <- tig#4, B=3988516 nt (start:1845622, end:1845643) A=3700243 nt (start:920937, end:920916) CALCULATED DISTANCE APART: -3043831 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#15 -> -872928 <- tig#r.82, A=1925218 nt (start:1213328, end:1213349) B=359103 nt (start:178065, end:178086) CALCULATED DISTANCE APART: -872928 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#31 -> -3198549 <- tig#4, A=872282 nt (start:340975, end:340996) B=3700243 nt (start:2687242, end:2687221) CALCULATED DISTANCE APART: -3198549 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -2006994 <- tig#r.76, A=2017548 nt (start:246823, end:246844) B=309514 nt (start:53245, end:53266) CALCULATED DISTANCE APART: -2006994 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#53 -> -2467890 <- tig#r.10, A=487180 nt (start:78030, end:78051) B=2476307 nt (start:397567, end:397588) CALCULATED DISTANCE APART: -2467890 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATCAATAACCACAAGATAAAA - TCATCGTAGTCTTCTCTCCGG) on contig 7 (3089900 nt) Astart:1297588 Aend:1297567 Bstart:1296599 Bend:1296578 Pairs unsatisfied in distance within a contig. Pair (AGCTTATCGATTTAGAGCGAT - ATCTGCTCTTTCCTTTACTTA) on contig 19 (1545896 nt) Astart:289665 Aend:289644 Bstart:278058 Bend:278079 CALCULATED DISTANCE APART: 11607 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.41 -> -63534 <- tig#150, B=710158 nt (start:73549, end:73528) A=91302 nt (start:9985, end:9964) CALCULATED DISTANCE APART: -63534 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGCAACAAACAGGTTTGATAA - ATAGAGTTAAGGAAAACGTTG) on contig 3 (3848698 nt) Astart:2731343 Aend:2731322 Bstart:2719537 Bend:2719516 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#84 -> -2650381 <- tig#8, A=349037 nt (start:256477, end:256498) B=2829393 nt (start:2577821, end:2577800) CALCULATED DISTANCE APART: -2650381 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTTTTGCAACATGTGCCTTTG - ATCAAAATACAGGAGTCCCGA) on contig 84 (349037 nt) Astart:75671 Aend:75650 Bstart:67895 Bend:67874 Pairs unsatisfied in pairing logic within a contig. Pair (GTTGTTGCAACGATGAGTCTC - CTATGATTATATACTAAACAT) on contig 57 (453946 nt) Astart:125906 Aend:125885 Bstart:119466 Bend:119445 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#4 -> -3111822 <- tig#r.1, A=3700243 nt (start:1740182, end:1740203) B=4799971 nt (start:3628210, end:3628231) CALCULATED DISTANCE APART: -3111822 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#4 -> -1036588 <- tig#34, B=3700243 nt (start:3107596, end:3107617) A=868147 nt (start:463941, end:463920) CALCULATED DISTANCE APART: -1036588 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#434 -> -33617 <- tig#r.183, A=2565 nt (start:1490, end:1511) B=55179 nt (start:2637, end:2658) CALCULATED DISTANCE APART: -33617 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#49 -> -520034 <- tig#77, B=529875 nt (start:87309, end:87330) A=306905 nt (start:97468, end:97447) CALCULATED DISTANCE APART: -520034 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTTTTGGATTCGATTATTTTC - GCAGCCATTATGATCCTTCCA) on contig 20 (1524840 nt) Astart:412923 Aend:412944 Bstart:425083 Bend:425062 CALCULATED DISTANCE APART: 12160 Pairs unsatisfied in pairing logic within a contig. Pair (GGAAGTAGGAACTAGTCAAGA - AGAAGGAGGTTAGAATCAAAG) on contig 83 (262564 nt) Astart:197545 Aend:197524 Bstart:196892 Bend:196871 Pairs unsatisfied in pairing logic within a contig. Pair (CAATCCGGTCCTCTGCTCAGA - CTGAGAAAAGCACATAGGTCT) on contig 25 (1894032 nt) Astart:1738821 Aend:1738800 Bstart:1731243 Bend:1731222 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#254 -> -32972 <- tig#131, B=23213 nt (start:22853, end:22874) A=117661 nt (start:52612, end:52591) CALCULATED DISTANCE APART: -32972 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.24 -> -929839 <- tig#77, B=1160670 nt (start:853926, end:853905) A=306905 nt (start:95913, end:95892) CALCULATED DISTANCE APART: -929839 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.6 -> -5512523 <- tig#9, B=3988516 nt (start:3060160, end:3060139) A=2687965 nt (start:2472363, end:2472342) CALCULATED DISTANCE APART: -5512523 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#155 -> -1358996 <- tig#7, A=83971 nt (start:52647, end:52668) B=3089900 nt (start:1347672, end:1347651) CALCULATED DISTANCE APART: -1358996 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -1721947 <- tig#220, B=2687965 nt (start:1740907, end:1740886) A=34786 nt (start:1040, end:1019) CALCULATED DISTANCE APART: -1721947 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.52 -> -640625 <- tig#72, B=490129 nt (start:277372, end:277351) A=488863 nt (start:383253, end:383232) CALCULATED DISTANCE APART: -640625 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#92 -> -141503 <- tig#r.55, A=204193 nt (start:171443, end:171464) B=473235 nt (start:344482, end:344503) CALCULATED DISTANCE APART: -141503 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#10 -> -2036214 <- tig#r.38, A=2476307 nt (start:571670, end:571691) B=738226 nt (start:586649, end:586670) CALCULATED DISTANCE APART: -2036214 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#1 -> -3157383 <- tig#40, A=4799971 nt (start:1682484, end:1682505) B=717909 nt (start:59896, end:59875) CALCULATED DISTANCE APART: -3157383 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#89 -> -180126 <- tig#770, B=343084 nt (start:143191, end:143212) A=1175 nt (start:233, end:212) CALCULATED DISTANCE APART: -180126 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.12 -> -1862334 <- tig#3, B=4252320 nt (start:901511, end:901490) A=3848698 nt (start:980823, end:980802) CALCULATED DISTANCE APART: -1862334 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#76 -> -429126 <- tig#r.90, A=309514 nt (start:76149, end:76170) B=305471 nt (start:89710, end:89731) CALCULATED DISTANCE APART: -429126 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTAGTTGTTGCCTTGGTGGTA - TCGTCGCTGTTGCCACGTGTC) on contig 13 (2095837 nt) Astart:1051797 Aend:1051776 Bstart:1037134 Bend:1037155 CALCULATED DISTANCE APART: 14663 Pairs unsatisfied in distance within a contig. Pair (AATACCGTATGTGCAAGATTT - AAAAAAAAAACTCCTTTATTT) on contig 51 (497268 nt) Astart:415228 Aend:415249 Bstart:432315 Bend:432294 CALCULATED DISTANCE APART: 17087 Pairs unsatisfied in distance within a contig. Pair (ATTGTTTTGGAATTGGGAAGT - TTTCCGCAATTCGTCCCTCTC) on contig 8 (2829393 nt) Astart:2027638 Aend:2027617 Bstart:2011691 Bend:2011712 CALCULATED DISTANCE APART: 15947 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#90 -> -189571 <- tig#64, B=305471 nt (start:250530, end:250551) A=462404 nt (start:154630, end:154609) CALCULATED DISTANCE APART: -189571 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.39 -> -344329 <- tig#26, B=722869 nt (start:161604, end:161583) A=1140087 nt (start:202725, end:202704) CALCULATED DISTANCE APART: -344329 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGGGAAAATGTCGAAAAAACA - CGTGTCATGCAGGAAAACCAG) on contig 6 (3988516 nt) Astart:1140794 Aend:1140773 Bstart:1132770 Bend:1132791 CALCULATED DISTANCE APART: 8024 Pairs unsatisfied in distance within a contig. Pair (AAATAGTTCAGCTATTGATCA - CTTCTTTCGAAATTATTGCTT) on contig 75 (315030 nt) Astart:113441 Aend:113420 Bstart:100112 Bend:100133 CALCULATED DISTANCE APART: 13329 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.104 -> -478543 <- tig#52, B=250374 nt (start:80134, end:80113) A=490129 nt (start:418409, end:418388) CALCULATED DISTANCE APART: -478543 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#5 -> -3829240 <- tig#33, A=3413765 nt (start:467006, end:467027) B=1401011 nt (start:902481, end:902460) CALCULATED DISTANCE APART: -3829240 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#8 -> -3494706 <- tig#15, B=2829393 nt (start:225207, end:225228) A=1925218 nt (start:910520, end:910499) CALCULATED DISTANCE APART: -3494706 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#2 -> -6203045 <- tig#5, B=3889777 nt (start:44495, end:44516) A=3413765 nt (start:2377763, end:2377742) CALCULATED DISTANCE APART: -6203045 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#1 -> -5049978 <- tig#r.9, A=4799971 nt (start:1894549, end:1894570) B=2687965 nt (start:523409, end:523430) CALCULATED DISTANCE APART: -5049978 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CATTCTTGTCCAAATAGGTAT - GAATTCTCCGGACGGGACTCC) on contig 156 (83823 nt) Astart:4186 Aend:4207 Bstart:6022 Bend:6043 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#15 -> -1367673 <- tig#73, B=1925218 nt (start:751703, end:751724) A=318307 nt (start:214158, end:214137) CALCULATED DISTANCE APART: -1367673 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#15 -> -2210933 <- tig#r.4, A=1925218 nt (start:1073242, end:1073263) B=3700243 nt (start:2321286, end:2321307) CALCULATED DISTANCE APART: -2210933 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#26 -> -560724 <- tig#93, A=1140087 nt (start:645034, end:645055) B=203845 nt (start:85671, end:85650) CALCULATED DISTANCE APART: -560724 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#36 -> -2310876 <- tig#25, A=792826 nt (start:233908, end:233929) B=1894032 nt (start:1771958, end:1771937) CALCULATED DISTANCE APART: -2310876 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAGTTTTGCGTCTTCCTTATG - GAAGACGAGCTAATTAGATCT) on contig 31 (872282 nt) Astart:619854 Aend:619875 Bstart:634226 Bend:634205 CALCULATED DISTANCE APART: 14372 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.19 -> -1508767 <- tig#77, B=1545896 nt (start:1408174, end:1408153) A=306905 nt (start:120593, end:120572) CALCULATED DISTANCE APART: -1508767 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ACATTTGTCACAATTTATCTC - TTCATTTGAGCTCGCTGGTGC) on contig 73 (318307 nt) Astart:19390 Aend:19411 Bstart:17926 Bend:17947 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.20 -> -3062641 <- tig#3, B=1524840 nt (start:651360, end:651339) A=3848698 nt (start:2431281, end:2431260) CALCULATED DISTANCE APART: -3062641 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ACAACTGCTTCACCATCGATT - CAATCACCTGAATAAGGATCA) on contig 5 (3413765 nt) Astart:2556172 Aend:2556151 Bstart:2554730 Bend:2554709 Pairs unsatisfied in pairing logic within a contig. Pair (AGCGCATTTACATTCTCATTG - TGGCACTCACTCTTCCATCTT) on contig 25 (1894032 nt) Astart:103405 Aend:103384 Bstart:102452 Bend:102431 Pairs unsatisfied in distance within a contig. Pair (CTCTGACGAATTAGAGATACG - ATAAACACTATGTGGCATAGT) on contig 22 (1296783 nt) Astart:476718 Aend:476739 Bstart:491637 Bend:491616 CALCULATED DISTANCE APART: 14919 Pairs unsatisfied in distance within a contig. Pair (AATGCAGCATTTAGAGAGTTC - AATGTAATATTCTCAAAGATT) on contig 77 (306905 nt) Astart:182797 Aend:182776 Bstart:165281 Bend:165302 CALCULATED DISTANCE APART: 17516 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#154 -> -2826511 <- tig#12, A=84292 nt (start:9052, end:9073) B=4252320 nt (start:2771271, end:2771250) CALCULATED DISTANCE APART: -2826511 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#13 -> -286015 <- tig#51, A=2095837 nt (start:2029449, end:2029470) B=497268 nt (start:239627, end:239606) CALCULATED DISTANCE APART: -286015 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#33 -> -3443356 <- tig#1, A=1401011 nt (start:294482, end:294503) B=4799971 nt (start:2356827, end:2356806) CALCULATED DISTANCE APART: -3443356 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#3 -> -3793391 <- tig#61, B=3848698 nt (start:181274, end:181295) A=407835 nt (start:145967, end:145946) CALCULATED DISTANCE APART: -3793391 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATCGACAACTATTATCGATTA - ATCCCTAAATGTATCACTCGT) on contig 8 (2829393 nt) Astart:1584252 Aend:1584231 Bstart:1566963 Bend:1566942 Pairs unsatisfied in pairing logic within a contig. Pair (GTGTTGTTTTAGTCCTGTAAC - GTTATTGGCAAGGGTCAAATT) on contig 49 (529875 nt) Astart:384219 Aend:384240 Bstart:396528 Bend:396549 Pairs unsatisfied in pairing logic within a contig. Pair (GACTCCTACAGCGAATGAAGC - TCAATGGCATCTTTCTTTAGT) on contig 49 (529875 nt) Astart:383877 Aend:383898 Bstart:396861 Bend:396882 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -2471109 <- tig#13, B=2687965 nt (start:1944277, end:1944298) A=2095837 nt (start:1747421, end:1747400) CALCULATED DISTANCE APART: -2471109 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTACCCGAGTACTGTGCAGCA - GATCTTTAAAAAAAAAAAAAA) on contig 13 (2095837 nt) Astart:1599473 Aend:1599452 Bstart:1586160 Bend:1586181 CALCULATED DISTANCE APART: 13313 Pairs unsatisfied in pairing logic within a contig. Pair (CAAAATTGACAGAGACCAAAA - AATTGTAAAGAGAAAACTCAT) on contig 73 (318307 nt) Astart:307701 Aend:307680 Bstart:303240 Bend:303219 Pairs unsatisfied in distance within a contig. Pair (TCGTGTCTGTGCCATACTAAC - CATAGTGTATGTTACACATTT) on contig 57 (453946 nt) Astart:134863 Aend:134884 Bstart:150489 Bend:150468 CALCULATED DISTANCE APART: 15626 Pairs unsatisfied in distance within a contig. Pair (AACCTATCAAAGGTTTCCAAG - AATGTGTTTTCTTCTTAGGCT) on contig 22 (1296783 nt) Astart:31352 Aend:31331 Bstart:16019 Bend:16040 CALCULATED DISTANCE APART: 15333 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.10 -> -354193 <- tig#26, B=2476307 nt (start:129913, end:129892) A=1140087 nt (start:244280, end:244259) CALCULATED DISTANCE APART: -354193 < -2000 Pairs unsatisfied in distance within a contig. Pair (ACCAAATACTTTTTGATATTG - GACAAGGTCCCTAAATCCACA) on contig 30 (874307 nt) Astart:567132 Aend:567153 Bstart:580110 Bend:580089 CALCULATED DISTANCE APART: 12978 Pairs unsatisfied in distance within a contig. Pair (AAATGTCGAAAAAACATCAAT - AACTTCGTGTCATGCAGGAAA) on contig 6 (3988516 nt) Astart:1140789 Aend:1140768 Bstart:1132765 Bend:1132786 CALCULATED DISTANCE APART: 8024 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#56 -> -2984977 <- tig#6, B=468413 nt (start:450566, end:450587) A=3988516 nt (start:2987130, end:2987109) CALCULATED DISTANCE APART: -2984977 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#90 -> -27155 <- tig#23, A=305471 nt (start:301432, end:301453) B=1298420 nt (start:43116, end:43095) CALCULATED DISTANCE APART: -27155 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#18 -> -1942145 <- tig#19, B=1637738 nt (start:611529, end:611550) A=1545896 nt (start:935936, end:935915) CALCULATED DISTANCE APART: -1942145 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGAGCAACATCACATGACAAC - AAACTTCCTCCGGTGATGATT) on contig 81 (280185 nt) Astart:192111 Aend:192132 Bstart:208881 Bend:208860 CALCULATED DISTANCE APART: 16770 Pairs unsatisfied in pairing logic within a contig. Pair (AAGTCATATAGGCGTACCACT - GCTCTAGAGAATTCGGAGTCT) on contig 57 (453946 nt) Astart:121204 Aend:121183 Bstart:123958 Bend:123937 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#2 -> -3591544 <- tig#r.243, A=3889777 nt (start:295133, end:295154) B=27969 nt (start:11069, end:11090) CALCULATED DISTANCE APART: -3591544 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.67 -> -1088429 <- tig#37, B=362727 nt (start:349104, end:349083) A=792205 nt (start:759325, end:759304) CALCULATED DISTANCE APART: -1088429 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGCAAGAAGTTTTCCTCAGGT - CAGTAGAGTTTGTAAATGATT) on contig 57 (453946 nt) Astart:123704 Aend:123683 Bstart:121586 Bend:121565 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.22 -> -1189125 <- tig#51, B=1296783 nt (start:1171738, end:1171717) A=497268 nt (start:37387, end:37366) CALCULATED DISTANCE APART: -1189125 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.31 -> -2521455 <- tig#9, B=872282 nt (start:341006, end:340985) A=2687965 nt (start:2200449, end:2200428) CALCULATED DISTANCE APART: -2521455 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATGACGAATAAGCCGATTAGA - AAAAAACACAAAAAAACAAAA) on contig 9 (2687965 nt) Astart:1642769 Aend:1642748 Bstart:1373272 Bend:1373293 CALCULATED DISTANCE APART: 269497 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#39 -> -2844710 <- tig#r.12, A=722869 nt (start:625877, end:625898) B=4252320 nt (start:1484602, end:1484623) CALCULATED DISTANCE APART: -2844710 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#30 -> -693850 <- tig#r.5, A=874307 nt (start:585085, end:585106) B=3413765 nt (start:2989137, end:2989158) CALCULATED DISTANCE APART: -693850 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#5 -> -3298868 <- tig#115, A=3413765 nt (start:141244, end:141265) B=139783 nt (start:46347, end:46326) CALCULATED DISTANCE APART: -3298868 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#84 -> -858646 <- tig#45, A=349037 nt (start:136684, end:136705) B=672231 nt (start:666293, end:666272) CALCULATED DISTANCE APART: -858646 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCATGATTGCTTCTTTCTCGT - ACATTTCTAAGCAGACAACCC) on contig 18 (1637738 nt) Astart:1257263 Aend:1257284 Bstart:1274392 Bend:1274371 CALCULATED DISTANCE APART: 17129 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#12 -> -2984044 <- tig#15, A=4252320 nt (start:2860356, end:2860377) B=1925218 nt (start:1612080, end:1612059) CALCULATED DISTANCE APART: -2984044 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#36 -> -605745 <- tig#353, A=792826 nt (start:170384, end:170405) B=6821 nt (start:3303, end:3282) CALCULATED DISTANCE APART: -605745 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTTTGAACATGAATGTTGTTT - TATGAAGTGGGTAGAATCAAA) on contig 54 (495878 nt) Astart:299495 Aend:299516 Bstart:312674 Bend:312653 CALCULATED DISTANCE APART: 13179 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#92 -> -416971 <- tig#r.31, A=204193 nt (start:170396, end:170417) B=872282 nt (start:469108, end:469129) CALCULATED DISTANCE APART: -416971 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#154 -> -103184 <- tig#r.158, A=84292 nt (start:8287, end:8308) B=82523 nt (start:35344, end:35365) CALCULATED DISTANCE APART: -103184 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGATCGAAATGGTATCTGAGT - TTTTGTTTCTTGGGGTATCGT) on contig 33 (1401011 nt) Astart:910337 Aend:910358 Bstart:926037 Bend:926016 CALCULATED DISTANCE APART: 15700 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#3 -> -5532318 <- tig#4, B=3848698 nt (start:1357930, end:1357951) A=3700243 nt (start:3061550, end:3061529) CALCULATED DISTANCE APART: -5532318 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#16 -> -2295954 <- tig#22, A=1744109 nt (start:296555, end:296576) B=1296783 nt (start:868400, end:868379) CALCULATED DISTANCE APART: -2295954 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CATAGCAAGAACCTTTTACCC - CAGTCTGAAGAAATGCTTAAA) on contig 13 (2095837 nt) Astart:1419721 Aend:1419700 Bstart:1422528 Bend:1422507 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#2 -> -3591374 <- tig#140, B=3889777 nt (start:362588, end:362609) A=107496 nt (start:84185, end:84164) CALCULATED DISTANCE APART: -3591374 < -2000 Pairs unsatisfied in distance within a contig. Pair (CACACTCACGGATTATTCTAG - ACCACAACGTCATTTATATCG) on contig 31 (872282 nt) Astart:621623 Aend:621644 Bstart:636035 Bend:636014 CALCULATED DISTANCE APART: 14412 Pairs unsatisfied in pairing logic within a contig. Pair (CTCGCGTGCAAAGTCATATAG - ATTCGGAGTCTCTCGAATCCG) on contig 57 (453946 nt) Astart:121214 Aend:121193 Bstart:123948 Bend:123927 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#33 -> -1524373 <- tig#51, B=1401011 nt (start:216265, end:216286) A=497268 nt (start:359627, end:359606) CALCULATED DISTANCE APART: -1524373 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ACAGAAGCAAGAAGTTTTCCT - GAGTTTGTAAATGATTGGGAT) on contig 57 (453946 nt) Astart:123709 Aend:123688 Bstart:121581 Bend:121560 Pairs unsatisfied in pairing logic within a contig. Pair (TTCCATCTTGCAAACTAGAAG - TTTCCTAAACAAAGTGAAGAC) on contig 1 (4799971 nt) Astart:3563913 Aend:3563892 Bstart:3562501 Bend:3562480 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#45 -> -1273911 <- tig#8, B=672231 nt (start:427171, end:427192) A=2829393 nt (start:1048851, end:1048830) CALCULATED DISTANCE APART: -1273911 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#1 -> -2669824 <- tig#11, A=4799971 nt (start:3676411, end:3676432) B=2258275 nt (start:1566264, end:1566243) CALCULATED DISTANCE APART: -2669824 < -2000 Pairs unsatisfied in distance within a contig. Pair (CACGGCAAAAGATTGCTGTTG - AAAAAAAAAACCTCATAAATG) on contig 21 (1453855 nt) Astart:1357990 Aend:1358011 Bstart:1373680 Bend:1373659 CALCULATED DISTANCE APART: 15690 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#34 -> -279556 <- tig#53, A=868147 nt (start:635698, end:635719) B=487180 nt (start:67107, end:67086) CALCULATED DISTANCE APART: -279556 < -2000 Pairs unsatisfied in distance within a contig. Pair (TATATGTGTGTATTTATTTCG - AATCAAGTACACACTTTCTCT) on contig 56 (468413 nt) Astart:322751 Aend:322772 Bstart:338257 Bend:338236 CALCULATED DISTANCE APART: 15506 Pairs unsatisfied in pairing logic within a contig. Pair (TGCGTAACTTATAAGTTTCTT - AGAAAAAGGCTCAAATCCTAT) on contig 24 (1160670 nt) Astart:65605 Aend:65626 Bstart:66539 Bend:66560 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#36 -> -605745 <- tig#353, A=792826 nt (start:170394, end:170415) B=6821 nt (start:3313, end:3292) CALCULATED DISTANCE APART: -605745 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#31 -> -435079 <- tig#r.915, A=872282 nt (start:417912, end:417933) B=1038 nt (start:329, end:350) CALCULATED DISTANCE APART: -435079 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TAGGAGCGTGCCCGGAGCAAG - CTTCCAACATGTCTGATGCTC) on contig 13 (2095837 nt) Astart:1420635 Aend:1420614 Bstart:1421553 Bend:1421532 Pairs unsatisfied in pairing logic within a contig. Pair (AACATCCTCCTAGAGACTGAA - GGTGATATCGAGATTGACGAA) on contig 19 (1545896 nt) Astart:390604 Aend:390625 Bstart:400930 Bend:400951 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#27 -> -792543 <- tig#71, B=1116231 nt (start:618079, end:618100) A=340153 nt (start:314391, end:314370) CALCULATED DISTANCE APART: -792543 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#33 -> -754521 <- tig#r.53, A=1401011 nt (start:775726, end:775747) B=487180 nt (start:337944, end:337965) CALCULATED DISTANCE APART: -754521 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#52 -> -811536 <- tig#r.26, A=490129 nt (start:371664, end:371685) B=1140087 nt (start:427016, end:427037) CALCULATED DISTANCE APART: -811536 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTGATTATTTGATTTGATTTC - CTCTCTCTCTCAACGCGGTTC) on contig 43 (702740 nt) Astart:40530 Aend:40509 Bstart:13275 Bend:13254 Pairs unsatisfied in pairing logic within a contig. Pair (AAGTCTGAAAACTTTGTGGTC - TACACTAGATACATGAACCAC) on contig 21 (1453855 nt) Astart:158995 Aend:159016 Bstart:174426 Bend:174447 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -1842260 <- tig#14, B=2829393 nt (start:616575, end:616554) A=2017548 nt (start:1245685, end:1245664) CALCULATED DISTANCE APART: -1842260 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.23 -> -1678070 <- tig#9, B=1298420 nt (start:55480, end:55459) A=2687965 nt (start:1642590, end:1642569) CALCULATED DISTANCE APART: -1678070 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.136 -> -206152 <- tig#15, B=206084 nt (start:167073, end:167052) A=1925218 nt (start:59079, end:59058) CALCULATED DISTANCE APART: -206152 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ACAACATTCGTAGAGATTAAT - TTATAAAGATCGAATTTGTTT) on contig 10 (2476307 nt) Astart:2101504 Aend:2101483 Bstart:2095699 Bend:2095678 Pairs unsatisfied in distance within a contig. Pair (GTATATTAGTTGTTGCCTTGG - GCTGTTGCCACGTGTCCCTCC) on contig 13 (2095837 nt) Astart:1051802 Aend:1051781 Bstart:1037139 Bend:1037160 CALCULATED DISTANCE APART: 14663 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#92 -> -418684 <- tig#r.30, A=204193 nt (start:169883, end:169904) B=874307 nt (start:469933, end:469954) CALCULATED DISTANCE APART: -418684 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATAAGCTGTTTCTTAAAATCA - CCATTTCCGTAATCAGAAAAC) on contig 23 (1298420 nt) Astart:282878 Aend:282899 Bstart:297399 Bend:297378 CALCULATED DISTANCE APART: 14521 Pairs unsatisfied in distance within a contig. Pair (TTTTAAATAATTTTGCTTATA - CCCGCAACTCCTCGTTTCATA) on contig 30 (874307 nt) Astart:566360 Aend:566381 Bstart:579060 Bend:579039 CALCULATED DISTANCE APART: 12700 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.48 -> -2037861 <- tig#1, B=1252891 nt (start:979143, end:979122) A=4799971 nt (start:1078718, end:1078697) CALCULATED DISTANCE APART: -2037861 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#5 -> -2355231 <- tig#r.6, A=3413765 nt (start:3092212, end:3092233) B=3988516 nt (start:1934838, end:1934859) CALCULATED DISTANCE APART: -2355231 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTTTTCTACCCTCTTTAAATT - TTAGTATATTTTGGAAAGACC) on contig 36 (792826 nt) Astart:326276 Aend:326297 Bstart:336575 Bend:336596 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#3 -> -5216013 <- tig#5, B=3848698 nt (start:637386, end:637407) A=3413765 nt (start:2024701, end:2024680) CALCULATED DISTANCE APART: -5216013 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#46 -> -126223 <- tig#r.64, A=658085 nt (start:582593, end:582614) B=462404 nt (start:391673, end:391694) CALCULATED DISTANCE APART: -126223 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AAATGCATCTCCTTCGACGAC - GAAATGGACAGGAGAGAGAAT) on contig 150 (91302 nt) Astart:40152 Aend:40131 Bstart:21439 Bend:21418 Pairs unsatisfied in pairing logic within a contig. Pair (AAAACGGTAGCTTGGAGGACA - GTGGCATGGGTGTCGATACTA) on contig 13 (2095837 nt) Astart:1420590 Aend:1420569 Bstart:1421598 Bend:1421577 Pairs unsatisfied in pairing logic within a contig. Pair (CAAATCGTAGAAATACAACAA - ACATTCTAACAAGACCTATAT) on contig 73 (318307 nt) Astart:21229 Aend:21250 Bstart:16049 Bend:16070 Pairs unsatisfied in distance within a contig. Pair (GCTGCTTATATTTCCTAAATT - TTATTTACAGTTTCTTCAGCA) on contig 27 (1116231 nt) Astart:332566 Aend:332587 Bstart:344784 Bend:344763 CALCULATED DISTANCE APART: 12218 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#42 -> -1065090 <- tig#38, B=702743 nt (start:63173, end:63194) A=738226 nt (start:445520, end:445499) CALCULATED DISTANCE APART: -1065090 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#60 -> -440542 <- tig#96, A=677274 nt (start:299618, end:299639) B=190542 nt (start:82886, end:82865) CALCULATED DISTANCE APART: -440542 < -2000 Pairs unsatisfied in distance within a contig. Pair (AATCTCTTTTCTCAATATGAA - AGGCAGAAGAAGCGTCACAGA) on contig 17 (1742883 nt) Astart:1011543 Aend:1011564 Bstart:1026648 Bend:1026627 CALCULATED DISTANCE APART: 15105 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#4 -> -2191389 <- tig#r.708, A=3700243 nt (start:1489931, end:1489952) B=1282 nt (start:205, end:226) CALCULATED DISTANCE APART: -2191389 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -1939741 <- tig#r.132, A=4252320 nt (start:2322617, end:2322638) B=115934 nt (start:85896, end:85917) CALCULATED DISTANCE APART: -1939741 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#7 -> -1857003 <- tig#r.41, A=3089900 nt (start:1839687, end:1839708) B=710158 nt (start:83368, end:83389) CALCULATED DISTANCE APART: -1857003 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#6 -> -3538050 <- tig#38, B=3988516 nt (start:807252, end:807273) A=738226 nt (start:376786, end:376765) CALCULATED DISTANCE APART: -3538050 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.14 -> -2031328 <- tig#88, B=2017548 nt (start:1844155, end:1844134) A=242874 nt (start:207173, end:207152) CALCULATED DISTANCE APART: -2031328 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#62 -> -706548 <- tig#56, A=401410 nt (start:24198, end:24219) B=468413 nt (start:349336, end:349315) CALCULATED DISTANCE APART: -706548 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#21 -> -1028617 <- tig#7, A=1453855 nt (start:453730, end:453751) B=3089900 nt (start:48492, end:48471) CALCULATED DISTANCE APART: -1028617 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GCGTGCCCGGAGCAAGGTGCT - ACAAGCTTCCAACATGTCTGA) on contig 13 (2095837 nt) Astart:1420630 Aend:1420609 Bstart:1421558 Bend:1421537 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -1833682 <- tig#1, B=2687965 nt (start:1509265, end:1509286) A=4799971 nt (start:674982, end:674961) CALCULATED DISTANCE APART: -1833682 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CTTAGTGAATTCTATTCCATT - AAACCATAAAATTCCAAAGAA) on contig 21 (1453855 nt) Astart:162048 Aend:162069 Bstart:171373 Bend:171394 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#23 -> -439032 <- tig#26, B=1298420 nt (start:1044970, end:1044991) A=1140087 nt (start:205582, end:205561) CALCULATED DISTANCE APART: -439032 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#4 -> -1036567 <- tig#34, B=3700243 nt (start:3107723, end:3107744) A=868147 nt (start:464047, end:464026) CALCULATED DISTANCE APART: -1036567 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#42 -> -744047 <- tig#r.10, A=702743 nt (start:507160, end:507181) B=2476307 nt (start:1907843, end:1907864) CALCULATED DISTANCE APART: -744047 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.45 -> -1233379 <- tig#17, B=672231 nt (start:45049, end:45028) A=1742883 nt (start:1208330, end:1208309) CALCULATED DISTANCE APART: -1233379 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.5 -> -3464533 <- tig#16, B=3413765 nt (start:2840242, end:2840221) A=1744109 nt (start:644291, end:644270) CALCULATED DISTANCE APART: -3464533 < -2000 Pairs unsatisfied in distance within a contig. Pair (GAAATGGTATCTGAGTTCAAT - TGGACTTTTGTTTCTTGGGGT) on contig 33 (1401011 nt) Astart:910342 Aend:910363 Bstart:926042 Bend:926021 CALCULATED DISTANCE APART: 15700 Pairs unsatisfied in pairing logic within a contig. Pair (CAACTATTATCGATTATGACA - GCGAAATCCCTAAATGTATCA) on contig 8 (2829393 nt) Astart:1584247 Aend:1584226 Bstart:1566968 Bend:1566947 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#2 -> -4144346 <- tig#24, A=3889777 nt (start:296486, end:296507) B=1160670 nt (start:571055, end:571034) CALCULATED DISTANCE APART: -4144346 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCTTTCTATTTGTTTTTATTG - CAACCGATTATAGACGCTAGA) on contig 24 (1160670 nt) Astart:865746 Aend:865767 Bstart:879682 Bend:879661 CALCULATED DISTANCE APART: 13936 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#44 -> -1546665 <- tig#10, B=693657 nt (start:107210, end:107231) A=2476307 nt (start:980218, end:980197) CALCULATED DISTANCE APART: -1546665 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#21 -> -1636410 <- tig#r.43, A=1453855 nt (start:278425, end:278446) B=702740 nt (start:221760, end:221781) CALCULATED DISTANCE APART: -1636410 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATCAAAAGAAGGCTCATCATG - CGACGATTTTCGGAAGCTTCT) on contig 22 (1296783 nt) Astart:478974 Aend:478995 Bstart:493927 Bend:493906 CALCULATED DISTANCE APART: 14953 Pairs unsatisfied in pairing logic within a contig. Pair (CACCGTTACAGAGAGAGATGA - TTAACGGAGTAACACTTGTGT) on contig 8 (2829393 nt) Astart:769548 Aend:769569 Bstart:791833 Bend:791854 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.76 -> -1046116 <- tig#23, B=309514 nt (start:78088, end:78067) A=1298420 nt (start:988028, end:988007) CALCULATED DISTANCE APART: -1046116 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#177 -> -1429228 <- tig#r.8, A=74766 nt (start:64602, end:64623) B=2829393 nt (start:1390329, end:1390350) CALCULATED DISTANCE APART: -1429228 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.68 -> -2619853 <- tig#7, B=360191 nt (start:46128, end:46107) A=3089900 nt (start:2593725, end:2593704) CALCULATED DISTANCE APART: -2619853 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#15 -> -765534 <- tig#24, A=1925218 nt (start:1691881, end:1691902) B=1160670 nt (start:552197, end:552176) CALCULATED DISTANCE APART: -765534 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTGTCAAAAAAAAACATTCTA - TAACTCCCAACAAACCGGTTT) on contig 11 (2258275 nt) Astart:163397 Aend:163376 Bstart:148647 Bend:148668 CALCULATED DISTANCE APART: 14750 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#188 -> -41792 <- tig#240, B=50331 nt (start:688, end:709) A=29319 nt (start:12149, end:12128) CALCULATED DISTANCE APART: -41792 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.75 -> -2475169 <- tig#9, B=315030 nt (start:34029, end:34008) A=2687965 nt (start:2461140, end:2461119) CALCULATED DISTANCE APART: -2475169 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -925077 <- tig#73, A=2829393 nt (start:1912629, end:1912650) B=318307 nt (start:28313, end:28292) CALCULATED DISTANCE APART: -925077 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#18 -> -1236941 <- tig#24, A=1637738 nt (start:678166, end:678187) B=1160670 nt (start:297369, end:297348) CALCULATED DISTANCE APART: -1236941 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#20 -> -21347 <- tig#237, B=1524840 nt (start:1484511, end:1484532) A=30010 nt (start:1018, end:997) CALCULATED DISTANCE APART: -21347 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#6 -> -3352723 <- tig#10, A=3988516 nt (start:2309167, end:2309188) B=2476307 nt (start:1693374, end:1693353) CALCULATED DISTANCE APART: -3352723 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GATATCTTACGCTCTTCTTTA - TAAACGAATATTCGGATCCAT) on contig 13 (2095837 nt) Astart:1422456 Aend:1422435 Bstart:1419513 Bend:1419492 Pairs unsatisfied in distance within a contig. Pair (GCGTATACAAACTTACTTTTA - TTTTTTAGATACTTATATAAG) on contig 18 (1637738 nt) Astart:1256182 Aend:1256161 Bstart:1238220 Bend:1238241 CALCULATED DISTANCE APART: 17962 Pairs unsatisfied in distance within a contig. Pair (TCTACATAATATTTTTGGACC - TGATCATCGTAAGCGTAGCTG) on contig 12 (4252320 nt) Astart:1981574 Aend:1981553 Bstart:1965675 Bend:1965696 CALCULATED DISTANCE APART: 15899 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#13 -> -890853 <- tig#71, A=2095837 nt (start:1193175, end:1193196) B=340153 nt (start:8191, end:8170) CALCULATED DISTANCE APART: -890853 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.180 -> -120680 <- tig#117, B=60700 nt (start:36026, end:36005) A=138887 nt (start:104654, end:104633) CALCULATED DISTANCE APART: -120680 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#99 -> -29210 <- tig#215, A=184228 nt (start:166747, end:166768) B=36901 nt (start:31729, end:31708) CALCULATED DISTANCE APART: -29210 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGCTGTGGCTACCCTTCGTTT - CTCTGCCTGTTGTGTAAAGCA) on contig 12 (4252320 nt) Astart:741769 Aend:741748 Bstart:736444 Bend:736423 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.25 -> -2353772 <- tig#2, B=1894032 nt (start:1769311, end:1769290) A=3889777 nt (start:604461, end:604440) CALCULATED DISTANCE APART: -2353772 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#15 -> -1928255 <- tig#83, A=1925218 nt (start:36939, end:36960) B=262564 nt (start:59976, end:59955) CALCULATED DISTANCE APART: -1928255 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.21 -> -320735 <- tig#48, B=1453855 nt (start:148383, end:148362) A=1252891 nt (start:192352, end:192331) CALCULATED DISTANCE APART: -320735 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATATTTTATGGATTTTACATT - TCGTATGATGTGTACTTATTA) on contig 2 (3889777 nt) Astart:3787086 Aend:3787065 Bstart:3779492 Bend:3779471 Pairs unsatisfied in pairing logic within a contig. Pair (AATTTTGGGTCACTTACGGAA - TTAGCTCTGTTTCTTATTATG) on contig 19 (1545896 nt) Astart:390489 Aend:390510 Bstart:401052 Bend:401073 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#15 -> -2380173 <- tig#8, B=1925218 nt (start:1269694, end:1269715) A=2829393 nt (start:1744649, end:1744628) CALCULATED DISTANCE APART: -2380173 < -2000 Pairs unsatisfied in distance within a contig. Pair (CCACAAGAGATTGGAGAGTTC - ATTTCGTCATTTATTGTCCTC) on contig 37 (792205 nt) Astart:409407 Aend:409386 Bstart:399292 Bend:399313 CALCULATED DISTANCE APART: 10115 Pairs unsatisfied in distance within a contig. Pair (AAGAACGGGGTTGGGAGAAGT - TTTGTGTGAGACTTATCTCGA) on contig 22 (1296783 nt) Astart:968133 Aend:968112 Bstart:954128 Bend:954149 CALCULATED DISTANCE APART: 14005 Pairs unsatisfied in distance within a contig. Pair (AATACAATTATAATATTATTA - TTTTTTTGTTTTAACTATTTG) on contig 7 (3089900 nt) Astart:692168 Aend:692189 Bstart:692372 Bend:692351 CALCULATED DISTANCE APART: 204 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -1982281 <- tig#9, B=916743 nt (start:294801, end:294822) A=2687965 nt (start:1380339, end:1380318) CALCULATED DISTANCE APART: -1982281 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#38 -> -1543729 <- tig#10, B=738226 nt (start:114423, end:114444) A=2476307 nt (start:939926, end:939905) CALCULATED DISTANCE APART: -1543729 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.166 -> -120150 <- tig#117, B=75506 nt (start:35654, end:35633) A=138887 nt (start:104496, end:104475) CALCULATED DISTANCE APART: -120150 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#23 -> -4082037 <- tig#r.6, A=1298420 nt (start:255992, end:256013) B=3988516 nt (start:928907, end:928928) CALCULATED DISTANCE APART: -4082037 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#4 -> -1283116 <- tig#r.15, A=3700243 nt (start:3619447, end:3619468) B=1925218 nt (start:702898, end:702919) CALCULATED DISTANCE APART: -1283116 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTTCTCCCACTTGTTGTTGTT - AGTCAATTTACAATCTCAACC) on contig 3 (3848698 nt) Astart:297960 Aend:297981 Bstart:311933 Bend:311954 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#150 -> -1589254 <- tig#8, A=91302 nt (start:84765, end:84786) B=2829393 nt (start:1602717, end:1602696) CALCULATED DISTANCE APART: -1589254 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GGAGAATCTTGTGCTTATTAT - GGAGATCCTGCCTGCTGATGC) on contig 24 (1160670 nt) Astart:65560 Aend:65581 Bstart:66583 Bend:66604 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#16 -> -2627839 <- tig#9, A=1744109 nt (start:1072543, end:1072564) B=2687965 nt (start:1976273, end:1976252) CALCULATED DISTANCE APART: -2627839 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#11 -> -359125 <- tig#16, B=2258275 nt (start:2006510, end:2006531) A=1744109 nt (start:127360, end:127339) CALCULATED DISTANCE APART: -359125 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#78 -> -1307149 <- tig#15, B=303746 nt (start:259053, end:259074) A=1925218 nt (start:1282456, end:1282435) CALCULATED DISTANCE APART: -1307149 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#996 -> -1053321 <- tig#10, A=908 nt (start:654, end:675) B=2476307 nt (start:1073067, end:1073046) CALCULATED DISTANCE APART: -1053321 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#10 -> -872733 <- tig#33, A=2476307 nt (start:1641471, end:1641492) B=1401011 nt (start:57897, end:57876) CALCULATED DISTANCE APART: -872733 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.68 -> -2619853 <- tig#7, B=360191 nt (start:46133, end:46112) A=3089900 nt (start:2593720, end:2593699) CALCULATED DISTANCE APART: -2619853 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.31 -> -952971 <- tig#13, B=872282 nt (start:279693, end:279672) A=2095837 nt (start:693278, end:693257) CALCULATED DISTANCE APART: -952971 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -3546059 <- tig#r.72, A=4252320 nt (start:941969, end:941990) B=488863 nt (start:233155, end:233176) CALCULATED DISTANCE APART: -3546059 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.4 -> -1054887 <- tig#1, B=3700243 nt (start:388468, end:388447) A=4799971 nt (start:686419, end:686398) CALCULATED DISTANCE APART: -1054887 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#45 -> -1313446 <- tig#22, B=672231 nt (start:102200, end:102221) A=1296783 nt (start:763415, end:763394) CALCULATED DISTANCE APART: -1313446 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#92 -> -1531235 <- tig#8, A=204193 nt (start:170325, end:170346) B=2829393 nt (start:1517367, end:1517346) CALCULATED DISTANCE APART: -1531235 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TCATCATCGACAACTATTATC - TAAATGTATCACTCGTCTTCC) on contig 8 (2829393 nt) Astart:1584257 Aend:1584236 Bstart:1566958 Bend:1566937 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#16 -> -1855537 <- tig#33, A=1744109 nt (start:1248871, end:1248892) B=1401011 nt (start:1380299, end:1380278) CALCULATED DISTANCE APART: -1855537 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#16 -> -784237 <- tig#203, A=1744109 nt (start:962973, end:962994) B=41763 nt (start:23101, end:23080) CALCULATED DISTANCE APART: -784237 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#30 -> -3059 <- tig#r.50, A=874307 nt (start:851515, end:851536) B=498313 nt (start:498046, end:498067) CALCULATED DISTANCE APART: -3059 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CATTTTTTTTCTACCCTCTTT - ATATTTTGGAAAGACCACATA) on contig 36 (792826 nt) Astart:326271 Aend:326292 Bstart:336580 Bend:336601 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#18 -> -362994 <- tig#8, B=1637738 nt (start:1473707, end:1473728) A=2829393 nt (start:218963, end:218942) CALCULATED DISTANCE APART: -362994 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTGATTTTACTGATTTCAATG - TCCCAACACTAGTACCAAATA) on contig 63 (393958 nt) Astart:15890 Aend:15911 Bstart:24742 Bend:24721 CALCULATED DISTANCE APART: 8852 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#3 -> -3266860 <- tig#32, A=3848698 nt (start:1465488, end:1465509) B=1165067 nt (start:903650, end:903629) CALCULATED DISTANCE APART: -3266860 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#536 -> -340036 <- tig#51, B=1682 nt (start:240, end:261) A=497268 nt (start:358594, end:358573) CALCULATED DISTANCE APART: -340036 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#31 -> -399117 <- tig#3, A=872282 nt (start:619869, end:619890) B=3848698 nt (start:166704, end:166683) CALCULATED DISTANCE APART: -399117 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -1556193 <- tig#2, B=2829393 nt (start:421479, end:421458) A=3889777 nt (start:1154714, end:1154693) CALCULATED DISTANCE APART: -1556193 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#45 -> -272071 <- tig#r.891, A=672231 nt (start:380414, end:380435) B=1061 nt (start:807, end:828) CALCULATED DISTANCE APART: -272071 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#4 -> -1008989 <- tig#44, A=3700243 nt (start:2932336, end:2932357) B=693657 nt (start:261082, end:261061) CALCULATED DISTANCE APART: -1008989 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GTTTTAGTCCTGTAACTTGAA - GTAAGGTTATTGGCAAGGGTC) on contig 49 (529875 nt) Astart:384224 Aend:384245 Bstart:396523 Bend:396544 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#19 -> -1846736 <- tig#r.1, A=1545896 nt (start:857686, end:857707) B=4799971 nt (start:3621445, end:3621466) CALCULATED DISTANCE APART: -1846736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#2 -> -1251967 <- tig#r.98, A=3889777 nt (start:2684568, end:2684589) B=186419 nt (start:119661, end:119682) CALCULATED DISTANCE APART: -1251967 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#38 -> -158657 <- tig#150, B=738226 nt (start:568085, end:568106) A=91302 nt (start:8516, end:8495) CALCULATED DISTANCE APART: -158657 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TCCGGAAGAAAAAACCAGGTC - TTATTTATTTTTATGTCAGTT) on contig 31 (872282 nt) Astart:299300 Aend:299279 Bstart:279401 Bend:279380 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#58 -> -565010 <- tig#45, B=439424 nt (start:42106, end:42127) A=672231 nt (start:187692, end:187671) CALCULATED DISTANCE APART: -565010 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#4 -> -2298549 <- tig#126, A=3700243 nt (start:1489941, end:1489962) B=181891 nt (start:108247, end:108226) CALCULATED DISTANCE APART: -2298549 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.23 -> -1145194 <- tig#3, B=1298420 nt (start:55480, end:55459) A=3848698 nt (start:1109714, end:1109693) CALCULATED DISTANCE APART: -1145194 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GCTGGTTCTGCTTCTGCTGAG - GTGCTTTTGGTTTTGGCAAAG) on contig 6 (3988516 nt) Astart:3476971 Aend:3476992 Bstart:3475971 Bend:3475992 Pairs unsatisfied in pairing logic within a contig. Pair (CTTATGTTTGTATGTGTGTTT - ATGCTAAACTAGATATTCAAA) on contig 4 (3700243 nt) Astart:539569 Aend:539590 Bstart:539908 Bend:539929 Pairs unsatisfied in pairing logic within a contig. Pair (AATGAAGATTGTGCATGATGT - CAAAGTTTGAGAAGAAAGGTT) on contig 12 (4252320 nt) Astart:477397 Aend:477376 Bstart:465237 Bend:465216 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#11 -> -2044197 <- tig#17, B=2258275 nt (start:1084798, end:1084819) A=1742883 nt (start:890720, end:890699) CALCULATED DISTANCE APART: -2044197 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#36 -> -605745 <- tig#353, A=792826 nt (start:170389, end:170410) B=6821 nt (start:3308, end:3287) CALCULATED DISTANCE APART: -605745 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#2 -> -5375953 <- tig#r.1, A=3889777 nt (start:2480887, end:2480908) B=4799971 nt (start:812908, end:812929) CALCULATED DISTANCE APART: -5375953 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#195 -> -76171 <- tig#61, A=47055 nt (start:8270, end:8291) B=407835 nt (start:57386, end:57365) CALCULATED DISTANCE APART: -76171 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#52 -> -475895 <- tig#r.108, A=490129 nt (start:50041, end:50062) B=149705 nt (start:93898, end:93919) CALCULATED DISTANCE APART: -475895 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#996 -> -5830 <- tig#r.205, A=908 nt (start:650, end:671) B=41546 nt (start:15974, end:15995) CALCULATED DISTANCE APART: -5830 < -2000 Pairs unsatisfied in distance within a contig. Pair (GCTGAAAGCTTTGAATCATCT - AAGTTCCCAGTCGTATCGTTA) on contig 33 (1401011 nt) Astart:1392722 Aend:1392701 Bstart:1377246 Bend:1377267 CALCULATED DISTANCE APART: 15476 Pairs unsatisfied in distance within a contig. Pair (ATAAAAACCAGCTTTTATGGC - CAAGTAAAGTAACCTAGTTTC) on contig 5 (3413765 nt) Astart:2091029 Aend:2091050 Bstart:2108489 Bend:2108468 CALCULATED DISTANCE APART: 17460 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#37 -> -981402 <- tig#25, B=792205 nt (start:494368, end:494389) A=1894032 nt (start:703565, end:703544) CALCULATED DISTANCE APART: -981402 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#1 -> -4075377 <- tig#37, A=4799971 nt (start:1044256, end:1044277) B=792205 nt (start:339662, end:339641) CALCULATED DISTANCE APART: -4075377 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATCCTTAATGTGAATGCGAAC - AGCATAGTATCGAAAACCTTG) on contig 72 (488863 nt) Astart:470097 Aend:470076 Bstart:456489 Bend:456510 CALCULATED DISTANCE APART: 13608 Pairs unsatisfied in pairing logic within a contig. Pair (TCATTCCCTGATTTGGTCAGA - ATTGGTCACTCGATGGGTTGG) on contig 21 (1453855 nt) Astart:158912 Aend:158933 Bstart:174510 Bend:174531 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#68 -> -543194 <- tig#82, A=360191 nt (start:109780, end:109801) B=359103 nt (start:312783, end:312762) CALCULATED DISTANCE APART: -543194 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#16 -> -4266474 <- tig#4, B=1744109 nt (start:1018025, end:1018046) A=3700243 nt (start:3560390, end:3560369) CALCULATED DISTANCE APART: -4266474 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAATTAATGCAAAGGCCATTG - TCGTGTTGTTTGAGACGAGAT) on contig 3 (3848698 nt) Astart:1309928 Aend:1309907 Bstart:1294129 Bend:1294150 CALCULATED DISTANCE APART: 15799 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#30 -> -1537994 <- tig#48, A=874307 nt (start:506112, end:506133) B=1252891 nt (start:1189799, end:1189778) CALCULATED DISTANCE APART: -1537994 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGCTTCTTGAACATGACTGAA - ACTAAGTGAATCAGTTTAGTA) on contig 121 (133105 nt) Astart:103607 Aend:103628 Bstart:126810 Bend:126831 Pairs unsatisfied in distance within a contig. Pair (TCTAGATGGAATAAGACACTC - TAAAGGATGCGACGAAGCTCC) on contig 51 (497268 nt) Astart:415680 Aend:415701 Bstart:432703 Bend:432682 CALCULATED DISTANCE APART: 17023 Pairs unsatisfied in distance within a contig. Pair (AAAAGAAACGTAGAAATAAAA - TGGCCATAGGATTATGCATCA) on contig 54 (495878 nt) Astart:114484 Aend:114505 Bstart:127611 Bend:127590 CALCULATED DISTANCE APART: 13127 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#26 -> -878095 <- tig#r.70, A=1140087 nt (start:272932, end:272953) B=350721 nt (start:319781, end:319802) CALCULATED DISTANCE APART: -878095 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#36 -> -1632661 <- tig#1, B=792826 nt (start:752075, end:752096) A=4799971 nt (start:1611910, end:1611889) CALCULATED DISTANCE APART: -1632661 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#42 -> -1065009 <- tig#38, B=702743 nt (start:63866, end:63887) A=738226 nt (start:446132, end:446111) CALCULATED DISTANCE APART: -1065009 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#16 -> -4170072 <- tig#4, B=1744109 nt (start:1184417, end:1184438) A=3700243 nt (start:3630380, end:3630359) CALCULATED DISTANCE APART: -4170072 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.4 -> -1950731 <- tig#52, B=3700243 nt (start:1588696, end:1588675) A=490129 nt (start:382035, end:382014) CALCULATED DISTANCE APART: -1950731 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTATTTCGTGAGCTACATAAA - TTCAATAATTATTCAATTGCT) on contig 2 (3889777 nt) Astart:3422120 Aend:3422099 Bstart:3405085 Bend:3405106 CALCULATED DISTANCE APART: 17035 Pairs unsatisfied in distance within a contig. Pair (CAGTTTAGCTATGGTTGACTA - AACTAAAGACACCGAATTGAC) on contig 8 (2829393 nt) Astart:2027505 Aend:2027484 Bstart:2011564 Bend:2011585 CALCULATED DISTANCE APART: 15941 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#39 -> -1863379 <- tig#2, B=722869 nt (start:317221, end:317242) A=3889777 nt (start:1477731, end:1477710) CALCULATED DISTANCE APART: -1863379 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#136 -> -4105725 <- tig#r.6, A=206084 nt (start:40432, end:40453) B=3988516 nt (start:28443, end:28464) CALCULATED DISTANCE APART: -4105725 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#26 -> -1598640 <- tig#r.15, A=1140087 nt (start:846181, end:846202) B=1925218 nt (start:600484, end:600505) CALCULATED DISTANCE APART: -1598640 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -2377123 <- tig#r.51, A=4252320 nt (start:2321213, end:2321234) B=497268 nt (start:31252, end:31273) CALCULATED DISTANCE APART: -2377123 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#15 -> -1874021 <- tig#r.21, A=1925218 nt (start:795010, end:795031) B=1453855 nt (start:690042, end:690063) CALCULATED DISTANCE APART: -1874021 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.117 -> -59066 <- tig#175, B=138887 nt (start:70108, end:70087) A=64049 nt (start:8958, end:8937) CALCULATED DISTANCE APART: -59066 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.53 -> -668544 <- tig#46, B=487180 nt (start:387578, end:387557) A=658085 nt (start:300966, end:300945) CALCULATED DISTANCE APART: -668544 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGTATGACTTACTATTATAGA - CTAAAAACAAGCATAACACAA) on contig 21 (1453855 nt) Astart:1401603 Aend:1401582 Bstart:1384012 Bend:1383991 Pairs unsatisfied in pairing logic within a contig. Pair (AATCATCATTGTGGGAGTGTT - TTCCGACCAACCCTCGCACAA) on contig 25 (1894032 nt) Astart:1736751 Aend:1736730 Bstart:1733283 Bend:1733262 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#118 -> -766460 <- tig#29, A=136784 nt (start:75888, end:75909) B=906229 nt (start:725564, end:725543) CALCULATED DISTANCE APART: -766460 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#1 -> -4497503 <- tig#461, A=4799971 nt (start:283718, end:283739) B=2196 nt (start:1250, end:1229) CALCULATED DISTANCE APART: -4497503 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#20 -> -296822 <- tig#79, B=1524840 nt (start:1383232, end:1383253) A=300950 nt (start:175214, end:175193) CALCULATED DISTANCE APART: -296822 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTGTCCTGACGATAACTCCTA - GATGCAATAAAGAGATGATAA) on contig 24 (1160670 nt) Astart:812720 Aend:812699 Bstart:767856 Bend:767877 CALCULATED DISTANCE APART: 44864 Pairs unsatisfied in distance within a contig. Pair (AAATCTTTGATTGGGGGAAAC - GGACAATGAAGCGAACTTGAT) on contig 48 (1252891 nt) Astart:1235629 Aend:1235650 Bstart:1249802 Bend:1249781 CALCULATED DISTANCE APART: 14173 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#59 -> -2424667 <- tig#7, A=435783 nt (start:201930, end:201951) B=3089900 nt (start:2210814, end:2210793) CALCULATED DISTANCE APART: -2424667 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGGATAAGAACGGGGTTGGGA - GTGAGACTTATCTCGAAAGCA) on contig 22 (1296783 nt) Astart:968138 Aend:968117 Bstart:954133 Bend:954154 CALCULATED DISTANCE APART: 14005 Pairs unsatisfied in distance within a contig. Pair (GATGGAAAGAAAGGAAATAGC - TTTAATTTAGCTTATGGTCAA) on contig 22 (1296783 nt) Astart:477426 Aend:477447 Bstart:492347 Bend:492326 CALCULATED DISTANCE APART: 14921 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#13 -> -1431467 <- tig#37, A=2095837 nt (start:1360431, end:1360452) B=792205 nt (start:716061, end:716040) CALCULATED DISTANCE APART: -1431467 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#237 -> -46997 <- tig#r.85, A=30010 nt (start:13364, end:13385) B=256493 nt (start:206142, end:206163) CALCULATED DISTANCE APART: -46997 < -2000 Pairs unsatisfied in distance within a contig. Pair (GTTTGTGGCTAAACAAAGTAA - CTTTATCCTTTTGAGAAGTGG) on contig 36 (792826 nt) Astart:189422 Aend:189401 Bstart:175785 Bend:175806 CALCULATED DISTANCE APART: 13637 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#50 -> -141613 <- tig#290, B=498313 nt (start:337603, end:337624) A=15580 nt (start:903, end:882) CALCULATED DISTANCE APART: -141613 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#7 -> -3058237 <- tig#9, B=3089900 nt (start:970273, end:970294) A=2687965 nt (start:958610, end:958589) CALCULATED DISTANCE APART: -3058237 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ACAACGCAGCAACCACCAAGC - CAGACGAACAGTTTCCAACTT) on contig 57 (453946 nt) Astart:124027 Aend:124006 Bstart:121279 Bend:121258 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.112 -> -146566 <- tig#60, B=142199 nt (start:111801, end:111780) A=677274 nt (start:54765, end:54744) CALCULATED DISTANCE APART: -146566 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.20 -> -864258 <- tig#156, B=1524840 nt (start:850513, end:850492) A=83823 nt (start:33745, end:33724) CALCULATED DISTANCE APART: -864258 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTTAACCTCTCATTTCTTTGT - TTTAATTTTGAAAGTAATTTG) on contig 4 (3700243 nt) Astart:3271747 Aend:3271726 Bstart:3269973 Bend:3269952 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.1 -> -3232264 <- tig#14, B=4799971 nt (start:2661977, end:2661956) A=2017548 nt (start:590287, end:590266) CALCULATED DISTANCE APART: -3232264 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTTGTGACAAGTCTTTTCATT - CTTGGGTGGCAAGAAACCAGA) on contig 2 (3889777 nt) Astart:1895908 Aend:1895929 Bstart:1911009 Bend:1910988 CALCULATED DISTANCE APART: 15101 Pairs unsatisfied in distance within a contig. Pair (TCTGTGGTCAGCCGGGGTATA - TTACTATCTTGTCTCCCAGAA) on contig 3 (3848698 nt) Astart:692964 Aend:692943 Bstart:677559 Bend:677580 CALCULATED DISTANCE APART: 15405 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#113 -> -635732 <- tig#13, A=142196 nt (start:115288, end:115309) B=2095837 nt (start:628824, end:628803) CALCULATED DISTANCE APART: -635732 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#7 -> -4099751 <- tig#2, A=3089900 nt (start:1839099, end:1839120) B=3889777 nt (start:2868950, end:2868929) CALCULATED DISTANCE APART: -4099751 < -2000 Pairs unsatisfied in distance within a contig. Pair (CGATTTGGGAGGTAAAACGCA - AAGAAACAAGGAATCACTTAC) on contig 1 (4799971 nt) Astart:1025556 Aend:1025535 Bstart:1011208 Bend:1011229 CALCULATED DISTANCE APART: 14348 Pairs unsatisfied in pairing logic within a contig. Pair (GGGATGTATCTGCAAGCATTT - AACATGAATTTGACATTTGTT) on contig 8 (2829393 nt) Astart:1583588 Aend:1583567 Bstart:1567627 Bend:1567606 Pairs unsatisfied in pairing logic within a contig. Pair (AACAGAACCTTACATAAGCAT - ACAAGAAACATAAAAACATCA) on contig 12 (4252320 nt) Astart:1727873 Aend:1727894 Bstart:3886380 Bend:3886401 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.83 -> -2035721 <- tig#8, B=262564 nt (start:68722, end:68701) A=2829393 nt (start:1986999, end:1986978) CALCULATED DISTANCE APART: -2035721 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#39 -> -4172506 <- tig#r.1, A=722869 nt (start:627986, end:628007) B=4799971 nt (start:702348, end:702369) CALCULATED DISTANCE APART: -4172506 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.19 -> -289518 <- tig#72, B=1545896 nt (start:53327, end:53306) A=488863 nt (start:256191, end:256170) CALCULATED DISTANCE APART: -289518 < -2000 Pairs unsatisfied in distance within a contig. Pair (CATGATGATTCCCCGCTTTTG - GGCATGTACGCTTTCTGCCTT) on contig 41 (710158 nt) Astart:677167 Aend:677146 Bstart:665747 Bend:665768 CALCULATED DISTANCE APART: 11420 Pairs unsatisfied in distance within a contig. Pair (AGCTTGAAGAAAGAAAGAAAG - AACTTATGTGCTTGTTTATTT) on contig 7 (3089900 nt) Astart:2332950 Aend:2332971 Bstart:2347230 Bend:2347209 CALCULATED DISTANCE APART: 14280 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3227247 <- tig#6, B=2687965 nt (start:2505352, end:2505331) A=3988516 nt (start:741895, end:741874) CALCULATED DISTANCE APART: -3227247 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.116 -> -824091 <- tig#23, B=139567 nt (start:33327, end:33306) A=1298420 nt (start:810764, end:810743) CALCULATED DISTANCE APART: -824091 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTAAATTTTAATTCATGAAAA - TCAACTGCATTAGCCGCTAAA) on contig 82 (359103 nt) Astart:355808 Aend:355787 Bstart:338316 Bend:338337 CALCULATED DISTANCE APART: 17492 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#2 -> -4569805 <- tig#10, A=3889777 nt (start:293932, end:293953) B=2476307 nt (start:993960, end:993939) CALCULATED DISTANCE APART: -4569805 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TGGATCAATGTTACTCCTTAC - AAGCAACATCTGATGCTGATC) on contig 24 (1160670 nt) Astart:870053 Aend:870074 Bstart:308896 Bend:308917 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -585418 <- tig#49, B=916743 nt (start:584751, end:584772) A=529875 nt (start:273426, end:273405) CALCULATED DISTANCE APART: -585418 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#1 -> -5374372 <- tig#11, B=4799971 nt (start:1641519, end:1641540) A=2258275 nt (start:2235920, end:2235899) CALCULATED DISTANCE APART: -5374372 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#2 -> -1688992 <- tig#29, A=3889777 nt (start:2744383, end:2744404) B=906229 nt (start:563598, end:563577) CALCULATED DISTANCE APART: -1688992 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#90 -> -76809 <- tig#498, A=305471 nt (start:210019, end:210040) B=1853 nt (start:1357, end:1336) CALCULATED DISTANCE APART: -76809 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCATATGATCTTGTTTTTGTG - ATCACCTGCAATGGCATTTGG) on contig 90 (305471 nt) Astart:263919 Aend:263940 Bstart:280856 Bend:280835 CALCULATED DISTANCE APART: 16937 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -1054371 <- tig#4, A=1894032 nt (start:1593297, end:1593318) B=3700243 nt (start:773636, end:773615) CALCULATED DISTANCE APART: -1054371 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#5 -> -1663179 <- tig#72, B=3413765 nt (start:2182045, end:2182066) A=488863 nt (start:451459, end:451438) CALCULATED DISTANCE APART: -1663179 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -1156238 <- tig#43, A=1160670 nt (start:600024, end:600045) B=702740 nt (start:615592, end:615571) CALCULATED DISTANCE APART: -1156238 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTCAACTTCATCGACTCTTCC - AATATCCTGGCATTCAGGTAG) on contig 8 (2829393 nt) Astart:2028478 Aend:2028457 Bstart:2012565 Bend:2012586 CALCULATED DISTANCE APART: 15913 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#10 -> -872684 <- tig#33, A=2476307 nt (start:1640653, end:1640674) B=1401011 nt (start:57030, end:57009) CALCULATED DISTANCE APART: -872684 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GAAGTGGCGGCTGAGATTTTA - ATTATATTTTCATTCCTTCAC) on contig 45 (672231 nt) Astart:445191 Aend:445170 Bstart:433030 Bend:433009 Pairs unsatisfied in distance within a contig. Pair (TTATATGATTAAGTAAGTGGG - GCTTCTTTTATATGGGCTTTA) on contig 3 (3848698 nt) Astart:2532091 Aend:2532112 Bstart:2545516 Bend:2545495 CALCULATED DISTANCE APART: 13425 Pairs unsatisfied in distance within a contig. Pair (CTCCGTCACAACAAAAATTCA - TTTCCATTATTATTTGGTGGA) on contig 8 (2829393 nt) Astart:2028396 Aend:2028375 Bstart:2012490 Bend:2012511 CALCULATED DISTANCE APART: 15906 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#25 -> -2068037 <- tig#r.14, A=1894032 nt (start:1595293, end:1595314) B=2017548 nt (start:228250, end:228271) CALCULATED DISTANCE APART: -2068037 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#24 -> -1165852 <- tig#r.6, A=1160670 nt (start:600049, end:600070) B=3988516 nt (start:3363285, end:3363306) CALCULATED DISTANCE APART: -1165852 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TATCGATTTTGATCGTCATTA - TATCCTATCTTGTAATGAAAA) on contig 5 (3413765 nt) Astart:2634801 Aend:2634780 Bstart:2616399 Bend:2616378 Pairs unsatisfied in distance within a contig. Pair (GAACCGAATATGCATTTCTGT - AATCAATTTCGGACAACTGTT) on contig 13 (2095837 nt) Astart:1776833 Aend:1776854 Bstart:1791637 Bend:1791616 CALCULATED DISTANCE APART: 14804 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#168 -> -583943 <- tig#6, A=74528 nt (start:56931, end:56952) B=3988516 nt (start:586346, end:586325) CALCULATED DISTANCE APART: -583943 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#4 -> -5783209 <- tig#2, A=3700243 nt (start:106012, end:106033) B=3889777 nt (start:2208978, end:2208957) CALCULATED DISTANCE APART: -5783209 < -2000 Pairs unsatisfied in distance within a contig. Pair (ACATTAGCCCCATAAAAGCCT - AGGCGATGGTAGATACAAAGG) on contig 33 (1401011 nt) Astart:910840 Aend:910861 Bstart:926551 Bend:926530 CALCULATED DISTANCE APART: 15711 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#6 -> -3275255 <- tig#7, B=3988516 nt (start:3734259, end:3734280) A=3089900 nt (start:3040998, end:3040977) CALCULATED DISTANCE APART: -3275255 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#18 -> -847191 <- tig#51, B=1637738 nt (start:801462, end:801483) A=497268 nt (start:30915, end:30894) CALCULATED DISTANCE APART: -847191 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#49 -> -328832 <- tig#15, B=529875 nt (start:210779, end:210800) A=1925218 nt (start:29736, end:29715) CALCULATED DISTANCE APART: -328832 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.7 -> -1621141 <- tig#150, B=3089900 nt (start:1633385, end:1633364) A=91302 nt (start:7756, end:7735) CALCULATED DISTANCE APART: -1621141 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.3 -> -2947829 <- tig#19, B=3848698 nt (start:2111921, end:2111900) A=1545896 nt (start:855908, end:855887) CALCULATED DISTANCE APART: -2947829 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#26 -> -1484310 <- tig#19, B=1140087 nt (start:573006, end:573027) A=1545896 nt (start:937229, end:937208) CALCULATED DISTANCE APART: -1484310 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.14 -> -1613226 <- tig#40, B=2017548 nt (start:1087875, end:1087854) A=717909 nt (start:545351, end:545330) CALCULATED DISTANCE APART: -1613226 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GGTGTTCTTGAAGACACTGAG - CCAGATAACCTTGGCACCTTC) on contig 6 (3988516 nt) Astart:2443860 Aend:2443881 Bstart:2451234 Bend:2451255 Pairs unsatisfied in distance within a contig. Pair (CAGTTCCAATCCCAGCCTGCC - TCACGCCTACTCATACACATT) on contig 83 (262564 nt) Astart:180855 Aend:180876 Bstart:198298 Bend:198277 CALCULATED DISTANCE APART: 17443 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.44 -> -1203326 <- tig#1, B=693657 nt (start:536171, end:536150) A=4799971 nt (start:687155, end:687134) CALCULATED DISTANCE APART: -1203326 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#146 -> -1693496 <- tig#r.11, A=173632 nt (start:154514, end:154535) B=2258275 nt (start:563897, end:563918) CALCULATED DISTANCE APART: -1693496 < -2000 Pairs unsatisfied in distance within a contig. Pair (CAAACGATGTCGTTTATGAGC - CGTCTAAAAATTTCACAGGAC) on contig 6 (3988516 nt) Astart:1140608 Aend:1140587 Bstart:1132582 Bend:1132603 CALCULATED DISTANCE APART: 8026 Pairs unsatisfied in distance within a contig. Pair (TGAAACTGTGATAGAGAGATC - GATCCTGCATCAAAAGACATA) on contig 17 (1742883 nt) Astart:1703754 Aend:1703733 Bstart:1689809 Bend:1689830 CALCULATED DISTANCE APART: 13945 Pairs unsatisfied in distance within a contig. Pair (TCATTCACCAAAAGAAAAAAG - AAATGGGTCATTATAAAATCT) on contig 25 (1894032 nt) Astart:330493 Aend:330514 Bstart:348066 Bend:348045 CALCULATED DISTANCE APART: 17573 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#154 -> -77836 <- tig#25, A=84292 nt (start:8328, end:8349) B=1894032 nt (start:21872, end:21851) CALCULATED DISTANCE APART: -77836 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#49 -> -177824 <- tig#215, B=529875 nt (start:334080, end:334101) A=36901 nt (start:2029, end:2008) CALCULATED DISTANCE APART: -177824 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATTTTAAGAAATCTATTTCAA - AAAAATAAACTGTAATTGCGC) on contig 36 (792826 nt) Astart:189357 Aend:189336 Bstart:175719 Bend:175740 CALCULATED DISTANCE APART: 13638 Pairs unsatisfied in distance within a contig. Pair (CTTCATCGACTCTTCCTTGGG - CCATCAATATCCTGGCATTCA) on contig 8 (2829393 nt) Astart:2028473 Aend:2028452 Bstart:2012560 Bend:2012581 CALCULATED DISTANCE APART: 15913 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#85 -> -338018 <- tig#17, A=256493 nt (start:100140, end:100161) B=1742883 nt (start:201665, end:201644) CALCULATED DISTANCE APART: -338018 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAAATACACTCGGGAGTGAAA - CCCGTAAATCACGTCTCCTCC) on contig 13 (2095837 nt) Astart:1051988 Aend:1051967 Bstart:1037324 Bend:1037345 CALCULATED DISTANCE APART: 14664 Pairs unsatisfied in distance within a contig. Pair (GCCCAAGGCAACAACAAGACT - TTATGTACTATTTCAATGTTC) on contig 6 (3988516 nt) Astart:1141012 Aend:1140991 Bstart:1132991 Bend:1133012 CALCULATED DISTANCE APART: 8021 Pairs unsatisfied in distance within a contig. Pair (AACTCGATGACATTGATGGAG - GATTACCTAATCTTCTTTGTG) on contig 22 (1296783 nt) Astart:478118 Aend:478139 Bstart:493055 Bend:493034 CALCULATED DISTANCE APART: 14937 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#10 -> -4388157 <- tig#12, A=2476307 nt (start:621199, end:621220) B=4252320 nt (start:2553049, end:2553028) CALCULATED DISTANCE APART: -4388157 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CAGCCCTGGACTATGAGTAAC - TTGGGCGAGGAGTTACGCTGG) on contig 19 (1545896 nt) Astart:391090 Aend:391111 Bstart:400441 Bend:400462 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.3 -> -2121354 <- tig#26, B=3848698 nt (start:1717576, end:1717555) A=1140087 nt (start:423778, end:423757) CALCULATED DISTANCE APART: -2121354 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.12 -> -2511879 <- tig#52, B=4252320 nt (start:2430944, end:2430923) A=490129 nt (start:100935, end:100914) CALCULATED DISTANCE APART: -2511879 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#193 -> -16226 <- tig#84, B=48386 nt (start:13107, end:13128) A=349037 nt (start:947, end:926) CALCULATED DISTANCE APART: -16226 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAAATTCCAACATAATTTTTT - TTTTGTTCTCCTCCTCCCTTT) on contig 17 (1742883 nt) Astart:1704394 Aend:1704415 Bstart:1721584 Bend:1721563 CALCULATED DISTANCE APART: 17190 Pairs unsatisfied in distance within a contig. Pair (AACCAACAACTTGGTTTGAAA - ATTCATTATTTCAATTTGGTG) on contig 9 (2687965 nt) Astart:2371246 Aend:2371225 Bstart:2353281 Bend:2353302 CALCULATED DISTANCE APART: 17965 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#3 -> -1054930 <- tig#215, B=3848698 nt (start:2776726, end:2776747) A=36901 nt (start:2958, end:2937) CALCULATED DISTANCE APART: -1054930 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.68 -> -2619853 <- tig#7, B=360191 nt (start:46123, end:46102) A=3089900 nt (start:2593730, end:2593709) CALCULATED DISTANCE APART: -2619853 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#2 -> -2279021 <- tig#92, A=3889777 nt (start:1666384, end:1666405) B=204193 nt (start:75628, end:75607) CALCULATED DISTANCE APART: -2279021 < -2000 Pairs unsatisfied in distance within a contig. Pair (GCTGTTTACCCGAGTACTGTG - TTAAAAAAAAAAAAAAAGAAC) on contig 13 (2095837 nt) Astart:1599478 Aend:1599457 Bstart:1586165 Bend:1586186 CALCULATED DISTANCE APART: 13313 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.29 -> -421928 <- tig#62, B=906229 nt (start:111791, end:111770) A=401410 nt (start:330137, end:330116) CALCULATED DISTANCE APART: -421928 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -610980 <- tig#69, A=1894032 nt (start:1594775, end:1594796) B=356702 nt (start:331723, end:331702) CALCULATED DISTANCE APART: -610980 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#9 -> -798128 <- tig#19, A=2687965 nt (start:2659856, end:2659877) B=1545896 nt (start:790019, end:789998) CALCULATED DISTANCE APART: -798128 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#10 -> -1370812 <- tig#r.11, A=2476307 nt (start:1316496, end:1316517) B=2258275 nt (start:2027274, end:2027295) CALCULATED DISTANCE APART: -1370812 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGTTGTGATCTCGGTAACAAA - TTTTTGGATGCTTTTACAATT) on contig 4 (3700243 nt) Astart:539401 Aend:539422 Bstart:540075 Bend:540096 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.89 -> -3944499 <- tig#6, B=343084 nt (start:181420, end:181399) A=3988516 nt (start:3783079, end:3783058) CALCULATED DISTANCE APART: -3944499 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CCCGGAGCAAGGTGCTTTAGT - TCTCAACAAGCTTCCAACATG) on contig 13 (2095837 nt) Astart:1420625 Aend:1420604 Bstart:1421563 Bend:1421542 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#25 -> -2112602 <- tig#r.24, A=1894032 nt (start:709218, end:709239) B=1160670 nt (start:212882, end:212903) CALCULATED DISTANCE APART: -2112602 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -2076777 <- tig#22, A=2829393 nt (start:1404704, end:1404725) B=1296783 nt (start:672088, end:672067) CALCULATED DISTANCE APART: -2076777 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTATCGCGGTCATCTGATGGC - TAAAATCCAGAGAGAGAAAAC) on contig 20 (1524840 nt) Astart:233949 Aend:233928 Bstart:218647 Bend:218668 CALCULATED DISTANCE APART: 15302 Pairs unsatisfied in distance within a contig. Pair (AGCTTCAATAACTCATAAAAG - ACTTTGTACAGCGTAGTATAT) on contig 27 (1116231 nt) Astart:525900 Aend:525879 Bstart:508559 Bend:508580 CALCULATED DISTANCE APART: 17341 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#36 -> -605745 <- tig#353, A=792826 nt (start:170304, end:170325) B=6821 nt (start:3223, end:3202) CALCULATED DISTANCE APART: -605745 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#1 -> -4497503 <- tig#461, A=4799971 nt (start:283723, end:283744) B=2196 nt (start:1255, end:1234) CALCULATED DISTANCE APART: -4497503 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTAATTGGATTTATTTGTTGT - TTAGTTTCTCTCTTCTCTAAA) on contig 31 (872282 nt) Astart:620371 Aend:620392 Bstart:634755 Bend:634734 CALCULATED DISTANCE APART: 14384 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#5 -> -6750381 <- tig#r.6, A=3413765 nt (start:289403, end:289424) B=3988516 nt (start:342497, end:342518) CALCULATED DISTANCE APART: -6750381 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATGCATCGTGTCTGTGCCATA - TGTATGTTACACATTTATGGC) on contig 57 (453946 nt) Astart:134858 Aend:134879 Bstart:150484 Bend:150463 CALCULATED DISTANCE APART: 15626 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#52 -> -2262654 <- tig#r.5, A=490129 nt (start:51880, end:51901) B=3413765 nt (start:1569360, end:1569381) CALCULATED DISTANCE APART: -2262654 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTTTTCTTCTTGTTTCCATTT - ACCTGTACTTCAACGGCTCCT) on contig 16 (1744109 nt) Astart:1071151 Aend:1071172 Bstart:1075133 Bend:1075154 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#146 -> -90172 <- tig#278, B=173632 nt (start:67687, end:67708) A=17952 nt (start:4227, end:4206) CALCULATED DISTANCE APART: -90172 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#22 -> -808681 <- tig#20, B=1296783 nt (start:1220611, end:1220632) A=1524840 nt (start:752509, end:752488) CALCULATED DISTANCE APART: -808681 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.100 -> -1285831 <- tig#17, B=179680 nt (start:96947, end:96926) A=1742883 nt (start:1208884, end:1208863) CALCULATED DISTANCE APART: -1285831 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#26 -> -1482578 <- tig#40, B=1140087 nt (start:182102, end:182123) A=717909 nt (start:544593, end:544572) CALCULATED DISTANCE APART: -1482578 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -1079415 <- tig#15, B=2687965 nt (start:63625, end:63604) A=1925218 nt (start:1035790, end:1035769) CALCULATED DISTANCE APART: -1079415 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GAGTTATTATGGATAAAAGAA - GGAATGGTTTAAAGAAACTTG) on contig 57 (453946 nt) Astart:122183 Aend:122162 Bstart:123044 Bend:123023 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#4 -> -1036567 <- tig#34, B=3700243 nt (start:3107718, end:3107739) A=868147 nt (start:464042, end:464021) CALCULATED DISTANCE APART: -1036567 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGTAGAGAGCAACATCACATG - TCCTCCGGTGATGATTCCTAA) on contig 81 (280185 nt) Astart:192106 Aend:192127 Bstart:208876 Bend:208855 CALCULATED DISTANCE APART: 16770 Pairs unsatisfied in distance within a contig. Pair (ATGTAAATCCGATAAAATAGA - GTGATTCTAGATCAATTTAGA) on contig 33 (1401011 nt) Astart:911952 Aend:911973 Bstart:927674 Bend:927653 CALCULATED DISTANCE APART: 15722 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#30 -> -3059 <- tig#r.50, A=874307 nt (start:851520, end:851541) B=498313 nt (start:498041, end:498062) CALCULATED DISTANCE APART: -3059 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTTAGTTTATGAGTACATGGA - ACACACTCTCGGGCTTCTCAA) on contig 13 (2095837 nt) Astart:1420610 Aend:1420589 Bstart:1421578 Bend:1421557 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.550 -> -3119026 <- tig#5, B=1638 nt (start:299, end:278) A=3413765 nt (start:3138727, end:3138706) CALCULATED DISTANCE APART: -3119026 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#88 -> -148605 <- tig#61, B=242874 nt (start:142673, end:142694) A=407835 nt (start:68404, end:68383) CALCULATED DISTANCE APART: -148605 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GTAAAAAATTTGGAACATATA - TCTCCAACAATCTTCCAACCT) on contig 35 (828437 nt) Astart:191706 Aend:191685 Bstart:174473 Bend:174452 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#70 -> -240837 <- tig#102, A=350721 nt (start:111146, end:111167) B=163766 nt (start:21262, end:21241) CALCULATED DISTANCE APART: -240837 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#25 -> -1377325 <- tig#r.55, A=1894032 nt (start:625459, end:625480) B=473235 nt (start:344483, end:344504) CALCULATED DISTANCE APART: -1377325 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#92 -> -4063704 <- tig#1, A=204193 nt (start:171433, end:171454) B=4799971 nt (start:4050944, end:4050923) CALCULATED DISTANCE APART: -4063704 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TACAAAGCAACAAACAGGTTT - GTTAAGGAAAACGTTGGTCAT) on contig 3 (3848698 nt) Astart:2731348 Aend:2731327 Bstart:2719532 Bend:2719511 Pairs unsatisfied in distance within a contig. Pair (TTATACATTTCTCGATGACAG - CACGACGAGGAACGAAGTCAA) on contig 83 (262564 nt) Astart:151540 Aend:151519 Bstart:133749 Bend:133770 CALCULATED DISTANCE APART: 17791 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#47 -> -808155 <- tig#r.19, A=618158 nt (start:356506, end:356527) B=1545896 nt (start:979393, end:979414) CALCULATED DISTANCE APART: -808155 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#155 -> -813701 <- tig#33, A=83971 nt (start:53658, end:53679) B=1401011 nt (start:803388, end:803367) CALCULATED DISTANCE APART: -813701 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CCAGGTGATAGGTAACCCTTT - ATATTGCCAACGAAGTAGATA) on contig 21 (1453855 nt) Astart:160173 Aend:160194 Bstart:173239 Bend:173260 Pairs unsatisfied in distance within a contig. Pair (GGATCTTTGGCACACCAAGGC - ACTGCTCTTAGCCGCCATACT) on contig 13 (2095837 nt) Astart:1601432 Aend:1601411 Bstart:1587974 Bend:1587995 CALCULATED DISTANCE APART: 13458 Pairs unsatisfied in distance within a contig. Pair (TTTGGCACACCAAGGCGGTCA - ATTTCACTGCTCTTAGCCGCC) on contig 13 (2095837 nt) Astart:1601427 Aend:1601406 Bstart:1587969 Bend:1587990 CALCULATED DISTANCE APART: 13458 Pairs unsatisfied in pairing logic within a contig. Pair (TTTGAAAACTTTGACCGGAAT - TTTGAAGGACCTACCATAGTC) on contig 3 (3848698 nt) Astart:298179 Aend:298200 Bstart:311705 Bend:311726 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -3440786 <- tig#r.13, A=4252320 nt (start:1195264, end:1195285) B=2095837 nt (start:1692107, end:1692128) CALCULATED DISTANCE APART: -3440786 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#6 -> -5015419 <- tig#1, B=3988516 nt (start:3241366, end:3241387) A=4799971 nt (start:4288269, end:4288248) CALCULATED DISTANCE APART: -5015419 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.45 -> -519827 <- tig#29, B=672231 nt (start:337979, end:337958) A=906229 nt (start:201848, end:201827) CALCULATED DISTANCE APART: -519827 < -2000 Pairs unsatisfied in distance within a contig. Pair (GCATCGAAGAAAACATATCCA - CAACGGGAGGACTGCTTCGCC) on contig 83 (262564 nt) Astart:180879 Aend:180900 Bstart:198323 Bend:198302 CALCULATED DISTANCE APART: 17444 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#32 -> -3640385 <- tig#2, B=1165067 nt (start:818173, end:818194) A=3889777 nt (start:3313491, end:3313470) CALCULATED DISTANCE APART: -3640385 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#66 -> -688675 <- tig#11, A=365505 nt (start:53276, end:53297) B=2258275 nt (start:396446, end:396425) CALCULATED DISTANCE APART: -688675 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#5 -> -3167626 <- tig#114, B=3413765 nt (start:298259, end:298280) A=140364 nt (start:72120, end:72099) CALCULATED DISTANCE APART: -3167626 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -299416 <- tig#24, A=722869 nt (start:625651, end:625672) B=1160670 nt (start:222198, end:222177) CALCULATED DISTANCE APART: -299416 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.36 -> -700398 <- tig#138, B=792826 nt (start:686410, end:686389) A=108302 nt (start:33988, end:33967) CALCULATED DISTANCE APART: -700398 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#5 -> -2643802 <- tig#442, A=3413765 nt (start:751400, end:751421) B=2459 nt (start:1437, end:1416) CALCULATED DISTANCE APART: -2643802 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#60 -> -699675 <- tig#44, B=677274 nt (start:42196, end:42217) A=693657 nt (start:84597, end:84576) CALCULATED DISTANCE APART: -699675 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.10 -> -1730313 <- tig#24, B=2476307 nt (start:1137774, end:1137753) A=1160670 nt (start:612539, end:612518) CALCULATED DISTANCE APART: -1730313 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#231 -> -40264 <- tig#175, A=32185 nt (start:13375, end:13396) B=64049 nt (start:41454, end:41433) CALCULATED DISTANCE APART: -40264 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#76 -> -2111539 <- tig#r.5, A=309514 nt (start:76144, end:76165) B=3413765 nt (start:1515596, end:1515617) CALCULATED DISTANCE APART: -2111539 < -2000 Pairs unsatisfied in distance within a contig. Pair (CATTTGTATCTGTTTATCTGT - CGTGAGAAGTGGTGATGTTGA) on contig 11 (2258275 nt) Astart:163336 Aend:163315 Bstart:148582 Bend:148603 CALCULATED DISTANCE APART: 14754 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#22 -> -1845325 <- tig#4, A=1296783 nt (start:157125, end:157146) B=3700243 nt (start:725667, end:725646) CALCULATED DISTANCE APART: -1845325 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GTACGTTTTGCTTTCTTCTTA - AATTAGCTTTGTATGTCCATC) on contig 3 (3848698 nt) Astart:3768628 Aend:3768649 Bstart:3774236 Bend:3774257 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.40 -> -2320665 <- tig#1, B=717909 nt (start:415425, end:415404) A=4799971 nt (start:1925240, end:1925219) CALCULATED DISTANCE APART: -2320665 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.74 -> -324718 <- tig#9, B=317083 nt (start:107580, end:107559) A=2687965 nt (start:237138, end:237117) CALCULATED DISTANCE APART: -324718 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#12 -> -1138887 <- tig#246, B=4252320 nt (start:3097324, end:3097345) A=25770 nt (start:3891, end:3870) CALCULATED DISTANCE APART: -1138887 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTTTTTTTCTTGAAAATTAAT - GGAACAATTTGCGGTTGTGGT) on contig 1 (4799971 nt) Astart:819523 Aend:819544 Bstart:823365 Bend:823386 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.1 -> -1698602 <- tig#689, B=4799971 nt (start:1717775, end:1717754) A=1304 nt (start:827, end:806) CALCULATED DISTANCE APART: -1698602 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCAAATCTAAATCTTTAGAAT - CCCTGAAGATTTCCTCAACCA) on contig 18 (1637738 nt) Astart:1451967 Aend:1451988 Bstart:1463328 Bend:1463307 CALCULATED DISTANCE APART: 11361 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#1 -> -4484655 <- tig#r.16, A=4799971 nt (start:509760, end:509781) B=1744109 nt (start:1529665, end:1529686) CALCULATED DISTANCE APART: -4484655 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#44 -> -3366819 <- tig#r.2, A=693657 nt (start:23388, end:23409) B=3889777 nt (start:1173227, end:1173248) CALCULATED DISTANCE APART: -3366819 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#1 -> -4987631 <- tig#10, A=4799971 nt (start:1894539, end:1894560) B=2476307 nt (start:2102199, end:2102178) CALCULATED DISTANCE APART: -4987631 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTGGTGGCCACTACAAGTAAT - CAAGACATCAGGCTCACAATC) on contig 25 (1894032 nt) Astart:1736794 Aend:1736773 Bstart:1733239 Bend:1733218 Pairs unsatisfied in distance within a contig. Pair (GTGTTTTTAATCACAGCTTTG - CATCTATAGAGAGACTATACA) on contig 33 (1401011 nt) Astart:911643 Aend:911664 Bstart:927360 Bend:927339 CALCULATED DISTANCE APART: 15717 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#26 -> -235724 <- tig#45, A=1140087 nt (start:1074999, end:1075020) B=672231 nt (start:190636, end:190615) CALCULATED DISTANCE APART: -235724 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#70 -> -4230699 <- tig#12, A=350721 nt (start:169743, end:169764) B=4252320 nt (start:4069721, end:4069700) CALCULATED DISTANCE APART: -4230699 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#195 -> -76171 <- tig#61, A=47055 nt (start:8275, end:8296) B=407835 nt (start:57391, end:57370) CALCULATED DISTANCE APART: -76171 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#1 -> -2670820 <- tig#23, A=4799971 nt (start:2230845, end:2230866) B=1298420 nt (start:121694, end:121673) CALCULATED DISTANCE APART: -2670820 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGATAAACCACGAATCACAAC - TTTTTCTGTTAAAAACTCCAT) on contig 1 (4799971 nt) Astart:1791689 Aend:1791710 Bstart:1803688 Bend:1803667 CALCULATED DISTANCE APART: 11999 Pairs unsatisfied in distance within a contig. Pair (ACAAATTAAGAGCTTTGGAGA - CTCCTTCCCCTCTTCGTAAAT) on contig 33 (1401011 nt) Astart:911005 Aend:911026 Bstart:926716 Bend:926695 CALCULATED DISTANCE APART: 15711 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.16 -> -3289801 <- tig#4, B=1744109 nt (start:246497, end:246476) A=3700243 nt (start:3063304, end:3063283) CALCULATED DISTANCE APART: -3289801 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#1 -> -3420934 <- tig#r.3, A=4799971 nt (start:2171485, end:2171506) B=3848698 nt (start:3036250, end:3036271) CALCULATED DISTANCE APART: -3420934 < -2000 Pairs unsatisfied in distance within a contig. Pair (GTTTTGTTAACTGGATCATTT - AAGCAACAGGTATCATATATA) on contig 6 (3988516 nt) Astart:1140690 Aend:1140669 Bstart:1132663 Bend:1132684 CALCULATED DISTANCE APART: 8027 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#27 -> -912000 <- tig#r.271, A=1116231 nt (start:198074, end:198095) B=19540 nt (start:5697, end:5718) CALCULATED DISTANCE APART: -912000 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#18 -> -2580605 <- tig#r.22, A=1637738 nt (start:41386, end:41407) B=1296783 nt (start:292530, end:292551) CALCULATED DISTANCE APART: -2580605 < -2000 Pairs unsatisfied in distance within a contig. Pair (AATGCAAAGGCCATTGTTGTT - AGTTTTCGTGTTGTTTGAGAC) on contig 3 (3848698 nt) Astart:1309923 Aend:1309902 Bstart:1294124 Bend:1294145 CALCULATED DISTANCE APART: 15799 Pairs unsatisfied in pairing logic within a contig. Pair (TAGAGCATGCCTCACAAAGAT - CGAGTCTTCATCATCCTCAAA) on contig 25 (1894032 nt) Astart:1736504 Aend:1736483 Bstart:1733539 Bend:1733518 Pairs unsatisfied in distance within a contig. Pair (CTTTCAACCCTTTGACCTTCC - CCTACCTTCTCTTTTTATTGA) on contig 15 (1925218 nt) Astart:1350105 Aend:1350126 Bstart:1368100 Bend:1368079 CALCULATED DISTANCE APART: 17995 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.1 -> -2149498 <- tig#17, B=4799971 nt (start:2009621, end:2009600) A=1742883 nt (start:159877, end:159856) CALCULATED DISTANCE APART: -2149498 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TCAAGATCTTATCCATTGATG - TATGATGCTTACATTTCTGCA) on contig 20 (1524840 nt) Astart:703693 Aend:703714 Bstart:702358 Bend:702379 Pairs unsatisfied in distance within a contig. Pair (GCTGATGTGTCATTGGTTGGA - AATTATGTCATTTTTGTTAGG) on contig 1 (4799971 nt) Astart:1170167 Aend:1170188 Bstart:1185520 Bend:1185499 CALCULATED DISTANCE APART: 15353 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#8 -> -2559421 <- tig#r.93, A=2829393 nt (start:372034, end:372055) B=203845 nt (start:81783, end:81804) CALCULATED DISTANCE APART: -2559421 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#45 -> -2046381 <- tig#4, A=672231 nt (start:291802, end:291823) B=3700243 nt (start:1685952, end:1685931) CALCULATED DISTANCE APART: -2046381 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#33 -> -465657 <- tig#3, B=1401011 nt (start:1391406, end:1391427) A=3848698 nt (start:476052, end:476031) CALCULATED DISTANCE APART: -465657 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATCTCTTCATGATTCTGTTTC - TAATAGGAACAAAAAACTAGC) on contig 30 (874307 nt) Astart:277819 Aend:277798 Bstart:268842 Bend:268863 CALCULATED DISTANCE APART: 8977 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.7 -> -3803662 <- tig#15, B=3089900 nt (start:2130645, end:2130624) A=1925218 nt (start:1693017, end:1692996) CALCULATED DISTANCE APART: -3803662 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GATATATATGTTATTTTCTCT - GTAAAGAAGAGCATTTTAAAT) on contig 25 (1894032 nt) Astart:104672 Aend:104651 Bstart:101146 Bend:101125 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#9 -> -2480800 <- tig#14, A=2687965 nt (start:415441, end:415462) B=2017548 nt (start:228276, end:228255) CALCULATED DISTANCE APART: -2480800 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -2025810 <- tig#5, A=722869 nt (start:624840, end:624861) B=3413765 nt (start:1947781, end:1947760) CALCULATED DISTANCE APART: -2025810 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#4 -> -963562 <- tig#97, B=3700243 nt (start:2815763, end:2815784) A=186481 nt (start:99082, end:99061) CALCULATED DISTANCE APART: -963562 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#96 -> -978226 <- tig#4, B=190542 nt (start:12061, end:12082) A=3700243 nt (start:819745, end:819724) CALCULATED DISTANCE APART: -978226 < -2000 Pairs unsatisfied in distance within a contig. Pair (ACCACCTCTGACGAATTAGAG - CACTATGTGGCATAGTGTTTG) on contig 22 (1296783 nt) Astart:476713 Aend:476734 Bstart:491632 Bend:491611 CALCULATED DISTANCE APART: 14919 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#62 -> -1731280 <- tig#9, B=401410 nt (start:292158, end:292179) A=2687965 nt (start:1642028, end:1642007) CALCULATED DISTANCE APART: -1731280 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.15 -> -505426 <- tig#12, B=1925218 nt (start:269547, end:269526) A=4252320 nt (start:255879, end:255858) CALCULATED DISTANCE APART: -505426 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.235 -> -1232142 <- tig#9, B=31151 nt (start:7253, end:7232) A=2687965 nt (start:1244889, end:1244868) CALCULATED DISTANCE APART: -1232142 < -2000 Pairs unsatisfied in distance within a contig. Pair (GAATGCATGACGATGCATAGT - AAGGAATTTGACTCTAAAATT) on contig 116 (139567 nt) Astart:106326 Aend:106347 Bstart:124265 Bend:124244 CALCULATED DISTANCE APART: 17939 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#36 -> -336938 <- tig#66, B=792826 nt (start:760783, end:760804) A=365505 nt (start:324895, end:324874) CALCULATED DISTANCE APART: -336938 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TGGGAAGAAATTATGGCTGTC - AGCAGAATTTTGAGAAGGCAA) on contig 13 (2095837 nt) Astart:1420984 Aend:1420963 Bstart:1421154 Bend:1421133 Pairs unsatisfied in distance within a contig. Pair (ATTGCTTCTTTCTCGTTGAGG - TTGGGACATTTCTAAGCAGAC) on contig 18 (1637738 nt) Astart:1257268 Aend:1257289 Bstart:1274397 Bend:1274376 CALCULATED DISTANCE APART: 17129 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#59 -> -24436 <- tig#23, B=435783 nt (start:416502, end:416523) A=1298420 nt (start:25155, end:25134) CALCULATED DISTANCE APART: -24436 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#299 -> -3801 <- tig#205, B=13108 nt (start:12370, end:12391) A=41546 nt (start:23063, end:23042) CALCULATED DISTANCE APART: -3801 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#15 -> -1928257 <- tig#83, A=1925218 nt (start:37546, end:37567) B=262564 nt (start:60585, end:60564) CALCULATED DISTANCE APART: -1928257 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAGAAAGAAAGAAAGAAGATC - CCAAGTTATGAACTTATGTGC) on contig 7 (3089900 nt) Astart:2332960 Aend:2332981 Bstart:2347240 Bend:2347219 CALCULATED DISTANCE APART: 14280 Pairs unsatisfied in distance within a contig. Pair (ATGCAAGAAGACAAAAATTTA - AGGTTGTAAACCTAATTTCGT) on contig 6 (3988516 nt) Astart:863190 Aend:863169 Bstart:847750 Bend:847771 CALCULATED DISTANCE APART: 15440 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#2 -> -6203028 <- tig#5, B=3889777 nt (start:44835, end:44856) A=3413765 nt (start:2378086, end:2378065) CALCULATED DISTANCE APART: -6203028 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTAGCTTTCCGGCAACCACCT - TATATGATACCAGGGTTGCTG) on contig 3 (3848698 nt) Astart:2520444 Aend:2520465 Bstart:2537099 Bend:2537078 CALCULATED DISTANCE APART: 16655 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.66 -> -212052 <- tig#60, B=365505 nt (start:177414, end:177393) A=677274 nt (start:54638, end:54617) CALCULATED DISTANCE APART: -212052 < -2000 Pairs unsatisfied in distance within a contig. Pair (CAACAACCATCAGCTTCACAC - GAAATTTCCTTATTAGATAGA) on contig 26 (1140087 nt) Astart:485981 Aend:485960 Bstart:468783 Bend:468804 CALCULATED DISTANCE APART: 17198 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#23 -> -666604 <- tig#19, B=1298420 nt (start:825548, end:825569) A=1545896 nt (start:213732, end:213711) CALCULATED DISTANCE APART: -666604 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.5 -> -3081002 <- tig#56, B=3413765 nt (start:2864949, end:2864928) A=468413 nt (start:236053, end:236032) CALCULATED DISTANCE APART: -3081002 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TCAATCATAGATGGATAAAGG - ATTATATATTACACAATGCCA) on contig 25 (1894032 nt) Astart:1735143 Aend:1735122 Bstart:1734916 Bend:1734895 Pairs unsatisfied in pairing logic within a contig. Pair (ATTCAAAAACCGGAAGCACCA - GAAAAAAAAAAAAAAAATGCC) on contig 25 (1894032 nt) Astart:1073428 Aend:1073449 Bstart:1602077 Bend:1602098 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#25 -> -2475042 <- tig#33, B=1894032 nt (start:128343, end:128364) A=1401011 nt (start:729353, end:729332) CALCULATED DISTANCE APART: -2475042 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.136 -> -507036 <- tig#51, B=206084 nt (start:167404, end:167383) A=497268 nt (start:359632, end:359611) CALCULATED DISTANCE APART: -507036 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#12 -> -1955113 <- tig#82, A=4252320 nt (start:2379057, end:2379078) B=359103 nt (start:101850, end:101829) CALCULATED DISTANCE APART: -1955113 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#99 -> -133617 <- tig#r.36, A=184228 nt (start:162920, end:162941) B=792826 nt (start:660517, end:660538) CALCULATED DISTANCE APART: -133617 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.172 -> -88612 <- tig#73, B=69312 nt (start:50388, end:50367) A=318307 nt (start:58224, end:58203) CALCULATED DISTANCE APART: -88612 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTTCACAGCCCTGGACTATGA - CGAGGAGTTACGCTGGATGGA) on contig 19 (1545896 nt) Astart:391085 Aend:391106 Bstart:400446 Bend:400467 Pairs unsatisfied in distance within a contig. Pair (GAATGTATTGGAGCGTTTTTG - ATCATTAAATGTAAATAGATA) on contig 172 (69312 nt) Astart:36405 Aend:36426 Bstart:52336 Bend:52315 CALCULATED DISTANCE APART: 15931 Pairs unsatisfied in distance within a contig. Pair (AGCTAGTTGAATTAGTTTTAT - CACTGGTCCACAAGTAACTCT) on contig 9 (2687965 nt) Astart:1486490 Aend:1486469 Bstart:1469408 Bend:1469429 CALCULATED DISTANCE APART: 17082 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#6 -> -1885559 <- tig#r.76, A=3988516 nt (start:2310425, end:2310446) B=309514 nt (start:82046, end:82067) CALCULATED DISTANCE APART: -1885559 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#60 -> -643930 <- tig#18, A=677274 nt (start:297820, end:297841) B=1637738 nt (start:284476, end:284455) CALCULATED DISTANCE APART: -643930 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTTATGAGTACATGGAAAACG - ATACTACACACTCTCGGGCTT) on contig 13 (2095837 nt) Astart:1420605 Aend:1420584 Bstart:1421583 Bend:1421562 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#83 -> -118396 <- tig#r.218, A=262564 nt (start:159074, end:159095) B=35338 nt (start:432, end:453) CALCULATED DISTANCE APART: -118396 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#15 -> -4393940 <- tig#12, A=1925218 nt (start:796516, end:796537) B=4252320 nt (start:3285238, end:3285217) CALCULATED DISTANCE APART: -4393940 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#8 -> -3494693 <- tig#15, B=2829393 nt (start:224977, end:224998) A=1925218 nt (start:910277, end:910256) CALCULATED DISTANCE APART: -3494693 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -4641857 <- tig#r.13, A=4252320 nt (start:24782, end:24803) B=2095837 nt (start:1661518, end:1661539) CALCULATED DISTANCE APART: -4641857 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAACCCATAAAACGAAAGAGA - TATGATTCAACTTTAATTCTC) on contig 13 (2095837 nt) Astart:871922 Aend:871943 Bstart:886956 Bend:886935 CALCULATED DISTANCE APART: 15034 Pairs unsatisfied in pairing logic within a contig. Pair (TTCCAGAATTCTTCGCCATGG - TTGCGAGGATAACTCCTGCTG) on contig 23 (1298420 nt) Astart:491922 Aend:491901 Bstart:492006 Bend:492027 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.68 -> -2620001 <- tig#7, B=360191 nt (start:47572, end:47551) A=3089900 nt (start:2592429, end:2592408) CALCULATED DISTANCE APART: -2620001 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.3 -> -2781042 <- tig#150, B=3848698 nt (start:2791042, end:2791021) A=91302 nt (start:10000, end:9979) CALCULATED DISTANCE APART: -2781042 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -2687834 <- tig#7, A=722869 nt (start:627403, end:627424) B=3089900 nt (start:2612368, end:2612347) CALCULATED DISTANCE APART: -2687834 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#54 -> -524342 <- tig#30, A=495878 nt (start:177034, end:177055) B=874307 nt (start:225498, end:225477) CALCULATED DISTANCE APART: -524342 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGCCACTCTAGCTCAAGTCCT - CCTTCGCCGCAGAATATCAAA) on contig 7 (3089900 nt) Astart:1297466 Aend:1297445 Bstart:1296725 Bend:1296704 Pairs unsatisfied in pairing logic within a contig. Pair (GTAGCAATGGTGGTAAGACTT - CACCAACAATCTCCGCCGTAA) on contig 7 (3089900 nt) Astart:327817 Aend:327796 Bstart:332014 Bend:331993 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#154 -> -4123833 <- tig#r.1, A=84292 nt (start:9687, end:9708) B=4799971 nt (start:730743, end:730764) CALCULATED DISTANCE APART: -4123833 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#34 -> -813253 <- tig#31, B=868147 nt (start:335211, end:335232) A=872282 nt (start:300317, end:300296) CALCULATED DISTANCE APART: -813253 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.174 -> -593970 <- tig#3, B=64387 nt (start:52782, end:52761) A=3848698 nt (start:561188, end:561167) CALCULATED DISTANCE APART: -593970 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.24 -> -787853 <- tig#66, B=1160670 nt (start:482953, end:482932) A=365505 nt (start:324900, end:324879) CALCULATED DISTANCE APART: -787853 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.103 -> -90614 <- tig#83, B=163531 nt (start:80450, end:80429) A=262564 nt (start:30164, end:30143) CALCULATED DISTANCE APART: -90614 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#5 -> -3200115 <- tig#100, A=3413765 nt (start:290598, end:290619) B=179680 nt (start:96948, end:96927) CALCULATED DISTANCE APART: -3200115 < -2000 Pairs unsatisfied in distance within a contig. Pair (AACGAACCAAATTGGGCCTGA - AAACTATTTCTTTGTAATCGC) on contig 17 (1742883 nt) Astart:1701768 Aend:1701747 Bstart:1687210 Bend:1687231 CALCULATED DISTANCE APART: 14558 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.4 -> -1749243 <- tig#8, B=3700243 nt (start:1516721, end:1516700) A=2829393 nt (start:252522, end:252501) CALCULATED DISTANCE APART: -1749243 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#9 -> -3635204 <- tig#5, A=2687965 nt (start:1297858, end:1297879) B=3413765 nt (start:2265097, end:2265076) CALCULATED DISTANCE APART: -3635204 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#8 -> -2559405 <- tig#r.93, A=2829393 nt (start:371803, end:371824) B=203845 nt (start:82030, end:82051) CALCULATED DISTANCE APART: -2559405 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#14 -> -1779518 <- tig#114, A=2017548 nt (start:224215, end:224236) B=140364 nt (start:6185, end:6164) CALCULATED DISTANCE APART: -1779518 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#1 -> -3021609 <- tig#33, B=4799971 nt (start:2487481, end:2487502) A=1401011 nt (start:729119, end:729098) CALCULATED DISTANCE APART: -3021609 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGTTAGCTGACTTGGAGTGGT - TTAAATAACAATTCTTCCAAG) on contig 63 (393958 nt) Astart:290495 Aend:290474 Bstart:273764 Bend:273785 CALCULATED DISTANCE APART: 16731 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#8 -> -1280804 <- tig#r.43, A=2829393 nt (start:1716401, end:1716422) B=702740 nt (start:514928, end:514949) CALCULATED DISTANCE APART: -1280804 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#10 -> -1370812 <- tig#r.11, A=2476307 nt (start:1316545, end:1316566) B=2258275 nt (start:2027225, end:2027246) CALCULATED DISTANCE APART: -1370812 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.22 -> -1835917 <- tig#13, B=1296783 nt (start:108742, end:108721) A=2095837 nt (start:1747175, end:1747154) CALCULATED DISTANCE APART: -1835917 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCTGTTAAATCAAACGATGTC - TTTCACAGGACATGACTCTTG) on contig 6 (3988516 nt) Astart:1140618 Aend:1140597 Bstart:1132592 Bend:1132613 CALCULATED DISTANCE APART: 8026 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -4582286 <- tig#r.1, A=2095837 nt (start:1266661, end:1266682) B=4799971 nt (start:1026861, end:1026882) CALCULATED DISTANCE APART: -4582286 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TAACTTTCCAGTTATTCATAG - CATGTTTCTGAGCCCTATGGA) on contig 11 (2258275 nt) Astart:2064921 Aend:2064942 Bstart:2073304 Bend:2073325 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -1890912 <- tig#14, B=2829393 nt (start:978586, end:978565) A=2017548 nt (start:932326, end:932305) CALCULATED DISTANCE APART: -1890912 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATTTCTTCGTAATCGAATTAC - TTTTAGGAGGGGACAAGGAAT) on contig 12 (4252320 nt) Astart:1079824 Aend:1079803 Bstart:1072704 Bend:1072683 Pairs unsatisfied in distance within a contig. Pair (AATCCGATAAAATAGATGTTT - CTTCCGTGATTCTAGATCAAT) on contig 33 (1401011 nt) Astart:911957 Aend:911978 Bstart:927679 Bend:927658 CALCULATED DISTANCE APART: 15722 Pairs unsatisfied in pairing logic within a contig. Pair (AGAATCTGAAATGATTCAACC - TATATTTCTATGATCATTCAT) on contig 57 (453946 nt) Astart:123923 Aend:123902 Bstart:121381 Bend:121360 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -3706123 <- tig#r.4, A=4252320 nt (start:936223, end:936244) B=3700243 nt (start:3290217, end:3290238) CALCULATED DISTANCE APART: -3706123 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.12 -> -3928521 <- tig#30, B=4252320 nt (start:3286555, end:3286534) A=874307 nt (start:661966, end:661945) CALCULATED DISTANCE APART: -3928521 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#5 -> -2643834 <- tig#442, A=3413765 nt (start:751187, end:751208) B=2459 nt (start:1256, end:1235) CALCULATED DISTANCE APART: -2643834 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#7 -> -1874894 <- tig#35, A=3089900 nt (start:1839531, end:1839552) B=828437 nt (start:644525, end:644504) CALCULATED DISTANCE APART: -1874894 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#1 -> -1936200 <- tig#r.20, A=4799971 nt (start:2848180, end:2848201) B=1524840 nt (start:1520431, end:1520452) CALCULATED DISTANCE APART: -1936200 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.7 -> -1650243 <- tig#98, B=3089900 nt (start:1560706, end:1560685) A=186419 nt (start:109537, end:109516) CALCULATED DISTANCE APART: -1650243 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATTCGGATCGCCTTAGTGGCT - GCACTTCCTTCTACCGGCCCT) on contig 83 (262564 nt) Astart:172672 Aend:172693 Bstart:184248 Bend:184269 Pairs unsatisfied in pairing logic within a contig. Pair (AGTTTAGGTTCAACTTTACCA - AAAAATGAAACCTTGAGATCT) on contig 14 (2017548 nt) Astart:174704 Aend:174683 Bstart:175333 Bend:175312 Pairs unsatisfied in distance within a contig. Pair (AACATCACATGACAACAACAA - GTGGAAAACTTCCTCCGGTGA) on contig 81 (280185 nt) Astart:192116 Aend:192137 Bstart:208886 Bend:208865 CALCULATED DISTANCE APART: 16770 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#36 -> -605745 <- tig#353, A=792826 nt (start:170309, end:170330) B=6821 nt (start:3228, end:3207) CALCULATED DISTANCE APART: -605745 < -2000 Pairs unsatisfied in distance within a contig. Pair (GTTAGGAATTCAGATAAGCTT - TTTTGTATCTATGGGATAGTG) on contig 1 (4799971 nt) Astart:2239187 Aend:2239166 Bstart:2225495 Bend:2225516 CALCULATED DISTANCE APART: 13692 Pairs unsatisfied in pairing logic within a contig. Pair (TTAATTGGGGAATTTGGGACC - CAATGGCTTCAGCAGATTTCA) on contig 3 (3848698 nt) Astart:2299857 Aend:2299836 Bstart:2285692 Bend:2285671 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#10 -> -3241673 <- tig#14, A=2476307 nt (start:756645, end:756666) B=2017548 nt (start:1542011, end:1541990) CALCULATED DISTANCE APART: -3241673 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#8 -> -2947491 <- tig#r.17, A=2829393 nt (start:375667, end:375688) B=1742883 nt (start:1229118, end:1229139) CALCULATED DISTANCE APART: -2947491 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.26 -> -3638789 <- tig#1, B=1140087 nt (start:1023594, end:1023573) A=4799971 nt (start:2635195, end:2635174) CALCULATED DISTANCE APART: -3638789 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CTGATTTCTGGTTCTTCTTTC - GCTTGTACCTTTGGTGGAATT) on contig 6 (3988516 nt) Astart:3476658 Aend:3476679 Bstart:3476309 Bend:3476330 Pairs unsatisfied in distance within a contig. Pair (AATAATAGTTGACAAAGTTAT - CTATATAGACACGAAGAATAT) on contig 72 (488863 nt) Astart:127878 Aend:127857 Bstart:110573 Bend:110594 CALCULATED DISTANCE APART: 17305 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#551 -> -542842 <- tig#r.48, A=1638 nt (start:362, end:383) B=1252891 nt (start:691325, end:691346) CALCULATED DISTANCE APART: -542842 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGCCCTTTCTCTTCAACCTCT - AAGATGATTTTTCAACTGTTG) on contig 16 (1744109 nt) Astart:1439824 Aend:1439845 Bstart:1447343 Bend:1447364 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#12 -> -2656123 <- tig#107, B=4252320 nt (start:1721296, end:1721317) A=151872 nt (start:145099, end:145078) CALCULATED DISTANCE APART: -2656123 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTATTGTCGATGTAAGTATTT - GTGACGGGACACAAAGGGTTG) on contig 6 (3988516 nt) Astart:3854084 Aend:3854063 Bstart:3842231 Bend:3842252 CALCULATED DISTANCE APART: 11853 Pairs unsatisfied in distance within a contig. Pair (TTTTGTTGGTTGTATTTGGTG - GTTCAGTCCTCAGCGAACTAC) on contig 26 (1140087 nt) Astart:336986 Aend:337007 Bstart:353326 Bend:353305 CALCULATED DISTANCE APART: 16340 Pairs unsatisfied in distance within a contig. Pair (AGGATATCTCCGAGACCCTTT - TCTCCACAGGTTGGTTTCTTG) on contig 13 (2095837 nt) Astart:1049783 Aend:1049762 Bstart:1035087 Bend:1035108 CALCULATED DISTANCE APART: 14696 Pairs unsatisfied in distance within a contig. Pair (TATCTTGTTTTTAGTGTGAAA - TTTCAAGGAACCCATACTAAA) on contig 80 (282893 nt) Astart:268201 Aend:268222 Bstart:282856 Bend:282835 CALCULATED DISTANCE APART: 14655 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#12 -> -1620908 <- tig#2, B=4252320 nt (start:2802243, end:2802264) A=3889777 nt (start:190831, end:190810) CALCULATED DISTANCE APART: -1620908 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#193 -> -16231 <- tig#84, B=48386 nt (start:13331, end:13352) A=349037 nt (start:1176, end:1155) CALCULATED DISTANCE APART: -16231 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CTTCTGACATTATATTATGAT - GAATTAGGCAAACCGAGCCAA) on contig 25 (1894032 nt) Astart:1735345 Aend:1735324 Bstart:1734717 Bend:1734696 Pairs unsatisfied in distance within a contig. Pair (AAGTAGTCTAAGCTAACTTAT - TTACTTTCTCGATTAATTGAG) on contig 75 (315030 nt) Astart:239976 Aend:239955 Bstart:228273 Bend:228294 CALCULATED DISTANCE APART: 11703 Pairs unsatisfied in pairing logic within a contig. Pair (AGTCCTGTAACTTGAAAACAT - GTTCAGTAAGGTTATTGGCAA) on contig 49 (529875 nt) Astart:384229 Aend:384250 Bstart:396518 Bend:396539 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#36 -> -605745 <- tig#353, A=792826 nt (start:170399, end:170420) B=6821 nt (start:3318, end:3297) CALCULATED DISTANCE APART: -605745 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TCATTGTTAATTTGTTTAGAA - AATAAAATCTATGTCAATACC) on contig 7 (3089900 nt) Astart:1986764 Aend:1986743 Bstart:1969216 Bend:1969195 Pairs unsatisfied in pairing logic within a contig. Pair (AAATAGAGAGTGTATTCATGT - ACCACAAAACATTGCTAGTTT) on contig 57 (453946 nt) Astart:125028 Aend:125007 Bstart:120314 Bend:120293 Pairs unsatisfied in distance within a contig. Pair (ACTTCTGAGTTCTGACCACAT - CCCGCCATATCAAACGCACCA) on contig 4 (3700243 nt) Astart:2894210 Aend:2894231 Bstart:2909021 Bend:2909000 CALCULATED DISTANCE APART: 14811 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.68 -> -571637 <- tig#65, B=360191 nt (start:251553, end:251532) A=411873 nt (start:340084, end:340063) CALCULATED DISTANCE APART: -571637 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TAGTTGATTTAACTTTTCAAA - TATTTTATGATTCTATTGTCC) on contig 58 (439424 nt) Astart:152850 Aend:152871 Bstart:154670 Bend:154691 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#60 -> -2020352 <- tig#4, A=677274 nt (start:225611, end:225632) B=3700243 nt (start:1588689, end:1588668) CALCULATED DISTANCE APART: -2020352 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -2466414 <- tig#100, B=2829393 nt (start:2438980, end:2438959) A=179680 nt (start:47434, end:47413) CALCULATED DISTANCE APART: -2466414 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#1 -> -3892186 <- tig#r.738, A=4799971 nt (start:888326, end:888347) B=1229 nt (start:688, end:709) CALCULATED DISTANCE APART: -3892186 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#40 -> -1760779 <- tig#13, B=717909 nt (start:537018, end:537039) A=2095837 nt (start:1599888, end:1599867) CALCULATED DISTANCE APART: -1760779 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#9 -> -1960874 <- tig#r.7, A=2687965 nt (start:888040, end:888061) B=3089900 nt (start:2908951, end:2908972) CALCULATED DISTANCE APART: -1960874 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#13 -> -1785107 <- tig#48, B=2095837 nt (start:576129, end:576150) A=1252891 nt (start:285399, end:285378) CALCULATED DISTANCE APART: -1785107 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#96 -> -744104 <- tig#r.29, A=190542 nt (start:188889, end:188910) B=906229 nt (start:143778, end:143799) CALCULATED DISTANCE APART: -744104 < -2000 Pairs unsatisfied in distance within a contig. Pair (TAAATCAAACGATGTCGTTTA - AAAAATTTCACAGGACATGAC) on contig 6 (3988516 nt) Astart:1140613 Aend:1140592 Bstart:1132587 Bend:1132608 CALCULATED DISTANCE APART: 8026 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#33 -> -1247196 <- tig#35, B=1401011 nt (start:580285, end:580306) A=828437 nt (start:446470, end:446449) CALCULATED DISTANCE APART: -1247196 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AATATGCAATAGCCAATGGTG - AACTCCTCGTCGGCGTCATTT) on contig 57 (453946 nt) Astart:126794 Aend:126773 Bstart:118626 Bend:118605 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#3 -> -3838681 <- tig#r.24, A=3848698 nt (start:5386, end:5407) B=1160670 nt (start:1145301, end:1145322) CALCULATED DISTANCE APART: -3838681 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGCAAGTCATGAAAGGAGTCA - AACCAACCACAAGGGGAATAG) on contig 20 (1524840 nt) Astart:703531 Aend:703552 Bstart:702531 Bend:702552 Pairs unsatisfied in pairing logic within a contig. Pair (TCAATTCATGTCGATTATTAC - TTCTGAAGATTTCCAAATATT) on contig 5 (3413765 nt) Astart:915360 Aend:915381 Bstart:916686 Bend:916707 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#24 -> -2359422 <- tig#r.4, A=1160670 nt (start:600054, end:600075) B=3700243 nt (start:1881437, end:1881458) CALCULATED DISTANCE APART: -2359422 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#20 -> -3671 <- tig#r.69, A=1524840 nt (start:1515337, end:1515358) B=356702 nt (start:342534, end:342555) CALCULATED DISTANCE APART: -3671 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.13 -> -2981360 <- tig#9, B=2095837 nt (start:1358525, end:1358504) A=2687965 nt (start:1642835, end:1642814) CALCULATED DISTANCE APART: -2981360 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.3 -> -2274977 <- tig#12, B=3848698 nt (start:1817945, end:1817924) A=4252320 nt (start:477032, end:477011) CALCULATED DISTANCE APART: -2274977 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.166 -> -120144 <- tig#117, B=75506 nt (start:34188, end:34167) A=138887 nt (start:105956, end:105935) CALCULATED DISTANCE APART: -120144 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#46 -> -642021 <- tig#r.254, A=658085 nt (start:17895, end:17916) B=23213 nt (start:1382, end:1403) CALCULATED DISTANCE APART: -642021 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TACTCCAATCCGGTCCTCTGC - AAAAGCACATAGGTCTTTGTT) on contig 25 (1894032 nt) Astart:1738826 Aend:1738805 Bstart:1731238 Bend:1731217 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#96 -> -134533 <- tig#550, A=190542 nt (start:36304, end:36325) B=1638 nt (start:295, end:274) CALCULATED DISTANCE APART: -134533 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -990295 <- tig#18, A=2829393 nt (start:1927379, end:1927400) B=1637738 nt (start:108281, end:108260) CALCULATED DISTANCE APART: -990295 < -2000 Pairs unsatisfied in distance within a contig. Pair (CCGAACAGGGCCTAAGCCGTT - TGTACTAGTTAGCTTCATGGC) on contig 7 (3089900 nt) Astart:693174 Aend:693195 Bstart:693363 Bend:693342 CALCULATED DISTANCE APART: 189 Pairs unsatisfied in distance within a contig. Pair (GAAGATTAAAAGAGGAGATAA - TGAGAGTCAATCAAATGAAAT) on contig 24 (1160670 nt) Astart:317057 Aend:317036 Bstart:299981 Bend:300002 CALCULATED DISTANCE APART: 17076 Pairs unsatisfied in distance within a contig. Pair (TTTTGTTTACACAGAGAATTG - AATGTGTTTGAAAATGATAAA) on contig 9 (2687965 nt) Astart:1057063 Aend:1057042 Bstart:1040405 Bend:1040426 CALCULATED DISTANCE APART: 16658 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#19 -> -1637050 <- tig#3, B=1545896 nt (start:980197, end:980218) A=3848698 nt (start:1091351, end:1091330) CALCULATED DISTANCE APART: -1637050 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.52 -> -3240455 <- tig#5, B=490129 nt (start:165455, end:165434) A=3413765 nt (start:3095000, end:3094979) CALCULATED DISTANCE APART: -3240455 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AATGTTTTATAAGATCATGGT - ATGAAAAGAAAACACTCTGCG) on contig 19 (1545896 nt) Astart:389385 Aend:389406 Bstart:402113 Bend:402134 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.232 -> -99679 <- tig#72, B=32075 nt (start:19774, end:19753) A=488863 nt (start:99905, end:99884) CALCULATED DISTANCE APART: -99679 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTCATATCAATAACCACAAGA - GTAGTCTTCTCTCCGGTTTTT) on contig 7 (3089900 nt) Astart:1297593 Aend:1297572 Bstart:1296594 Bend:1296573 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#38 -> -640979 <- tig#51, B=738226 nt (start:478267, end:478288) A=497268 nt (start:401020, end:400999) CALCULATED DISTANCE APART: -640979 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -2270894 <- tig#r.11, A=2017548 nt (start:1492093, end:1492114) B=2258275 nt (start:492836, end:492857) CALCULATED DISTANCE APART: -2270894 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TCCTGTCAATTTTTTAAATTT - TTCGATCGCCGCTCTCGCCGT) on contig 16 (1744109 nt) Astart:1071220 Aend:1071241 Bstart:1075068 Bend:1075089 Pairs unsatisfied in distance within a contig. Pair (TCAAAACCAATAAGAAACAGT - ATGTGTTTATATTTGAAACAG) on contig 14 (2017548 nt) Astart:844110 Aend:844089 Bstart:826167 Bend:826188 CALCULATED DISTANCE APART: 17943 Pairs unsatisfied in pairing logic within a contig. Pair (TTTCTCTTCAACCTCTCTCTT - CAAGTAAGATGATTTTTCAAC) on contig 16 (1744109 nt) Astart:1439829 Aend:1439850 Bstart:1447338 Bend:1447359 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.101 -> -728565 <- tig#16, B=173584 nt (start:26766, end:26745) A=1744109 nt (start:721799, end:721778) CALCULATED DISTANCE APART: -728565 < -2000 Pairs unsatisfied in distance within a contig. Pair (AACAATCTGATGATGGAAGCA - GATGACTCTTCACATGGTGAA) on contig 61 (407835 nt) Astart:168762 Aend:168741 Bstart:155254 Bend:155275 CALCULATED DISTANCE APART: 13508 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.30 -> -156302 <- tig#146, B=874307 nt (start:154033, end:154012) A=173632 nt (start:22269, end:22248) CALCULATED DISTANCE APART: -156302 < -2000 Pairs unsatisfied in distance within a contig. Pair (CATAACAATTAGATGGAGGAT - AAAAATGAGGGTTCTTCATCC) on contig 12 (4252320 nt) Astart:1312447 Aend:1312468 Bstart:1329274 Bend:1329253 CALCULATED DISTANCE APART: 16827 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#4 -> -3833941 <- tig#r.12, A=3700243 nt (start:2515496, end:2515517) B=4252320 nt (start:1583126, end:1583147) CALCULATED DISTANCE APART: -3833941 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#21 -> -3883493 <- tig#2, A=1453855 nt (start:1304499, end:1304520) B=3889777 nt (start:3754137, end:3754116) CALCULATED DISTANCE APART: -3883493 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#11 -> -940560 <- tig#15, A=2258275 nt (start:2213346, end:2213367) B=1925218 nt (start:915631, end:915610) CALCULATED DISTANCE APART: -940560 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAAGCACAAATTAAGAGCTTT - TCCCCTCTTCGTAAATCGAGA) on contig 33 (1401011 nt) Astart:911000 Aend:911021 Bstart:926711 Bend:926690 CALCULATED DISTANCE APART: 15711 Pairs unsatisfied in pairing logic within a contig. Pair (CAACGTATTTTACAATGTTGC - CGGCAAAATCCGCCGGAGTTA) on contig 7 (3089900 nt) Astart:2725465 Aend:2725444 Bstart:2727216 Bend:2727195 Pairs unsatisfied in distance within a contig. Pair (GTTCTGGATATGTTGTGATGT - AAAAGAAACATATGAAAAAAA) on contig 10 (2476307 nt) Astart:799743 Aend:799764 Bstart:817441 Bend:817420 CALCULATED DISTANCE APART: 17698 Pairs unsatisfied in distance within a contig. Pair (ACCGAACTTAGGCATTAAGAA - ATTGGGAAGACATAAAATTTG) on contig 29 (906229 nt) Astart:157015 Aend:157036 Bstart:169679 Bend:169658 CALCULATED DISTANCE APART: 12664 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#17 -> -826424 <- tig#138, B=1742883 nt (start:939019, end:939040) A=108302 nt (start:42560, end:42539) CALCULATED DISTANCE APART: -826424 < -2000 Pairs unsatisfied in distance within a contig. Pair (CGAGGTTTGTAGAAGAGGACT - AACACAAATTTTATTTTCAAT) on contig 31 (872282 nt) Astart:621501 Aend:621522 Bstart:635917 Bend:635896 CALCULATED DISTANCE APART: 14416 Pairs unsatisfied in pairing logic within a contig. Pair (TTAACTACTATTTCTGCATGG - TCCAACTTGAGGATTTATTTA) on contig 139 (107517 nt) Astart:35164 Aend:35143 Bstart:32878 Bend:32857 Pairs unsatisfied in distance within a contig. Pair (GAGAGAACCACAGAATTATAA - TTCTGAATATTTAAATTTTAA) on contig 17 (1742883 nt) Astart:1148267 Aend:1148288 Bstart:1162235 Bend:1162214 CALCULATED DISTANCE APART: 13968 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#21 -> -1608757 <- tig#20, A=1453855 nt (start:40249, end:40270) B=1524840 nt (start:215151, end:215130) CALCULATED DISTANCE APART: -1608757 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.137 -> -181569 <- tig#62, B=108483 nt (start:103996, end:103975) A=401410 nt (start:97573, end:97552) CALCULATED DISTANCE APART: -181569 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#116 -> -112665 <- tig#95, A=139567 nt (start:15456, end:15477) B=191240 nt (start:8554, end:8533) CALCULATED DISTANCE APART: -112665 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#38 -> -844522 <- tig#23, B=738226 nt (start:645887, end:645908) A=1298420 nt (start:772183, end:772162) CALCULATED DISTANCE APART: -844522 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTAGTTTGATCATTTATGTGT - GTGAAGAGGAACTTTAAACAA) on contig 90 (305471 nt) Astart:264009 Aend:264030 Bstart:280938 Bend:280917 CALCULATED DISTANCE APART: 16929 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -2821090 <- tig#r.8, A=2095837 nt (start:1360615, end:1360636) B=2829393 nt (start:723525, end:723546) CALCULATED DISTANCE APART: -2821090 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#35 -> -1940407 <- tig#8, A=828437 nt (start:582177, end:582198) B=2829393 nt (start:1714147, end:1714126) CALCULATED DISTANCE APART: -1940407 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTTTTCCATGGAAAAGTTCGC - AAAGATATATTAAACGAATTT) on contig 30 (874307 nt) Astart:278574 Aend:278553 Bstart:269546 Bend:269567 CALCULATED DISTANCE APART: 9028 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#32 -> -1988404 <- tig#10, B=1165067 nt (start:360270, end:360291) A=2476307 nt (start:1203607, end:1203586) CALCULATED DISTANCE APART: -1988404 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#8 -> -3350993 <- tig#r.20, A=2829393 nt (start:579832, end:579853) B=1524840 nt (start:403408, end:403429) CALCULATED DISTANCE APART: -3350993 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.5 -> -1559946 <- tig#48, B=3413765 nt (start:354309, end:354288) A=1252891 nt (start:1225637, end:1225616) CALCULATED DISTANCE APART: -1559946 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TATTTTACAATGTTGCAAAAC - ATAAACGGCAAAATCCGCCGG) on contig 7 (3089900 nt) Astart:2725460 Aend:2725439 Bstart:2727221 Bend:2727200 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#9 -> -5861743 <- tig#r.6, A=2687965 nt (start:270153, end:270174) B=3988516 nt (start:524585, end:524606) CALCULATED DISTANCE APART: -5861743 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTTGTAGAAGAGGACTGAATA - TCTGCAACACAAATTTTATTT) on contig 31 (872282 nt) Astart:621506 Aend:621527 Bstart:635922 Bend:635901 CALCULATED DISTANCE APART: 14416 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#42 -> -1065090 <- tig#38, B=702743 nt (start:63153, end:63174) A=738226 nt (start:445500, end:445479) CALCULATED DISTANCE APART: -1065090 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#60 -> -1863797 <- tig#8, A=677274 nt (start:299116, end:299137) B=2829393 nt (start:1505639, end:1505618) CALCULATED DISTANCE APART: -1863797 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -754996 <- tig#125, B=3889777 nt (start:705574, end:705553) A=121823 nt (start:69422, end:69401) CALCULATED DISTANCE APART: -754996 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTACTTTTCTTGCGTCACTAT - TCCCTACGAGTTGTTAGCCTA) on contig 4 (3700243 nt) Astart:3271153 Aend:3271132 Bstart:3270573 Bend:3270552 Pairs unsatisfied in pairing logic within a contig. Pair (AGCTTCGATTTCTTGATCTGT - CTTGTTGGTTCCATAAAAAGA) on contig 3 (3848698 nt) Astart:145627 Aend:145648 Bstart:149878 Bend:149899 Pairs unsatisfied in distance within a contig. Pair (CAGCTGGATAAAGATTGATAG - GATGATAGAAAAAATTTATTC) on contig 24 (1160670 nt) Astart:429464 Aend:429443 Bstart:412161 Bend:412182 CALCULATED DISTANCE APART: 17303 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#58 -> -565010 <- tig#45, B=439424 nt (start:42101, end:42122) A=672231 nt (start:187687, end:187666) CALCULATED DISTANCE APART: -565010 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#2 -> -4424980 <- tig#4, A=3889777 nt (start:2682984, end:2683005) B=3700243 nt (start:3238187, end:3238166) CALCULATED DISTANCE APART: -4424980 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#84 -> -423606 <- tig#r.64, A=349037 nt (start:256484, end:256505) B=462404 nt (start:111351, end:111372) CALCULATED DISTANCE APART: -423606 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#73 -> -189531 <- tig#148, B=318307 nt (start:152351, end:152372) A=92005 nt (start:43575, end:43554) CALCULATED DISTANCE APART: -189531 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#103 -> -36764 <- tig#205, A=163531 nt (start:135032, end:135053) B=41546 nt (start:28265, end:28244) CALCULATED DISTANCE APART: -36764 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#3 -> -4540599 <- tig#17, B=3848698 nt (start:497541, end:497562) A=1742883 nt (start:1209442, end:1209421) CALCULATED DISTANCE APART: -4540599 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#19 -> -2197587 <- tig#32, B=1545896 nt (start:53385, end:53406) A=1165067 nt (start:725076, end:725055) CALCULATED DISTANCE APART: -2197587 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -1076976 <- tig#r.35, A=2095837 nt (start:1360211, end:1360232) B=828437 nt (start:467087, end:467108) CALCULATED DISTANCE APART: -1076976 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#3 -> -2726368 <- tig#13, A=3848698 nt (start:1787678, end:1787699) B=2095837 nt (start:685348, end:685327) CALCULATED DISTANCE APART: -2726368 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.63 -> -505778 <- tig#29, B=393958 nt (start:163422, end:163401) A=906229 nt (start:362356, end:362335) CALCULATED DISTANCE APART: -505778 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#10 -> -2013630 <- tig#13, A=2476307 nt (start:838493, end:838514) B=2095837 nt (start:395816, end:395795) CALCULATED DISTANCE APART: -2013630 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#516 -> -577519 <- tig#r.2, A=1768 nt (start:208, end:229) B=3889777 nt (start:3293818, end:3293839) CALCULATED DISTANCE APART: -577519 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#13 -> -1221729 <- tig#33, B=2095837 nt (start:1533684, end:1533705) A=1401011 nt (start:679576, end:679555) CALCULATED DISTANCE APART: -1221729 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAAAAAAAATTCCAACATAAT - TTCTCCTCCTCCCTTTTTTTC) on contig 17 (1742883 nt) Astart:1704389 Aend:1704410 Bstart:1721579 Bend:1721558 CALCULATED DISTANCE APART: 17190 Pairs unsatisfied in distance within a contig. Pair (TTTGTGCACATGCAATAACCG - AATCACGAGGAAAATAATGTT) on contig 13 (2095837 nt) Astart:871795 Aend:871816 Bstart:886833 Bend:886812 CALCULATED DISTANCE APART: 15038 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#20 -> -282335 <- tig#r.221, A=1524840 nt (start:1254111, end:1254132) B=34729 nt (start:3123, end:3144) CALCULATED DISTANCE APART: -282335 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ACCAACACAGAGAGTTCCGGT - GTAAAGGAAAAAAAAATGTAC) on contig 49 (529875 nt) Astart:384705 Aend:384726 Bstart:396052 Bend:396073 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#46 -> -434357 <- tig#r.232, A=658085 nt (start:209384, end:209405) B=32075 nt (start:26419, end:26440) CALCULATED DISTANCE APART: -434357 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#84 -> -423606 <- tig#r.64, A=349037 nt (start:256489, end:256510) B=462404 nt (start:111346, end:111367) CALCULATED DISTANCE APART: -423606 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CTCTCGTGAAGAAGAAAGAGT - ATCATTATCTCGCATGAGATC) on contig 7 (3089900 nt) Astart:2727167 Aend:2727146 Bstart:2725389 Bend:2725368 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.12 -> -3928444 <- tig#30, B=4252320 nt (start:3287955, end:3287934) A=874307 nt (start:660489, end:660468) CALCULATED DISTANCE APART: -3928444 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#48 -> -4593428 <- tig#4, B=1252891 nt (start:180989, end:181010) A=3700243 nt (start:3541526, end:3541505) CALCULATED DISTANCE APART: -4593428 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.68 -> -2620003 <- tig#7, B=360191 nt (start:47668, end:47647) A=3089900 nt (start:2592335, end:2592314) CALCULATED DISTANCE APART: -2620003 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AAGATATCAAAACTAAATTTT - ATGTTTAGCTTTTACTGATTT) on contig 78 (303746 nt) Astart:39876 Aend:39897 Bstart:42039 Bend:42060 Pairs unsatisfied in pairing logic within a contig. Pair (AGCAAGGAAGTAGGAACTAGT - GAGGTTAGAATCAAAGAACAG) on contig 83 (262564 nt) Astart:197550 Aend:197529 Bstart:196887 Bend:196866 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.36 -> -786728 <- tig#61, B=792826 nt (start:660538, end:660517) A=407835 nt (start:146190, end:146169) CALCULATED DISTANCE APART: -786728 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#15 -> -431297 <- tig#r.71, A=1925218 nt (start:1692126, end:1692147) B=340153 nt (start:121948, end:121969) CALCULATED DISTANCE APART: -431297 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#24 -> -1238658 <- tig#37, B=1160670 nt (start:369193, end:369214) A=792205 nt (start:467181, end:467160) CALCULATED DISTANCE APART: -1238658 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#6 -> -6040839 <- tig#9, A=3988516 nt (start:496579, end:496600) B=2687965 nt (start:2568902, end:2568881) CALCULATED DISTANCE APART: -6040839 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#88 -> -127551 <- tig#102, B=242874 nt (start:124878, end:124899) A=163766 nt (start:29555, end:29534) CALCULATED DISTANCE APART: -127551 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#37 -> -1637823 <- tig#18, A=792205 nt (start:249465, end:249486) B=1637738 nt (start:1115083, end:1115062) CALCULATED DISTANCE APART: -1637823 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -4792058 <- tig#3, B=2687965 nt (start:802155, end:802176) A=3848698 nt (start:2926248, end:2926227) CALCULATED DISTANCE APART: -4792058 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#47 -> -510795 <- tig#r.18, A=618158 nt (start:511608, end:511629) B=1637738 nt (start:1213493, end:1213514) CALCULATED DISTANCE APART: -510795 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.166 -> -120150 <- tig#117, B=75506 nt (start:35649, end:35628) A=138887 nt (start:104501, end:104480) CALCULATED DISTANCE APART: -120150 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#15 -> -1928257 <- tig#83, A=1925218 nt (start:36724, end:36745) B=262564 nt (start:59763, end:59742) CALCULATED DISTANCE APART: -1928257 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATAACCCATTTACAGTATTTA - AGAAATCATTATCTCATTCCT) on contig 73 (318307 nt) Astart:19780 Aend:19801 Bstart:17541 Bend:17562 Pairs unsatisfied in pairing logic within a contig. Pair (TGATGTTTTTTGTAATGACTG - TAGAATGTTCAGCAAAACTCA) on contig 58 (439424 nt) Astart:151694 Aend:151715 Bstart:155843 Bend:155864 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#96 -> -978226 <- tig#4, B=190542 nt (start:12056, end:12077) A=3700243 nt (start:819740, end:819719) CALCULATED DISTANCE APART: -978226 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TGAAAATTAATTAATTACTTA - AATACTGTAAGGAACAATTTG) on contig 1 (4799971 nt) Astart:819533 Aend:819554 Bstart:823355 Bend:823376 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#49 -> -1398162 <- tig#20, B=529875 nt (start:492795, end:492816) A=1524840 nt (start:1381082, end:1381061) CALCULATED DISTANCE APART: -1398162 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#12 -> -2689775 <- tig#77, B=4252320 nt (start:1572895, end:1572916) A=306905 nt (start:30350, end:30329) CALCULATED DISTANCE APART: -2689775 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GTGCCTGCAAGTTTGGATTCT - GAATCTCCGAAGAATTCTCTG) on contig 6 (3988516 nt) Astart:3476873 Aend:3476894 Bstart:3476075 Bend:3476096 Pairs unsatisfied in distance within a contig. Pair (AAGAAATCTATTTCAAAGCTA - TAACAAAAAATAAACTGTAAT) on contig 36 (792826 nt) Astart:189352 Aend:189331 Bstart:175714 Bend:175735 CALCULATED DISTANCE APART: 13638 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -774859 <- tig#r.145, A=2095837 nt (start:1360985, end:1361006) B=100618 nt (start:40611, end:40632) CALCULATED DISTANCE APART: -774859 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#93 -> -3149635 <- tig#12, A=203845 nt (start:176076, end:176097) B=4252320 nt (start:3141866, end:3141845) CALCULATED DISTANCE APART: -3149635 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#4 -> -497893 <- tig#155, B=3700243 nt (start:3216710, end:3216731) A=83971 nt (start:34360, end:34339) CALCULATED DISTANCE APART: -497893 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTGCGTCTTCCTTATGTAGAA - AAGAAGAAGACGAGCTAATTA) on contig 31 (872282 nt) Astart:619859 Aend:619880 Bstart:634231 Bend:634210 CALCULATED DISTANCE APART: 14372 Pairs unsatisfied in pairing logic within a contig. Pair (TTAGATTTGGGAAAATCTGAA - AAATATTTACATCAAAAAGAG) on contig 7 (3089900 nt) Astart:2726452 Aend:2726431 Bstart:2726083 Bend:2726062 Pairs unsatisfied in distance within a contig. Pair (CCATTCCAGAGAGACTTAGGG - TTACCGATCATCATACTAACT) on contig 33 (1401011 nt) Astart:912273 Aend:912294 Bstart:928003 Bend:927982 CALCULATED DISTANCE APART: 15730 Pairs unsatisfied in distance within a contig. Pair (GCAAAGAAGAAGAAAAATCAA - TACTATATCTATATGTTGAGT) on contig 63 (393958 nt) Astart:15000 Aend:15021 Bstart:23887 Bend:23866 CALCULATED DISTANCE APART: 8887 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#23 -> -1209825 <- tig#3, B=1298420 nt (start:1249143, end:1249164) A=3848698 nt (start:1180548, end:1180527) CALCULATED DISTANCE APART: -1209825 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TCTTCGACACTGCTGTTTGAT - AGTGAATGTAACCTAATATAG) on contig 5 (3413765 nt) Astart:13984 Aend:13963 Bstart:110874 Bend:110853 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#15 -> -1973919 <- tig#30, A=1925218 nt (start:546977, end:546998) B=874307 nt (start:615678, end:615657) CALCULATED DISTANCE APART: -1973919 < -2000 Pairs unsatisfied in distance within a contig. Pair (GAAGAAGAAAAATCAATACAT - TAAGTTACTATATCTATATGT) on contig 63 (393958 nt) Astart:15005 Aend:15026 Bstart:23892 Bend:23871 CALCULATED DISTANCE APART: 8887 Pairs unsatisfied in pairing logic within a contig. Pair (ACTTATATAATAAAAGGTTTT - GCTTTTGCCCGCTGCAAAGAT) on contig 2 (3889777 nt) Astart:3289055 Aend:3289034 Bstart:3282257 Bend:3282236 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#90 -> -236536 <- tig#r.63, A=305471 nt (start:183430, end:183451) B=393958 nt (start:259463, end:259484) CALCULATED DISTANCE APART: -236536 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#252 -> -451837 <- tig#35, B=24218 nt (start:185, end:206) A=828437 nt (start:447804, end:447783) CALCULATED DISTANCE APART: -451837 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#39 -> -1794905 <- tig#r.4, A=722869 nt (start:627896, end:627917) B=3700243 nt (start:1980311, end:1980332) CALCULATED DISTANCE APART: -1794905 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#50 -> -1252927 <- tig#21, B=498313 nt (start:414512, end:414533) A=1453855 nt (start:1189126, end:1189105) CALCULATED DISTANCE APART: -1252927 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -995197 <- tig#10, A=722869 nt (start:624759, end:624780) B=2476307 nt (start:917087, end:917066) CALCULATED DISTANCE APART: -995197 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#150 -> -1589254 <- tig#8, A=91302 nt (start:84755, end:84776) B=2829393 nt (start:1602707, end:1602686) CALCULATED DISTANCE APART: -1589254 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCAAAGCTCTTGTTTGTATTG - AGAGAATTGACCAACGAAAAC) on contig 6 (3988516 nt) Astart:862962 Aend:862941 Bstart:847504 Bend:847525 CALCULATED DISTANCE APART: 15458 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -2821488 <- tig#14, B=2687965 nt (start:414839, end:414860) A=2017548 nt (start:568362, end:568341) CALCULATED DISTANCE APART: -2821488 < -2000 Pairs unsatisfied in distance within a contig. Pair (TACAAAAAAACGTTAAACTTC - CCAGAAGATTATGAAATTTTA) on contig 4 (3700243 nt) Astart:757566 Aend:757587 Bstart:771261 Bend:771240 CALCULATED DISTANCE APART: 13695 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -585421 <- tig#49, B=916743 nt (start:584229, end:584250) A=529875 nt (start:272907, end:272886) CALCULATED DISTANCE APART: -585421 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.3 -> -1495291 <- tig#64, B=3848698 nt (start:1364249, end:1364228) A=462404 nt (start:151042, end:151021) CALCULATED DISTANCE APART: -1495291 < -2000 Pairs unsatisfied in distance within a contig. Pair (GGCTCATCATGAATTCGGCAA - CCAAACTTATCGACGATTTTC) on contig 22 (1296783 nt) Astart:478984 Aend:479005 Bstart:493937 Bend:493916 CALCULATED DISTANCE APART: 14953 Pairs unsatisfied in distance within a contig. Pair (TAGAATCATATGATCTTGTTT - CTGCAATGGCATTTGGATCCT) on contig 90 (305471 nt) Astart:263914 Aend:263935 Bstart:280851 Bend:280830 CALCULATED DISTANCE APART: 16937 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.19 -> -623438 <- tig#23, B=1545896 nt (start:512061, end:512040) A=1298420 nt (start:131377, end:131356) CALCULATED DISTANCE APART: -623438 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#205 -> -128349 <- tig#103, A=41546 nt (start:28246, end:28267) B=163531 nt (start:135049, end:135028) CALCULATED DISTANCE APART: -128349 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -3918969 <- tig#65, B=3889777 nt (start:3779577, end:3779556) A=411873 nt (start:159392, end:159371) CALCULATED DISTANCE APART: -3918969 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#193 -> -16234 <- tig#84, B=48386 nt (start:13626, end:13647) A=349037 nt (start:1474, end:1453) CALCULATED DISTANCE APART: -16234 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#9 -> -2420031 <- tig#r.11, A=2687965 nt (start:2331777, end:2331798) B=2258275 nt (start:174432, end:174453) CALCULATED DISTANCE APART: -2420031 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATAGTTTGCATACAAAAAAAC - ATGAAATTTTAAGATCAAGAC) on contig 4 (3700243 nt) Astart:757556 Aend:757577 Bstart:771251 Bend:771230 CALCULATED DISTANCE APART: 13695 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#12 -> -3285728 <- tig#48, B=4252320 nt (start:2093479, end:2093500) A=1252891 nt (start:1146887, end:1146866) CALCULATED DISTANCE APART: -3285728 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTTGTATGTGACTTTTTTTTT - TATATTGTGAAAAAATACTTT) on contig 7 (3089900 nt) Astart:692028 Aend:692049 Bstart:692232 Bend:692211 CALCULATED DISTANCE APART: 204 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -879730 <- tig#3, B=677274 nt (start:338565, end:338544) A=3848698 nt (start:561165, end:561144) CALCULATED DISTANCE APART: -879730 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#193 -> -16231 <- tig#84, B=48386 nt (start:13341, end:13362) A=349037 nt (start:1186, end:1165) CALCULATED DISTANCE APART: -16231 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#4 -> -2057677 <- tig#52, A=3700243 nt (start:1930354, end:1930375) B=490129 nt (start:307788, end:307767) CALCULATED DISTANCE APART: -2057677 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -3132611 <- tig#10, A=2829393 nt (start:800253, end:800274) B=2476307 nt (start:1123471, end:1123450) CALCULATED DISTANCE APART: -3132611 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TGCAAGTTTGGATTCTACGAG - CCATGGAATCTCCGAAGAATT) on contig 6 (3988516 nt) Astart:3476878 Aend:3476899 Bstart:3476070 Bend:3476091 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.3 -> -6471922 <- tig#12, B=3848698 nt (start:2426738, end:2426717) A=4252320 nt (start:4065184, end:4065163) CALCULATED DISTANCE APART: -6471922 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#19 -> -1253529 <- tig#82, B=1545896 nt (start:383541, end:383562) A=359103 nt (start:111174, end:111153) CALCULATED DISTANCE APART: -1253529 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#25 -> -2904828 <- tig#9, B=1894032 nt (start:1281441, end:1281462) A=2687965 nt (start:2312237, end:2312216) CALCULATED DISTANCE APART: -2904828 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#15 -> -663115 <- tig#96, B=1925218 nt (start:1269694, end:1269715) A=190542 nt (start:27591, end:27570) CALCULATED DISTANCE APART: -663115 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCGAAAAAACATCAATTTTTA - TTATAAACTTCGTGTCATGCA) on contig 6 (3988516 nt) Astart:1140784 Aend:1140763 Bstart:1132760 Bend:1132781 CALCULATED DISTANCE APART: 8024 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#4 -> -120543 <- tig#996, B=3700243 nt (start:3560372, end:3560393) A=908 nt (start:672, end:651) CALCULATED DISTANCE APART: -120543 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CAGATTTCTTCATCAGAGTAT - GGTAACTTACTCCTTTTGGTT) on contig 24 (1160670 nt) Astart:870024 Aend:870045 Bstart:308926 Bend:308947 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.65 -> -1169529 <- tig#19, B=411873 nt (start:333631, end:333610) A=1545896 nt (start:855898, end:855877) CALCULATED DISTANCE APART: -1169529 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#89 -> -287687 <- tig#64, B=343084 nt (start:279278, end:279299) A=462404 nt (start:243881, end:243860) CALCULATED DISTANCE APART: -287687 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTTGGAGTGGTATCAAAGACA - TTTTGGACATTTAAATAACAA) on contig 63 (393958 nt) Astart:290485 Aend:290464 Bstart:273754 Bend:273775 CALCULATED DISTANCE APART: 16731 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#4 -> -1199795 <- tig#22, A=3700243 nt (start:3544310, end:3544331) B=1296783 nt (start:1063862, end:1063841) CALCULATED DISTANCE APART: -1199795 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -3335725 <- tig#1, A=2829393 nt (start:1277610, end:1277631) B=4799971 nt (start:1803942, end:1803921) CALCULATED DISTANCE APART: -3335725 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GATTTAGGCTCCTACAGATCT - GGGGTTAGGTATGTTAATACA) on contig 41 (710158 nt) Astart:26089 Aend:26110 Bstart:25416 Bend:25437 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#74 -> -1170828 <- tig#9, B=317083 nt (start:310520, end:310541) A=2687965 nt (start:1184265, end:1184244) CALCULATED DISTANCE APART: -1170828 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.20 -> -1483923 <- tig#64, B=1524840 nt (start:1402933, end:1402912) A=462404 nt (start:100990, end:100969) CALCULATED DISTANCE APART: -1483923 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#55 -> -467805 <- tig#9, B=473235 nt (start:223087, end:223108) A=2687965 nt (start:237657, end:237636) CALCULATED DISTANCE APART: -467805 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ACGCAATCCCCAACCCAAAGA - CTGAGATAAGCTCATCTTTCA) on contig 6 (3988516 nt) Astart:3477418 Aend:3477439 Bstart:3475484 Bend:3475505 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#1 -> -1058923 <- tig#33, A=4799971 nt (start:4500002, end:4500023) B=1401011 nt (start:778954, end:778933) CALCULATED DISTANCE APART: -1058923 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATGCTGAGACGGAATACAATT - TTTTGATGGTAATATCTCTTG) on contig 57 (453946 nt) Astart:134944 Aend:134965 Bstart:150571 Bend:150550 CALCULATED DISTANCE APART: 15627 Pairs unsatisfied in pairing logic within a contig. Pair (CCGTGAATACGGGAATTTTGG - AACCGATCATTCACCGTGATC) on contig 13 (2095837 nt) Astart:1421636 Aend:1421615 Bstart:1420464 Bend:1420443 Pairs unsatisfied in distance within a contig. Pair (CTCTTTTTTAGTATCTGCATT - TTGGAATCTAAAGATTTCAGC) on contig 9 (2687965 nt) Astart:676189 Aend:676168 Bstart:660278 Bend:660299 CALCULATED DISTANCE APART: 15911 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -1067073 <- tig#47, B=2258275 nt (start:787175, end:787154) A=618158 nt (start:299898, end:299877) CALCULATED DISTANCE APART: -1067073 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CTTTGTTATAGAGGTGTGTTT - CTGTGTAAAGTTAATGTACAA) on contig 3 (3848698 nt) Astart:296326 Aend:296347 Bstart:313562 Bend:313583 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#10 -> -1452503 <- tig#23, B=2476307 nt (start:1683134, end:1683155) A=1298420 nt (start:679330, end:679309) CALCULATED DISTANCE APART: -1452503 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATATACTGGAAACACATATAT - CTTATCTTTCATGGTATTGTC) on contig 57 (453946 nt) Astart:135001 Aend:135022 Bstart:150626 Bend:150605 CALCULATED DISTANCE APART: 15625 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#178 -> -57536 <- tig#70, A=62189 nt (start:281, end:302) B=350721 nt (start:15628, end:15607) CALCULATED DISTANCE APART: -57536 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#35 -> -249824 <- tig#70, A=828437 nt (start:671009, end:671030) B=350721 nt (start:112396, end:112375) CALCULATED DISTANCE APART: -249824 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#12 -> -3399436 <- tig#5, B=4252320 nt (start:3971510, end:3971531) A=3413765 nt (start:3138626, end:3138605) CALCULATED DISTANCE APART: -3399436 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.41 -> -382785 <- tig#148, B=710158 nt (start:392249, end:392228) A=92005 nt (start:10536, end:10515) CALCULATED DISTANCE APART: -382785 < -2000 Pairs unsatisfied in distance within a contig. Pair (ACGAGCCATTCCAGAGAGACT - GATCATCATACTAACTTCTGT) on contig 33 (1401011 nt) Astart:912268 Aend:912289 Bstart:927998 Bend:927977 CALCULATED DISTANCE APART: 15730 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#6 -> -3669980 <- tig#12, B=3988516 nt (start:330538, end:330559) A=4252320 nt (start:32002, end:31981) CALCULATED DISTANCE APART: -3669980 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#93 -> -210866 <- tig#16, B=203845 nt (start:99771, end:99792) A=1744109 nt (start:126792, end:126771) CALCULATED DISTANCE APART: -210866 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#2 -> -4270528 <- tig#3, B=3889777 nt (start:910435, end:910456) A=3848698 nt (start:1311186, end:1311165) CALCULATED DISTANCE APART: -4270528 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#24 -> -2027022 <- tig#9, B=1160670 nt (start:358527, end:358548) A=2687965 nt (start:1244879, end:1244858) CALCULATED DISTANCE APART: -2027022 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#6 -> -7234371 <- tig#4, A=3988516 nt (start:355128, end:355149) B=3700243 nt (start:3620983, end:3620962) CALCULATED DISTANCE APART: -7234371 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCTCGAAATATCATTTTCCTA - TGATTGTCGAGTTTATCAAAA) on contig 24 (1160670 nt) Astart:43565 Aend:43586 Bstart:59185 Bend:59164 CALCULATED DISTANCE APART: 15620 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -1941812 <- tig#77, A=1894032 nt (start:130360, end:130381) B=306905 nt (start:198140, end:198119) CALCULATED DISTANCE APART: -1941812 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.7 -> -2018112 <- tig#17, B=3089900 nt (start:821690, end:821669) A=1742883 nt (start:1216422, end:1216401) CALCULATED DISTANCE APART: -2018112 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -1248714 <- tig#r.18, A=4252320 nt (start:3655850, end:3655871) B=1637738 nt (start:965494, end:965515) CALCULATED DISTANCE APART: -1248714 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -1641600 <- tig#r.6, A=4252320 nt (start:4030899, end:4030920) B=3988516 nt (start:2548337, end:2548358) CALCULATED DISTANCE APART: -1641600 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GGTGCTTTAGTTTATGAGTAC - CTCTCGGGCTTCTCAACAAGC) on contig 13 (2095837 nt) Astart:1420615 Aend:1420594 Bstart:1421573 Bend:1421552 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.25 -> -2353764 <- tig#2, B=1894032 nt (start:1768681, end:1768660) A=3889777 nt (start:605083, end:605062) CALCULATED DISTANCE APART: -2353764 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#6 -> -2103099 <- tig#109, B=3988516 nt (start:1977081, end:1977102) A=149513 nt (start:111664, end:111643) CALCULATED DISTANCE APART: -2103099 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#52 -> -634002 <- tig#r.69, A=490129 nt (start:62316, end:62337) B=356702 nt (start:130513, end:130534) CALCULATED DISTANCE APART: -634002 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.4 -> -2575690 <- tig#11, B=3700243 nt (start:1745552, end:1745531) A=2258275 nt (start:850138, end:850117) CALCULATED DISTANCE APART: -2575690 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -1482768 <- tig#r.38, A=2095837 nt (start:745320, end:745341) B=738226 nt (start:585975, end:585996) CALCULATED DISTANCE APART: -1482768 < -2000 Pairs unsatisfied in distance within a contig. Pair (AATTTTACAGAGTGTTTATAT - ATGAAGAATTAAAGTATTTTT) on contig 1 (4799971 nt) Astart:1791435 Aend:1791456 Bstart:1803429 Bend:1803408 CALCULATED DISTANCE APART: 11994 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#11 -> -2749382 <- tig#3, B=2258275 nt (start:376064, end:376085) A=3848698 nt (start:887171, end:887150) CALCULATED DISTANCE APART: -2749382 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CTGCCTTTTCTATGGTGATGG - CATAACCATCTCTGTGGGAGG) on contig 8 (2829393 nt) Astart:1584865 Aend:1584844 Bstart:1566339 Bend:1566318 Pairs unsatisfied in distance within a contig. Pair (TATTATTGGCAGACTCGGCTA - CCATGTCAAGTGCAAGCCTCA) on contig 16 (1744109 nt) Astart:452749 Aend:452728 Bstart:438472 Bend:438493 CALCULATED DISTANCE APART: 14277 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.12 -> -4444308 <- tig#2, B=4252320 nt (start:1981300, end:1981279) A=3889777 nt (start:2483008, end:2482987) CALCULATED DISTANCE APART: -4444308 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATTTTTTTTATGTCAATTAGT - TGAAGCTGAGGCAATTGCTGC) on contig 14 (2017548 nt) Astart:844186 Aend:844165 Bstart:826244 Bend:826265 CALCULATED DISTANCE APART: 17942 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.4 -> -2314969 <- tig#27, B=3700243 nt (start:1685366, end:1685345) A=1116231 nt (start:649603, end:649582) CALCULATED DISTANCE APART: -2314969 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.83 -> -2035721 <- tig#8, B=262564 nt (start:68727, end:68706) A=2829393 nt (start:1986994, end:1986973) CALCULATED DISTANCE APART: -2035721 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#17 -> -2057357 <- tig#37, B=1742883 nt (start:285886, end:285907) A=792205 nt (start:620360, end:620339) CALCULATED DISTANCE APART: -2057357 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#21 -> -1608757 <- tig#20, A=1453855 nt (start:40244, end:40265) B=1524840 nt (start:215146, end:215125) CALCULATED DISTANCE APART: -1608757 < -2000 Pairs unsatisfied in distance within a contig. Pair (GAAAGGGCCAGCCATAAGTGG - ACGGTCTATGGTTTTCATAGA) on contig 1 (4799971 nt) Astart:1927223 Aend:1927202 Bstart:1912970 Bend:1912991 CALCULATED DISTANCE APART: 14253 Pairs unsatisfied in pairing logic within a contig. Pair (TTTGGGAAAATCTGAAAACCT - TAAAAAAATATTTACATCAAA) on contig 7 (3089900 nt) Astart:2726447 Aend:2726426 Bstart:2726088 Bend:2726067 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#19 -> -1246607 <- tig#r.101, A=1545896 nt (start:389704, end:389725) B=173584 nt (start:63169, end:63190) CALCULATED DISTANCE APART: -1246607 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#66 -> -662422 <- tig#37, A=365505 nt (start:53317, end:53338) B=792205 nt (start:370234, end:370213) CALCULATED DISTANCE APART: -662422 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTGAAGCCCAAGGCAACAACA - TACTATTTCAATGTTCTAAAG) on contig 6 (3988516 nt) Astart:1141017 Aend:1140996 Bstart:1132996 Bend:1133017 CALCULATED DISTANCE APART: 8021 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#6 -> -1262574 <- tig#2, B=3988516 nt (start:3187670, end:3187691) A=3889777 nt (start:481728, end:481707) CALCULATED DISTANCE APART: -1262574 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -3995237 <- tig#20, B=2687965 nt (start:53035, end:53056) A=1524840 nt (start:1380307, end:1380286) CALCULATED DISTANCE APART: -3995237 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#2 -> -6203044 <- tig#5, B=3889777 nt (start:44530, end:44551) A=3413765 nt (start:2377797, end:2377776) CALCULATED DISTANCE APART: -6203044 < -2000 Pairs unsatisfied in distance within a contig. Pair (GAATCACGAGAAATTGTTTTT - GTCAGCCACCGCCGCCGCCTC) on contig 23 (1298420 nt) Astart:925454 Aend:925475 Bstart:941598 Bend:941577 CALCULATED DISTANCE APART: 16144 Pairs unsatisfied in pairing logic within a contig. Pair (ATTTTCTTAGTGAATTCTATT - ATAAAATTCCAAAGAATATAT) on contig 21 (1453855 nt) Astart:162043 Aend:162064 Bstart:171378 Bend:171399 Pairs unsatisfied in distance within a contig. Pair (AAGATACCTATTTTTATGTAA - GAAATTAGGTAAGAATTGAGA) on contig 38 (738226 nt) Astart:348540 Aend:348519 Bstart:331573 Bend:331594 CALCULATED DISTANCE APART: 16967 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#56 -> -1273850 <- tig#24, A=468413 nt (start:226800, end:226821) B=1160670 nt (start:1052237, end:1052216) CALCULATED DISTANCE APART: -1273850 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.1 -> -2587099 <- tig#218, B=4799971 nt (start:2600708, end:2600687) A=35338 nt (start:6391, end:6370) CALCULATED DISTANCE APART: -2587099 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#4 -> -106235 <- tig#r.52, A=3700243 nt (start:3619452, end:3619473) B=490129 nt (start:444685, end:444706) CALCULATED DISTANCE APART: -106235 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#164 -> -788450 <- tig#2, A=77412 nt (start:45165, end:45186) B=3889777 nt (start:776203, end:776182) CALCULATED DISTANCE APART: -788450 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#39 -> -77223 <- tig#r.464, A=722869 nt (start:625831, end:625852) B=2158 nt (start:1973, end:1994) CALCULATED DISTANCE APART: -77223 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -1418114 <- tig#3, B=2687965 nt (start:591042, end:591021) A=3848698 nt (start:847072, end:847051) CALCULATED DISTANCE APART: -1418114 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -746505 <- tig#20, A=722869 nt (start:624916, end:624937) B=1524840 nt (start:668552, end:668531) CALCULATED DISTANCE APART: -746505 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CGAGGTGAACAGAAGCTTTTA - GCAAGGTAGTAGTTATCGTAA) on contig 4 (3700243 nt) Astart:755291 Aend:755312 Bstart:755599 Bend:755620 Pairs unsatisfied in distance within a contig. Pair (ACTAGTCTAACCATCCCTTTG - TAAATGATTTAAGATGTATCA) on contig 135 (110204 nt) Astart:72868 Aend:72847 Bstart:61841 Bend:61862 CALCULATED DISTANCE APART: 11027 Pairs unsatisfied in pairing logic within a contig. Pair (TTTCTTGAAAATTAATTAATT - TGTAAGGAACAATTTGCGGTT) on contig 1 (4799971 nt) Astart:819528 Aend:819549 Bstart:823360 Bend:823381 Pairs unsatisfied in distance within a contig. Pair (CTCACTGTTTTTTCTTTTCCT - TAGGGCACCAAGGACCAGGTT) on contig 72 (488863 nt) Astart:468861 Aend:468840 Bstart:455276 Bend:455297 CALCULATED DISTANCE APART: 13585 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#6 -> -1605763 <- tig#155, A=3988516 nt (start:2380407, end:2380428) B=83971 nt (start:17654, end:17633) CALCULATED DISTANCE APART: -1605763 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#199 -> -329057 <- tig#66, B=44760 nt (start:19488, end:19509) A=365505 nt (start:323785, end:323764) CALCULATED DISTANCE APART: -329057 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATTCAATTACCATTGCAACCA - ATTCAGTAGTTGTCTTTTGTA) on contig 57 (453946 nt) Astart:126398 Aend:126377 Bstart:118999 Bend:118978 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#51 -> -865413 <- tig#33, A=497268 nt (start:415243, end:415264) B=1401011 nt (start:803388, end:803367) CALCULATED DISTANCE APART: -865413 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AAAAAGCTTTCCAAATTCTGG - TACGAAGGCGATGGTTACAAG) on contig 11 (2258275 nt) Astart:2064026 Aend:2064047 Bstart:2074312 Bend:2074333 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -585418 <- tig#49, B=916743 nt (start:584746, end:584767) A=529875 nt (start:273421, end:273400) CALCULATED DISTANCE APART: -585418 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCTTTGTGAGCCATGACTTTG - CCACGATGATGCAATCAATGC) on contig 1 (4799971 nt) Astart:2566842 Aend:2566863 Bstart:2584727 Bend:2584706 CALCULATED DISTANCE APART: 17885 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#76 -> -345519 <- tig#r.40, A=309514 nt (start:244297, end:244318) B=717909 nt (start:417607, end:417628) CALCULATED DISTANCE APART: -345519 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#146 -> -61419 <- tig#147, A=173632 nt (start:172717, end:172738) B=92417 nt (start:80504, end:80483) CALCULATED DISTANCE APART: -61419 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATGAGATTATTAGTGAAGCTC - TGATATCACAGCTTAGCAGAA) on contig 7 (3089900 nt) Astart:330869 Aend:330848 Bstart:329296 Bend:329275 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.7 -> -2863282 <- tig#64, B=3089900 nt (start:2786762, end:2786741) A=462404 nt (start:96520, end:96499) CALCULATED DISTANCE APART: -2863282 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#12 -> -1559493 <- tig#18, B=4252320 nt (start:2912877, end:2912898) A=1637738 nt (start:240050, end:240029) CALCULATED DISTANCE APART: -1559493 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.91 -> -3482002 <- tig#4, B=214867 nt (start:47580, end:47559) A=3700243 nt (start:3454422, end:3454401) CALCULATED DISTANCE APART: -3482002 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TCATTGTGGGAGTGTTTGAAA - ATTCCTTCCGACCAACCCTCG) on contig 25 (1894032 nt) Astart:1736746 Aend:1736725 Bstart:1733288 Bend:1733267 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#5 -> -2643874 <- tig#442, A=3413765 nt (start:750199, end:750220) B=2459 nt (start:308, end:287) CALCULATED DISTANCE APART: -2643874 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -2680564 <- tig#77, B=3889777 nt (start:2604119, end:2604098) A=306905 nt (start:96445, end:96424) CALCULATED DISTANCE APART: -2680564 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#65 -> -365334 <- tig#117, B=411873 nt (start:132177, end:132198) A=138887 nt (start:105638, end:105617) CALCULATED DISTANCE APART: -365334 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#154 -> -632158 <- tig#r.35, A=84292 nt (start:9797, end:9818) B=828437 nt (start:250774, end:250795) CALCULATED DISTANCE APART: -632158 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CAGTTGCAAGATATTCAGGAG - GAATCATCCAAATCTTGTGAA) on contig 4 (3700243 nt) Astart:756559 Aend:756580 Bstart:754661 Bend:754682 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#14 -> -1664829 <- tig#79, A=2017548 nt (start:532907, end:532928) B=300950 nt (start:200188, end:200167) CALCULATED DISTANCE APART: -1664829 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#2 -> -3036970 <- tig#r.18, A=3889777 nt (start:1666331, end:1666352) B=1637738 nt (start:804214, end:804235) CALCULATED DISTANCE APART: -3036970 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#9 -> -3820874 <- tig#r.16, A=2687965 nt (start:415471, end:415492) B=1744109 nt (start:175729, end:175750) CALCULATED DISTANCE APART: -3820874 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTTGAATGTATTATCTCTTTC - ATCTGGGAGCGAAAGAGACGG) on contig 16 (1744109 nt) Astart:1071451 Aend:1071472 Bstart:1074821 Bend:1074842 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -2211811 <- tig#r.14, A=2095837 nt (start:1354287, end:1354308) B=2017548 nt (start:527287, end:527308) CALCULATED DISTANCE APART: -2211811 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -6183486 <- tig#5, B=3889777 nt (start:3212475, end:3212454) A=3413765 nt (start:2991011, end:2990990) CALCULATED DISTANCE APART: -6183486 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAAACGATGACTTGACGAAAT - GGATCCATCTCTAGAGCCGTC) on contig 37 (792205 nt) Astart:709400 Aend:709421 Bstart:724522 Bend:724501 CALCULATED DISTANCE APART: 15122 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.1 -> -1417198 <- tig#9, B=4799971 nt (start:252768, end:252747) A=2687965 nt (start:1184430, end:1184409) CALCULATED DISTANCE APART: -1417198 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.6 -> -975224 <- tig#29, B=3988516 nt (start:632741, end:632720) A=906229 nt (start:362483, end:362462) CALCULATED DISTANCE APART: -975224 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GAATAGCTTCTCTTGAGAGTA - TAAGTTGTAACTAAAAGATGA) on contig 7 (3089900 nt) Astart:1299347 Aend:1299326 Bstart:1294782 Bend:1294761 Pairs unsatisfied in pairing logic within a contig. Pair (TCTGGATTTCTTGTGACCTGA - GGGTTCGAATTTCACGAAACT) on contig 3 (3848698 nt) Astart:1386421 Aend:1386400 Bstart:1374326 Bend:1374305 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#60 -> -368458 <- tig#67, A=677274 nt (start:553598, end:553619) B=362727 nt (start:264782, end:264761) CALCULATED DISTANCE APART: -368458 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#4 -> -4095103 <- tig#r.22, A=3700243 nt (start:498787, end:498808) B=1296783 nt (start:383136, end:383157) CALCULATED DISTANCE APART: -4095103 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGATTGTGCATGATGTTGTGC - GGCTCCAAAGTTTGAGAAGAA) on contig 12 (4252320 nt) Astart:477392 Aend:477371 Bstart:465242 Bend:465221 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#7 -> -2864331 <- tig#r.3, A=3089900 nt (start:423512, end:423533) B=3848698 nt (start:3630755, end:3630776) CALCULATED DISTANCE APART: -2864331 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#10 -> -2420509 <- tig#4, A=2476307 nt (start:841374, end:841395) B=3700243 nt (start:805576, end:805555) CALCULATED DISTANCE APART: -2420509 < -2000 Pairs unsatisfied in distance within a contig. Pair (GGCCGAATGGGTTGTAACTTT - AAGATAAAAACACATAATAAA) on contig 5 (3413765 nt) Astart:912765 Aend:912786 Bstart:927300 Bend:927279 CALCULATED DISTANCE APART: 14535 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#21 -> -1627240 <- tig#r.32, A=1453855 nt (start:98934, end:98955) B=1165067 nt (start:872748, end:872769) CALCULATED DISTANCE APART: -1627240 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#2 -> -4223929 <- tig#39, A=3889777 nt (start:296481, end:296502) B=722869 nt (start:650633, end:650612) CALCULATED DISTANCE APART: -4223929 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#93 -> -1240430 <- tig#12, B=203845 nt (start:105570, end:105591) A=4252320 nt (start:1162155, end:1162134) CALCULATED DISTANCE APART: -1240430 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#7 -> -3248194 <- tig#r.1, A=3089900 nt (start:1840434, end:1840455) B=4799971 nt (start:2781243, end:2781264) CALCULATED DISTANCE APART: -3248194 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CGTGCATGTTATATTTTTCTC - CGGACTTAAGTCCTCCGCTGC) on contig 9 (2687965 nt) Astart:1146422 Aend:1146443 Bstart:1150967 Bend:1150988 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#27 -> -912000 <- tig#r.271, A=1116231 nt (start:198069, end:198090) B=19540 nt (start:5702, end:5723) CALCULATED DISTANCE APART: -912000 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#16 -> -1619743 <- tig#19, B=1744109 nt (start:317473, end:317494) A=1545896 nt (start:213107, end:213086) CALCULATED DISTANCE APART: -1619743 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATTTAATGAAGATAGAAGAAA - TACCAATTGATCTGATGATGA) on contig 24 (1160670 nt) Astart:316833 Aend:316812 Bstart:299763 Bend:299784 CALCULATED DISTANCE APART: 17070 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#8 -> -2559463 <- tig#r.93, A=2829393 nt (start:372647, end:372668) B=203845 nt (start:81128, end:81149) CALCULATED DISTANCE APART: -2559463 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AAAAAAAATAGAGAGTGTATT - AAAACATTGCTAGTTTCTCCA) on contig 57 (453946 nt) Astart:125033 Aend:125012 Bstart:120309 Bend:120288 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#60 -> -2115548 <- tig#11, A=677274 nt (start:225621, end:225642) B=2258275 nt (start:1683895, end:1683874) CALCULATED DISTANCE APART: -2115548 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.16 -> -773836 <- tig#77, B=1744109 nt (start:674564, end:674543) A=306905 nt (start:119272, end:119251) CALCULATED DISTANCE APART: -773836 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#10 -> -3322962 <- tig#r.1, A=2476307 nt (start:621553, end:621574) B=4799971 nt (start:3311763, end:3311784) CALCULATED DISTANCE APART: -3322962 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TGCAACGATGAGTCTCCGATC - TGATTCTATGATTATATACTA) on contig 57 (453946 nt) Astart:125901 Aend:125880 Bstart:119471 Bend:119450 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#15 -> -1182949 <- tig#8, A=1925218 nt (start:1652442, end:1652463) B=2829393 nt (start:930173, end:930152) CALCULATED DISTANCE APART: -1182949 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#4 -> -2214793 <- tig#r.40, A=3700243 nt (start:1525534, end:1525555) B=717909 nt (start:657825, end:657846) CALCULATED DISTANCE APART: -2214793 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#34 -> -2841070 <- tig#9, B=868147 nt (start:208304, end:208325) A=2687965 nt (start:2201227, end:2201206) CALCULATED DISTANCE APART: -2841070 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.4 -> -4509157 <- tig#3, B=3700243 nt (start:3188989, end:3188968) A=3848698 nt (start:1340168, end:1340147) CALCULATED DISTANCE APART: -4509157 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GTACCATTCCAGTATACATTA - GAGAAACAATCAAGACTATCA) on contig 5 (3413765 nt) Astart:2634755 Aend:2634734 Bstart:2616441 Bend:2616420 ------------- Putative issues with contig pairing - Summary ---------------- Pair f2-f5 has 7 links and mean distance = -6327799.71428571 Pair f36-f353 has 6 links and mean distance = -605745 Pair f193-f84 has 5 links and mean distance = -16230.6 Pair f10-r11 has 5 links and mean distance = -1370812 Pair f15-f83 has 5 links and mean distance = -1776351.2 Pair f42-f38 has 5 links and mean distance = -1065073.8 Pair r68-f7 has 5 links and mean distance = -2619912.6 Pair f1-f461 has 4 links and mean distance = -4497500 Pair f62-f56 has 4 links and mean distance = -706548 Pair r166-f117 has 4 links and mean distance = -120147 Pair r12-f30 has 4 links and mean distance = -3928463.5 Pair f28-f49 has 4 links and mean distance = -585420 Pair r25-f2 has 4 links and mean distance = -2353770 Pair f5-f442 has 4 links and mean distance = -2643836 Pair f8-r93 has 4 links and mean distance = -2559438 Pair f150-f8 has 3 links and mean distance = -1589254 Pair f15-f24 has 3 links and mean distance = -765533 Pair f92-f48 has 3 links and mean distance = -1138824.66666667 Pair f8-r17 has 3 links and mean distance = -2947491 Pair f9-f5 has 3 links and mean distance = -4563431 Pair f4-f34 has 3 links and mean distance = -1036574 Pair r13-f9 has 3 links and mean distance = -3138279.66666667 Pair r4-f27 has 2 links and mean distance = -2470464.5 Pair f25-f4 has 2 links and mean distance = -1515580.5 Pair f30-r50 has 2 links and mean distance = -3059 Pair f3-f12 has 2 links and mean distance = -3092246 Pair f58-f45 has 2 links and mean distance = -565010 Pair r31-f856 has 2 links and mean distance = -387801 Pair f16-f4 has 2 links and mean distance = -4218273 Pair f1-f33 has 2 links and mean distance = -2040266 Pair f12-r72 has 2 links and mean distance = -2447701.5 Pair f8-f15 has 2 links and mean distance = -3494699.5 Pair r31-f9 has 2 links and mean distance = -2740836.5 Pair f12-f107 has 2 links and mean distance = -2656123 Pair f8-f1 has 2 links and mean distance = -3335725 Pair f88-f102 has 2 links and mean distance = -127551 Pair f96-f4 has 2 links and mean distance = -978226 Pair f231-f175 has 2 links and mean distance = -40266.5 Pair r9-f448 has 2 links and mean distance = -190994 Pair f3-f6 has 2 links and mean distance = -2940111 Pair f2-f4 has 2 links and mean distance = -4327314.5 Pair f1-f11 has 2 links and mean distance = -4022098 Pair f9-f14 has 2 links and mean distance = -2651144 Pair f6-f4 has 2 links and mean distance = -5139101 Pair r8-f14 has 2 links and mean distance = -1866586 Pair r3-f19 has 2 links and mean distance = -3314829 Pair f84-r64 has 2 links and mean distance = -423606 Pair f1-f23 has 2 links and mean distance = -3288011.5 Pair f26-f93 has 2 links and mean distance = -560723.5 Pair f2-f20 has 2 links and mean distance = -3345176.5 Pair f93-f12 has 2 links and mean distance = -2195032.5 Pair f4-f13 has 2 links and mean distance = -754345.5 Pair f20-f79 has 2 links and mean distance = -296822 Pair f2-r1 has 2 links and mean distance = -5161694 Pair f20-r69 has 2 links and mean distance = -3671 Pair f3-r24 has 2 links and mean distance = -3838681 Pair r48-f1 has 2 links and mean distance = -2141226.5 Pair f12-f15 has 2 links and mean distance = -2586393 Pair f10-f33 has 2 links and mean distance = -872708.5 Pair r40-f1 has 2 links and mean distance = -2320668 Pair f12-r13 has 2 links and mean distance = -4041321.5 Pair f99-f215 has 2 links and mean distance = -29210 Pair f195-f61 has 2 links and mean distance = -76171 Pair r83-f8 has 2 links and mean distance = -2035721 Pair r3-f12 has 2 links and mean distance = -4373449.5 Pair f21-f20 has 2 links and mean distance = -1608757 Pair f4-r1 has 2 links and mean distance = -3943976 Pair f27-r271 has 2 links and mean distance = -912000 Pair f15-f8 has 2 links and mean distance = -1781561 Pair f2-f3 has 2 links and mean distance = -4312859 Pair f5-r6 has 2 links and mean distance = -4552806 Pair f1-f10 has 1 links and mean distance = -4987631 Pair f6-f10 has 1 links and mean distance = -3352723 Pair r12-f168 has 1 links and mean distance = -2898999 Pair f43-f262 has 1 links and mean distance = -336993 Pair r117-f175 has 1 links and mean distance = -59066 Pair f8-f22 has 1 links and mean distance = -2076777 Pair f6-f41 has 1 links and mean distance = -4068265 Pair r4-f14 has 1 links and mean distance = -4703171 Pair f56-f6 has 1 links and mean distance = -2984977 Pair r37-f14 has 1 links and mean distance = -688395 Pair f199-f66 has 1 links and mean distance = -329057 Pair f738-r2 has 1 links and mean distance = -3368322 Pair f12-f143 has 1 links and mean distance = -1625148 Pair f4-r22 has 1 links and mean distance = -4095103 Pair f5-f12 has 1 links and mean distance = -5184965 Pair f29-f56 has 1 links and mean distance = -222291 Pair f19-f82 has 1 links and mean distance = -1253529 Pair r48-f49 has 1 links and mean distance = -535355 Pair f13-f20 has 1 links and mean distance = -2074914 Pair f70-f102 has 1 links and mean distance = -240837 Pair f60-r9 has 1 links and mean distance = -3093687 Pair r10-f47 has 1 links and mean distance = -2007422 Pair f5-f100 has 1 links and mean distance = -3200115 Pair r9-f220 has 1 links and mean distance = -1721947 Pair f8-r20 has 1 links and mean distance = -3350993 Pair r3-f150 has 1 links and mean distance = -2781042 Pair f88-f5 has 1 links and mean distance = -2997691 Pair f26-f19 has 1 links and mean distance = -1484310 Pair f4-f20 has 1 links and mean distance = -4747117 Pair f35-f47 has 1 links and mean distance = -651619 Pair f16-f22 has 1 links and mean distance = -2295954 Pair f50-f20 has 1 links and mean distance = -579670 Pair r22-f51 has 1 links and mean distance = -1189125 Pair f7-r1 has 1 links and mean distance = -3248194 Pair f46-f19 has 1 links and mean distance = -816349 Pair r136-f15 has 1 links and mean distance = -206152 Pair f14-r76 has 1 links and mean distance = -2006994 Pair f6-f1 has 1 links and mean distance = -5015419 Pair f1-f28 has 1 links and mean distance = -4576864 Pair r8-f2 has 1 links and mean distance = -1556193 Pair f47-r108 has 1 links and mean distance = -106504 Pair f76-r90 has 1 links and mean distance = -429126 Pair r30-f146 has 1 links and mean distance = -156302 Pair r5-f56 has 1 links and mean distance = -3081002 Pair f6-f24 has 1 links and mean distance = -1048508 Pair f47-r19 has 1 links and mean distance = -808155 Pair f25-r8 has 1 links and mean distance = -2081299 Pair f92-r55 has 1 links and mean distance = -141503 Pair f62-f9 has 1 links and mean distance = -1731280 Pair r6-f9 has 1 links and mean distance = -5512523 Pair f29-f1 has 1 links and mean distance = -2634183 Pair f88-f26 has 1 links and mean distance = -243483 Pair r21-f15 has 1 links and mean distance = -1472158 Pair f128-f801 has 1 links and mean distance = -74870 Pair r7-f64 has 1 links and mean distance = -2863282 Pair f9-r11 has 1 links and mean distance = -2420031 Pair r235-f9 has 1 links and mean distance = -1232142 Pair f1-f29 has 1 links and mean distance = -3255164 Pair f160-r2 has 1 links and mean distance = -1571313 Pair f188-f240 has 1 links and mean distance = -41792 Pair f89-f770 has 1 links and mean distance = -180126 Pair f5-f40 has 1 links and mean distance = -2446835 Pair f12-r4 has 1 links and mean distance = -3706123 Pair f4-r14 has 1 links and mean distance = -3104756 Pair f76-r5 has 1 links and mean distance = -2111539 Pair f1-f40 has 1 links and mean distance = -3157383 Pair f33-r16 has 1 links and mean distance = -1142833 Pair r550-f5 has 1 links and mean distance = -3119026 Pair f18-f51 has 1 links and mean distance = -847191 Pair r106-f90 has 1 links and mean distance = -226137 Pair f116-f92 has 1 links and mean distance = -187723 Pair f7-f35 has 1 links and mean distance = -1874894 Pair f2-r243 has 1 links and mean distance = -3591544 Pair r172-f73 has 1 links and mean distance = -88612 Pair r66-f4 has 1 links and mean distance = -1122493 Pair f16-f9 has 1 links and mean distance = -2627839 Pair r9-f1 has 1 links and mean distance = -4537311 Pair f20-f30 has 1 links and mean distance = -1407472 Pair f26-r15 has 1 links and mean distance = -1598640 Pair f13-f33 has 1 links and mean distance = -1221729 Pair f3-f65 has 1 links and mean distance = -3662425 Pair f13-f71 has 1 links and mean distance = -890853 Pair r104-f52 has 1 links and mean distance = -478543 Pair r5-f3 has 1 links and mean distance = -2815192 Pair f88-f10 has 1 links and mean distance = -710703 Pair f89-f64 has 1 links and mean distance = -287687 Pair f39-f1 has 1 links and mean distance = -4035546 Pair f36-f1 has 1 links and mean distance = -1632661 Pair f11-f6 has 1 links and mean distance = -1747344 Pair f111-r198 has 1 links and mean distance = -129265 Pair r19-f24 has 1 links and mean distance = -1167222 Pair f24-r8 has 1 links and mean distance = -1981609 Pair f38-f23 has 1 links and mean distance = -844522 Pair f1-r9 has 1 links and mean distance = -5049978 Pair f44-f4 has 1 links and mean distance = -2238372 Pair f4-f21 has 1 links and mean distance = -3471734 Pair r4-f52 has 1 links and mean distance = -1950731 Pair f2-f29 has 1 links and mean distance = -1688992 Pair r27-f9 has 1 links and mean distance = -545691 Pair f147-f1 has 1 links and mean distance = -4311683 Pair r199-f8 has 1 links and mean distance = -515440 Pair r20-f3 has 1 links and mean distance = -3062641 Pair r14-f12 has 1 links and mean distance = -1963928 Pair f8-f10 has 1 links and mean distance = -3132611 Pair f52-r108 has 1 links and mean distance = -475895 Pair f2-f6 has 1 links and mean distance = -4571908 Pair f83-f23 has 1 links and mean distance = -1299865 Pair f6-f2 has 1 links and mean distance = -1262574 Pair f4-f72 has 1 links and mean distance = -3096526 Pair f5-f20 has 1 links and mean distance = -4069054 Pair f39-f20 has 1 links and mean distance = -746505 Pair f90-r63 has 1 links and mean distance = -236536 Pair r311-f8 has 1 links and mean distance = -2809451 Pair f1-f83 has 1 links and mean distance = -3419501 Pair f43-f93 has 1 links and mean distance = -511599 Pair f146-f278 has 1 links and mean distance = -90172 Pair r21-f7 has 1 links and mean distance = -1248815 Pair f9-r24 has 1 links and mean distance = -133657 Pair f83-r9 has 1 links and mean distance = -1226651 Pair f19-r101 has 1 links and mean distance = -1246607 Pair r15-f12 has 1 links and mean distance = -505426 Pair f8-r43 has 1 links and mean distance = -1280804 Pair f106-f11 has 1 links and mean distance = -293700 Pair f14-f114 has 1 links and mean distance = -1779518 Pair f12-f48 has 1 links and mean distance = -3285728 Pair f45-f22 has 1 links and mean distance = -1313446 Pair r25-f13 has 1 links and mean distance = -1636842 Pair f13-r19 has 1 links and mean distance = -729826 Pair f25-r110 has 1 links and mean distance = -1505719 Pair f225-r10 has 1 links and mean distance = -355936 Pair f19-f32 has 1 links and mean distance = -2197587 Pair f93-f16 has 1 links and mean distance = -210866 Pair f28-f4 has 1 links and mean distance = -3796103 Pair r39-f26 has 1 links and mean distance = -344329 Pair f40-f10 has 1 links and mean distance = -2619061 Pair r9-f15 has 1 links and mean distance = -1079415 Pair f4-r15 has 1 links and mean distance = -1283116 Pair f17-f138 has 1 links and mean distance = -826424 Pair f299-f205 has 1 links and mean distance = -3801 Pair r13-f5 has 1 links and mean distance = -3574675 Pair f7-r41 has 1 links and mean distance = -1857003 Pair r11-f47 has 1 links and mean distance = -1067073 Pair f24-r12 has 1 links and mean distance = -4437556 Pair f20-f237 has 1 links and mean distance = -21347 Pair r232-f72 has 1 links and mean distance = -99679 Pair f6-f7 has 1 links and mean distance = -3275255 Pair f4-f11 has 1 links and mean distance = -3498013 Pair f16-f8 has 1 links and mean distance = -2559407 Pair f146-r11 has 1 links and mean distance = -1693496 Pair f12-f246 has 1 links and mean distance = -1138887 Pair f25-f69 has 1 links and mean distance = -610980 Pair f15-f73 has 1 links and mean distance = -1367673 Pair f110-f22 has 1 links and mean distance = -98503 Pair f116-f2 has 1 links and mean distance = -590410 Pair r21-f48 has 1 links and mean distance = -320735 Pair f17-r2 has 1 links and mean distance = -3374549 Pair f7-r3 has 1 links and mean distance = -2864331 Pair f25-f9 has 1 links and mean distance = -2904828 Pair f9-f13 has 1 links and mean distance = -2471109 Pair f51-f33 has 1 links and mean distance = -865413 Pair r12-f2 has 1 links and mean distance = -4444308 Pair f30-f48 has 1 links and mean distance = -1537994 Pair f1-r738 has 1 links and mean distance = -3892186 Pair f116-f95 has 1 links and mean distance = -112665 Pair f13-r46 has 1 links and mean distance = -2245741 Pair f5-f33 has 1 links and mean distance = -3829240 Pair f434-r183 has 1 links and mean distance = -33617 Pair f24-f2 has 1 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