Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -1168778 <- tig#384, A=5070776 nt (start:3883145, end:3883166) B=1359 nt (start:1147, end:1126) CALCULATED DISTANCE APART: -1168778 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#39 -> -425841 <- tig#r.68, A=736718 nt (start:310443, end:310464) B=189499 nt (start:169933, end:169954) CALCULATED DISTANCE APART: -425841 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#10 -> -2964290 <- tig#103, B=3047199 nt (start:261801, end:261822) A=211876 nt (start:198892, end:198871) CALCULATED DISTANCE APART: -2964290 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:458949, end:458928) A=1345436 nt (start:26711, end:26690) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig. Pair (TATATACATATTTTAATTAAT - ATTAAAACTTTCACTTACCAA) on contig 34 (1705564 nt) Astart:679539 Aend:679518 Bstart:664576 Bend:664597 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#2 -> -607451 <- tig#56, A=5014909 nt (start:4622863, end:4622884) B=262460 nt (start:235405, end:235384) CALCULATED DISTANCE APART: -607451 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#106 -> -1441975 <- tig#29, B=117163 nt (start:27376, end:27397) A=1463708 nt (start:1372188, end:1372167) CALCULATED DISTANCE APART: -1441975 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12086, end:12065) A=91302 nt (start:12107, end:12086) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#33 -> -492044 <- tig#32, A=1290487 nt (start:1235937, end:1235958) B=972151 nt (start:457494, end:457473) CALCULATED DISTANCE APART: -492044 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282727, end:282748) B=2196 nt (start:908, end:887) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#283 -> -3818458 <- tig#2, A=1768 nt (start:618, end:639) B=5014909 nt (start:3837308, end:3837287) CALCULATED DISTANCE APART: -3818458 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -1168778 <- tig#384, A=5070776 nt (start:3882340, end:3882361) B=1359 nt (start:342, end:321) CALCULATED DISTANCE APART: -1168778 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082607, end:2082628) B=976128 nt (start:960915, end:960936) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082572, end:2082593) B=976128 nt (start:960950, end:960971) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136158, end:136179) B=15068 nt (start:1518, end:1539) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#118 -> -33564 <- tig#97, B=66247 nt (start:38057, end:38078) A=91050 nt (start:25374, end:25353) CALCULATED DISTANCE APART: -33564 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282692, end:282713) B=2196 nt (start:873, end:852) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#127 -> -57440 <- tig#17, B=80830 nt (start:63120, end:63141) A=1959065 nt (start:59730, end:59709) CALCULATED DISTANCE APART: -57440 < -2000 Pairs unsatisfied in distance within a contig. Pair (ACTTTGGATAAGCTTTCTAGT - TCCATCTCATTCACACTGATG) on contig 2 (5014909 nt) Astart:1268906 Aend:1268927 Bstart:1283568 Bend:1283547 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#65 -> -1239086 <- tig#33, A=286124 nt (start:256570, end:256591) B=1290487 nt (start:1229532, end:1229511) CALCULATED DISTANCE APART: -1239086 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGAACAACGGAAGCAATACCC - TATCAATTGGTGGAGTTTCAT) on contig 14 (2271162 nt) Astart:2001158 Aend:2001137 Bstart:1734391 Bend:1734412 CALCULATED DISTANCE APART: 266767 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#305 -> -2202335 <- tig#r.19, A=1638 nt (start:257, end:278) B=3531543 nt (start:1310589, end:1310610) CALCULATED DISTANCE APART: -2202335 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GGAAATAGTAGTTATATGGTA - AACATTTCTCATAAGCTTTTT) on contig 15 (3712591 nt) Astart:1719428 Aend:1719449 Bstart:1728590 Bend:1728611 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -40662 <- tig#443, A=736718 nt (start:677061, end:677082) B=1213 nt (start:1005, end:984) CALCULATED DISTANCE APART: -40662 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.35 -> -676591 <- tig#2, B=1135475 nt (start:599410, end:599389) A=5014909 nt (start:97181, end:97160) CALCULATED DISTANCE APART: -676591 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.15 -> -3863647 <- tig#1, B=3712591 nt (start:1966222, end:1966201) A=4853111 nt (start:1917425, end:1917404) CALCULATED DISTANCE APART: -3863647 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AAACGCACACTTTTTTTACAA - CGAAATCCCTAAATGTATCAC) on contig 7 (3534247 nt) Astart:2256062 Aend:2256041 Bstart:2238720 Bend:2238699 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.155 -> -199872 <- tig#62, B=18420 nt (start:15961, end:15940) A=354710 nt (start:203911, end:203890) CALCULATED DISTANCE APART: -199872 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460519, end:460498) A=1345436 nt (start:25141, end:25120) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCAAATATTCATAACTCTCCA - CACTAAGAATAAGTCGGTAAA) on contig 13 (2650694 nt) Astart:2309405 Aend:2309426 Bstart:2336074 Bend:2336053 CALCULATED DISTANCE APART: 26669 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#25 -> -368777 <- tig#2, B=1290536 nt (start:975280, end:975301) A=5014909 nt (start:73521, end:73500) CALCULATED DISTANCE APART: -368777 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTTCTTTGTTATCAAAAGGAA - TATTTCCTCATTTCTCCTATA) on contig 5 (3689108 nt) Astart:1169567 Aend:1169588 Bstart:1184702 Bend:1184681 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185879, end:4185858) A=3712591 nt (start:682, end:661) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -1335675 <- tig#4, B=3747885 nt (start:2858647, end:2858668) A=3837743 nt (start:466437, end:466416) CALCULATED DISTANCE APART: -1335675 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#101 -> -2656718 <- tig#12, A=84691 nt (start:11200, end:11221) B=2766197 nt (start:2603227, end:2603206) CALCULATED DISTANCE APART: -2656718 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136208, end:136229) B=15068 nt (start:1468, end:1489) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.48 -> -112349 <- tig#51, B=487359 nt (start:37215, end:37194) A=875428 nt (start:95134, end:95113) CALCULATED DISTANCE APART: -112349 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728028, end:728049) A=1096 nt (start:113, end:92) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTATAAAAATAGAAAACCTAA - GCGGGGGAAGTCCAAGCCAGA) on contig 109 (66564 nt) Astart:5719 Aend:5698 Bstart:83 Bend:104 CALCULATED DISTANCE APART: 5636 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.65 -> -310325 <- tig#80, B=286124 nt (start:206815, end:206794) A=191116 nt (start:123510, end:123489) CALCULATED DISTANCE APART: -310325 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -1811179 <- tig#42, A=5070776 nt (start:3882015, end:3882036) B=659641 nt (start:642418, end:642397) CALCULATED DISTANCE APART: -1811179 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#7 -> -9350947 <- tig#6, A=3534247 nt (start:649685, end:649706) B=6870868 nt (start:6486385, end:6486364) CALCULATED DISTANCE APART: -9350947 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGCTGCTCCATGGCTCCATCT - TACTTATTCAGAGAGATTAAG) on contig 1 (4853111 nt) Astart:346100 Aend:346121 Bstart:391377 Bend:391356 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.74 -> -469455 <- tig#33, B=238371 nt (start:142384, end:142363) A=1290487 nt (start:347071, end:347050) CALCULATED DISTANCE APART: -469455 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GAAGAAGAGAATTGAAAAAAA - CTGCAAACCAAGGCACACATA) on contig 15 (3712591 nt) Astart:1791870 Aend:1791849 Bstart:2055942 Bend:2055963 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2675, end:2696) A=258385 nt (start:1211, end:1190) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135398, end:135419) B=15068 nt (start:2278, end:2299) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.1 -> -4590180 <- tig#16, B=4853111 nt (start:3208412, end:3208391) A=2098954 nt (start:1401768, end:1401747) CALCULATED DISTANCE APART: -4590180 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#12 -> -559942 <- tig#93, A=2766197 nt (start:2330654, end:2330675) B=152036 nt (start:144399, end:144378) CALCULATED DISTANCE APART: -559942 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10198, end:10177) A=2766197 nt (start:2151365, end:2151344) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185574, end:4185553) A=3712591 nt (start:987, end:966) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#38 -> -3178666 <- tig#7, A=1143067 nt (start:493382, end:493403) B=3534247 nt (start:2548981, end:2548960) CALCULATED DISTANCE APART: -3178666 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459879, end:459858) A=1345436 nt (start:25781, end:25760) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2200, end:2221) A=258385 nt (start:736, end:715) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig. Pair (CGTAAATCAGTGGCTTTTCAC - CACTATCACCAACCACTACTA) on contig 1 (4853111 nt) Astart:346040 Aend:346061 Bstart:391317 Bend:391296 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.257 -> -2902765 <- tig#8, B=1995 nt (start:1461, end:1440) A=5070776 nt (start:2921304, end:2921283) CALCULATED DISTANCE APART: -2902765 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -1335675 <- tig#4, B=3747885 nt (start:2858762, end:2858783) A=3837743 nt (start:466552, end:466531) CALCULATED DISTANCE APART: -1335675 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#33 -> -492044 <- tig#32, A=1290487 nt (start:1235592, end:1235613) B=972151 nt (start:457149, end:457128) CALCULATED DISTANCE APART: -492044 < -2000 Pairs unsatisfied in distance within a contig. Pair (GTAACTGGAGACCAGCTCCTC - TCATGCGATCTGGGTACTCTT) on contig 4 (3837743 nt) Astart:1822724 Aend:1822703 Bstart:1799649 Bend:1799670 CALCULATED DISTANCE APART: 23075 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082447, end:2082468) B=976128 nt (start:961075, end:961096) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#6 -> -287005 <- tig#95, B=6870868 nt (start:6656270, end:6656291) A=92653 nt (start:92407, end:92386) CALCULATED DISTANCE APART: -287005 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260517, end:2260538) B=356404 nt (start:342707, end:342728) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ACACTCCCGGCCAGGTAATGA - CTTCGCTCATGTATGTTTTGT) on contig 6 (6870868 nt) Astart:2439988 Aend:2440009 Bstart:2446705 Bend:2446726 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#48 -> -156052 <- tig#51, B=487359 nt (start:406411, end:406432) A=875428 nt (start:95104, end:95083) CALCULATED DISTANCE APART: -156052 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.257 -> -2902765 <- tig#8, B=1995 nt (start:1071, end:1050) A=5070776 nt (start:2921694, end:2921673) CALCULATED DISTANCE APART: -2902765 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -621133 <- tig#r.66, A=2766197 nt (start:2129768, end:2129789) B=201913 nt (start:197209, end:197230) CALCULATED DISTANCE APART: -621133 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#48 -> -3151847 <- tig#12, B=487359 nt (start:40506, end:40527) A=2766197 nt (start:2724994, end:2724973) CALCULATED DISTANCE APART: -3151847 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTGTTCAAATTCTTATACTCG - AAGTTCACTCTGAAGAGAATT) on contig 4 (3837743 nt) Astart:2358446 Aend:2358467 Bstart:2359616 Bend:2359637 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#47 -> -4008935 <- tig#9, B=471458 nt (start:177166, end:177187) A=3747885 nt (start:3734643, end:3734622) CALCULATED DISTANCE APART: -4008935 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135708, end:135729) B=15068 nt (start:1968, end:1989) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#167 -> -31403 <- tig#r.131, A=25236 nt (start:10192, end:10213) B=36503 nt (start:144, end:165) CALCULATED DISTANCE APART: -31403 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#167 -> -5058 <- tig#r.132, A=25236 nt (start:10192, end:10213) B=34686 nt (start:24672, end:24693) CALCULATED DISTANCE APART: -5058 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#52 -> -355614 <- tig#3, B=356404 nt (start:22, end:43) A=3889482 nt (start:19232, end:19211) CALCULATED DISTANCE APART: -355614 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGTGACCAAAGCTGTTTTCAT - CGACCTATCGTAGTATTTTAT) on contig 5 (3689108 nt) Astart:1169307 Aend:1169328 Bstart:1184442 Bend:1184421 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10688, end:10667) A=2766197 nt (start:2150875, end:2150854) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.74 -> -1813138 <- tig#17, B=238371 nt (start:59098, end:59077) A=1959065 nt (start:1774040, end:1774019) CALCULATED DISTANCE APART: -1813138 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AACCGTAACGAAGATGTTCTT - CCCTCAACACCCACCCCCCTA) on contig 49 (399963 nt) Astart:43354 Aend:43333 Bstart:44133 Bend:44154 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.257 -> -2902765 <- tig#8, B=1995 nt (start:1471, end:1450) A=5070776 nt (start:2921294, end:2921273) CALCULATED DISTANCE APART: -2902765 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATTGTTTTTGGAATAGAGATT - TTCGGTCTAGACTATTCTTTT) on contig 15 (3712591 nt) Astart:1717828 Aend:1717849 Bstart:1730190 Bend:1730211 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#265 -> -3126344 <- tig#4, A=1946 nt (start:1626, end:1647) B=3837743 nt (start:3146024, end:3146003) CALCULATED DISTANCE APART: -3126344 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGCTATATTACCTTGCTTCGT - TCCGCAAATATATACATCAAT) on contig 15 (3712591 nt) Astart:1718848 Aend:1718869 Bstart:1729170 Bend:1729191 Pairs unsatisfied in pairing logic within a contig. Pair (TTAAACGTTATAAAATTTAAA - AAACTTTGTACATTAAATTTC) on contig 19 (3531543 nt) Astart:3060426 Aend:3060405 Bstart:3048297 Bend:3048276 Pairs unsatisfied in distance within a contig. Pair (GCTCCTGATGCTCAAAAGACT - ATACCTACGTTTTATGGTTTA) on contig 5 (3689108 nt) Astart:1178457 Aend:1178436 Bstart:1163323 Bend:1163344 CALCULATED DISTANCE APART: 15134 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -40662 <- tig#443, A=736718 nt (start:676486, end:676507) B=1213 nt (start:430, end:409) CALCULATED DISTANCE APART: -40662 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#6 -> -3712398 <- tig#1, A=6870868 nt (start:5007552, end:5007573) B=4853111 nt (start:1869082, end:1869061) CALCULATED DISTANCE APART: -3712398 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#25 -> -357909 <- tig#r.156, A=1290536 nt (start:913253, end:913274) B=17231 nt (start:16605, end:16626) CALCULATED DISTANCE APART: -357909 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2600, end:2621) A=258385 nt (start:1136, end:1115) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#127 -> -57440 <- tig#17, B=80830 nt (start:62985, end:63006) A=1959065 nt (start:59595, end:59574) CALCULATED DISTANCE APART: -57440 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATTTTTCCTGATTTTATGAGC - GTGAGTTTTCCTGCAAGAATA) on contig 15 (3712591 nt) Astart:1718148 Aend:1718169 Bstart:1729870 Bend:1729891 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12361, end:12340) A=91302 nt (start:11832, end:11811) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#184 -> -16712 <- tig#65, B=9859 nt (start:355, end:376) A=286124 nt (start:27208, end:27187) CALCULATED DISTANCE APART: -16712 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGTAATGAAACTTGCAATTGA - GGAAGCTCGTAGGAACCATCC) on contig 122 (43035 nt) Astart:14088 Aend:14109 Bstart:17017 Bend:16996 CALCULATED DISTANCE APART: 2929 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#74 -> -258350 <- tig#56, B=238371 nt (start:58986, end:59007) A=262460 nt (start:98965, end:98944) CALCULATED DISTANCE APART: -258350 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -1335763 <- tig#4, B=3747885 nt (start:2857532, end:2857553) A=3837743 nt (start:465410, end:465389) CALCULATED DISTANCE APART: -1335763 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGCTGTCTCTGCTCTTAACTA - AGCTTTTGAAATAGCCATGAT) on contig 15 (3712591 nt) Astart:1717988 Aend:1718009 Bstart:1730030 Bend:1730051 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#1 -> -4220727 <- tig#r.10, A=4853111 nt (start:1841064, end:1841085) B=3047199 nt (start:1818519, end:1818540) CALCULATED DISTANCE APART: -4220727 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135478, end:135499) B=15068 nt (start:2198, end:2219) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#3 -> -3661467 <- tig#r.56, A=3889482 nt (start:401872, end:401893) B=262460 nt (start:68603, end:68624) CALCULATED DISTANCE APART: -3661467 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTGAATGCGATAATGATGAAG - ACACAAACATGACATTAACAC) on contig 1 (4853111 nt) Astart:346420 Aend:346441 Bstart:391697 Bend:391676 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig. Pair (ATATGTATCAAAATAGTATAC - TAGACAAGTGTTCCATAATGA) on contig 13 (2650694 nt) Astart:2350852 Aend:2350831 Bstart:2327504 Bend:2327525 CALCULATED DISTANCE APART: 23348 Pairs unsatisfied in distance within a contig. Pair (CAAACTATTTAGCAAGCATGG - GGAGCAGCTAGTTTAACACCG) on contig 6 (6870868 nt) Astart:1138374 Aend:1138353 Bstart:1129947 Bend:1129968 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#51 -> -486164 <- tig#r.46, A=875428 nt (start:750855, end:750876) B=577887 nt (start:196296, end:196317) CALCULATED DISTANCE APART: -486164 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -621133 <- tig#r.66, A=2766197 nt (start:2129408, end:2129429) B=201913 nt (start:197569, end:197590) CALCULATED DISTANCE APART: -621133 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#33 -> -492044 <- tig#32, A=1290487 nt (start:1235982, end:1236003) B=972151 nt (start:457539, end:457518) CALCULATED DISTANCE APART: -492044 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.53 -> -1953148 <- tig#16, B=354284 nt (start:292442, end:292421) A=2098954 nt (start:1680706, end:1680685) CALCULATED DISTANCE APART: -1953148 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#74 -> -258382 <- tig#56, B=238371 nt (start:58944, end:58965) A=262460 nt (start:98955, end:98934) CALCULATED DISTANCE APART: -258382 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#74 -> -258350 <- tig#56, B=238371 nt (start:58976, end:58997) A=262460 nt (start:98955, end:98934) CALCULATED DISTANCE APART: -258350 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10128, end:10107) A=2766197 nt (start:2151435, end:2151414) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATGGAACCAGGACAGTCCAAG - TGGCATGGTGTTGAGTACTTT) on contig 48 (487359 nt) Astart:38427 Aend:38448 Bstart:385547 Bend:385568 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#74 -> -258227 <- tig#56, B=238371 nt (start:59071, end:59092) A=262460 nt (start:98927, end:98906) CALCULATED DISTANCE APART: -258227 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -7514397 <- tig#2, B=4628067 nt (start:4149982, end:4149961) A=5014909 nt (start:3384415, end:3384394) CALCULATED DISTANCE APART: -7514397 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TGTAATTCTCAGGAGTCTAAG - TAAATATCGATGTTAACAAAT) on contig 15 (3712591 nt) Astart:1719023 Aend:1719044 Bstart:1728995 Bend:1729016 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#283 -> -3818458 <- tig#2, A=1768 nt (start:218, end:239) B=5014909 nt (start:3836908, end:3836887) CALCULATED DISTANCE APART: -3818458 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ACTTCCTTGAAGGAGACGCCC - TATAGAAGATCCAATTCCAGA) on contig 48 (487359 nt) Astart:37837 Aend:37858 Bstart:386137 Bend:386158 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#26 -> -90650 <- tig#95, B=1332708 nt (start:1310613, end:1310634) A=92653 nt (start:88555, end:88534) CALCULATED DISTANCE APART: -90650 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#19 -> -3098757 <- tig#47, A=3531543 nt (start:470011, end:470032) B=471458 nt (start:57225, end:57204) CALCULATED DISTANCE APART: -3098757 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TCACATTCTCAAGAGTTTCTT - GTTTTTCTTTTCGTTTCCACT) on contig 15 (3712591 nt) Astart:1716543 Aend:1716564 Bstart:1731475 Bend:1731496 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#41 -> -651287 <- tig#17, B=667251 nt (start:486718, end:486739) A=1959065 nt (start:490754, end:490733) CALCULATED DISTANCE APART: -651287 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GAACCTATTGACTTGCAAACA - AAGGATGAGAGGAAGTAGACG) on contig 15 (3712591 nt) Astart:1716753 Aend:1716774 Bstart:1731265 Bend:1731286 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33904, end:33883) A=855454 nt (start:18545, end:18524) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig. Pair (TATAAGAAGCTGAAGACATAT - ATTATCATTTCATTTTTTTTA) on contig 5 (3689108 nt) Astart:1169412 Aend:1169433 Bstart:1184547 Bend:1184526 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in pairing logic within a contig. Pair (ACGGTACTAATGAAGACAAAA - TGCACAGCCTTACCAATATAT) on contig 14 (2271162 nt) Astart:658446 Aend:658425 Bstart:495465 Bend:495444 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#46 -> -523088 <- tig#r.48, A=577887 nt (start:136131, end:136152) B=487359 nt (start:386027, end:386048) CALCULATED DISTANCE APART: -523088 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#58 -> -329129 <- tig#94, A=374416 nt (start:44249, end:44270) B=93323 nt (start:18962, end:18941) CALCULATED DISTANCE APART: -329129 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.58 -> -1866109 <- tig#19, B=374416 nt (start:14231, end:14210) A=3531543 nt (start:1871878, end:1871857) CALCULATED DISTANCE APART: -1866109 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#39 -> -357382 <- tig#r.48, A=736718 nt (start:457876, end:457897) B=487359 nt (start:388819, end:388840) CALCULATED DISTANCE APART: -357382 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGATGTGAAAAATAAAATATG - AAGGGCTTCCACTTCAGCTTG) on contig 19 (3531543 nt) Astart:3059541 Aend:3059520 Bstart:3049182 Bend:3049161 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219476, end:4219455) A=2598 nt (start:2145, end:2124) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CTGTAAATTTCTTGGCAATTG - AATTCTGTGACAACTCTATAG) on contig 4 (3837743 nt) Astart:2357936 Aend:2357957 Bstart:2360126 Bend:2360147 Pairs unsatisfied in distance within a contig. Pair (TTGTCCTGAAGGTGAAACAGA - TCAAAACTGTTGAAATCCCGA) on contig 41 (667251 nt) Astart:88328 Aend:88307 Bstart:75648 Bend:75669 CALCULATED DISTANCE APART: 12680 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#118 -> -33564 <- tig#97, B=66247 nt (start:38187, end:38208) A=91050 nt (start:25504, end:25483) CALCULATED DISTANCE APART: -33564 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -322558 <- tig#r.572, A=2650694 nt (start:2308630, end:2308651) B=1031 nt (start:537, end:558) CALCULATED DISTANCE APART: -322558 < -2000 Pairs unsatisfied in distance within a contig. Pair (CAGAGAAATGCATCTCAATTT - CGTGCATTGATTAAAAAAAAC) on contig 30 (1050452 nt) Astart:649479 Aend:649500 Bstart:665245 Bend:665224 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#265 -> -3126344 <- tig#4, A=1946 nt (start:1621, end:1642) B=3837743 nt (start:3146019, end:3145998) CALCULATED DISTANCE APART: -3126344 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TGTGATTTATTGTTTCACTCT - AGCTATATGATCACAAAAAAA) on contig 19 (3531543 nt) Astart:3058548 Aend:3058527 Bstart:3050172 Bend:3050151 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10278, end:10257) A=2766197 nt (start:2151285, end:2151264) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTTGCTTCACTTTCACTACGT - ATGATCTTGAAAGTAAGCTCA) on contig 10 (3047199 nt) Astart:790114 Aend:790093 Bstart:766376 Bend:766397 CALCULATED DISTANCE APART: 23738 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#33 -> -492044 <- tig#32, A=1290487 nt (start:1235537, end:1235558) B=972151 nt (start:457094, end:457073) CALCULATED DISTANCE APART: -492044 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.257 -> -2902765 <- tig#8, B=1995 nt (start:1711, end:1690) A=5070776 nt (start:2921054, end:2921033) CALCULATED DISTANCE APART: -2902765 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#9 -> -3369808 <- tig#22, A=3747885 nt (start:358103, end:358124) B=1636463 nt (start:26, end:5) CALCULATED DISTANCE APART: -3369808 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTGAATTTTAGGTATCCGATT - CTCTATTATTAGTTTGGGTCG) on contig 15 (3712591 nt) Astart:1717238 Aend:1717259 Bstart:1730780 Bend:1730801 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#33 -> -492044 <- tig#32, A=1290487 nt (start:1235942, end:1235963) B=972151 nt (start:457499, end:457478) CALCULATED DISTANCE APART: -492044 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730602, end:730623) B=3531543 nt (start:3200176, end:3200155) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -1168778 <- tig#384, A=5070776 nt (start:3882360, end:3882381) B=1359 nt (start:362, end:341) CALCULATED DISTANCE APART: -1168778 < -2000 Pairs unsatisfied in distance within a contig. Pair (GTTTATTTGGTGTTAGATGCG - AAGACATAGCTGAAACCTAGT) on contig 2 (5014909 nt) Astart:1268756 Aend:1268777 Bstart:1283418 Bend:1283397 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#120 -> -1341554 <- tig#29, B=44710 nt (start:42997, end:43018) A=1463708 nt (start:1359841, end:1359820) CALCULATED DISTANCE APART: -1341554 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136268, end:136289) B=15068 nt (start:1408, end:1429) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TCATCATAAACTCATCCAGAT - AACTTATTGAGACAAACTTTG) on contig 4 (3837743 nt) Astart:2358401 Aend:2358422 Bstart:2359661 Bend:2359682 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282672, end:282693) B=2196 nt (start:853, end:832) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#46 -> -448835 <- tig#r.73, A=577887 nt (start:112438, end:112459) B=171056 nt (start:167670, end:167691) CALCULATED DISTANCE APART: -448835 < -2000 Pairs unsatisfied in distance within a contig. Pair (TATCCATCCAAACCACTATAA - CTCTCTCCTTTGGTTTTCTCA) on contig 34 (1705564 nt) Astart:679379 Aend:679358 Bstart:664416 Bend:664437 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136663, end:136684) B=15068 nt (start:1013, end:1034) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.22 -> -757174 <- tig#37, B=1636463 nt (start:338763, end:338742) A=853709 nt (start:438411, end:438390) CALCULATED DISTANCE APART: -757174 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#36 -> -741896 <- tig#37, A=855454 nt (start:790675, end:790696) B=853709 nt (start:697117, end:697096) CALCULATED DISTANCE APART: -741896 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#43 -> -460206 <- tig#53, B=1235946 nt (start:924321, end:924342) A=354284 nt (start:168581, end:168560) CALCULATED DISTANCE APART: -460206 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -214292 <- tig#6, A=354284 nt (start:134440, end:134461) B=6870868 nt (start:14448, end:14427) CALCULATED DISTANCE APART: -214292 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730672, end:730693) B=3531543 nt (start:3200246, end:3200225) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#57 -> -3231864 <- tig#7, A=258385 nt (start:255974, end:255995) B=3534247 nt (start:3249453, end:3249432) CALCULATED DISTANCE APART: -3231864 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#135 -> -196097 <- tig#r.6, A=39094 nt (start:37601, end:37622) B=6870868 nt (start:6656264, end:6656285) CALCULATED DISTANCE APART: -196097 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:458649, end:458628) A=1345436 nt (start:27011, end:26990) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AACCATTGACTTTTGTGTTAG - GTACGTAGATCTACGTTGTTC) on contig 19 (3531543 nt) Astart:3058808 Aend:3058787 Bstart:3049912 Bend:3049891 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#19 -> -2734537 <- tig#r.2, A=3531543 nt (start:1923343, end:1923364) B=5014909 nt (start:3868572, end:3868593) CALCULATED DISTANCE APART: -2734537 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGAATTTGAGCATATTTTTCG - GAACACCTTCACTGCATTGAT) on contig 2 (5014909 nt) Astart:1268481 Aend:1268502 Bstart:1283143 Bend:1283122 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig. Pair (GAGACAGCTTGCAGAATTTGG - TCAGAGATCCTCTTAGTGATG) on contig 2 (5014909 nt) Astart:1269706 Aend:1269727 Bstart:1284368 Bend:1284347 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -1168778 <- tig#384, A=5070776 nt (start:3882260, end:3882281) B=1359 nt (start:262, end:241) CALCULATED DISTANCE APART: -1168778 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -1168778 <- tig#384, A=5070776 nt (start:3882820, end:3882841) B=1359 nt (start:822, end:801) CALCULATED DISTANCE APART: -1168778 < -2000 Pairs unsatisfied in distance within a contig. Pair (ACAATAGAAGAATTCCATTTT - TTTTGATTTACTCTGGTTACC) on contig 118 (66247 nt) Astart:3208 Aend:3229 Bstart:6635 Bend:6614 CALCULATED DISTANCE APART: 3427 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#112 -> -34094 <- tig#210, B=54810 nt (start:2271, end:2292) A=5560 nt (start:1555, end:1534) CALCULATED DISTANCE APART: -34094 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728068, end:728089) A=1096 nt (start:153, end:132) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#118 -> -33564 <- tig#97, B=66247 nt (start:38032, end:38053) A=91050 nt (start:25349, end:25328) CALCULATED DISTANCE APART: -33564 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGGTGGAACAAATTTCGAGAC - ATTAGACTTAGACCAAATAAG) on contig 14 (2271162 nt) Astart:658491 Aend:658470 Bstart:495420 Bend:495399 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#67 -> -23669 <- tig#134, B=197815 nt (start:180430, end:180451) A=33262 nt (start:26284, end:26263) CALCULATED DISTANCE APART: -23669 < -2000 Pairs unsatisfied in distance within a contig. Pair (TAAGCTTGGAAAAGAAGCTCA - ATGCAATAAAGAGATGATAAT) on contig 1 (4853111 nt) Astart:346925 Aend:346946 Bstart:392202 Bend:392181 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in pairing logic within a contig. Pair (CAGAGAGCCGGGCAGAATCAA - ATGGGAGAGCAGAACAAAGTG) on contig 9 (3747885 nt) Astart:2849154 Aend:2849175 Bstart:2856687 Bend:2856708 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#103 -> -259849 <- tig#r.48, A=211876 nt (start:14699, end:14720) B=487359 nt (start:404687, end:404708) CALCULATED DISTANCE APART: -259849 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.38 -> -1426764 <- tig#29, B=1143067 nt (start:1039689, end:1039668) A=1463708 nt (start:407075, end:407054) CALCULATED DISTANCE APART: -1426764 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#15 -> -8116131 <- tig#6, B=3712591 nt (start:342989, end:343010) A=6870868 nt (start:4766529, end:4766508) CALCULATED DISTANCE APART: -8116131 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTCTCTCTACAATTTCTGAAA - TAATATAGGATAATATATCAT) on contig 71 (271268 nt) Astart:123870 Aend:123849 Bstart:118496 Bend:118517 CALCULATED DISTANCE APART: 5374 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460244, end:460223) A=1345436 nt (start:25416, end:25395) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#86 -> -735496 <- tig#17, B=280231 nt (start:15129, end:15150) A=1959065 nt (start:490394, end:490373) CALCULATED DISTANCE APART: -735496 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GTTTCATCTCTACAACTTGCA - ACTTGGACTCTATCATATAAC) on contig 19 (3531543 nt) Astart:3060321 Aend:3060300 Bstart:3048402 Bend:3048381 Pairs unsatisfied in pairing logic within a contig. Pair (ATTTTATTTTATTTTACGCGG - CAATCTCTCTAGCTTAATGCA) on contig 7 (3534247 nt) Astart:2256222 Aend:2256201 Bstart:2238555 Bend:2238534 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.39 -> -441493 <- tig#441, B=736718 nt (start:461416, end:461395) A=1218 nt (start:77, end:56) CALCULATED DISTANCE APART: -441493 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#38 -> -1000456 <- tig#78, B=1143067 nt (start:253072, end:253093) A=184063 nt (start:130461, end:130440) CALCULATED DISTANCE APART: -1000456 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082362, end:2082383) B=976128 nt (start:961160, end:961181) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAGTCATGGAAATGGGGAACG - CCAACTATGCGAGTCTTCCAA) on contig 5 (3689108 nt) Astart:1169647 Aend:1169668 Bstart:1184782 Bend:1184761 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3583 <- tig#26, B=1171658 nt (start:1171373, end:1171394) A=1332708 nt (start:23298, end:23277) CALCULATED DISTANCE APART: -3583 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#7 -> -2854901 <- tig#r.68, A=3534247 nt (start:667132, end:667153) B=189499 nt (start:181713, end:181734) CALCULATED DISTANCE APART: -2854901 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:134553, end:134574) B=15068 nt (start:3123, end:3144) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -1168778 <- tig#384, A=5070776 nt (start:3883255, end:3883276) B=1359 nt (start:1257, end:1236) CALCULATED DISTANCE APART: -1168778 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCAATCTTCTTGAAACATCAA - TAATCTAGATCAATACATGTT) on contig 5 (3689108 nt) Astart:1178367 Aend:1178346 Bstart:1163233 Bend:1163254 CALCULATED DISTANCE APART: 15134 Pairs unsatisfied in pairing logic within a contig. Pair (ATTTTTGTTTTGACTTGCATA - ATTGTTGTAACATGTGAGAAA) on contig 15 (3712591 nt) Astart:1718128 Aend:1718149 Bstart:1729890 Bend:1729911 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.1 -> -3038957 <- tig#32, B=4853111 nt (start:2505388, end:2505367) A=972151 nt (start:553569, end:553548) CALCULATED DISTANCE APART: -3038957 < -2000 Pairs unsatisfied in distance within a contig. Pair (CGCTTAGAACCTTTTTCAGTT - CCAAGATTCCATATCTAGGTA) on contig 15 (3712591 nt) Astart:3352372 Aend:3352393 Bstart:3377358 Bend:3377337 CALCULATED DISTANCE APART: 24986 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#168 -> -31428 <- tig#54, A=13020 nt (start:8895, end:8916) B=625914 nt (start:47303, end:47282) CALCULATED DISTANCE APART: -31428 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGGATCTTGAGCAGGCAGTTC - CAAATGGTGATATGGAATATT) on contig 31 (976128 nt) Astart:41199 Aend:41220 Bstart:68749 Bend:68728 CALCULATED DISTANCE APART: 27550 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2990, end:3011) A=258385 nt (start:1526, end:1505) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#48 -> -3151848 <- tig#12, B=487359 nt (start:41275, end:41296) A=2766197 nt (start:2725764, end:2725743) CALCULATED DISTANCE APART: -3151848 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.31 -> -71281 <- tig#98, B=976128 nt (start:17200, end:17179) A=88184 nt (start:74081, end:74060) CALCULATED DISTANCE APART: -71281 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:281932, end:281953) B=2196 nt (start:113, end:92) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#48 -> -4830716 <- tig#r.11, A=487359 nt (start:17221, end:17242) B=4628067 nt (start:247489, end:247510) CALCULATED DISTANCE APART: -4830716 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459139, end:459118) A=1345436 nt (start:26521, end:26500) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -1335675 <- tig#4, B=3747885 nt (start:2858657, end:2858678) A=3837743 nt (start:466447, end:466426) CALCULATED DISTANCE APART: -1335675 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTGGCAGGGCTAAGCTTGGAA - GAGATGATAATGGAGACATAT) on contig 1 (4853111 nt) Astart:346915 Aend:346936 Bstart:392192 Bend:392171 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig. Pair (TTAAAGATACACATCTGTTCG - CAGAGAGAGTATTTTTCTCTC) on contig 34 (1705564 nt) Astart:679784 Aend:679763 Bstart:664821 Bend:664842 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#37 -> -4025641 <- tig#r.2, A=853709 nt (start:537547, end:537568) B=5014909 nt (start:1285430, end:1285451) CALCULATED DISTANCE APART: -4025641 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2570, end:2591) A=258385 nt (start:1106, end:1085) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#8 -> -4395819 <- tig#r.32, A=5070776 nt (start:1616978, end:1616999) B=972151 nt (start:10130, end:10151) CALCULATED DISTANCE APART: -4395819 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATATAGTTAAATACATACTCC - CGAAAAACTTGTAGTAGCCAA) on contig 19 (3531543 nt) Astart:3058388 Aend:3058367 Bstart:3050332 Bend:3050311 Pairs unsatisfied in distance within a contig. Pair (TAGTTTCCTCACTTGCATCCG - GAAATGCCCAAATGATATTTT) on contig 27 (1227811 nt) Astart:434505 Aend:434526 Bstart:450758 Bend:450737 CALCULATED DISTANCE APART: 16253 Pairs unsatisfied in distance within a contig. Pair (CTCTTCTTCTTCTTGTTTGTC - TTCATATTAATAGGTATGATT) on contig 5 (3689108 nt) Astart:1170047 Aend:1170068 Bstart:1185182 Bend:1185161 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in pairing logic within a contig. Pair (TTGATTCATGACTCTTTCATT - TTCTTCATCACCTTTTCACAT) on contig 14 (2271162 nt) Astart:1848921 Aend:1848900 Bstart:2003829 Bend:2003808 Pairs unsatisfied in distance within a contig. Pair (ATATGAAGATACTGTAGCGAA - AGCAACTTTGTGGCGATCAAT) on contig 2 (5014909 nt) Astart:1269671 Aend:1269692 Bstart:1284333 Bend:1284312 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282357, end:282378) B=2196 nt (start:538, end:517) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATATAATCATAAAAATCTTTG - AGTCGCTCGAAAATATACAGA) on contig 19 (3531543 nt) Astart:3060251 Aend:3060230 Bstart:3048472 Bend:3048451 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3583 <- tig#26, B=1171658 nt (start:1171128, end:1171149) A=1332708 nt (start:23053, end:23032) CALCULATED DISTANCE APART: -3583 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.31 -> -57770 <- tig#75, B=976128 nt (start:57912, end:57891) A=373953 nt (start:19858, end:19837) CALCULATED DISTANCE APART: -57770 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -1335758 <- tig#4, B=3747885 nt (start:2856852, end:2856873) A=3837743 nt (start:464725, end:464704) CALCULATED DISTANCE APART: -1335758 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.257 -> -2902765 <- tig#8, B=1995 nt (start:1581, end:1560) A=5070776 nt (start:2921184, end:2921163) CALCULATED DISTANCE APART: -2902765 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TAAAATTTGCCAATTAAGCTA - CAAACATACCAAAGAATCCAT) on contig 19 (3531543 nt) Astart:3059861 Aend:3059840 Bstart:3048862 Bend:3048841 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082667, end:2082688) B=976128 nt (start:960855, end:960876) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCTCTCACTGTCCCTAATCTC - TGAATGTTTGGACGTAAGTGT) on contig 14 (2271162 nt) Astart:2001288 Aend:2001267 Bstart:1734521 Bend:1734542 CALCULATED DISTANCE APART: 266767 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#2 -> -6085454 <- tig#25, A=5014909 nt (start:11425, end:11446) B=1290536 nt (start:1101970, end:1101949) CALCULATED DISTANCE APART: -6085454 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#86 -> -1157724 <- tig#r.5, A=280231 nt (start:170145, end:170166) B=3689108 nt (start:2621470, end:2621491) CALCULATED DISTANCE APART: -1157724 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTCTGACTCTTTTGGTAACGA - GCCAAAAGAAATGTTTGATTT) on contig 19 (3531543 nt) Astart:3060146 Aend:3060125 Bstart:3048577 Bend:3048556 Pairs unsatisfied in pairing logic within a contig. Pair (CGAGAAGTCAAGAAACACATT - AATACTGGCTCCGTATTTTCC) on contig 19 (3531543 nt) Astart:3059431 Aend:3059410 Bstart:3049292 Bend:3049271 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728098, end:728119) A=1096 nt (start:183, end:162) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.409 -> -1019852 <- tig#23, B=1303 nt (start:716, end:695) A=1345436 nt (start:1039136, end:1039115) CALCULATED DISTANCE APART: -1019852 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -4201 <- tig#r.96, A=262460 nt (start:244486, end:244507) B=91302 nt (start:85075, end:85096) CALCULATED DISTANCE APART: -4201 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#13 -> -3071382 <- tig#16, B=2650694 nt (start:286562, end:286583) A=2098954 nt (start:727250, end:727229) CALCULATED DISTANCE APART: -3071382 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#7 -> -577830 <- tig#30, B=3534247 nt (start:3524242, end:3524263) A=1050452 nt (start:587825, end:587804) CALCULATED DISTANCE APART: -577830 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#118 -> -33564 <- tig#97, B=66247 nt (start:37877, end:37898) A=91050 nt (start:25194, end:25173) CALCULATED DISTANCE APART: -33564 < -2000 Pairs unsatisfied in distance within a contig. Pair (GTTAAAAGTCGAAAGATTTCA - GAGCCTTGAATCATCAAAATG) on contig 30 (1050452 nt) Astart:648594 Aend:648615 Bstart:673628 Bend:673607 CALCULATED DISTANCE APART: 25034 Pairs unsatisfied in pairing logic within a contig. Pair (CGTGCACTTCAAGCAACCAGA - GGAGGCACACAGTTGCACCTG) on contig 15 (3712591 nt) Astart:1718363 Aend:1718384 Bstart:1729655 Bend:1729676 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728928, end:728949) A=1096 nt (start:1013, end:992) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig. Pair (GATGACACCCCTAACATCTTT - ATGGGAAATTGGGAATGAAAG) on contig 15 (3712591 nt) Astart:3352307 Aend:3352328 Bstart:3377293 Bend:3377272 CALCULATED DISTANCE APART: 24986 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -214292 <- tig#6, A=354284 nt (start:133710, end:133731) B=6870868 nt (start:13718, end:13697) CALCULATED DISTANCE APART: -214292 < -2000 Pairs unsatisfied in distance within a contig. Pair (GATGAGCGGTAAGCACTACTA - GATGTATACCTAAACTCTGCA) on contig 2 (5014909 nt) Astart:1269741 Aend:1269762 Bstart:1284403 Bend:1284382 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135963, end:135984) B=15068 nt (start:1713, end:1734) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17265, end:17244) A=1227811 nt (start:6550, end:6529) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#33 -> -492044 <- tig#32, A=1290487 nt (start:1235992, end:1236013) B=972151 nt (start:457549, end:457528) CALCULATED DISTANCE APART: -492044 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#9 -> -2729019 <- tig#69, A=3747885 nt (start:1133990, end:1134011) B=186132 nt (start:135124, end:135103) CALCULATED DISTANCE APART: -2729019 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTGTACAACTGCTTGATGCGA - TATAATTCCCTTTCTCTTTGG) on contig 1 (4853111 nt) Astart:346330 Aend:346351 Bstart:391607 Bend:391586 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#283 -> -3818458 <- tig#2, A=1768 nt (start:528, end:549) B=5014909 nt (start:3837218, end:3837197) CALCULATED DISTANCE APART: -3818458 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4186109, end:4186088) A=3712591 nt (start:452, end:431) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#124 -> -244034 <- tig#86, A=41985 nt (start:997, end:1018) B=280231 nt (start:223046, end:223025) CALCULATED DISTANCE APART: -244034 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.46 -> -213326 <- tig#51, B=577887 nt (start:159833, end:159812) A=875428 nt (start:73493, end:73472) CALCULATED DISTANCE APART: -213326 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#47 -> -4008935 <- tig#9, B=471458 nt (start:177156, end:177177) A=3747885 nt (start:3734633, end:3734612) CALCULATED DISTANCE APART: -4008935 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16705, end:16684) A=1227811 nt (start:7110, end:7089) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#26 -> -90650 <- tig#95, B=1332708 nt (start:1310513, end:1310534) A=92653 nt (start:88455, end:88434) CALCULATED DISTANCE APART: -90650 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259222, end:2259243) B=356404 nt (start:344002, end:344023) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260677, end:2260698) B=356404 nt (start:342547, end:342568) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185814, end:4185793) A=3712591 nt (start:747, end:726) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -1168778 <- tig#384, A=5070776 nt (start:3882365, end:3882386) B=1359 nt (start:367, end:346) CALCULATED DISTANCE APART: -1168778 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#283 -> -3818458 <- tig#2, A=1768 nt (start:583, end:604) B=5014909 nt (start:3837273, end:3837252) CALCULATED DISTANCE APART: -3818458 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#217 -> -1125292 <- tig#25, A=5246 nt (start:3786, end:3807) B=1290536 nt (start:1143832, end:1143811) CALCULATED DISTANCE APART: -1125292 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#12 -> -1055671 <- tig#16, B=2766197 nt (start:2417976, end:2417997) A=2098954 nt (start:727450, end:727429) CALCULATED DISTANCE APART: -1055671 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4186054, end:4186033) A=3712591 nt (start:507, end:486) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#13 -> -3265533 <- tig#5, B=2650694 nt (start:2066834, end:2066855) A=3689108 nt (start:2701673, end:2701652) CALCULATED DISTANCE APART: -3265533 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16135, end:16114) A=1227811 nt (start:7680, end:7659) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.1 -> -4590186 <- tig#16, B=4853111 nt (start:3207652, end:3207631) A=2098954 nt (start:1402534, end:1402513) CALCULATED DISTANCE APART: -4590186 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#4 -> -3798685 <- tig#16, B=3837743 nt (start:350900, end:350921) A=2098954 nt (start:331842, end:331821) CALCULATED DISTANCE APART: -3798685 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -1168778 <- tig#384, A=5070776 nt (start:3882350, end:3882371) B=1359 nt (start:352, end:331) CALCULATED DISTANCE APART: -1168778 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.32 -> -889372 <- tig#17, B=972151 nt (start:418908, end:418887) A=1959065 nt (start:490464, end:490443) CALCULATED DISTANCE APART: -889372 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#19 -> -1649636 <- tig#31, A=3531543 nt (start:1879032, end:1879053) B=976128 nt (start:17125, end:17104) CALCULATED DISTANCE APART: -1649636 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17460, end:17439) A=1227811 nt (start:6355, end:6334) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#143 -> -20260 <- tig#r.34, A=24293 nt (start:5569, end:5590) B=1705564 nt (start:1684028, end:1684049) CALCULATED DISTANCE APART: -20260 < -2000 Pairs unsatisfied in distance within a contig. Pair (GTCCTTGAACTTAGCAGCAAA - GTATGGTTTATCCCCACCAGT) on contig 15 (3712591 nt) Astart:3352457 Aend:3352478 Bstart:3377443 Bend:3377422 CALCULATED DISTANCE APART: 24986 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:134898, end:134919) B=15068 nt (start:2778, end:2799) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460979, end:460958) A=1345436 nt (start:24681, end:24660) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12121, end:12100) A=91302 nt (start:12072, end:12051) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig. Pair (GTCTCAGGCAAAGATGGTGTA - TCCATTGGCCACACATGAAAC) on contig 30 (1050452 nt) Astart:649944 Aend:649965 Bstart:665710 Bend:665689 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.74 -> -305832 <- tig#53, B=238371 nt (start:30, end:9) A=354284 nt (start:325802, end:325781) CALCULATED DISTANCE APART: -305832 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TAGATATCAGCTAGCACTATA - ATAAGCAAGGCACAATTATAA) on contig 19 (3531543 nt) Astart:3060461 Aend:3060440 Bstart:3048262 Bend:3048241 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#120 -> -1341554 <- tig#29, B=44710 nt (start:43352, end:43373) A=1463708 nt (start:1360196, end:1360175) CALCULATED DISTANCE APART: -1341554 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10678, end:10657) A=2766197 nt (start:2150885, end:2150864) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTAGAGCGATCGAGTTTGTCC - TCTGCTAGCAGGCAAATGAGA) on contig 19 (3531543 nt) Astart:3058088 Aend:3058067 Bstart:3050632 Bend:3050611 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.54 -> -242536 <- tig#53, B=625914 nt (start:94355, end:94334) A=354284 nt (start:168181, end:168160) CALCULATED DISTANCE APART: -242536 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.6 -> -1021234 <- tig#25, B=6870868 nt (start:12523, end:12502) A=1290536 nt (start:1028711, end:1028690) CALCULATED DISTANCE APART: -1021234 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGCAAGCATGGATTCACTGTT - CAAAGCAACTGGAGCAGCTAG) on contig 6 (6870868 nt) Astart:1138364 Aend:1138343 Bstart:1129937 Bend:1129958 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig. Pair (AGAACATATAACTCCATGATG - ATCAATCAATATCTTGGTTCC) on contig 1 (4853111 nt) Astart:346680 Aend:346701 Bstart:391957 Bend:391936 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig. Pair (TAGCTGATGTTGAGAATCCTG - CTATTAGAACAACTAACTAAA) on contig 37 (853709 nt) Astart:538247 Aend:538268 Bstart:550915 Bend:550894 CALCULATED DISTANCE APART: 12668 Pairs unsatisfied in distance within a contig. Pair (GTATGGTGAAACTGTAAGATA - TTTCAAAGTATTTCTCACATA) on contig 5 (3689108 nt) Astart:1169807 Aend:1169828 Bstart:1184942 Bend:1184921 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135803, end:135824) B=15068 nt (start:1873, end:1894) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TGTTAGGTTTTATCTGAATTT - TGCAATATCGTTCTCGTACGT) on contig 19 (3531543 nt) Astart:3058793 Aend:3058772 Bstart:3049927 Bend:3049906 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -322558 <- tig#r.572, A=2650694 nt (start:2308890, end:2308911) B=1031 nt (start:277, end:298) CALCULATED DISTANCE APART: -322558 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GCCACCGGCCTCTTTCCGGCC - ACATGTTCTTAACTTCCACAC) on contig 19 (3531543 nt) Astart:3060171 Aend:3060150 Bstart:3048552 Bend:3048531 Pairs unsatisfied in distance within a contig. Pair (AACTCAAATCCGATATCGCGG - AGTCGAAGTCTTTTTGATTAA) on contig 5 (3689108 nt) Astart:1178522 Aend:1178501 Bstart:1163388 Bend:1163409 CALCULATED DISTANCE APART: 15134 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2680, end:2701) A=258385 nt (start:1216, end:1195) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTCTTTTTGATGAGTCATCAT - GCTCACATGTTGAAATGTATT) on contig 37 (853709 nt) Astart:537772 Aend:537793 Bstart:550442 Bend:550421 CALCULATED DISTANCE APART: 12670 Pairs unsatisfied in pairing logic within a contig. Pair (TTTTGAAGTAAACTGTTGACT - GCTCGGATATTCAAATTTATA) on contig 19 (3531543 nt) Astart:3059341 Aend:3059320 Bstart:3049382 Bend:3049361 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#12 -> -167604 <- tig#557, B=2766197 nt (start:2579494, end:2579515) A=1050 nt (start:901, end:880) CALCULATED DISTANCE APART: -167604 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#19 -> -3197163 <- tig#47, A=3531543 nt (start:469536, end:469557) B=471458 nt (start:155156, end:155135) CALCULATED DISTANCE APART: -3197163 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#48 -> -585449 <- tig#46, A=487359 nt (start:41953, end:41974) B=577887 nt (start:160043, end:160022) CALCULATED DISTANCE APART: -585449 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCTTCTAACAAGGATACACTA - TAAGTAGTGTATCCTTGTTAG) on contig 53 (354284 nt) Astart:325804 Aend:325783 Bstart:325779 Bend:325800 CALCULATED DISTANCE APART: 25 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282197, end:282218) B=2196 nt (start:378, end:357) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#2 -> -4867530 <- tig#r.7, A=5014909 nt (start:136099, end:136120) B=3534247 nt (start:3525527, end:3525548) CALCULATED DISTANCE APART: -4867530 < -2000 Pairs unsatisfied in distance within a contig. Pair (GACGTAGCAGGATGCCTTGGA - GTCTTAATTGGCATATTGATT) on contig 5 (3689108 nt) Astart:1170212 Aend:1170233 Bstart:1185347 Bend:1185326 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259302, end:2259323) B=356404 nt (start:343922, end:343943) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -1335675 <- tig#4, B=3747885 nt (start:2858742, end:2858763) A=3837743 nt (start:466532, end:466511) CALCULATED DISTANCE APART: -1335675 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.127 -> -101554 <- tig#35, B=80830 nt (start:58606, end:58585) A=1135475 nt (start:62948, end:62927) CALCULATED DISTANCE APART: -101554 < -2000 Pairs unsatisfied in distance within a contig. Pair (ACTAAAATGTGGGCTGTAAGT - TCCATTATCATCCAATCTCTG) on contig 41 (667251 nt) Astart:88578 Aend:88557 Bstart:75898 Bend:75919 CALCULATED DISTANCE APART: 12680 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#10 -> -2964298 <- tig#103, B=3047199 nt (start:260738, end:260759) A=211876 nt (start:197837, end:197816) CALCULATED DISTANCE APART: -2964298 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#86 -> -1157724 <- tig#r.5, A=280231 nt (start:170140, end:170161) B=3689108 nt (start:2621475, end:2621496) CALCULATED DISTANCE APART: -1157724 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282257, end:282278) B=2196 nt (start:438, end:417) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#34 -> -1107781 <- tig#79, A=1705564 nt (start:662216, end:662237) B=136600 nt (start:84433, end:84412) CALCULATED DISTANCE APART: -1107781 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730377, end:730398) B=3531543 nt (start:3199951, end:3199930) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CTTGCACACACAAACCCAAAC - CAACAAAAATCATCGACTTGG) on contig 19 (3531543 nt) Astart:3060306 Aend:3060285 Bstart:3048417 Bend:3048396 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135488, end:135509) B=15068 nt (start:2188, end:2209) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TCGATGTAACACATACTATTG - ACACTAAAGTGAGAAGAAACC) on contig 4 (3837743 nt) Astart:2357966 Aend:2357987 Bstart:2360096 Bend:2360117 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -1168778 <- tig#384, A=5070776 nt (start:3883250, end:3883271) B=1359 nt (start:1252, end:1231) CALCULATED DISTANCE APART: -1168778 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -8563 <- tig#129, A=354284 nt (start:325774, end:325795) B=39603 nt (start:53, end:32) CALCULATED DISTANCE APART: -8563 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GGCGAACTCTCTCGCCGATGT - CTCTTTGACAAAAGGTCTTCT) on contig 16 (2098954 nt) Astart:726870 Aend:726849 Bstart:1188167 Bend:1188188 Pairs unsatisfied in pairing logic within a contig. Pair (TCAAGCCCAAATGGAGATGAA - GAGAGTGAAGATCCAACAATT) on contig 19 (3531543 nt) Astart:3058723 Aend:3058702 Bstart:3049997 Bend:3049976 Pairs unsatisfied in distance within a contig. Pair (GTAGAGAGAGTCTGCAAAGTG - TACCCTCACGAACCAAGAAAT) on contig 1 (4853111 nt) Astart:346485 Aend:346506 Bstart:391762 Bend:391741 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in pairing logic within a contig. Pair (AGAGGATGGTAACTGGTGAAA - TGACACCAGACCAAGGTGGAA) on contig 4 (3837743 nt) Astart:2357896 Aend:2357917 Bstart:2360166 Bend:2360187 Pairs unsatisfied in pairing logic within a contig. Pair (AAGAAGTCCATAAATGAGGAA - TTCGAAAAGTACAACTTATTA) on contig 48 (487359 nt) Astart:37437 Aend:37458 Bstart:386537 Bend:386558 Pairs unsatisfied in distance within a contig. Pair (TATGATGACTTACACTGTTCT - ACGGCATGTTGGCTTCTCTGC) on contig 1 (4853111 nt) Astart:346985 Aend:347006 Bstart:392262 Bend:392241 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16935, end:16914) A=1227811 nt (start:6880, end:6859) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#19 -> -1649636 <- tig#31, A=3531543 nt (start:1878222, end:1878243) B=976128 nt (start:16315, end:16294) CALCULATED DISTANCE APART: -1649636 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259562, end:2259583) B=356404 nt (start:343662, end:343683) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCTTGATTCTTCAGGTTCTCA - ATCAAATAAAATATATACCAT) on contig 2 (5014909 nt) Astart:1269121 Aend:1269142 Bstart:1283783 Bend:1283762 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#48 -> -585449 <- tig#46, A=487359 nt (start:41973, end:41994) B=577887 nt (start:160063, end:160042) CALCULATED DISTANCE APART: -585449 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TCCCATCTTATTATTGACTAT - TATACCAAAATTCTATCCGTA) on contig 15 (3712591 nt) Astart:1718998 Aend:1719019 Bstart:1729020 Bend:1729041 Pairs unsatisfied in pairing logic within a contig. Pair (TTGGTGGTATACAAACTTCAC - TCGGGATGGCTTAGAGCAAAG) on contig 19 (3531543 nt) Astart:3059701 Aend:3059680 Bstart:3049022 Bend:3049001 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#32 -> -635088 <- tig#7, B=972151 nt (start:533400, end:533421) A=3534247 nt (start:216337, end:216316) CALCULATED DISTANCE APART: -635088 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#433 -> -944078 <- tig#r.29, A=1238 nt (start:726, end:747) B=1463708 nt (start:500142, end:500163) CALCULATED DISTANCE APART: -944078 < -2000 Pairs unsatisfied in distance within a contig. Pair (GGCTACTCTTGAATGTTCTAG - CCTTCTTCTTTCGGGTTTAAA) on contig 5 (3689108 nt) Astart:1170132 Aend:1170153 Bstart:1185267 Bend:1185246 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.48 -> -3108448 <- tig#12, B=487359 nt (start:404004, end:403983) A=2766197 nt (start:2724444, end:2724423) CALCULATED DISTANCE APART: -3108448 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -1335675 <- tig#4, B=3747885 nt (start:2858652, end:2858673) A=3837743 nt (start:466442, end:466421) CALCULATED DISTANCE APART: -1335675 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#9 -> -6067963 <- tig#12, A=3747885 nt (start:357938, end:357959) B=2766197 nt (start:2698016, end:2697995) CALCULATED DISTANCE APART: -6067963 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459294, end:459273) A=1345436 nt (start:26366, end:26345) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#112 -> -29466 <- tig#r.129, A=54810 nt (start:44918, end:44939) B=39603 nt (start:29, end:50) CALCULATED DISTANCE APART: -29466 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2055, end:2076) A=258385 nt (start:591, end:570) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:134753, end:134774) B=15068 nt (start:2923, end:2944) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#5 -> -4104553 <- tig#32, B=3689108 nt (start:360198, end:360219) A=972151 nt (start:795643, end:795622) CALCULATED DISTANCE APART: -4104553 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAAGGTAGAATAAGTACAACC - ACTAAAAGCATAATATTAGAC) on contig 13 (2650694 nt) Astart:1947315 Aend:1947336 Bstart:1962963 Bend:1962942 CALCULATED DISTANCE APART: 15648 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:281957, end:281978) B=2196 nt (start:138, end:117) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728528, end:728549) A=1096 nt (start:613, end:592) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.12 -> -2332571 <- tig#98, B=2766197 nt (start:2330777, end:2330756) A=88184 nt (start:21794, end:21773) CALCULATED DISTANCE APART: -2332571 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260467, end:2260488) B=356404 nt (start:342757, end:342778) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#9 -> -2729019 <- tig#69, A=3747885 nt (start:1134145, end:1134166) B=186132 nt (start:135279, end:135258) CALCULATED DISTANCE APART: -2729019 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282272, end:282293) B=2196 nt (start:453, end:432) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.257 -> -2902765 <- tig#8, B=1995 nt (start:1916, end:1895) A=5070776 nt (start:2920849, end:2920828) CALCULATED DISTANCE APART: -2902765 < -2000 Pairs unsatisfied in distance within a contig. Pair (CATCCTTAGAAACCTATTCAC - CCCAATCTTGAAGCATCACAC) on contig 123 (42452 nt) Astart:14671 Aend:14650 Bstart:1539 Bend:1560 CALCULATED DISTANCE APART: 13132 Pairs unsatisfied in distance within a contig. Pair (GTCAATCTTGTACTCGTCCTT - ACCAGTAAAGTAGTCTACACA) on contig 15 (3712591 nt) Astart:3352442 Aend:3352463 Bstart:3377428 Bend:3377407 CALCULATED DISTANCE APART: 24986 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.58 -> -1866109 <- tig#19, B=374416 nt (start:14131, end:14110) A=3531543 nt (start:1871978, end:1871957) CALCULATED DISTANCE APART: -1866109 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#8 -> -4732278 <- tig#4, B=5070776 nt (start:760748, end:760769) A=3837743 nt (start:442250, end:442229) CALCULATED DISTANCE APART: -4732278 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#25 -> -666259 <- tig#2, B=1290536 nt (start:852757, end:852778) A=5014909 nt (start:248480, end:248459) CALCULATED DISTANCE APART: -666259 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10723, end:10702) A=2766197 nt (start:2150840, end:2150819) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#92 -> -2122014 <- tig#16, B=101136 nt (start:2777, end:2798) A=2098954 nt (start:2043655, end:2043634) CALCULATED DISTANCE APART: -2122014 < -2000 Pairs unsatisfied in distance within a contig. Pair (CACTGTCCCTAATCTCATCTG - GACTTTGAATGTTTGGACGTA) on contig 14 (2271162 nt) Astart:2001283 Aend:2001262 Bstart:1734516 Bend:1734537 CALCULATED DISTANCE APART: 266767 Pairs unsatisfied in distance within a contig. Pair (TAGCACCTCTTTATATAGTCA - CTCAGACCATTGTTGAATTCA) on contig 43 (1235946 nt) Astart:243901 Aend:243880 Bstart:226491 Bend:226512 CALCULATED DISTANCE APART: 17410 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.115 -> -3755846 <- tig#9, B=66709 nt (start:40958, end:40937) A=3747885 nt (start:3734888, end:3734867) CALCULATED DISTANCE APART: -3755846 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTTGTGGTAGAGAAAGTGAAT - TTTTTCTCTGAATAACACGGA) on contig 19 (3531543 nt) Astart:3059033 Aend:3059012 Bstart:3049687 Bend:3049666 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#84 -> -306083 <- tig#53, A=197079 nt (start:196800, end:196821) B=354284 nt (start:325804, end:325783) CALCULATED DISTANCE APART: -306083 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#84 -> -16644 <- tig#r.131, A=197079 nt (start:196800, end:196821) B=36503 nt (start:138, end:159) CALCULATED DISTANCE APART: -16644 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.17 -> -1813077 <- tig#74, B=1959065 nt (start:1774039, end:1774018) A=238371 nt (start:59038, end:59017) CALCULATED DISTANCE APART: -1813077 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#283 -> -3818458 <- tig#2, A=1768 nt (start:453, end:474) B=5014909 nt (start:3837143, end:3837122) CALCULATED DISTANCE APART: -3818458 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#7 -> -6956566 <- tig#r.11, A=3534247 nt (start:1081944, end:1081965) B=4628067 nt (start:103804, end:103825) CALCULATED DISTANCE APART: -6956566 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.403 -> -2330792 <- tig#13, B=1321 nt (start:440, end:419) A=2650694 nt (start:2350352, end:2350331) CALCULATED DISTANCE APART: -2330792 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -633077 <- tig#46, B=4628067 nt (start:147199, end:147178) A=577887 nt (start:505878, end:505857) CALCULATED DISTANCE APART: -633077 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260102, end:2260123) B=356404 nt (start:343122, end:343143) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#48 -> -156052 <- tig#51, B=487359 nt (start:406466, end:406487) A=875428 nt (start:95159, end:95138) CALCULATED DISTANCE APART: -156052 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2165, end:2186) A=258385 nt (start:701, end:680) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282752, end:282773) B=2196 nt (start:933, end:912) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#129 -> -29532 <- tig#114, A=39603 nt (start:3668, end:3689) B=54818 nt (start:13597, end:13576) CALCULATED DISTANCE APART: -29532 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#14 -> -765455 <- tig#43, B=2271162 nt (start:2082939, end:2082960) A=1235946 nt (start:597232, end:597211) CALCULATED DISTANCE APART: -765455 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.58 -> -1866109 <- tig#19, B=374416 nt (start:14341, end:14320) A=3531543 nt (start:1871768, end:1871747) CALCULATED DISTANCE APART: -1866109 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:283067, end:283088) B=2196 nt (start:1248, end:1227) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#47 -> -466598 <- tig#91, A=471458 nt (start:465, end:486) B=101959 nt (start:15605, end:15584) CALCULATED DISTANCE APART: -466598 < -2000 Pairs unsatisfied in distance within a contig. Pair (CCAAAATCGGGATGCTGATCT - GTTGAAGACTAATCTTACTTT) on contig 15 (3712591 nt) Astart:3352267 Aend:3352288 Bstart:3377253 Bend:3377232 CALCULATED DISTANCE APART: 24986 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#37 -> -3951537 <- tig#8, A=853709 nt (start:537707, end:537728) B=5070776 nt (start:3655535, end:3655514) CALCULATED DISTANCE APART: -3951537 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460679, end:460658) A=1345436 nt (start:24981, end:24960) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#37 -> -1821163 <- tig#25, A=853709 nt (start:114366, end:114387) B=1290536 nt (start:1101820, end:1101799) CALCULATED DISTANCE APART: -1821163 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#118 -> -33564 <- tig#97, B=66247 nt (start:38202, end:38223) A=91050 nt (start:25519, end:25498) CALCULATED DISTANCE APART: -33564 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#305 -> -2202335 <- tig#r.19, A=1638 nt (start:117, end:138) B=3531543 nt (start:1310729, end:1310750) CALCULATED DISTANCE APART: -2202335 < -2000 Pairs unsatisfied in distance within a contig. Pair (GAAGAAAACCCTTTAAAAACT - AGAAGATGAGAAACAAGCAAA) on contig 75 (373953 nt) Astart:275715 Aend:275736 Bstart:300433 Bend:300412 CALCULATED DISTANCE APART: 24718 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728598, end:728619) A=1096 nt (start:683, end:662) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10073, end:10052) A=2766197 nt (start:2151490, end:2151469) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.143 -> -33440 <- tig#126, B=24293 nt (start:14702, end:14681) A=40796 nt (start:38738, end:38717) CALCULATED DISTANCE APART: -33440 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12486, end:12465) A=91302 nt (start:11707, end:11686) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig. Pair (ACAGAGAACTCTGTAAATATG - GGAAAGAACTAGCGTCTTTGA) on contig 6 (6870868 nt) Astart:1138114 Aend:1138093 Bstart:1129687 Bend:1129708 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.48 -> -3108447 <- tig#12, B=487359 nt (start:404708, end:404687) A=2766197 nt (start:2723739, end:2723718) CALCULATED DISTANCE APART: -3108447 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#115 -> -364511 <- tig#53, A=66709 nt (start:8002, end:8023) B=354284 nt (start:325804, end:325783) CALCULATED DISTANCE APART: -364511 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3583 <- tig#26, B=1171658 nt (start:1171528, end:1171549) A=1332708 nt (start:23453, end:23432) CALCULATED DISTANCE APART: -3583 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#48 -> -156052 <- tig#51, B=487359 nt (start:406401, end:406422) A=875428 nt (start:95094, end:95073) CALCULATED DISTANCE APART: -156052 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGGCGCGTGCACTTCAAGCAA - CACACAGTTGCACCTGTAGCA) on contig 15 (3712591 nt) Astart:1718358 Aend:1718379 Bstart:1729660 Bend:1729681 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#131 -> -42644 <- tig#r.34, A=36503 nt (start:140, end:161) B=1705564 nt (start:1679283, end:1679304) CALCULATED DISTANCE APART: -42644 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#131 -> -17361 <- tig#r.261, A=36503 nt (start:140, end:161) B=1974 nt (start:976, end:997) CALCULATED DISTANCE APART: -17361 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2261062, end:2261083) B=356404 nt (start:342162, end:342183) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.6 -> -304848 <- tig#54, B=6870868 nt (start:12273, end:12252) A=625914 nt (start:312575, end:312554) CALCULATED DISTANCE APART: -304848 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGGCCCTTGGATTTATCGATA - TCATTTGTATTTTATCATTTT) on contig 15 (3712591 nt) Astart:1717653 Aend:1717674 Bstart:1730365 Bend:1730386 Pairs unsatisfied in pairing logic within a contig. Pair (CTTGTATGGATAAATATATAT - TTTATGCAGTTTTTTTTTACA) on contig 19 (3531543 nt) Astart:3059188 Aend:3059167 Bstart:3049532 Bend:3049511 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#57 -> -4506482 <- tig#r.11, A=258385 nt (start:256011, end:256032) B=4628067 nt (start:103959, end:103980) CALCULATED DISTANCE APART: -4506482 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#31 -> -1173470 <- tig#41, A=976128 nt (start:41014, end:41035) B=667251 nt (start:258356, end:258335) CALCULATED DISTANCE APART: -1173470 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10323, end:10302) A=2766197 nt (start:2151240, end:2151219) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig. Pair (TACTGAAACTATCTTAGATGA - ATTTTGACAGTTACGTTTTTT) on contig 51 (875428 nt) Astart:52786 Aend:52807 Bstart:65828 Bend:65807 CALCULATED DISTANCE APART: 13042 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#12 -> -245456 <- tig#56, B=2766197 nt (start:2696541, end:2696562) A=262460 nt (start:195800, end:195779) CALCULATED DISTANCE APART: -245456 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282322, end:282343) B=2196 nt (start:503, end:482) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#13 -> -5010387 <- tig#6, A=2650694 nt (start:2508018, end:2508039) B=6870868 nt (start:4887711, end:4887690) CALCULATED DISTANCE APART: -5010387 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGTGCTCTGCTCTTATGCATT - ATAACAATGAGGTTTTGGCGT) on contig 6 (6870868 nt) Astart:1138294 Aend:1138273 Bstart:1129867 Bend:1129888 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#48 -> -3151847 <- tig#12, B=487359 nt (start:40516, end:40537) A=2766197 nt (start:2725004, end:2724983) CALCULATED DISTANCE APART: -3151847 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#77 -> -122338 <- tig#99, B=160344 nt (start:25079, end:25100) A=88102 nt (start:7073, end:7052) CALCULATED DISTANCE APART: -122338 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#51 -> -1342604 <- tig#r.12, A=875428 nt (start:56791, end:56812) B=2766197 nt (start:2222230, end:2222251) CALCULATED DISTANCE APART: -1342604 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082742, end:2082763) B=976128 nt (start:960780, end:960801) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AAATTTCGTGGTTTAATATTG - TAAATATTGAGTCAGACTTTA) on contig 51 (875428 nt) Astart:133691 Aend:133670 Bstart:867755 Bend:867734 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -214292 <- tig#6, A=354284 nt (start:134115, end:134136) B=6870868 nt (start:14123, end:14102) CALCULATED DISTANCE APART: -214292 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.29 -> -1609386 <- tig#35, B=1463708 nt (start:953884, end:953863) A=1135475 nt (start:675502, end:675481) CALCULATED DISTANCE APART: -1609386 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#283 -> -3818458 <- tig#2, A=1768 nt (start:373, end:394) B=5014909 nt (start:3837063, end:3837042) CALCULATED DISTANCE APART: -3818458 < -2000 Pairs unsatisfied in distance within a contig. Pair (CATGAATATTATTTATGTTTT - TTGAGCGAAGCGGTTTATATT) on contig 34 (1705564 nt) Astart:679914 Aend:679893 Bstart:664951 Bend:664972 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460429, end:460408) A=1345436 nt (start:25231, end:25210) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:281937, end:281958) B=2196 nt (start:118, end:97) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259322, end:2259343) B=356404 nt (start:343902, end:343923) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#118 -> -33564 <- tig#97, B=66247 nt (start:37947, end:37968) A=91050 nt (start:25264, end:25243) CALCULATED DISTANCE APART: -33564 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12606, end:12585) A=91302 nt (start:11587, end:11566) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#42 -> -1103014 <- tig#r.43, A=659641 nt (start:547257, end:547278) B=1235946 nt (start:225316, end:225337) CALCULATED DISTANCE APART: -1103014 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:458764, end:458743) A=1345436 nt (start:26896, end:26875) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10713, end:10692) A=2766197 nt (start:2150850, end:2150829) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig. Pair (GTCACGCTTATCATTCTTCCT - TTTGATTAATAATTTAATTGA) on contig 5 (3689108 nt) Astart:1171737 Aend:1171758 Bstart:1186873 Bend:1186852 CALCULATED DISTANCE APART: 15136 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -1335758 <- tig#4, B=3747885 nt (start:2856822, end:2856843) A=3837743 nt (start:464695, end:464674) CALCULATED DISTANCE APART: -1335758 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CATATAGACAGTAATCATGAG - ATAAGGCAGACCGGACCACGA) on contig 19 (3531543 nt) Astart:3058473 Aend:3058452 Bstart:3050247 Bend:3050226 Pairs unsatisfied in distance within a contig. Pair (TCGCATTCTTTGACTTGCTTA - GGTGTACATCGATGATATGTT) on contig 131 (36503 nt) Astart:30591 Aend:30570 Bstart:14222 Bend:14243 CALCULATED DISTANCE APART: 16369 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#38 -> -1215223 <- tig#78, B=1143067 nt (start:38505, end:38526) A=184063 nt (start:130661, end:130640) CALCULATED DISTANCE APART: -1215223 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#590 -> -77508 <- tig#38, A=1018 nt (start:492, end:513) B=1143067 nt (start:96982, end:96961) CALCULATED DISTANCE APART: -77508 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TCCAATCTAAATATATATAAT - ATCAAATTCAGTGAAGCAAAT) on contig 4 (3837743 nt) Astart:2358006 Aend:2358027 Bstart:2360056 Bend:2360077 Pairs unsatisfied in distance within a contig. Pair (CTGACAAGAGAGCCGGTGTGG - AAATCTAAGCATTTCCGTGCT) on contig 15 (3712591 nt) Astart:3350115 Aend:3350136 Bstart:3375103 Bend:3375082 CALCULATED DISTANCE APART: 24988 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.115 -> -3755846 <- tig#9, B=66709 nt (start:40968, end:40947) A=3747885 nt (start:3734878, end:3734857) CALCULATED DISTANCE APART: -3755846 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#53 -> -314812 <- tig#75, B=354284 nt (start:24814, end:24835) A=373953 nt (start:5342, end:5321) CALCULATED DISTANCE APART: -314812 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282442, end:282463) B=2196 nt (start:623, end:602) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CAGAGCAAACACTAACCTTAG - CGAGATTTTTAACGGTGGGCG) on contig 15 (3712591 nt) Astart:1791734 Aend:1791713 Bstart:2055787 Bend:2055808 Pairs unsatisfied in pairing logic within a contig. Pair (CAATTAAGCTAGCTAGTTGAG - CCTACCTTTCCAAACATACCA) on contig 19 (3531543 nt) Astart:3059851 Aend:3059830 Bstart:3048872 Bend:3048851 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.6 -> -5316541 <- tig#14, B=6870868 nt (start:4769087, end:4769066) A=2271162 nt (start:567454, end:567433) CALCULATED DISTANCE APART: -5316541 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728838, end:728859) A=1096 nt (start:923, end:902) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16300, end:16279) A=1227811 nt (start:7515, end:7494) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#6 -> -3712398 <- tig#1, A=6870868 nt (start:5007577, end:5007598) B=4853111 nt (start:1869107, end:1869086) CALCULATED DISTANCE APART: -3712398 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -621133 <- tig#r.66, A=2766197 nt (start:2129368, end:2129389) B=201913 nt (start:197609, end:197630) CALCULATED DISTANCE APART: -621133 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGTCAAGAAACACATTGTATT - TCTCAAATACTGGCTCCGTAT) on contig 19 (3531543 nt) Astart:3059426 Aend:3059405 Bstart:3049297 Bend:3049276 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259537, end:2259558) B=356404 nt (start:343687, end:343708) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGGAACCTAGGGTTAACTCAG - AAATATTTAAAACATGGTAAT) on contig 14 (2271162 nt) Astart:658356 Aend:658335 Bstart:495555 Bend:495534 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#77 -> -122338 <- tig#99, B=160344 nt (start:25159, end:25180) A=88102 nt (start:7153, end:7132) CALCULATED DISTANCE APART: -122338 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:458809, end:458788) A=1345436 nt (start:26851, end:26830) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17550, end:17529) A=1227811 nt (start:6265, end:6244) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#169 -> -355311 <- tig#r.36, A=12735 nt (start:9334, end:9355) B=855454 nt (start:483544, end:483565) CALCULATED DISTANCE APART: -355311 < -2000 Pairs unsatisfied in distance within a contig. Pair (AATGGGGAACGGGACAGGACC - CAAAATATATCCAACTATGCG) on contig 5 (3689108 nt) Astart:1169657 Aend:1169678 Bstart:1184792 Bend:1184771 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.29 -> -1609395 <- tig#35, B=1463708 nt (start:953629, end:953608) A=1135475 nt (start:675766, end:675745) CALCULATED DISTANCE APART: -1609395 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33539, end:33518) A=855454 nt (start:18910, end:18889) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16465, end:16444) A=1227811 nt (start:7350, end:7329) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3583 <- tig#26, B=1171658 nt (start:1171543, end:1171564) A=1332708 nt (start:23468, end:23447) CALCULATED DISTANCE APART: -3583 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#48 -> -91507 <- tig#r.67, A=487359 nt (start:470685, end:470706) B=197815 nt (start:102982, end:103003) CALCULATED DISTANCE APART: -91507 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTCGTAGCTCTAAAGTGAAAT - AAGCTCCTTGATGGAGTGTCA) on contig 19 (3531543 nt) Astart:3059601 Aend:3059580 Bstart:3049122 Bend:3049101 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.459 -> -147882 <- tig#53, B=1183 nt (start:71, end:50) A=354284 nt (start:167811, end:167790) CALCULATED DISTANCE APART: -147882 < -2000 Pairs unsatisfied in distance within a contig. Pair (CCGTTCAAGGCTAAGACAAAC - GATTCTTGCCGAACCTTGAGT) on contig 27 (1227811 nt) Astart:434620 Aend:434641 Bstart:450873 Bend:450852 CALCULATED DISTANCE APART: 16253 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -4201 <- tig#r.96, A=262460 nt (start:244521, end:244542) B=91302 nt (start:85040, end:85061) CALCULATED DISTANCE APART: -4201 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -1168778 <- tig#384, A=5070776 nt (start:3882580, end:3882601) B=1359 nt (start:582, end:561) CALCULATED DISTANCE APART: -1168778 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16490, end:16469) A=1227811 nt (start:7325, end:7304) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#37 -> -4025057 <- tig#r.2, A=853709 nt (start:538617, end:538638) B=5014909 nt (start:1284944, end:1284965) CALCULATED DISTANCE APART: -4025057 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460569, end:460548) A=1345436 nt (start:25091, end:25070) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -3661464 <- tig#r.3, A=262460 nt (start:68597, end:68618) B=3889482 nt (start:401881, end:401902) CALCULATED DISTANCE APART: -3661464 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#7 -> -3853079 <- tig#36, A=3534247 nt (start:146009, end:146030) B=855454 nt (start:484841, end:484820) CALCULATED DISTANCE APART: -3853079 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GGAGTCATTCGTTTTTGTTTT - TTATCTCCATCGCATCTCATA) on contig 19 (3531543 nt) Astart:3060056 Aend:3060035 Bstart:3048667 Bend:3048646 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#22 -> -6369340 <- tig#6, B=1636463 nt (start:14722, end:14743) A=6870868 nt (start:4767599, end:4767578) CALCULATED DISTANCE APART: -6369340 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33334, end:33313) A=855454 nt (start:19115, end:19094) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135788, end:135809) B=15068 nt (start:1888, end:1909) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10568, end:10547) A=2766197 nt (start:2150995, end:2150974) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig. Pair (GCTCTTGATGTTACAATGCAG - ATCTTGTCGGGGTGGAGCAGA) on contig 37 (853709 nt) Astart:539067 Aend:539088 Bstart:551737 Bend:551716 CALCULATED DISTANCE APART: 12670 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259617, end:2259638) B=356404 nt (start:343607, end:343628) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATCACTCATGAAGCCGAAAGC - CAAAACTCTAAACTAAAAGTT) on contig 2 (5014909 nt) Astart:1269226 Aend:1269247 Bstart:1283888 Bend:1283867 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in pairing logic within a contig. Pair (CCTAGGGTTAACTCAGGGCGG - TAATTAAATATTTAAAACATG) on contig 14 (2271162 nt) Astart:658351 Aend:658330 Bstart:495560 Bend:495539 Pairs unsatisfied in distance within a contig. Pair (ATTTGATTAAAGAGTGATAAT - GTTCTAAAGCCCAGAAGGGGA) on contig 6 (6870868 nt) Astart:1138224 Aend:1138203 Bstart:1129797 Bend:1129818 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#47 -> -293197 <- tig#6, A=471458 nt (start:172094, end:172115) B=6870868 nt (start:13833, end:13812) CALCULATED DISTANCE APART: -293197 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#7 -> -3853079 <- tig#36, A=3534247 nt (start:146004, end:146025) B=855454 nt (start:484836, end:484815) CALCULATED DISTANCE APART: -3853079 < -2000 Pairs unsatisfied in distance within a contig. Pair (CACATTTTTCACAACCTGTAT - TGGAAGTGTATACATGTTACT) on contig 10 (3047199 nt) Astart:790159 Aend:790138 Bstart:766419 Bend:766440 CALCULATED DISTANCE APART: 23740 Pairs unsatisfied in distance within a contig. Pair (GCTGGACCATTTATATTATTC - GAGACAAAGAGATAACCAAAA) on contig 34 (1705564 nt) Astart:679339 Aend:679318 Bstart:664376 Bend:664397 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in pairing logic within a contig. Pair (CGTTGTTCTGACTCTTTTGGT - AAGAAATGTTTGATTTTCCTA) on contig 19 (3531543 nt) Astart:3060151 Aend:3060130 Bstart:3048572 Bend:3048551 Pairs unsatisfied in distance within a contig. Pair (TCTGTGCATGAAAAACATAAG - GACCAACCAATTCTTTAACAC) on contig 2 (5014909 nt) Astart:1269876 Aend:1269897 Bstart:1284538 Bend:1284517 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig. Pair (AGGATACAATTCTTACGCCTT - ATCTTAAAGGCGTAAGAATTG) on contig 34 (1705564 nt) Astart:1679301 Aend:1679280 Bstart:1679274 Bend:1679295 CALCULATED DISTANCE APART: 27 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#53 -> -1687810 <- tig#34, B=354284 nt (start:325775, end:325796) A=1705564 nt (start:1679301, end:1679280) CALCULATED DISTANCE APART: -1687810 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.34 -> -1667488 <- tig#93, B=1705564 nt (start:1679305, end:1679284) A=152036 nt (start:8183, end:8162) CALCULATED DISTANCE APART: -1667488 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#37 -> -4025055 <- tig#r.2, A=853709 nt (start:539052, end:539073) B=5014909 nt (start:1284511, end:1284532) CALCULATED DISTANCE APART: -4025055 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCACCAAGAACTGAAACGGAT - GAATGGCCGATCAAACAGATT) on contig 14 (2271162 nt) Astart:2001233 Aend:2001212 Bstart:1734466 Bend:1734487 CALCULATED DISTANCE APART: 266767 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#34 -> -2271848 <- tig#31, A=1705564 nt (start:174116, end:174137) B=976128 nt (start:760400, end:760379) CALCULATED DISTANCE APART: -2271848 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2360, end:2381) A=258385 nt (start:896, end:875) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTGCTGTTGATGAGAAGCCTT - GGACTTACACTTGGACGCCCA) on contig 33 (1290487 nt) Astart:109117 Aend:109138 Bstart:244484 Bend:244505 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -40662 <- tig#443, A=736718 nt (start:676351, end:676372) B=1213 nt (start:295, end:274) CALCULATED DISTANCE APART: -40662 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GTATTTTACTTACATAATATT - AATATCCCGACTGACTCGAAA) on contig 131 (36503 nt) Astart:19748 Aend:19769 Bstart:13867 Bend:13888 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10493, end:10472) A=2766197 nt (start:2151070, end:2151049) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#161 -> -340044 <- tig#r.49, A=15506 nt (start:12107, end:12128) B=399963 nt (start:43318, end:43339) CALCULATED DISTANCE APART: -340044 < -2000 Pairs unsatisfied in distance within a contig. Pair (GAAACTGGGGTCAGTTGTGTT - ATTTATAATCCTAGTCAAGTA) on contig 1 (4853111 nt) Astart:346440 Aend:346461 Bstart:391717 Bend:391696 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#173 -> -6636294 <- tig#6, A=11377 nt (start:10438, end:10459) B=6870868 nt (start:6655355, end:6655334) CALCULATED DISTANCE APART: -6636294 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#46 -> -3500669 <- tig#6, A=577887 nt (start:567005, end:567026) B=6870868 nt (start:3509787, end:3509766) CALCULATED DISTANCE APART: -3500669 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728123, end:728144) A=1096 nt (start:208, end:187) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#26 -> -90650 <- tig#95, B=1332708 nt (start:1310528, end:1310549) A=92653 nt (start:88470, end:88449) CALCULATED DISTANCE APART: -90650 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282912, end:282933) B=2196 nt (start:1093, end:1072) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CATAAACCGCAGAAACCGAAG - CTTCTTATGAGTTATGACCCA) on contig 15 (3712591 nt) Astart:1716688 Aend:1716709 Bstart:1731330 Bend:1731351 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.403 -> -2330792 <- tig#13, B=1321 nt (start:910, end:889) A=2650694 nt (start:2349882, end:2349861) CALCULATED DISTANCE APART: -2330792 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12116, end:12095) A=91302 nt (start:12077, end:12056) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#54 -> -327960 <- tig#r.53, A=625914 nt (start:323932, end:323953) B=354284 nt (start:308306, end:308327) CALCULATED DISTANCE APART: -327960 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#47 -> -314050 <- tig#6, A=471458 nt (start:149626, end:149647) B=6870868 nt (start:12218, end:12197) CALCULATED DISTANCE APART: -314050 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#305 -> -2202335 <- tig#r.19, A=1638 nt (start:22, end:43) B=3531543 nt (start:1310824, end:1310845) CALCULATED DISTANCE APART: -2202335 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -1443756 <- tig#r.4, A=2650694 nt (start:2066523, end:2066544) B=3837743 nt (start:2958158, end:2958179) CALCULATED DISTANCE APART: -1443756 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#48 -> -156052 <- tig#51, B=487359 nt (start:406376, end:406397) A=875428 nt (start:95069, end:95048) CALCULATED DISTANCE APART: -156052 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:729977, end:729998) B=3531543 nt (start:3199551, end:3199530) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3583 <- tig#26, B=1171658 nt (start:1171288, end:1171309) A=1332708 nt (start:23213, end:23192) CALCULATED DISTANCE APART: -3583 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCTCATCGTTGAGGTTTTAGA - GAACACTAAGATATTAGCACC) on contig 1 (4853111 nt) Astart:346580 Aend:346601 Bstart:391857 Bend:391836 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#20 -> -1459346 <- tig#r.32, A=2328057 nt (start:1294233, end:1294254) B=972151 nt (start:526629, end:526650) CALCULATED DISTANCE APART: -1459346 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460594, end:460573) A=1345436 nt (start:25066, end:25045) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.101 -> -46850 <- tig#107, B=84691 nt (start:24119, end:24098) A=68734 nt (start:42731, end:42710) CALCULATED DISTANCE APART: -46850 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#283 -> -3818458 <- tig#2, A=1768 nt (start:663, end:684) B=5014909 nt (start:3837353, end:3837332) CALCULATED DISTANCE APART: -3818458 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -1168778 <- tig#384, A=5070776 nt (start:3882705, end:3882726) B=1359 nt (start:707, end:686) CALCULATED DISTANCE APART: -1168778 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -3661458 <- tig#r.3, A=262460 nt (start:68616, end:68637) B=3889482 nt (start:401868, end:401889) CALCULATED DISTANCE APART: -3661458 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459859, end:459838) A=1345436 nt (start:25801, end:25780) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185634, end:4185613) A=3712591 nt (start:927, end:906) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TAACGAAGAACTTGTATGGAT - TTTTTTTTACAGCAAAAAATT) on contig 19 (3531543 nt) Astart:3059198 Aend:3059177 Bstart:3049522 Bend:3049501 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#7 -> -5463086 <- tig#r.10, A=3534247 nt (start:705576, end:705597) B=3047199 nt (start:392784, end:392805) CALCULATED DISTANCE APART: -5463086 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -214292 <- tig#6, A=354284 nt (start:133975, end:133996) B=6870868 nt (start:13983, end:13962) CALCULATED DISTANCE APART: -214292 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#6 -> -3712398 <- tig#1, A=6870868 nt (start:5007572, end:5007593) B=4853111 nt (start:1869102, end:1869081) CALCULATED DISTANCE APART: -3712398 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CCTTGATATAGTTAAATACAT - AACTTGTAGTAGCCAAAACTC) on contig 19 (3531543 nt) Astart:3058393 Aend:3058372 Bstart:3050327 Bend:3050306 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#3 -> -3618470 <- tig#27, B=3889482 nt (start:316499, end:316520) A=1227811 nt (start:65487, end:65466) CALCULATED DISTANCE APART: -3618470 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#49 -> -1152645 <- tig#r.43, A=399963 nt (start:352051, end:352072) B=1235946 nt (start:111213, end:111234) CALCULATED DISTANCE APART: -1152645 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.95 -> -773240 <- tig#35, B=92653 nt (start:92435, end:92414) A=1135475 nt (start:700805, end:700784) CALCULATED DISTANCE APART: -773240 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#77 -> -122338 <- tig#99, B=160344 nt (start:25099, end:25120) A=88102 nt (start:7093, end:7072) CALCULATED DISTANCE APART: -122338 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#34 -> -1056103 <- tig#r.65, A=1705564 nt (start:662581, end:662602) B=286124 nt (start:253004, end:253025) CALCULATED DISTANCE APART: -1056103 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#27 -> -1021403 <- tig#26, B=1227811 nt (start:818203, end:818224) A=1332708 nt (start:631795, end:631774) CALCULATED DISTANCE APART: -1021403 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -214291 <- tig#6, A=354284 nt (start:133231, end:133252) B=6870868 nt (start:13238, end:13217) CALCULATED DISTANCE APART: -214291 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATTGACTAATAGAGAGATGCA - GTGCACTTCTAGCTTTCCGAT) on contig 7 (3534247 nt) Astart:2255782 Aend:2255761 Bstart:2238994 Bend:2238973 Pairs unsatisfied in pairing logic within a contig. Pair (AAAATTAATTATGAGTAAGTA - TTGATATATGTAAATATAATA) on contig 15 (3712591 nt) Astart:1717173 Aend:1717194 Bstart:1730845 Bend:1730866 Pairs unsatisfied in distance within a contig. Pair (TATTTTGCAATTCTTCTTACT - TGAGAAAAATCATAAAATTAC) on contig 71 (271268 nt) Astart:123890 Aend:123869 Bstart:118516 Bend:118537 CALCULATED DISTANCE APART: 5374 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#14 -> -765455 <- tig#43, B=2271162 nt (start:2083014, end:2083035) A=1235946 nt (start:597307, end:597286) CALCULATED DISTANCE APART: -765455 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATTCATCTTTTAGGTTGGGGA - GGTATTTCATTCCTACTCATA) on contig 60 (232804 nt) Astart:31347 Aend:31368 Bstart:57625 Bend:57604 CALCULATED DISTANCE APART: 26278 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#7 -> -3580537 <- tig#r.32, A=3534247 nt (start:380427, end:380448) B=972151 nt (start:525434, end:525455) CALCULATED DISTANCE APART: -3580537 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TAGAAACTTATGCTGAGAAGT - AAAAATAAAGCAAAGTATTGT) on contig 7 (3534247 nt) Astart:2255552 Aend:2255531 Bstart:2239230 Bend:2239209 Pairs unsatisfied in distance within a contig. Pair (TTGCAGGCAGGGCTACTCTTG - TCGGGTTTAAAGTTCATCTTC) on contig 5 (3689108 nt) Astart:1170122 Aend:1170143 Bstart:1185257 Bend:1185236 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17300, end:17279) A=1227811 nt (start:6515, end:6494) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.25 -> -1129234 <- tig#46, B=1290536 nt (start:1135525, end:1135504) A=577887 nt (start:13709, end:13688) CALCULATED DISTANCE APART: -1129234 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#30 -> -340634 <- tig#93, A=1050452 nt (start:834057, end:834078) B=152036 nt (start:144239, end:144218) CALCULATED DISTANCE APART: -340634 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#265 -> -3126344 <- tig#4, A=1946 nt (start:1871, end:1892) B=3837743 nt (start:3146269, end:3146248) CALCULATED DISTANCE APART: -3126344 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#18 -> -703519 <- tig#31, A=1738864 nt (start:1186638, end:1186659) B=976128 nt (start:171293, end:171272) CALCULATED DISTANCE APART: -703519 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTTCCAAATCACTTCACATTC - TTCATTGTTCAGAAGCATTTA) on contig 6 (6870868 nt) Astart:1138189 Aend:1138168 Bstart:1129762 Bend:1129783 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.48 -> -3108449 <- tig#12, B=487359 nt (start:404185, end:404164) A=2766197 nt (start:2724264, end:2724243) CALCULATED DISTANCE APART: -3108449 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -40662 <- tig#443, A=736718 nt (start:676731, end:676752) B=1213 nt (start:675, end:654) CALCULATED DISTANCE APART: -40662 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260992, end:2261013) B=356404 nt (start:342232, end:342253) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33619, end:33598) A=855454 nt (start:18830, end:18809) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig. Pair (GGTTTTCAAAGTTGTATTATT - ATGGGATTGCCTAGGACTAGA) on contig 30 (1050452 nt) Astart:649794 Aend:649815 Bstart:665560 Bend:665539 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#174 -> -7280 <- tig#65, B=11297 nt (start:10418, end:10439) A=286124 nt (start:26401, end:26380) CALCULATED DISTANCE APART: -7280 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#70 -> -69715 <- tig#r.7, A=236880 nt (start:156120, end:156141) B=3534247 nt (start:3525292, end:3525313) CALCULATED DISTANCE APART: -69715 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4186284, end:4186263) A=3712591 nt (start:277, end:256) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#74 -> -3715493 <- tig#7, B=238371 nt (start:26390, end:26411) A=3534247 nt (start:3523512, end:3523491) CALCULATED DISTANCE APART: -3715493 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCAAAAACTTACAACTATGAG - TTCCCCGGTAAGTGAATAAGG) on contig 41 (667251 nt) Astart:88093 Aend:88072 Bstart:75413 Bend:75434 CALCULATED DISTANCE APART: 12680 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#18 -> -4076865 <- tig#15, B=1738864 nt (start:576704, end:576725) A=3712591 nt (start:2934705, end:2934684) CALCULATED DISTANCE APART: -4076865 < -2000 Pairs unsatisfied in distance within a contig. Pair (GATGCTGAAGATTGTGAGTCC - AAGAGAGCTAGCTTACCAGGT) on contig 6 (6870868 nt) Astart:4411854 Aend:4411875 Bstart:4445808 Bend:4445787 CALCULATED DISTANCE APART: 33954 Pairs unsatisfied in distance within a contig. Pair (TTGCATTGCAGGCAGGGCTAC - TTTAAAGTTCATCTTCTTCTT) on contig 5 (3689108 nt) Astart:1170117 Aend:1170138 Bstart:1185252 Bend:1185231 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4186199, end:4186178) A=3712591 nt (start:362, end:341) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728218, end:728239) A=1096 nt (start:303, end:282) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig. Pair (AATAAATTAGAGACTGGTTTA - GAGATTTGTCATGGAATTTAG) on contig 30 (1050452 nt) Astart:650729 Aend:650750 Bstart:666495 Bend:666474 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#327 -> -113680 <- tig#51, B=1511 nt (start:1397, end:1418) A=875428 nt (start:133566, end:133545) CALCULATED DISTANCE APART: -113680 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219496, end:4219475) A=2598 nt (start:2125, end:2104) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136358, end:136379) B=15068 nt (start:1318, end:1339) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#129 -> -29784 <- tig#167, A=39603 nt (start:30, end:51) B=25236 nt (start:10211, end:10190) CALCULATED DISTANCE APART: -29784 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#129 -> -1698869 <- tig#34, A=39603 nt (start:30, end:51) B=1705564 nt (start:1679296, end:1679275) CALCULATED DISTANCE APART: -1698869 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#129 -> -20637 <- tig#r.474, A=39603 nt (start:30, end:51) B=1158 nt (start:94, end:115) CALCULATED DISTANCE APART: -20637 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082687, end:2082708) B=976128 nt (start:960835, end:960856) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459319, end:459298) A=1345436 nt (start:26341, end:26320) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#7 -> -3100855 <- tig#45, A=3534247 nt (start:653047, end:653068) B=528133 nt (start:239655, end:239634) CALCULATED DISTANCE APART: -3100855 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TGCCTCTCATACTTTCCACAT - CTCAGGTCGAGCTTTCGTCGT) on contig 9 (3747885 nt) Astart:2878244 Aend:2878223 Bstart:2862921 Bend:2862900 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136633, end:136654) B=15068 nt (start:1043, end:1064) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:134923, end:134944) B=15068 nt (start:2753, end:2774) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3583 <- tig#26, B=1171658 nt (start:1171163, end:1171184) A=1332708 nt (start:23088, end:23067) CALCULATED DISTANCE APART: -3583 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#40 -> -506904 <- tig#r.79, A=668174 nt (start:201472, end:201493) B=136600 nt (start:76398, end:76419) CALCULATED DISTANCE APART: -506904 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#265 -> -3126344 <- tig#4, A=1946 nt (start:1781, end:1802) B=3837743 nt (start:3146179, end:3146158) CALCULATED DISTANCE APART: -3126344 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2261052, end:2261073) B=356404 nt (start:342172, end:342193) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig. Pair (TATATCTAAAGAAGCACAAAA - TTTATGGTACTAATTGTAATG) on contig 6 (6870868 nt) Astart:1137904 Aend:1137883 Bstart:1129477 Bend:1129498 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282822, end:282843) B=2196 nt (start:1003, end:982) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#5 -> -2510598 <- tig#43, A=3689108 nt (start:1493262, end:1493283) B=1235946 nt (start:334752, end:334731) CALCULATED DISTANCE APART: -2510598 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#11 -> -3815667 <- tig#56, B=4628067 nt (start:890922, end:890943) A=262460 nt (start:98522, end:98501) CALCULATED DISTANCE APART: -3815667 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCTGCTCTTATGCATTTTCTT - GCCAGATAACAATGAGGTTTT) on contig 6 (6870868 nt) Astart:1138289 Aend:1138268 Bstart:1129862 Bend:1129883 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#11 -> -5298448 <- tig#r.19, A=4628067 nt (start:147133, end:147154) B=3531543 nt (start:2694029, end:2694050) CALCULATED DISTANCE APART: -5298448 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.364 -> -57406 <- tig#98, B=1417 nt (start:1383, end:1362) A=88184 nt (start:76023, end:76002) CALCULATED DISTANCE APART: -57406 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.27 -> -1325786 <- tig#43, B=1227811 nt (start:1011248, end:1011227) A=1235946 nt (start:334538, end:334517) CALCULATED DISTANCE APART: -1325786 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGAGAAAAAAAAACGCACACT - AAATGTATCACTCGTCTTCCT) on contig 7 (3534247 nt) Astart:2256072 Aend:2256051 Bstart:2238710 Bend:2238689 Pairs unsatisfied in distance within a contig. Pair (AATATTACTAAGGTAAGTCAC - ACAAAGGAGAAGGAAGTGTGA) on contig 5 (3689108 nt) Astart:1178682 Aend:1178661 Bstart:1163548 Bend:1163569 CALCULATED DISTANCE APART: 15134 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460684, end:460663) A=1345436 nt (start:24976, end:24955) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -40662 <- tig#443, A=736718 nt (start:676561, end:676582) B=1213 nt (start:505, end:484) CALCULATED DISTANCE APART: -40662 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTGTGTAAAGGTTTTTCCTTT - TATGCCTTGGTCCGAGCTCTC) on contig 30 (1050452 nt) Astart:650434 Aend:650455 Bstart:666200 Bend:666179 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#39 -> -500696 <- tig#r.30, A=736718 nt (start:679376, end:679397) B=1050452 nt (start:587098, end:587119) CALCULATED DISTANCE APART: -500696 < -2000 Pairs unsatisfied in distance within a contig. Pair (GACGAGGAGTGGTCGAGGATT - CCACTCCTCGTCCTGGTCGAC) on contig 95 (92653 nt) Astart:92405 Aend:92384 Bstart:92393 Bend:92414 CALCULATED DISTANCE APART: 12 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -7514397 <- tig#2, B=4628067 nt (start:4149977, end:4149956) A=5014909 nt (start:3384420, end:3384399) CALCULATED DISTANCE APART: -7514397 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGGGCTAAGCTTGGAAAAGAA - ATAAAGAGATGATAATGGAGA) on contig 1 (4853111 nt) Astart:346920 Aend:346941 Bstart:392197 Bend:392176 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#9 -> -2729019 <- tig#69, A=3747885 nt (start:1134170, end:1134191) B=186132 nt (start:135304, end:135283) CALCULATED DISTANCE APART: -2729019 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TATTACCTTGCTTCGTGGTTA - AATTGTCCGCAAATATATACA) on contig 15 (3712591 nt) Astart:1718853 Aend:1718874 Bstart:1729165 Bend:1729186 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#14 -> -765455 <- tig#43, B=2271162 nt (start:2083074, end:2083095) A=1235946 nt (start:597367, end:597346) CALCULATED DISTANCE APART: -765455 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#16 -> -1845669 <- tig#270, B=2098954 nt (start:233421, end:233442) A=1880 nt (start:136, end:115) CALCULATED DISTANCE APART: -1845669 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#33 -> -492044 <- tig#32, A=1290487 nt (start:1235662, end:1235683) B=972151 nt (start:457219, end:457198) CALCULATED DISTANCE APART: -492044 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGGGGTCAGTTGTGTTGAATC - AGTGCATTTATAATCCTAGTC) on contig 1 (4853111 nt) Astart:346445 Aend:346466 Bstart:391722 Bend:391701 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig. Pair (GAAGATAGATGAATTAAATAA - GAACCAGAACAAGAACGCATA) on contig 2 (5014909 nt) Astart:1269316 Aend:1269337 Bstart:1283978 Bend:1283957 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:729802, end:729823) B=3531543 nt (start:3199376, end:3199355) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GCTTTTTTTGCTTCTGATCGT - ATGGCGGAGCCACCGCTGGTA) on contig 8 (5070776 nt) Astart:792499 Aend:792520 Bstart:760698 Bend:760719 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#39 -> -357448 <- tig#r.48, A=736718 nt (start:459292, end:459313) B=487359 nt (start:387337, end:387358) CALCULATED DISTANCE APART: -357448 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -48966 <- tig#136, A=354284 nt (start:325782, end:325803) B=49085 nt (start:40464, end:40443) CALCULATED DISTANCE APART: -48966 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#74 -> -453293 <- tig#r.47, A=238371 nt (start:73398, end:73419) B=471458 nt (start:163138, end:163159) CALCULATED DISTANCE APART: -453293 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.115 -> -3755846 <- tig#9, B=66709 nt (start:41013, end:40992) A=3747885 nt (start:3734833, end:3734812) CALCULATED DISTANCE APART: -3755846 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.31 -> -2968365 <- tig#4, B=976128 nt (start:201387, end:201366) A=3837743 nt (start:2786978, end:2786957) CALCULATED DISTANCE APART: -2968365 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#9 -> -3369808 <- tig#22, A=3747885 nt (start:358108, end:358129) B=1636463 nt (start:31, end:10) CALCULATED DISTANCE APART: -3369808 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#10 -> -2964290 <- tig#103, B=3047199 nt (start:261866, end:261887) A=211876 nt (start:198957, end:198936) CALCULATED DISTANCE APART: -2964290 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGAAAGTGAATGAGCCACAAG - TTTATTTTGTTTTTTCTCTGA) on contig 19 (3531543 nt) Astart:3059023 Aend:3059002 Bstart:3049697 Bend:3049676 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730032, end:730053) B=3531543 nt (start:3199606, end:3199585) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.45 -> -5709644 <- tig#6, B=528133 nt (start:188533, end:188512) A=6870868 nt (start:5541111, end:5541090) CALCULATED DISTANCE APART: -5709644 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGACTCAAATTTTACATTTAA - GGAGACAAGCCTGTTGCTGCA) on contig 6 (6870868 nt) Astart:1138049 Aend:1138028 Bstart:1129622 Bend:1129643 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4186254, end:4186233) A=3712591 nt (start:307, end:286) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#9 -> -6067963 <- tig#12, A=3747885 nt (start:357888, end:357909) B=2766197 nt (start:2697966, end:2697945) CALCULATED DISTANCE APART: -6067963 < -2000 Pairs unsatisfied in distance within a contig. Pair (GCCTTGCTTACTTGTCCAATG - ACAGCCCTGCCAATTAAAATG) on contig 15 (3712591 nt) Astart:3350070 Aend:3350091 Bstart:3375058 Bend:3375037 CALCULATED DISTANCE APART: 24988 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#39 -> -500696 <- tig#r.30, A=736718 nt (start:679431, end:679452) B=1050452 nt (start:587043, end:587064) CALCULATED DISTANCE APART: -500696 < -2000 Pairs unsatisfied in distance within a contig. Pair (CAATTTGTTCACTGCATTCTT - TAGACAAGTCTTTCATCATGA) on contig 37 (853709 nt) Astart:538952 Aend:538973 Bstart:551622 Bend:551601 CALCULATED DISTANCE APART: 12670 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2930, end:2951) A=258385 nt (start:1466, end:1445) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TGATGCTTGTGTGTGTGATCT - CCGGACCGAGAAAGAAAGATT) on contig 15 (3712591 nt) Astart:1792086 Aend:1792065 Bstart:2056147 Bend:2056168 Pairs unsatisfied in distance within a contig. Pair (GTATAGTGGAAAAGTGAGGTT - GTGTATTCCTCAGGAATTCCA) on contig 37 (853709 nt) Astart:838904 Aend:838883 Bstart:823399 Bend:823420 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#57 -> -3231864 <- tig#7, A=258385 nt (start:255994, end:256015) B=3534247 nt (start:3249473, end:3249452) CALCULATED DISTANCE APART: -3231864 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#116 -> -103158 <- tig#127, B=61239 nt (start:18136, end:18157) A=80830 nt (start:80055, end:80034) CALCULATED DISTANCE APART: -103158 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#81 -> -3967 <- tig#189, A=258617 nt (start:240904, end:240925) B=7795 nt (start:6254, end:6233) CALCULATED DISTANCE APART: -3967 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728783, end:728804) A=1096 nt (start:868, end:847) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:1780, end:1801) A=258385 nt (start:316, end:295) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459124, end:459103) A=1345436 nt (start:26536, end:26515) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#14 -> -765455 <- tig#43, B=2271162 nt (start:2083004, end:2083025) A=1235946 nt (start:597297, end:597276) CALCULATED DISTANCE APART: -765455 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6228 <- tig#57, B=27696 nt (start:1574, end:1595) A=258385 nt (start:106, end:85) CALCULATED DISTANCE APART: -6228 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259722, end:2259743) B=356404 nt (start:343502, end:343523) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.101 -> -46850 <- tig#107, B=84691 nt (start:24134, end:24113) A=68734 nt (start:42716, end:42695) CALCULATED DISTANCE APART: -46850 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#305 -> -2202335 <- tig#r.19, A=1638 nt (start:47, end:68) B=3531543 nt (start:1310799, end:1310820) CALCULATED DISTANCE APART: -2202335 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#64 -> -195944 <- tig#109, B=211265 nt (start:820, end:841) A=66564 nt (start:5499, end:5478) CALCULATED DISTANCE APART: -195944 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -621133 <- tig#r.66, A=2766197 nt (start:2129818, end:2129839) B=201913 nt (start:197159, end:197180) CALCULATED DISTANCE APART: -621133 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TCTCAGTCCATGATTTGACTT - TGTTATCAGCATATTATTTAT) on contig 15 (3712591 nt) Astart:1717558 Aend:1717579 Bstart:1730460 Bend:1730481 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#127 -> -57440 <- tig#17, B=80830 nt (start:63140, end:63161) A=1959065 nt (start:59750, end:59729) CALCULATED DISTANCE APART: -57440 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#11 -> -3115480 <- tig#31, A=4628067 nt (start:1548142, end:1548163) B=976128 nt (start:55555, end:55534) CALCULATED DISTANCE APART: -3115480 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.47 -> -199642 <- tig#2, B=471458 nt (start:121976, end:121955) A=5014909 nt (start:97666, end:97645) CALCULATED DISTANCE APART: -199642 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17225, end:17204) A=1227811 nt (start:6590, end:6569) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728378, end:728399) A=1096 nt (start:463, end:442) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10328, end:10307) A=2766197 nt (start:2151235, end:2151214) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -322558 <- tig#r.572, A=2650694 nt (start:2308910, end:2308931) B=1031 nt (start:257, end:278) CALCULATED DISTANCE APART: -322558 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -214292 <- tig#6, A=354284 nt (start:134225, end:134246) B=6870868 nt (start:14233, end:14212) CALCULATED DISTANCE APART: -214292 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -1335763 <- tig#4, B=3747885 nt (start:2857132, end:2857153) A=3837743 nt (start:465010, end:464989) CALCULATED DISTANCE APART: -1335763 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTGGGAAACGAGCCAAGCAGG - GGTATCCATTGAGAGAGGAAA) on contig 2 (5014909 nt) Astart:1268676 Aend:1268697 Bstart:1283338 Bend:1283317 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17545, end:17524) A=1227811 nt (start:6270, end:6249) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GCTGATCACTCACCAGACGTA - TCAATTTCAAGTTTTATTTTG) on contig 15 (3712591 nt) Astart:1716928 Aend:1716949 Bstart:1731090 Bend:1731111 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#10 -> -2925315 <- tig#9, A=3047199 nt (start:251224, end:251245) B=3747885 nt (start:149340, end:149319) CALCULATED DISTANCE APART: -2925315 < -2000 Pairs unsatisfied in distance within a contig. Pair (GGCCTCTGAGAGCACATGCCA - ACGTAACGTAAGCAACGTCGA) on contig 15 (3712591 nt) Astart:2103251 Aend:2103230 Bstart:2056437 Bend:2056458 CALCULATED DISTANCE APART: 46814 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#162 -> -1086708 <- tig#25, A=15068 nt (start:10255, end:10276) B=1290536 nt (start:1101895, end:1101874) CALCULATED DISTANCE APART: -1086708 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#48 -> -585503 <- tig#46, A=487359 nt (start:41359, end:41380) B=577887 nt (start:159503, end:159482) CALCULATED DISTANCE APART: -585503 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.6 -> -5416206 <- tig#35, B=6870868 nt (start:4671635, end:4671614) A=1135475 nt (start:764571, end:764550) CALCULATED DISTANCE APART: -5416206 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260842, end:2260863) B=356404 nt (start:342382, end:342403) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#305 -> -2202335 <- tig#r.19, A=1638 nt (start:137, end:158) B=3531543 nt (start:1310709, end:1310730) CALCULATED DISTANCE APART: -2202335 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.101 -> -46850 <- tig#107, B=84691 nt (start:24144, end:24123) A=68734 nt (start:42706, end:42685) CALCULATED DISTANCE APART: -46850 < -2000 Pairs unsatisfied in distance within a contig. Pair (TAAGAGTGTTTAGACAACACT - ACATTATTTAAATTATGATTA) on contig 127 (80830 nt) Astart:80408 Aend:80387 Bstart:63828 Bend:63849 CALCULATED DISTANCE APART: 16580 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#168 -> -31428 <- tig#54, A=13020 nt (start:8900, end:8921) B=625914 nt (start:47308, end:47287) CALCULATED DISTANCE APART: -31428 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GTATGTATGATGTGTTGGGTA - TGGGTCAAAATTAAGAACATT) on contig 19 (3531543 nt) Astart:3058148 Aend:3058127 Bstart:3050572 Bend:3050551 Pairs unsatisfied in pairing logic within a contig. Pair (CATGAGACCAAGTCATACCTG - TTACATAACATATTTATAAGG) on contig 19 (3531543 nt) Astart:3058458 Aend:3058437 Bstart:3050262 Bend:3050241 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#22 -> -1615678 <- tig#20, B=1636463 nt (start:10976, end:10997) A=2328057 nt (start:10191, end:10170) CALCULATED DISTANCE APART: -1615678 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730917, end:730938) B=3531543 nt (start:3200491, end:3200470) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17575, end:17554) A=1227811 nt (start:6240, end:6219) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#11 -> -5298311 <- tig#r.19, A=4628067 nt (start:147243, end:147264) B=3531543 nt (start:2694056, end:2694077) CALCULATED DISTANCE APART: -5298311 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#3 -> -3618470 <- tig#27, B=3889482 nt (start:316584, end:316605) A=1227811 nt (start:65572, end:65551) CALCULATED DISTANCE APART: -3618470 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTAGTTAGTAAAACATTTAAC - TTTTTGTATAAAGAAAACAAA) on contig 34 (1705564 nt) Astart:679864 Aend:679843 Bstart:664901 Bend:664922 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136613, end:136634) B=15068 nt (start:1063, end:1084) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4186174, end:4186153) A=3712591 nt (start:387, end:366) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TGAAAAATAAAATATGTGATT - CAAGTAAGGGCTTCCACTTCA) on contig 19 (3531543 nt) Astart:3059536 Aend:3059515 Bstart:3049187 Bend:3049166 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#37 -> -1821163 <- tig#25, A=853709 nt (start:114356, end:114377) B=1290536 nt (start:1101810, end:1101789) CALCULATED DISTANCE APART: -1821163 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGTACATTAAGGTCAAAATTT - TAGCAGACCTCAAGGCAAAAG) on contig 118 (66247 nt) Astart:3172 Aend:3193 Bstart:7110 Bend:7089 CALCULATED DISTANCE APART: 3938 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:458599, end:458578) A=1345436 nt (start:27061, end:27040) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig. Pair (GATACACATCTGTTCGATTGA - TTCTCCAGAGAGAGTATTTTT) on contig 34 (1705564 nt) Astart:679779 Aend:679758 Bstart:664816 Bend:664837 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10243, end:10222) A=2766197 nt (start:2151320, end:2151299) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136043, end:136064) B=15068 nt (start:1633, end:1654) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082577, end:2082598) B=976128 nt (start:960945, end:960966) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2420, end:2441) A=258385 nt (start:956, end:935) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#28 -> -913193 <- tig#475, A=1171658 nt (start:238675, end:238696) B=1157 nt (start:210, end:189) CALCULATED DISTANCE APART: -913193 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728583, end:728604) A=1096 nt (start:668, end:647) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#119 -> -7707 <- tig#r.49, A=46878 nt (start:31735, end:31756) B=399963 nt (start:387399, end:387420) CALCULATED DISTANCE APART: -7707 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -1168778 <- tig#384, A=5070776 nt (start:3882420, end:3882441) B=1359 nt (start:422, end:401) CALCULATED DISTANCE APART: -1168778 < -2000 Pairs unsatisfied in distance within a contig. Pair (GTGCTCTGCTCATTGTTGTTT - GTCCTCGATGATGTATGGAAA) on contig 37 (853709 nt) Astart:538747 Aend:538768 Bstart:551417 Bend:551396 CALCULATED DISTANCE APART: 12670 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#34 -> -1056103 <- tig#r.65, A=1705564 nt (start:662546, end:662567) B=286124 nt (start:253039, end:253060) CALCULATED DISTANCE APART: -1056103 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:134823, end:134844) B=15068 nt (start:2853, end:2874) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136553, end:136574) B=15068 nt (start:1123, end:1144) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig. Pair (GGAGAAACTTATTATTAAATC - CATATTTCTAAAGGTATACGG) on contig 5 (3689108 nt) Astart:1169882 Aend:1169903 Bstart:1185017 Bend:1184996 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -2751901 <- tig#12, B=262460 nt (start:70372, end:70351) A=2766197 nt (start:2701529, end:2701508) CALCULATED DISTANCE APART: -2751901 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:134928, end:134949) B=15068 nt (start:2748, end:2769) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#11 -> -5298498 <- tig#r.19, A=4628067 nt (start:147063, end:147084) B=3531543 nt (start:2694049, end:2694070) CALCULATED DISTANCE APART: -5298498 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#51 -> -548583 <- tig#79, B=875428 nt (start:390746, end:390767) A=136600 nt (start:83901, end:83880) CALCULATED DISTANCE APART: -548583 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460179, end:460158) A=1345436 nt (start:25481, end:25460) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.58 -> -1866109 <- tig#19, B=374416 nt (start:14221, end:14200) A=3531543 nt (start:1871888, end:1871867) CALCULATED DISTANCE APART: -1866109 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGTTTTTTATGTGCTCTGCTC - ATGTATGGAAAAAAGAAGACT) on contig 37 (853709 nt) Astart:538737 Aend:538758 Bstart:551407 Bend:551386 CALCULATED DISTANCE APART: 12670 Pairs unsatisfied in pairing logic within a contig. Pair (AATCTCTCTTTTTCTTGCTCT - GATATATTGGACAAAACCCAA) on contig 19 (3531543 nt) Astart:3059991 Aend:3059970 Bstart:3048732 Bend:3048711 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#33 -> -492044 <- tig#32, A=1290487 nt (start:1235687, end:1235708) B=972151 nt (start:457244, end:457223) CALCULATED DISTANCE APART: -492044 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260947, end:2260968) B=356404 nt (start:342277, end:342298) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12131, end:12110) A=91302 nt (start:12062, end:12041) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#22 -> -6369342 <- tig#6, B=1636463 nt (start:14530, end:14551) A=6870868 nt (start:4767409, end:4767388) CALCULATED DISTANCE APART: -6369342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -214292 <- tig#6, A=354284 nt (start:133885, end:133906) B=6870868 nt (start:13893, end:13872) CALCULATED DISTANCE APART: -214292 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CTTCAATGTACCTGCAAAATA - AGTCGTCCAATTTGTGGAGGG) on contig 4 (3837743 nt) Astart:2358311 Aend:2358332 Bstart:2359751 Bend:2359772 Pairs unsatisfied in distance within a contig. Pair (GAAAATTCAGAGTTTTTCTGC - TTCTTTGTGATTTCTGTTCTT) on contig 2 (5014909 nt) Astart:1268596 Aend:1268617 Bstart:1283258 Bend:1283237 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260582, end:2260603) B=356404 nt (start:342642, end:342663) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#67 -> -23669 <- tig#134, B=197815 nt (start:180100, end:180121) A=33262 nt (start:25954, end:25933) CALCULATED DISTANCE APART: -23669 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#19 -> -3197164 <- tig#47, A=3531543 nt (start:469366, end:469387) B=471458 nt (start:154987, end:154966) CALCULATED DISTANCE APART: -3197164 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#11 -> -4878223 <- tig#29, A=4628067 nt (start:683798, end:683819) B=1463708 nt (start:953954, end:953933) CALCULATED DISTANCE APART: -4878223 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460164, end:460143) A=1345436 nt (start:25496, end:25475) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.7 -> -5126456 <- tig#13, B=3534247 nt (start:2549071, end:2549050) A=2650694 nt (start:2597385, end:2597364) CALCULATED DISTANCE APART: -5126456 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTCGGTGGAAGCTCCCTAATT - TTTGATATTACCTAACTTTCT) on contig 30 (1050452 nt) Astart:650594 Aend:650615 Bstart:666360 Bend:666339 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.91 -> -1080797 <- tig#13, B=101959 nt (start:14240, end:14219) A=2650694 nt (start:1086557, end:1086536) CALCULATED DISTANCE APART: -1080797 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135388, end:135409) B=15068 nt (start:2288, end:2309) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#79 -> -654168 <- tig#r.2, A=136600 nt (start:36944, end:36965) B=5014909 nt (start:4440397, end:4440418) CALCULATED DISTANCE APART: -654168 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTATCTTTCCAAATCACTTCA - TGTTCAGAAGCATTTATGTAC) on contig 6 (6870868 nt) Astart:1138194 Aend:1138173 Bstart:1129767 Bend:1129788 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459069, end:459048) A=1345436 nt (start:26591, end:26570) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TAGTGAGATTTTCGTAAATGC - TATAAAAGTTGTGAGTATGCG) on contig 15 (3712591 nt) Astart:1717483 Aend:1717504 Bstart:1730535 Bend:1730556 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#29 -> -810104 <- tig#r.54, A=1463708 nt (start:819050, end:819071) B=625914 nt (start:440468, end:440489) CALCULATED DISTANCE APART: -810104 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -621133 <- tig#r.66, A=2766197 nt (start:2129248, end:2129269) B=201913 nt (start:197729, end:197750) CALCULATED DISTANCE APART: -621133 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AAGCAACCAGAAAAGATGCTC - GTACGTACCCGGAGGCACACA) on contig 15 (3712591 nt) Astart:1718373 Aend:1718394 Bstart:1729645 Bend:1729666 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.86 -> -592847 <- tig#43, B=280231 nt (start:15110, end:15089) A=1235946 nt (start:597737, end:597716) CALCULATED DISTANCE APART: -592847 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#48 -> -449949 <- tig#78, A=487359 nt (start:152715, end:152736) B=184063 nt (start:135305, end:135284) CALCULATED DISTANCE APART: -449949 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#37 -> -642830 <- tig#43, B=853709 nt (start:315215, end:315236) A=1235946 nt (start:124336, end:124315) CALCULATED DISTANCE APART: -642830 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATTTTCCGGTGCTCTCTTCTC - AAACAAAGCATAGATTCCCAT) on contig 1 (4853111 nt) Astart:346250 Aend:346271 Bstart:391527 Bend:391506 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in pairing logic within a contig. Pair (CATATTGTTAATCTACATATT - CCCAGTACCCAGAGATATGGG) on contig 14 (2271162 nt) Astart:1853294 Aend:1853273 Bstart:2002524 Bend:2002503 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.34 -> -1667131 <- tig#93, B=1705564 nt (start:1679308, end:1679287) A=152036 nt (start:7823, end:7802) CALCULATED DISTANCE APART: -1667131 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.74 -> -1813153 <- tig#17, B=238371 nt (start:59096, end:59075) A=1959065 nt (start:1774057, end:1774036) CALCULATED DISTANCE APART: -1813153 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12476, end:12455) A=91302 nt (start:11717, end:11696) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTAAGAAAAGGGATATTTTGA - TTTATAGAAAAATGTGAGATC) on contig 19 (3531543 nt) Astart:3059356 Aend:3059335 Bstart:3049367 Bend:3049346 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16955, end:16934) A=1227811 nt (start:6860, end:6839) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260917, end:2260938) B=356404 nt (start:342307, end:342328) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#81 -> -2917594 <- tig#r.7, A=258617 nt (start:239765, end:239786) B=3534247 nt (start:615505, end:615526) CALCULATED DISTANCE APART: -2917594 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#433 -> -944078 <- tig#r.29, A=1238 nt (start:731, end:752) B=1463708 nt (start:500137, end:500158) CALCULATED DISTANCE APART: -944078 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#19 -> -3044633 <- tig#r.72, A=3531543 nt (start:471426, end:471447) B=172011 nt (start:167495, end:167516) CALCULATED DISTANCE APART: -3044633 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460329, end:460308) A=1345436 nt (start:25331, end:25310) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig. Pair (AATATTTGCCGACAAAGTTGG - ATATGGAAAGAAATTGTACGA) on contig 37 (853709 nt) Astart:838784 Aend:838763 Bstart:823279 Bend:823300 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#57 -> -4506482 <- tig#r.11, A=258385 nt (start:256001, end:256022) B=4628067 nt (start:103969, end:103990) CALCULATED DISTANCE APART: -4506482 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.34 -> -1667131 <- tig#93, B=1705564 nt (start:1679303, end:1679282) A=152036 nt (start:7828, end:7807) CALCULATED DISTANCE APART: -1667131 < -2000 Pairs unsatisfied in distance within a contig. Pair (GAACTTTTTTTGTGATCACTC - GCGGTATTGGTAAAACCACTC) on contig 37 (853709 nt) Astart:538977 Aend:538998 Bstart:551647 Bend:551626 CALCULATED DISTANCE APART: 12670 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#10 -> -2837213 <- tig#45, B=3047199 nt (start:393014, end:393035) A=528133 nt (start:203028, end:203007) CALCULATED DISTANCE APART: -2837213 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#64 -> -210549 <- tig#109, B=211265 nt (start:822, end:843) A=66564 nt (start:20106, end:20085) CALCULATED DISTANCE APART: -210549 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.17 -> -4235404 <- tig#3, B=1959065 nt (start:1446471, end:1446450) A=3889482 nt (start:2808933, end:2808912) CALCULATED DISTANCE APART: -4235404 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -2188131 <- tig#r.15, A=2650694 nt (start:2066460, end:2066481) B=3712591 nt (start:2088694, end:2088715) CALCULATED DISTANCE APART: -2188131 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -621133 <- tig#r.66, A=2766197 nt (start:2129318, end:2129339) B=201913 nt (start:197659, end:197680) CALCULATED DISTANCE APART: -621133 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260587, end:2260608) B=356404 nt (start:342637, end:342658) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#31 -> -496426 <- tig#41, B=976128 nt (start:946435, end:946456) A=667251 nt (start:486733, end:486712) CALCULATED DISTANCE APART: -496426 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#95 -> -16960 <- tig#54, B=92653 nt (start:92098, end:92119) A=625914 nt (start:36405, end:36384) CALCULATED DISTANCE APART: -16960 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATATATAGTAAAATATGATGT - TATACTCGGCGATGAGTCGAG) on contig 19 (3531543 nt) Astart:3060381 Aend:3060360 Bstart:3048342 Bend:3048321 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#64 -> -210549 <- tig#109, B=211265 nt (start:417, end:438) A=66564 nt (start:19701, end:19680) CALCULATED DISTANCE APART: -210549 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135458, end:135479) B=15068 nt (start:2218, end:2239) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282347, end:282368) B=2196 nt (start:528, end:507) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GCACCACTCTCACTTGTTCAC - CTTGCGGCGTCCACCGTGGGT) on contig 15 (3712591 nt) Astart:1718433 Aend:1718454 Bstart:1729585 Bend:1729606 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#26 -> -90650 <- tig#95, B=1332708 nt (start:1310593, end:1310614) A=92653 nt (start:88535, end:88514) CALCULATED DISTANCE APART: -90650 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -1443756 <- tig#r.4, A=2650694 nt (start:2066473, end:2066494) B=3837743 nt (start:2958208, end:2958229) CALCULATED DISTANCE APART: -1443756 < -2000 Pairs unsatisfied in distance within a contig. Pair (GTTTCTATTGGGCCTCTGAGA - AGCAACGTCGACAATTCAATA) on contig 15 (3712591 nt) Astart:2103261 Aend:2103240 Bstart:2056447 Bend:2056468 CALCULATED DISTANCE APART: 46814 Pairs unsatisfied in pairing logic within a contig. Pair (TAACCTGTCTGTTCAGAGAGC - AAACTTTACAAACTCTTTTCT) on contig 14 (2271162 nt) Astart:656918 Aend:656939 Bstart:457241 Bend:457262 Pairs unsatisfied in pairing logic within a contig. Pair (TTCCACTTTTCAAGTGTTTGT - CAACTCATGGACAGGCCAAGA) on contig 7 (3534247 nt) Astart:2255837 Aend:2255816 Bstart:2238942 Bend:2238921 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219341, end:4219320) A=2598 nt (start:2280, end:2259) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#433 -> -944078 <- tig#r.29, A=1238 nt (start:741, end:762) B=1463708 nt (start:500127, end:500148) CALCULATED DISTANCE APART: -944078 < -2000 Pairs unsatisfied in distance within a contig. Pair (ACAACCTGTATGCAACACACA - TTATATGTTTTGGAAGTGTAT) on contig 10 (3047199 nt) Astart:790149 Aend:790128 Bstart:766409 Bend:766430 CALCULATED DISTANCE APART: 23740 Pairs unsatisfied in distance within a contig. Pair (AAAAAGTATCACATGCCAAGT - ACATTTGGGCCAGTTTGTTGT) on contig 118 (66247 nt) Astart:250 Aend:271 Bstart:6695 Bend:6674 CALCULATED DISTANCE APART: 6445 Pairs unsatisfied in pairing logic within a contig. Pair (GTGGGTTAAAAATCATGATTA - CGAACCTATATAAGCTATATG) on contig 15 (3712591 nt) Astart:1719108 Aend:1719129 Bstart:1728910 Bend:1728931 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#67 -> -1122910 <- tig#r.43, A=197815 nt (start:64210, end:64231) B=1235946 nt (start:226641, end:226662) CALCULATED DISTANCE APART: -1122910 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#9 -> -5152916 <- tig#r.12, A=3747885 nt (start:435448, end:435469) B=2766197 nt (start:905718, end:905739) CALCULATED DISTANCE APART: -5152916 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#57 -> -4506482 <- tig#r.11, A=258385 nt (start:255836, end:255857) B=4628067 nt (start:104134, end:104155) CALCULATED DISTANCE APART: -4506482 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#433 -> -944078 <- tig#r.29, A=1238 nt (start:321, end:342) B=1463708 nt (start:500547, end:500568) CALCULATED DISTANCE APART: -944078 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAAGCGTGAGACAAGATTTTG - AACAACTTGCAAAGAAGCAAG) on contig 15 (3712591 nt) Astart:3352527 Aend:3352548 Bstart:3377513 Bend:3377492 CALCULATED DISTANCE APART: 24986 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259157, end:2259178) B=356404 nt (start:344067, end:344088) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AAGTAACAGATGGCGAGGAAG - AGAGTTCCTAGATCCCATGAA) on contig 33 (1290487 nt) Astart:109047 Aend:109068 Bstart:244554 Bend:244575 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#33 -> -492044 <- tig#32, A=1290487 nt (start:1235542, end:1235563) B=972151 nt (start:457099, end:457078) CALCULATED DISTANCE APART: -492044 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.28 -> -4041595 <- tig#8, B=1171658 nt (start:690056, end:690035) A=5070776 nt (start:3371539, end:3371518) CALCULATED DISTANCE APART: -4041595 < -2000 Pairs unsatisfied in distance within a contig. Pair (AATTTGAAGATGAATTTGAGC - ACTGCATTGATAATTAGAGTA) on contig 2 (5014909 nt) Astart:1268471 Aend:1268492 Bstart:1283133 Bend:1283112 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#38 -> -1110027 <- tig#78, B=1143067 nt (start:142946, end:142967) A=184063 nt (start:129906, end:129885) CALCULATED DISTANCE APART: -1110027 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4186279, end:4186258) A=3712591 nt (start:282, end:261) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10363, end:10342) A=2766197 nt (start:2151200, end:2151179) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728053, end:728074) A=1096 nt (start:138, end:117) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTAAATATGTTTTCGAAAAAA - ATATATCTTAAGATTATAAGA) on contig 19 (3531543 nt) Astart:3058498 Aend:3058477 Bstart:3050222 Bend:3050201 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#11 -> -4878197 <- tig#29, A=4628067 nt (start:684609, end:684630) B=1463708 nt (start:954739, end:954718) CALCULATED DISTANCE APART: -4878197 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259402, end:2259423) B=356404 nt (start:343822, end:343843) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.38 -> -1310006 <- tig#33, B=1143067 nt (start:1039249, end:1039228) A=1290487 nt (start:290757, end:290736) CALCULATED DISTANCE APART: -1310006 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#114 -> -17609 <- tig#167, A=54818 nt (start:17417, end:17438) B=25236 nt (start:208, end:187) CALCULATED DISTANCE APART: -17609 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#114 -> -356711 <- tig#r.12, A=54818 nt (start:17417, end:17438) B=2766197 nt (start:2426887, end:2426908) CALCULATED DISTANCE APART: -356711 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#114 -> -1696705 <- tig#34, A=54818 nt (start:17417, end:17438) B=1705564 nt (start:1679304, end:1679283) CALCULATED DISTANCE APART: -1696705 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459129, end:459108) A=1345436 nt (start:26531, end:26510) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -1256268 <- tig#r.25, A=262460 nt (start:205892, end:205913) B=1290536 nt (start:70836, end:70857) CALCULATED DISTANCE APART: -1256268 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AATCCCACCGACCAAACGCAG - TTTATCTAATTTCCTCTTTTT) on contig 15 (3712591 nt) Astart:1716658 Aend:1716679 Bstart:1731360 Bend:1731381 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#81 -> -2917600 <- tig#r.7, A=258617 nt (start:239255, end:239276) B=3534247 nt (start:616009, end:616030) CALCULATED DISTANCE APART: -2917600 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259472, end:2259493) B=356404 nt (start:343752, end:343773) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CTCTTCGGGCTGAGGTTGATT - TCACATATACAACAACCACAG) on contig 14 (2271162 nt) Astart:1848936 Aend:1848915 Bstart:2003814 Bend:2003793 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12521, end:12500) A=91302 nt (start:11672, end:11651) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig. Pair (CGAATACCATGCCATTTCTTT - TGTATTAGCTTGTGATATTGT) on contig 37 (853709 nt) Astart:537757 Aend:537778 Bstart:550427 Bend:550406 CALCULATED DISTANCE APART: 12670 Pairs unsatisfied in pairing logic within a contig. Pair (GACTCGGTGGCGGTCAATGCT - ATCAAAATTACTTTATATATC) on contig 15 (3712591 nt) Astart:1718783 Aend:1718804 Bstart:1729235 Bend:1729256 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728383, end:728404) A=1096 nt (start:468, end:447) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#10 -> -2964281 <- tig#103, B=3047199 nt (start:261645, end:261666) A=211876 nt (start:198727, end:198706) CALCULATED DISTANCE APART: -2964281 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.257 -> -2902765 <- tig#8, B=1995 nt (start:1106, end:1085) A=5070776 nt (start:2921659, end:2921638) CALCULATED DISTANCE APART: -2902765 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATTAGGTTAAGAATTCAGTAG - TCATAGGTAATAGGTTCGATG) on contig 15 (3712591 nt) Astart:1719083 Aend:1719104 Bstart:1728935 Bend:1728956 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728818, end:728839) A=1096 nt (start:903, end:882) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.38 -> -1426764 <- tig#29, B=1143067 nt (start:1039849, end:1039828) A=1463708 nt (start:406915, end:406894) CALCULATED DISTANCE APART: -1426764 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#19 -> -1832843 <- tig#r.56, A=3531543 nt (start:1923453, end:1923474) B=262460 nt (start:17707, end:17728) CALCULATED DISTANCE APART: -1832843 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#52 -> -356009 <- tig#3, B=356404 nt (start:127, end:148) A=3889482 nt (start:19732, end:19711) CALCULATED DISTANCE APART: -356009 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#53 -> -24524 <- tig#2, B=354284 nt (start:340639, end:340660) A=5014909 nt (start:30879, end:30858) CALCULATED DISTANCE APART: -24524 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33704, end:33683) A=855454 nt (start:18745, end:18724) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:283057, end:283078) B=2196 nt (start:1238, end:1217) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGTATCATACTATATTTGATC - ATCCGAGCTTAGGGCGCGGAG) on contig 174 (11297 nt) Astart:10280 Aend:10259 Bstart:5476 Bend:5497 CALCULATED DISTANCE APART: 4804 Pairs unsatisfied in distance within a contig. Pair (AGCGTTGTCTGTTGGTGCTAA - TTGATAAATGCATCCCTGCAG) on contig 37 (853709 nt) Astart:839184 Aend:839163 Bstart:823679 Bend:823700 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in pairing logic within a contig. Pair (ATATAACTGGAGAACAAGATA - TAATGAGAACTTGGAGGGTTC) on contig 15 (3712591 nt) Astart:1717888 Aend:1717909 Bstart:1730130 Bend:1730151 Pairs unsatisfied in distance within a contig. Pair (TGGCTCTATCTTTCCAAATCA - AGAAGCATTTATGTACTATTT) on contig 6 (6870868 nt) Astart:1138199 Aend:1138178 Bstart:1129772 Bend:1129793 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#7 -> -3853079 <- tig#36, A=3534247 nt (start:146014, end:146035) B=855454 nt (start:484846, end:484825) CALCULATED DISTANCE APART: -3853079 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.34 -> -1667664 <- tig#93, B=1705564 nt (start:1679301, end:1679280) A=152036 nt (start:8363, end:8342) CALCULATED DISTANCE APART: -1667664 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGAAACATAAACCGCAGAAAC - TATGAGTTATGACCCACTCTT) on contig 15 (3712591 nt) Astart:1716683 Aend:1716704 Bstart:1731335 Bend:1731356 Pairs unsatisfied in pairing logic within a contig. Pair (ATGCTTCGGCTACAGCGGAGA - CCACTCAAAGGTAACATAATC) on contig 15 (3712591 nt) Astart:1718703 Aend:1718724 Bstart:1729315 Bend:1729336 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#36 -> -155616 <- tig#r.43, A=855454 nt (start:790615, end:790636) B=1235946 nt (start:1125169, end:1125190) CALCULATED DISTANCE APART: -155616 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135153, end:135174) B=15068 nt (start:2523, end:2544) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#4 -> -4036387 <- tig#8, B=3837743 nt (start:690688, end:690709) A=5070776 nt (start:909332, end:909311) CALCULATED DISTANCE APART: -4036387 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#19 -> -1985783 <- tig#16, B=3531543 nt (start:2254200, end:2254221) A=2098954 nt (start:728440, end:728419) CALCULATED DISTANCE APART: -1985783 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185779, end:4185758) A=3712591 nt (start:782, end:761) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#46 -> -3144173 <- tig#12, B=577887 nt (start:138523, end:138544) A=2766197 nt (start:2724809, end:2724788) CALCULATED DISTANCE APART: -3144173 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730057, end:730078) B=3531543 nt (start:3199631, end:3199610) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CAAACACTAACCTTAGGTTCG - GCACACGAGATTTTTAACGGT) on contig 15 (3712591 nt) Astart:1791729 Aend:1791708 Bstart:2055782 Bend:2055803 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#28 -> -913193 <- tig#475, A=1171658 nt (start:238655, end:238676) B=1157 nt (start:190, end:169) CALCULATED DISTANCE APART: -913193 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -40662 <- tig#443, A=736718 nt (start:676506, end:676527) B=1213 nt (start:450, end:429) CALCULATED DISTANCE APART: -40662 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.1 -> -4590180 <- tig#16, B=4853111 nt (start:3208487, end:3208466) A=2098954 nt (start:1401693, end:1401672) CALCULATED DISTANCE APART: -4590180 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTCATAGAAAGACAGTCATCT - AATTTTTATGGATCTAATGTC) on contig 5 (3689108 nt) Astart:1169327 Aend:1169348 Bstart:1184462 Bend:1184441 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#120 -> -1341554 <- tig#29, B=44710 nt (start:43882, end:43903) A=1463708 nt (start:1360726, end:1360705) CALCULATED DISTANCE APART: -1341554 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.34 -> -1666242 <- tig#93, B=1705564 nt (start:1679309, end:1679288) A=152036 nt (start:6933, end:6912) CALCULATED DISTANCE APART: -1666242 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282837, end:282858) B=2196 nt (start:1018, end:997) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TCAACTAGATTGCGTTTGATA - CATATAAGGCAGCAAGGGTAA) on contig 19 (3531543 nt) Astart:3058253 Aend:3058232 Bstart:3050467 Bend:3050446 Pairs unsatisfied in distance within a contig. Pair (GGACTAATAATACCAATTTGT - TAGAAAGATGAGAACTTTTTT) on contig 34 (1705564 nt) Astart:679659 Aend:679638 Bstart:664696 Bend:664717 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33614, end:33593) A=855454 nt (start:18835, end:18814) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#47 -> -293197 <- tig#6, A=471458 nt (start:171884, end:171905) B=6870868 nt (start:13623, end:13602) CALCULATED DISTANCE APART: -293197 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -40662 <- tig#443, A=736718 nt (start:676856, end:676877) B=1213 nt (start:800, end:779) CALCULATED DISTANCE APART: -40662 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#57 -> -4506482 <- tig#r.11, A=258385 nt (start:255851, end:255872) B=4628067 nt (start:104119, end:104140) CALCULATED DISTANCE APART: -4506482 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.409 -> -1019852 <- tig#23, B=1303 nt (start:876, end:855) A=1345436 nt (start:1038976, end:1038955) CALCULATED DISTANCE APART: -1019852 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728603, end:728624) A=1096 nt (start:688, end:667) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260092, end:2260113) B=356404 nt (start:343132, end:343153) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.41 -> -954030 <- tig#17, B=667251 nt (start:483481, end:483460) A=1959065 nt (start:490549, end:490528) CALCULATED DISTANCE APART: -954030 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#47 -> -347211 <- tig#53, B=471458 nt (start:285513, end:285534) A=354284 nt (start:181266, end:181245) CALCULATED DISTANCE APART: -347211 < -2000 Pairs unsatisfied in distance within a contig. Pair (TATCTTGGTCACGAAAAACAG - TATTTGTTACTTGAACGTGGT) on contig 5 (3689108 nt) Astart:1170187 Aend:1170208 Bstart:1185322 Bend:1185301 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig. Pair (AAACTCTTCCCTCTTGATGAC - TGAAAGAAGAAGGTGTAACTT) on contig 15 (3712591 nt) Astart:3352292 Aend:3352313 Bstart:3377278 Bend:3377257 CALCULATED DISTANCE APART: 24986 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#103 -> -259849 <- tig#r.48, A=211876 nt (start:14499, end:14520) B=487359 nt (start:404887, end:404908) CALCULATED DISTANCE APART: -259849 < -2000 Pairs unsatisfied in distance within a contig. Pair (CCGCTGACGCCCATGTCTTCC - AAGTAATTGAATGTTAAAGAC) on contig 2 (5014909 nt) Astart:135959 Aend:135980 Bstart:195679 Bend:195658 CALCULATED DISTANCE APART: 59720 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460089, end:460068) A=1345436 nt (start:25571, end:25550) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136603, end:136624) B=15068 nt (start:1073, end:1094) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.101 -> -46827 <- tig#107, B=84691 nt (start:23989, end:23968) A=68734 nt (start:42838, end:42817) CALCULATED DISTANCE APART: -46827 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTAGCAGCAAAATGATTGAAA - CAGTGATTAGGTATGGTTTAT) on contig 15 (3712591 nt) Astart:3352467 Aend:3352488 Bstart:3377453 Bend:3377432 CALCULATED DISTANCE APART: 24986 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#127 -> -717436 <- tig#r.33, A=80830 nt (start:20191, end:20212) B=1290487 nt (start:613690, end:613711) CALCULATED DISTANCE APART: -717436 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#6 -> -6284042 <- tig#42, A=6870868 nt (start:994772, end:994793) B=659641 nt (start:427946, end:427925) CALCULATED DISTANCE APART: -6284042 < -2000 Pairs unsatisfied in distance within a contig. Pair (GCCGAATGATTACCTTTTGCT - TAAGTCAGTCTTGAGAAAGTA) on contig 15 (3712591 nt) Astart:3350370 Aend:3350391 Bstart:3375358 Bend:3375337 CALCULATED DISTANCE APART: 24988 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.101 -> -46827 <- tig#107, B=84691 nt (start:24049, end:24028) A=68734 nt (start:42778, end:42757) CALCULATED DISTANCE APART: -46827 < -2000 Pairs unsatisfied in distance within a contig. Pair (TACAATGTTAATGGTTTAAAG - TAAGTTTCTTAGTCACTTTTG) on contig 30 (1050452 nt) Astart:649609 Aend:649630 Bstart:665375 Bend:665354 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -621133 <- tig#r.66, A=2766197 nt (start:2129693, end:2129714) B=201913 nt (start:197284, end:197305) CALCULATED DISTANCE APART: -621133 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAATAGCCAAGAGAATGTTCG - GTTAAGCTTTGACTAAAAGAT) on contig 14 (2271162 nt) Astart:1537981 Aend:1538002 Bstart:2003474 Bend:2003453 CALCULATED DISTANCE APART: 465493 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.6 -> -4769564 <- tig#49, B=6870868 nt (start:4746014, end:4745993) A=399963 nt (start:43550, end:43529) CALCULATED DISTANCE APART: -4769564 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#37 -> -738300 <- tig#r.53, A=853709 nt (start:108314, end:108335) B=354284 nt (start:341379, end:341400) CALCULATED DISTANCE APART: -738300 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3583 <- tig#26, B=1171658 nt (start:1171378, end:1171399) A=1332708 nt (start:23303, end:23282) CALCULATED DISTANCE APART: -3583 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185959, end:4185938) A=3712591 nt (start:602, end:581) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#92 -> -2121554 <- tig#16, A=101136 nt (start:3321, end:3342) B=2098954 nt (start:2043739, end:2043718) CALCULATED DISTANCE APART: -2121554 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136073, end:136094) B=15068 nt (start:1603, end:1624) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082437, end:2082458) B=976128 nt (start:961085, end:961106) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.409 -> -1019852 <- tig#23, B=1303 nt (start:611, end:590) A=1345436 nt (start:1039241, end:1039220) CALCULATED DISTANCE APART: -1019852 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GGCAGAGTGATATAATTGCTA - AATCAACGATGATTTTAACAA) on contig 15 (3712591 nt) Astart:1719258 Aend:1719279 Bstart:1728760 Bend:1728781 Pairs unsatisfied in pairing logic within a contig. Pair (AGCCGGGCAGAATCAAAAGGA - AGGCAATGGGAGAGCAGAACA) on contig 9 (3747885 nt) Astart:2849159 Aend:2849180 Bstart:2856682 Bend:2856703 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33889, end:33868) A=855454 nt (start:18560, end:18539) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#98 -> -265984 <- tig#r.6, A=88184 nt (start:16449, end:16470) B=6870868 nt (start:6656619, end:6656640) CALCULATED DISTANCE APART: -265984 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCTGCAAAGTGATTGATGAAT - ATTCTTGCTCTACCCTCACGA) on contig 1 (4853111 nt) Astart:346495 Aend:346516 Bstart:391772 Bend:391751 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#104 -> -110281 <- tig#41, B=97911 nt (start:56918, end:56939) A=667251 nt (start:89288, end:89267) CALCULATED DISTANCE APART: -110281 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#46 -> -3144174 <- tig#12, B=577887 nt (start:138212, end:138233) A=2766197 nt (start:2724499, end:2724478) CALCULATED DISTANCE APART: -3144174 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728338, end:728359) A=1096 nt (start:423, end:402) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17370, end:17349) A=1227811 nt (start:6445, end:6424) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10613, end:10592) A=2766197 nt (start:2150950, end:2150929) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTCTATTTTCTTATAAACAAT - CTCTTTATCAATCTATGGAGT) on contig 34 (1705564 nt) Astart:679624 Aend:679603 Bstart:664661 Bend:664682 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#2 -> -2035534 <- tig#118, A=5014909 nt (start:2966125, end:2966146) B=66247 nt (start:6750, end:6729) CALCULATED DISTANCE APART: -2035534 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#52 -> -355614 <- tig#3, B=356404 nt (start:112, end:133) A=3889482 nt (start:19322, end:19301) CALCULATED DISTANCE APART: -355614 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#48 -> -585449 <- tig#46, A=487359 nt (start:42068, end:42089) B=577887 nt (start:160158, end:160137) CALCULATED DISTANCE APART: -585449 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3583 <- tig#26, B=1171658 nt (start:1171298, end:1171319) A=1332708 nt (start:23223, end:23202) CALCULATED DISTANCE APART: -3583 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#29 -> -579824 <- tig#28, A=1463708 nt (start:1144440, end:1144461) B=1171658 nt (start:280556, end:280535) CALCULATED DISTANCE APART: -579824 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -58420 <- tig#125, A=354284 nt (start:325781, end:325802) B=54013 nt (start:49917, end:49896) CALCULATED DISTANCE APART: -58420 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATGAAGGTTTTCTTGAATACC - CATTTACTATAAATGAAGAAA) on contig 2 (5014909 nt) Astart:1269261 Aend:1269282 Bstart:1283923 Bend:1283902 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#81 -> -2917512 <- tig#r.7, A=258617 nt (start:240979, end:241000) B=3534247 nt (start:614373, end:614394) CALCULATED DISTANCE APART: -2917512 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730242, end:730263) B=3531543 nt (start:3199816, end:3199795) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#33 -> -492044 <- tig#32, A=1290487 nt (start:1235582, end:1235603) B=972151 nt (start:457139, end:457118) CALCULATED DISTANCE APART: -492044 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#74 -> -453293 <- tig#r.47, A=238371 nt (start:73323, end:73344) B=471458 nt (start:163213, end:163234) CALCULATED DISTANCE APART: -453293 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135298, end:135319) B=15068 nt (start:2378, end:2399) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig. Pair (CAAATTTTACATTTAATTTTT - ACAATGGAGACAAGCCTGTTG) on contig 6 (6870868 nt) Astart:1138044 Aend:1138023 Bstart:1129617 Bend:1129638 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig. Pair (GGTTGAGTTTTATCTTTTATT - GCCTATTGCCTTTTTCAGTGA) on contig 30 (1050452 nt) Astart:650504 Aend:650525 Bstart:666270 Bend:666249 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219426, end:4219405) A=2598 nt (start:2195, end:2174) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2900, end:2921) A=258385 nt (start:1436, end:1415) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728918, end:728939) A=1096 nt (start:1003, end:982) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459039, end:459018) A=1345436 nt (start:26621, end:26600) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#119 -> -7707 <- tig#r.49, A=46878 nt (start:32010, end:32031) B=399963 nt (start:387124, end:387145) CALCULATED DISTANCE APART: -7707 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GTCGAGTGGGTTAAAAATCAT - CTATATAAGCTATATGCTATT) on contig 15 (3712591 nt) Astart:1719103 Aend:1719124 Bstart:1728915 Bend:1728936 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2935, end:2956) A=258385 nt (start:1471, end:1450) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#265 -> -3126344 <- tig#4, A=1946 nt (start:1681, end:1702) B=3837743 nt (start:3146079, end:3146058) CALCULATED DISTANCE APART: -3126344 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460444, end:460423) A=1345436 nt (start:25216, end:25195) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATAGGCCTGCAAAACCTGTAA - AAAGCAAAATACCCAGCGAGT) on contig 15 (3712591 nt) Astart:3349980 Aend:3350001 Bstart:3374968 Bend:3374947 CALCULATED DISTANCE APART: 24988 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.7 -> -2502325 <- tig#58, B=3534247 nt (start:2417214, end:2417193) A=374416 nt (start:105111, end:105090) CALCULATED DISTANCE APART: -2502325 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GAGCAGAAGCCAGATTCTACA - CTTCGTATGATAACAGCAATT) on contig 4 (3837743 nt) Astart:761732 Aend:761753 Bstart:351225 Bend:351246 Pairs unsatisfied in pairing logic within a contig. Pair (AACAAGGATACACTACTTAGG - TCTTCTAACAAGGATACACTA) on contig 53 (354284 nt) Astart:325798 Aend:325777 Bstart:325804 Bend:325783 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#414 -> -168815 <- tig#48, B=1291 nt (start:746, end:767) A=487359 nt (start:188270, end:188249) CALCULATED DISTANCE APART: -168815 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TAAGGCTTTTTTTTTCCTTTT - ATTGTATGAAATTCAATGTTT) on contig 15 (3712591 nt) Astart:1717348 Aend:1717369 Bstart:1730670 Bend:1730691 Pairs unsatisfied in distance within a contig. Pair (AAAATTTGAATCTGTGCATGA - TTCTTTAACACTCTGCTCCAC) on contig 2 (5014909 nt) Astart:1269866 Aend:1269887 Bstart:1284528 Bend:1284507 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#79 -> -614150 <- tig#r.2, A=136600 nt (start:76402, end:76423) B=5014909 nt (start:4440957, end:4440978) CALCULATED DISTANCE APART: -614150 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CTTTGATGAACTCTTCAAAAA - CTTGACATGTTATGATGGCAC) on contig 4 (3837743 nt) Astart:2358496 Aend:2358517 Bstart:2359566 Bend:2359587 Pairs unsatisfied in distance within a contig. Pair (TATCAATGAGAGGTCGAGCAA - GTATTCATGAATGTTAAGCTT) on contig 2 (5014909 nt) Astart:1269041 Aend:1269062 Bstart:1283703 Bend:1283682 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig. Pair (AGAAAGACAGTCATCTTATTT - CTCCAAATTTTTATGGATCTA) on contig 5 (3689108 nt) Astart:1169332 Aend:1169353 Bstart:1184467 Bend:1184446 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in pairing logic within a contig. Pair (ATAGAGCTGATCACTCACCAG - TTCAAGTTTTATTTTGTGTTG) on contig 15 (3712591 nt) Astart:1716923 Aend:1716944 Bstart:1731095 Bend:1731116 Pairs unsatisfied in distance within a contig. Pair (ACTTCAGTCACAAGCGAAGAA - AGAACAAAATAAAAATAAGAC) on contig 5 (3689108 nt) Astart:1178542 Aend:1178521 Bstart:1163408 Bend:1163429 CALCULATED DISTANCE APART: 15134 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -4201 <- tig#r.96, A=262460 nt (start:244426, end:244447) B=91302 nt (start:85135, end:85156) CALCULATED DISTANCE APART: -4201 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTGACCAGTAAATGTAACATT - GGAAACTTTACTATCATCAAT) on contig 15 (3712591 nt) Astart:1719173 Aend:1719194 Bstart:1728845 Bend:1728866 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#81 -> -2930095 <- tig#r.7, A=258617 nt (start:241369, end:241390) B=3534247 nt (start:601400, end:601421) CALCULATED DISTANCE APART: -2930095 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGCAAGAAAAAAAATATGATG - TTTTGAGAATGTGACAGCGCT) on contig 27 (1227811 nt) Astart:434540 Aend:434561 Bstart:450793 Bend:450772 CALCULATED DISTANCE APART: 16253 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -1335762 <- tig#4, B=3747885 nt (start:2857367, end:2857388) A=3837743 nt (start:465244, end:465223) CALCULATED DISTANCE APART: -1335762 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082657, end:2082678) B=976128 nt (start:960865, end:960886) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTCATGTCTATGTTTGTTTCA - TATAACTATAATATATATTCT) on contig 19 (3531543 nt) Astart:3060336 Aend:3060315 Bstart:3048387 Bend:3048366 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#25 -> -666259 <- tig#2, B=1290536 nt (start:852762, end:852783) A=5014909 nt (start:248485, end:248464) CALCULATED DISTANCE APART: -666259 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3583 <- tig#26, B=1171658 nt (start:1171283, end:1171304) A=1332708 nt (start:23208, end:23187) CALCULATED DISTANCE APART: -3583 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ACTAACCTTAGGTTCGGTGAT - AACTTGCACACGAGATTTTTA) on contig 15 (3712591 nt) Astart:1791724 Aend:1791703 Bstart:2055777 Bend:2055798 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#305 -> -2202335 <- tig#r.19, A=1638 nt (start:297, end:318) B=3531543 nt (start:1310549, end:1310570) CALCULATED DISTANCE APART: -2202335 < -2000 Pairs unsatisfied in distance within a contig. Pair (TAAACCGAATACCATGCCATT - TAGCTTGTGATATTGTGCAGA) on contig 37 (853709 nt) Astart:537752 Aend:537773 Bstart:550422 Bend:550401 CALCULATED DISTANCE APART: 12670 Pairs unsatisfied in pairing logic within a contig. Pair (AAAAATCTTTGAAAGAAATGG - AGTACTATTGAGTCGCTCGAA) on contig 19 (3531543 nt) Astart:3060241 Aend:3060220 Bstart:3048482 Bend:3048461 Pairs unsatisfied in distance within a contig. Pair (GATCAAGAAAGCAGAATCTTG - TCTTGCTGTACGGGAACCAGA) on contig 6 (6870868 nt) Astart:1137824 Aend:1137803 Bstart:1129397 Bend:1129418 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136313, end:136334) B=15068 nt (start:1363, end:1384) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460509, end:460488) A=1345436 nt (start:25151, end:25130) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig. Pair (CAACAAGCATCACAGAGAAAA - TTTGGATCTGGCTTGCTTTCA) on contig 29 (1463708 nt) Astart:122922 Aend:122901 Bstart:100855 Bend:100876 CALCULATED DISTANCE APART: 22067 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.65 -> -1064428 <- tig#32, B=286124 nt (start:177451, end:177430) A=972151 nt (start:906977, end:906956) CALCULATED DISTANCE APART: -1064428 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135078, end:135099) B=15068 nt (start:2598, end:2619) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig. Pair (ACATATTGGCGTCTCAGGCAA - ACACATGAAACATGATGTTGA) on contig 30 (1050452 nt) Astart:649934 Aend:649955 Bstart:665700 Bend:665679 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219331, end:4219310) A=2598 nt (start:2290, end:2269) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728043, end:728064) A=1096 nt (start:128, end:107) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#37 -> -738300 <- tig#r.53, A=853709 nt (start:108299, end:108320) B=354284 nt (start:341394, end:341415) CALCULATED DISTANCE APART: -738300 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#10 -> -2925308 <- tig#9, B=3047199 nt (start:251214, end:251235) A=3747885 nt (start:149323, end:149302) CALCULATED DISTANCE APART: -2925308 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CAAAAGATATACAATTAACGA - AAAATTCTATATATTATTAGT) on contig 19 (3531543 nt) Astart:3059213 Aend:3059192 Bstart:3049507 Bend:3049486 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#6 -> -40186 <- tig#91, A=6870868 nt (start:6827487, end:6827508) B=101959 nt (start:16805, end:16784) CALCULATED DISTANCE APART: -40186 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282042, end:282063) B=2196 nt (start:223, end:202) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#64 -> -210568 <- tig#109, B=211265 nt (start:133, end:154) A=66564 nt (start:19436, end:19415) CALCULATED DISTANCE APART: -210568 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#28 -> -1077900 <- tig#18, A=1171658 nt (start:256566, end:256587) B=1738864 nt (start:182808, end:182787) CALCULATED DISTANCE APART: -1077900 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.6 -> -1021234 <- tig#25, B=6870868 nt (start:12283, end:12262) A=1290536 nt (start:1028951, end:1028930) CALCULATED DISTANCE APART: -1021234 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260737, end:2260758) B=356404 nt (start:342487, end:342508) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#5 -> -6078547 <- tig#r.2, A=3689108 nt (start:498384, end:498405) B=5014909 nt (start:2107086, end:2107107) CALCULATED DISTANCE APART: -6078547 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#40 -> -2348094 <- tig#7, B=668174 nt (start:554942, end:554963) A=3534247 nt (start:2254862, end:2254841) CALCULATED DISTANCE APART: -2348094 < -2000 Pairs unsatisfied in distance within a contig. Pair (GAATCGTCAATATCCATCCAA - TGGTTTTCTCATTTAATCTAC) on contig 34 (1705564 nt) Astart:679389 Aend:679368 Bstart:664426 Bend:664447 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -621133 <- tig#r.66, A=2766197 nt (start:2129373, end:2129394) B=201913 nt (start:197604, end:197625) CALCULATED DISTANCE APART: -621133 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTCTCAAAGCTTTCATGTTGT - TTTCCTTGTTAGAAGACACAA) on contig 167 (25236 nt) Astart:25189 Aend:25168 Bstart:10193 Bend:10214 CALCULATED DISTANCE APART: 14996 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460104, end:460083) A=1345436 nt (start:25556, end:25535) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAGGTAACAGAGTAGTTCCCT - GTACATACATGAAGCACTTTT) on contig 37 (853709 nt) Astart:538667 Aend:538688 Bstart:551337 Bend:551316 CALCULATED DISTANCE APART: 12670 Pairs unsatisfied in distance within a contig. Pair (GGTTTTGGAAAGCGTTGTCTG - CATCCCTGCAGGAACCAAATA) on contig 37 (853709 nt) Astart:839194 Aend:839173 Bstart:823689 Bend:823710 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.35 -> -676591 <- tig#2, B=1135475 nt (start:599400, end:599379) A=5014909 nt (start:97191, end:97170) CALCULATED DISTANCE APART: -676591 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33729, end:33708) A=855454 nt (start:18720, end:18699) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATTGACAGAGAAATGCATCTC - ATTGATTAAAAAAAACCTTAA) on contig 30 (1050452 nt) Astart:649474 Aend:649495 Bstart:665240 Bend:665219 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.403 -> -2330792 <- tig#13, B=1321 nt (start:950, end:929) A=2650694 nt (start:2349842, end:2349821) CALCULATED DISTANCE APART: -2330792 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#127 -> -57440 <- tig#17, B=80830 nt (start:63210, end:63231) A=1959065 nt (start:59820, end:59799) CALCULATED DISTANCE APART: -57440 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460124, end:460103) A=1345436 nt (start:25536, end:25515) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#64 -> -210549 <- tig#109, B=211265 nt (start:782, end:803) A=66564 nt (start:20066, end:20045) CALCULATED DISTANCE APART: -210549 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTCGTGGAAACTATTTTGAAA - AGTTTCTGGGAAGAGAGGTAA) on contig 6 (6870868 nt) Astart:1138779 Aend:1138758 Bstart:1130324 Bend:1130345 CALCULATED DISTANCE APART: 8455 Pairs unsatisfied in pairing logic within a contig. Pair (GAAGGGTCAAGAGTCCATGAT - AGAGAGTTGATGTGGTTGAGA) on contig 15 (3712591 nt) Astart:1716778 Aend:1716799 Bstart:1731240 Bend:1731261 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.1 -> -6838870 <- tig#7, B=4853111 nt (start:4396877, end:4396856) A=3534247 nt (start:2461993, end:2461972) CALCULATED DISTANCE APART: -6838870 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#63 -> -108086 <- tig#23, B=274372 nt (start:150511, end:150532) A=1345436 nt (start:4225, end:4204) CALCULATED DISTANCE APART: -108086 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTAAACGAAAACTGAATATCA - TGTTTCTTATATTTGAGGTCA) on contig 2 (5014909 nt) Astart:73173 Aend:73194 Bstart:28080 Bend:28059 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17385, end:17364) A=1227811 nt (start:6430, end:6409) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:34019, end:33998) A=855454 nt (start:18430, end:18409) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260837, end:2260858) B=356404 nt (start:342387, end:342408) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259777, end:2259798) B=356404 nt (start:343447, end:343468) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282502, end:282523) B=2196 nt (start:683, end:662) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12801, end:12780) A=91302 nt (start:11392, end:11371) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10643, end:10622) A=2766197 nt (start:2150920, end:2150899) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#148 -> -465185 <- tig#46, A=35830 nt (start:33694, end:33715) B=577887 nt (start:483049, end:483028) CALCULATED DISTANCE APART: -465185 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -40662 <- tig#443, A=736718 nt (start:676406, end:676427) B=1213 nt (start:350, end:329) CALCULATED DISTANCE APART: -40662 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ACAAAGGATTCATATTGTTAA - AGAGATATGGGCTCTTGATGA) on contig 14 (2271162 nt) Astart:1853304 Aend:1853283 Bstart:2002514 Bend:2002493 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728313, end:728334) A=1096 nt (start:398, end:377) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3583 <- tig#26, B=1171658 nt (start:1171268, end:1171289) A=1332708 nt (start:23193, end:23172) CALCULATED DISTANCE APART: -3583 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.54 -> -242538 <- tig#53, B=625914 nt (start:92912, end:92891) A=354284 nt (start:169626, end:169605) CALCULATED DISTANCE APART: -242538 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#92 -> -6676 <- tig#r.139, A=101136 nt (start:101092, end:101113) B=27696 nt (start:1064, end:1085) CALCULATED DISTANCE APART: -6676 < -2000 Pairs unsatisfied in distance within a contig. Pair (TAGATAGAAATATGGAAGCTG - ATTCTAAGTGTTTCTCTTCGC) on contig 1 (4853111 nt) Astart:346525 Aend:346546 Bstart:391802 Bend:391781 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig. Pair (TTCTTCTTACTTCTCTCTACA - TAATATATCATGAGAAAAATC) on contig 71 (271268 nt) Astart:123880 Aend:123859 Bstart:118506 Bend:118527 CALCULATED DISTANCE APART: 5374 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#47 -> -293197 <- tig#6, A=471458 nt (start:171904, end:171925) B=6870868 nt (start:13643, end:13622) CALCULATED DISTANCE APART: -293197 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#33 -> -492044 <- tig#32, A=1290487 nt (start:1235977, end:1235998) B=972151 nt (start:457534, end:457513) CALCULATED DISTANCE APART: -492044 < -2000 Pairs unsatisfied in distance within a contig. Pair (ACTACATATGTCTATAGATGT - TCGTGTAGAACTTCTCGTTTT) on contig 5 (3689108 nt) Astart:1169472 Aend:1169493 Bstart:1184607 Bend:1184586 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in pairing logic within a contig. Pair (TAAAAAATATTCTATTGGTTT - GTTAGTGGCTTCCGAAATTGC) on contig 19 (3531543 nt) Astart:3059776 Aend:3059755 Bstart:3048947 Bend:3048926 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730677, end:730698) B=3531543 nt (start:3200251, end:3200230) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282882, end:282903) B=2196 nt (start:1063, end:1042) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -40662 <- tig#443, A=736718 nt (start:676456, end:676477) B=1213 nt (start:400, end:379) CALCULATED DISTANCE APART: -40662 < -2000 Pairs unsatisfied in distance within a contig. Pair (GTTTATAACTTATAAGAAGCT - CATTTTTTTTATGGACGAATT) on contig 5 (3689108 nt) Astart:1169402 Aend:1169423 Bstart:1184537 Bend:1184516 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -1335763 <- tig#4, B=3747885 nt (start:2857572, end:2857593) A=3837743 nt (start:465450, end:465429) CALCULATED DISTANCE APART: -1335763 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.115 -> -3755846 <- tig#9, B=66709 nt (start:41018, end:40997) A=3747885 nt (start:3734828, end:3734807) CALCULATED DISTANCE APART: -3755846 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#19 -> -3620471 <- tig#r.54, A=3531543 nt (start:471661, end:471682) B=625914 nt (start:45325, end:45346) CALCULATED DISTANCE APART: -3620471 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAATTTCGTAATTGGCCCACT - ATTTATTTAAAGTAGTTAGTG) on contig 34 (1705564 nt) Astart:680104 Aend:680083 Bstart:665141 Bend:665162 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16335, end:16314) A=1227811 nt (start:7480, end:7459) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig. Pair (GGTTTTAGAATGCAAAAGATT - ACATATCTTATTATATAATGT) on contig 37 (853709 nt) Astart:538402 Aend:538423 Bstart:551071 Bend:551050 CALCULATED DISTANCE APART: 12669 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730357, end:730378) B=3531543 nt (start:3199931, end:3199910) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#40 -> -3631889 <- tig#r.15, A=668174 nt (start:21977, end:21998) B=3712591 nt (start:706899, end:706920) CALCULATED DISTANCE APART: -3631889 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TGTGTTGGGTAAACAATGGAG - TTATTTTTATTGGGTCAAAAT) on contig 19 (3531543 nt) Astart:3058138 Aend:3058117 Bstart:3050582 Bend:3050561 Pairs unsatisfied in distance within a contig. Pair (TTCACATCAGCTTTATGTCCA - CGGATCTATGAAACGGTGCTT) on contig 34 (1705564 nt) Astart:679754 Aend:679733 Bstart:664791 Bend:664812 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in pairing logic within a contig. Pair (ATGTATTTCATGTTTAATAAC - GTCTAATGAACATTTGCAAAA) on contig 21 (1811326 nt) Astart:154720 Aend:154699 Bstart:261420 Bend:261399 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.43 -> -583493 <- tig#48, B=1235946 nt (start:266022, end:266001) A=487359 nt (start:337471, end:337450) CALCULATED DISTANCE APART: -583493 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.48 -> -3108447 <- tig#12, B=487359 nt (start:404748, end:404727) A=2766197 nt (start:2723699, end:2723678) CALCULATED DISTANCE APART: -3108447 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.6 -> -6635905 <- tig#485, B=6870868 nt (start:6655425, end:6655404) A=1136 nt (start:480, end:459) CALCULATED DISTANCE APART: -6635905 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.46 -> -210460 <- tig#51, B=577887 nt (start:135876, end:135855) A=875428 nt (start:94584, end:94563) CALCULATED DISTANCE APART: -210460 < -2000 Pairs unsatisfied in distance within a contig. Pair (CCTAATATGATGACTTACACT - ATGTTGGCTTCTCTGCAATGA) on contig 1 (4853111 nt) Astart:346980 Aend:347001 Bstart:392257 Bend:392236 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig. Pair (TAAGTTAGATGCGGATAAGCA - TTGCTTCTGCAACGCACACTC) on contig 6 (6870868 nt) Astart:1138344 Aend:1138323 Bstart:1129917 Bend:1129938 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig. Pair (TTATCCAAAGCTCAATCTTAG - TACTTATGTGTTTAAATATGT) on contig 10 (3047199 nt) Astart:790189 Aend:790168 Bstart:766449 Bend:766470 CALCULATED DISTANCE APART: 23740 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#46 -> -2095390 <- tig#16, B=577887 nt (start:505847, end:505868) A=2098954 nt (start:2043350, end:2043329) CALCULATED DISTANCE APART: -2095390 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#22 -> -6369340 <- tig#6, B=1636463 nt (start:14757, end:14778) A=6870868 nt (start:4767634, end:4767613) CALCULATED DISTANCE APART: -6369340 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#125 -> -34982 <- tig#r.7, A=54013 nt (start:8636, end:8657) B=3534247 nt (start:3524642, end:3524663) CALCULATED DISTANCE APART: -34982 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#3 -> -3661467 <- tig#r.56, A=3889482 nt (start:401882, end:401903) B=262460 nt (start:68593, end:68614) CALCULATED DISTANCE APART: -3661467 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460584, end:460563) A=1345436 nt (start:25076, end:25055) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GACTAAATCACCATTTACGCA - ACACATCATATGTTTCTCATT) on contig 51 (875428 nt) Astart:133906 Aend:133885 Bstart:103110 Bend:103089 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#46 -> -2095431 <- tig#16, B=577887 nt (start:505858, end:505879) A=2098954 nt (start:2043402, end:2043381) CALCULATED DISTANCE APART: -2095431 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTGAAGGTGAAACAGACTATG - ACATGTCAAAACTGTTGAAAT) on contig 41 (667251 nt) Astart:88323 Aend:88302 Bstart:75643 Bend:75664 CALCULATED DISTANCE APART: 12680 Pairs unsatisfied in distance within a contig. Pair (CATTCGATTCGGATGAATTCA - TCATTTCCAGCATCTTTGTAG) on contig 1 (4853111 nt) Astart:346180 Aend:346201 Bstart:391457 Bend:391436 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459399, end:459378) A=1345436 nt (start:26261, end:26240) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#283 -> -3818458 <- tig#2, A=1768 nt (start:443, end:464) B=5014909 nt (start:3837133, end:3837112) CALCULATED DISTANCE APART: -3818458 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219411, end:4219390) A=2598 nt (start:2210, end:2189) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#39 -> -2984839 <- tig#12, B=736718 nt (start:457378, end:457399) A=2766197 nt (start:2725499, end:2725478) CALCULATED DISTANCE APART: -2984839 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#35 -> -1944863 <- tig#18, A=1135475 nt (start:357277, end:357298) B=1738864 nt (start:1186665, end:1186644) CALCULATED DISTANCE APART: -1944863 < -2000 Pairs unsatisfied in distance within a contig. Pair (GAACTGATTTGAGGCTGAACC - TCCTGACAGTTCTGAAAGCGA) on contig 37 (853709 nt) Astart:539087 Aend:539108 Bstart:551757 Bend:551736 CALCULATED DISTANCE APART: 12670 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#52 -> -353986 <- tig#1, B=356404 nt (start:89, end:110) A=4853111 nt (start:17671, end:17650) CALCULATED DISTANCE APART: -353986 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#6 -> -40178 <- tig#91, A=6870868 nt (start:6827075, end:6827096) B=101959 nt (start:16385, end:16364) CALCULATED DISTANCE APART: -40178 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730617, end:730638) B=3531543 nt (start:3200191, end:3200170) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#9 -> -3469176 <- tig#58, A=3747885 nt (start:435733, end:435754) B=374416 nt (start:177024, end:177003) CALCULATED DISTANCE APART: -3469176 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#120 -> -1341554 <- tig#29, B=44710 nt (start:43037, end:43058) A=1463708 nt (start:1359881, end:1359860) CALCULATED DISTANCE APART: -1341554 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2580, end:2601) A=258385 nt (start:1116, end:1095) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCTGTTTTTGGCTAGTTTGAA - TAAAGTCTCTCTTAAGCATTT) on contig 2 (5014909 nt) Astart:1268506 Aend:1268527 Bstart:1283168 Bend:1283147 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185724, end:4185703) A=3712591 nt (start:837, end:816) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.43 -> -1325771 <- tig#27, B=1235946 nt (start:334522, end:334501) A=1227811 nt (start:1011249, end:1011228) CALCULATED DISTANCE APART: -1325771 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3583 <- tig#26, B=1171658 nt (start:1171083, end:1171104) A=1332708 nt (start:23008, end:22987) CALCULATED DISTANCE APART: -3583 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#57 -> -3231864 <- tig#7, A=258385 nt (start:256029, end:256050) B=3534247 nt (start:3249508, end:3249487) CALCULATED DISTANCE APART: -3231864 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATTAGTTTTCAAAGTTAGATA - TTATAATAAAAAAAAATTCCG) on contig 19 (3531543 nt) Astart:3060476 Aend:3060455 Bstart:3048247 Bend:3048226 Pairs unsatisfied in distance within a contig. Pair (CATACTATATTTGATCCTAAA - AGAGAATCCGAGCTTAGGGCG) on contig 174 (11297 nt) Astart:10275 Aend:10254 Bstart:5471 Bend:5492 CALCULATED DISTANCE APART: 4804 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#79 -> -614150 <- tig#r.2, A=136600 nt (start:76442, end:76463) B=5014909 nt (start:4440917, end:4440938) CALCULATED DISTANCE APART: -614150 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17230, end:17209) A=1227811 nt (start:6585, end:6564) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.101 -> -46827 <- tig#107, B=84691 nt (start:23939, end:23918) A=68734 nt (start:42888, end:42867) CALCULATED DISTANCE APART: -46827 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#167 -> -15631 <- tig#r.131, A=25236 nt (start:25171, end:25192) B=36503 nt (start:937, end:958) CALCULATED DISTANCE APART: -15631 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728463, end:728484) A=1096 nt (start:548, end:527) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CTAGGGTTTGTGCTTGTTCCC - CTTCTATGATGTACTTAGACC) on contig 15 (3712591 nt) Astart:1717263 Aend:1717284 Bstart:1730755 Bend:1730776 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#115 -> -235518 <- tig#84, A=66709 nt (start:8010, end:8031) B=197079 nt (start:196819, end:196798) CALCULATED DISTANCE APART: -235518 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730487, end:730508) B=3531543 nt (start:3200061, end:3200040) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATTCGTTTGTGCAGTATGATC - GATGTCACTTTCAAGTTCGTC) on contig 37 (853709 nt) Astart:838739 Aend:838718 Bstart:823234 Bend:823255 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in distance within a contig. Pair (ACATATACCCTCTTAGTCACA - AATAGAACACAGAGATGAATG) on contig 37 (853709 nt) Astart:838544 Aend:838523 Bstart:823039 Bend:823060 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728628, end:728649) A=1096 nt (start:713, end:692) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459724, end:459703) A=1345436 nt (start:25936, end:25915) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:1790, end:1811) A=258385 nt (start:326, end:305) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259242, end:2259263) B=356404 nt (start:343982, end:344003) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#3 -> -3618470 <- tig#27, B=3889482 nt (start:316529, end:316550) A=1227811 nt (start:65517, end:65496) CALCULATED DISTANCE APART: -3618470 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATAGTTTTAAACATGATCATG - CTGAAGTTCCATTAAGAATGA) on contig 6 (6870868 nt) Astart:1139169 Aend:1139148 Bstart:1130686 Bend:1130707 CALCULATED DISTANCE APART: 8483 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10118, end:10097) A=2766197 nt (start:2151445, end:2151424) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.31 -> -71287 <- tig#98, B=976128 nt (start:16575, end:16554) A=88184 nt (start:74712, end:74691) CALCULATED DISTANCE APART: -71287 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728423, end:728444) A=1096 nt (start:508, end:487) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AACTCTCACATTCTCAAGAGT - TCTTTTCGTTTCCACTCTTGG) on contig 15 (3712591 nt) Astart:1716538 Aend:1716559 Bstart:1731480 Bend:1731501 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219431, end:4219410) A=2598 nt (start:2190, end:2169) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCTTGTCGCATTCTTTGACTT - ACATCGATGATATGTTGGTAA) on contig 131 (36503 nt) Astart:30596 Aend:30575 Bstart:14227 Bend:14248 CALCULATED DISTANCE APART: 16369 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10438, end:10417) A=2766197 nt (start:2151125, end:2151104) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.139 -> -11751 <- tig#109, B=27696 nt (start:12680, end:12659) A=66564 nt (start:19071, end:19050) CALCULATED DISTANCE APART: -11751 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136673, end:136694) B=15068 nt (start:1003, end:1024) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -205330 <- tig#84, A=354284 nt (start:325773, end:325794) B=197079 nt (start:196819, end:196798) CALCULATED DISTANCE APART: -205330 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.22 -> -475627 <- tig#55, B=1636463 nt (start:338743, end:338722) A=265143 nt (start:156884, end:156863) CALCULATED DISTANCE APART: -475627 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#129 -> -38110 <- tig#r.86, A=39603 nt (start:39018, end:39039) B=280231 nt (start:222706, end:222727) CALCULATED DISTANCE APART: -38110 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136263, end:136284) B=15068 nt (start:1413, end:1434) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12451, end:12430) A=91302 nt (start:11742, end:11721) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219396, end:4219375) A=2598 nt (start:2225, end:2204) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.46 -> -213331 <- tig#51, B=577887 nt (start:159958, end:159937) A=875428 nt (start:73373, end:73352) CALCULATED DISTANCE APART: -213331 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.16 -> -2024124 <- tig#291, B=2098954 nt (start:2043812, end:2043791) A=1714 nt (start:312, end:291) CALCULATED DISTANCE APART: -2024124 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17375, end:17354) A=1227811 nt (start:6440, end:6419) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259292, end:2259313) B=356404 nt (start:343932, end:343953) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#11 -> -4878196 <- tig#29, A=4628067 nt (start:684355, end:684376) B=1463708 nt (start:954484, end:954463) CALCULATED DISTANCE APART: -4878196 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17260, end:17239) A=1227811 nt (start:6555, end:6534) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig. Pair (GTCCCTTCCCCCAAGGGAGCG - CTCAGTACAGACCTTAGCAGT) on contig 15 (3712591 nt) Astart:3352502 Aend:3352523 Bstart:3377488 Bend:3377467 CALCULATED DISTANCE APART: 24986 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#102 -> -37092 <- tig#122, A=83426 nt (start:42606, end:42627) B=43035 nt (start:16272, end:16251) CALCULATED DISTANCE APART: -37092 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.38 -> -1310113 <- tig#33, B=1143067 nt (start:1039524, end:1039503) A=1290487 nt (start:290589, end:290568) CALCULATED DISTANCE APART: -1310113 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAATGAAACTAGATTTATCAC - CATCTGGAAGAGGTTCGATCC) on contig 1 (4853111 nt) Astart:346555 Aend:346576 Bstart:391832 Bend:391811 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig. Pair (GAGACAAGGATTTGCTCATGA - TTCTTCTGAAGTTTTAAAGTG) on contig 1 (4853111 nt) Astart:346655 Aend:346676 Bstart:391932 Bend:391911 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#46 -> -532918 <- tig#133, A=577887 nt (start:27191, end:27212) B=34073 nt (start:2222, end:2201) CALCULATED DISTANCE APART: -532918 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#12 -> -245456 <- tig#56, B=2766197 nt (start:2696531, end:2696552) A=262460 nt (start:195790, end:195769) CALCULATED DISTANCE APART: -245456 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#56 -> -1267903 <- tig#1, B=262460 nt (start:154673, end:154694) A=4853111 nt (start:1180116, end:1180095) CALCULATED DISTANCE APART: -1267903 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2585, end:2606) A=258385 nt (start:1121, end:1100) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16175, end:16154) A=1227811 nt (start:7640, end:7619) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#148 -> -836235 <- tig#r.36, A=35830 nt (start:33884, end:33905) B=855454 nt (start:1165, end:1186) CALCULATED DISTANCE APART: -836235 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#106 -> -176217 <- tig#90, B=117163 nt (start:27806, end:27827) A=112304 nt (start:106860, end:106839) CALCULATED DISTANCE APART: -176217 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10083, end:10062) A=2766197 nt (start:2151480, end:2151459) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig. Pair (CAATCTATTTGTTTCGGTTGA - CAGTGAGAAACTTGGACGAGC) on contig 30 (1050452 nt) Astart:650489 Aend:650510 Bstart:666255 Bend:666234 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in pairing logic within a contig. Pair (CATAGGATATAGAAAGATATT - ACACGTAAAACGTTTACATTG) on contig 21 (1811326 nt) Astart:154700 Aend:154679 Bstart:261440 Bend:261419 Pairs unsatisfied in distance within a contig. Pair (AACAGAGTGCTCTGCTCTTAT - AATGAGGTTTTGGCGTATTGG) on contig 6 (6870868 nt) Astart:1138299 Aend:1138278 Bstart:1129872 Bend:1129893 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282492, end:282513) B=2196 nt (start:673, end:652) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#53 -> -132517 <- tig#r.63, A=354284 nt (start:325780, end:325801) B=274372 nt (start:150359, end:150380) CALCULATED DISTANCE APART: -132517 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -24936 <- tig#98, A=354284 nt (start:325780, end:325801) B=88184 nt (start:16432, end:16411) CALCULATED DISTANCE APART: -24936 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GGCATCAGAAACTTCTAAAAC - AAGAAACCAATACCAGTTTCA) on contig 4 (3837743 nt) Astart:2358246 Aend:2358267 Bstart:2359816 Bend:2359837 Pairs unsatisfied in distance within a contig. Pair (TATTTAGCAAGCATGGATTCA - CAACTGGAGCAGCTAGTTTAA) on contig 6 (6870868 nt) Astart:1138369 Aend:1138348 Bstart:1129942 Bend:1129963 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282932, end:282953) B=2196 nt (start:1113, end:1092) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATCAGCTAGCACTATATATAT - AAGTTATAAGCAAGGCACAAT) on contig 19 (3531543 nt) Astart:3060456 Aend:3060435 Bstart:3048267 Bend:3048246 Pairs unsatisfied in pairing logic within a contig. Pair (CAGTAAATGTAACATTTTGTT - TTTAAGGAAACTTTACTATCA) on contig 15 (3712591 nt) Astart:1719178 Aend:1719199 Bstart:1728840 Bend:1728861 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.328 -> -54701 <- tig#102, B=1508 nt (start:1411, end:1390) A=83426 nt (start:73290, end:73269) CALCULATED DISTANCE APART: -54701 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#40 -> -3249356 <- tig#r.19, A=668174 nt (start:21982, end:22003) B=3531543 nt (start:908379, end:908400) CALCULATED DISTANCE APART: -3249356 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#46 -> -3144173 <- tig#12, B=577887 nt (start:138563, end:138584) A=2766197 nt (start:2724849, end:2724828) CALCULATED DISTANCE APART: -3144173 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#63 -> -330553 <- tig#78, B=274372 nt (start:54375, end:54396) A=184063 nt (start:130556, end:130535) CALCULATED DISTANCE APART: -330553 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TACTCCAACGAAGAGTATCAT - GCTAATATATGCGGTCGAAAA) on contig 19 (3531543 nt) Astart:3058373 Aend:3058352 Bstart:3050347 Bend:3050326 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -4201 <- tig#r.96, A=262460 nt (start:244336, end:244357) B=91302 nt (start:85225, end:85246) CALCULATED DISTANCE APART: -4201 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#118 -> -33564 <- tig#97, B=66247 nt (start:38212, end:38233) A=91050 nt (start:25529, end:25508) CALCULATED DISTANCE APART: -33564 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12876, end:12855) A=91302 nt (start:11317, end:11296) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:458824, end:458803) A=1345436 nt (start:26836, end:26815) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.17 -> -4235404 <- tig#3, B=1959065 nt (start:1446481, end:1446460) A=3889482 nt (start:2808923, end:2808902) CALCULATED DISTANCE APART: -4235404 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219066, end:4219045) A=2598 nt (start:2555, end:2534) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33429, end:33408) A=855454 nt (start:19020, end:18999) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GATGATAGATCTTATCATCGC - ATTGTTTGAAACGTTTCTTAA) on contig 15 (3712591 nt) Astart:1792126 Aend:1792105 Bstart:2056187 Bend:2056208 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#125 -> -34982 <- tig#r.7, A=54013 nt (start:8626, end:8647) B=3534247 nt (start:3524652, end:3524673) CALCULATED DISTANCE APART: -34982 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -4201 <- tig#r.96, A=262460 nt (start:244511, end:244532) B=91302 nt (start:85050, end:85071) CALCULATED DISTANCE APART: -4201 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16700, end:16679) A=1227811 nt (start:7115, end:7094) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGTTCTACTCAATGGTTGGTG - TGAAGGTTTGGTTCAACGGCA) on contig 1 (4853111 nt) Astart:347000 Aend:347021 Bstart:392277 Bend:392256 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#22 -> -6369340 <- tig#6, B=1636463 nt (start:14762, end:14783) A=6870868 nt (start:4767639, end:4767618) CALCULATED DISTANCE APART: -6369340 < -2000 Pairs unsatisfied in distance within a contig. Pair (GAAACTCGCGGAATTTTATTT - AGATGCATACTTGATTAACAG) on contig 46 (577887 nt) Astart:183330 Aend:183351 Bstart:200780 Bend:200759 CALCULATED DISTANCE APART: 17450 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#77 -> -122338 <- tig#99, B=160344 nt (start:25169, end:25190) A=88102 nt (start:7163, end:7142) CALCULATED DISTANCE APART: -122338 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTTAATGCTCCTGGTGGACCC - TCATGTAATTAAGATCCAATC) on contig 1 (4853111 nt) Astart:345915 Aend:345936 Bstart:391192 Bend:391171 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig. Pair (TTGGCAAGGCTTTAATATCTT - GAAATGGGAATCATCCTTTTT) on contig 5 (3689108 nt) Astart:1169972 Aend:1169993 Bstart:1185107 Bend:1185086 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig. Pair (AATAAAATAAAAATAAAGAGT - ACAGGTATCATATATAAGAAT) on contig 6 (6870868 nt) Astart:1137884 Aend:1137863 Bstart:1129457 Bend:1129478 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3583 <- tig#26, B=1171658 nt (start:1171293, end:1171314) A=1332708 nt (start:23218, end:23197) CALCULATED DISTANCE APART: -3583 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TACTTCAAAAGATATACAATT - TCTATATATTATTAGTTTGAT) on contig 19 (3531543 nt) Astart:3059218 Aend:3059197 Bstart:3049502 Bend:3049481 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135138, end:135159) B=15068 nt (start:2538, end:2559) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460039, end:460018) A=1345436 nt (start:25621, end:25600) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.15 -> -3863647 <- tig#1, B=3712591 nt (start:1966217, end:1966196) A=4853111 nt (start:1917430, end:1917409) CALCULATED DISTANCE APART: -3863647 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -214292 <- tig#6, A=354284 nt (start:134110, end:134131) B=6870868 nt (start:14118, end:14097) CALCULATED DISTANCE APART: -214292 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#31 -> -1173470 <- tig#41, A=976128 nt (start:41009, end:41030) B=667251 nt (start:258351, end:258330) CALCULATED DISTANCE APART: -1173470 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#11 -> -3778320 <- tig#16, B=4628067 nt (start:2873320, end:2873341) A=2098954 nt (start:2043573, end:2043552) CALCULATED DISTANCE APART: -3778320 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17060, end:17039) A=1227811 nt (start:6755, end:6734) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig. Pair (ACTGAAGTTACCAAAAAACTC - GACAAAACCGAAGAAGCTGCT) on contig 2 (5014909 nt) Astart:1269066 Aend:1269087 Bstart:1283728 Bend:1283707 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260817, end:2260838) B=356404 nt (start:342407, end:342428) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -322558 <- tig#r.572, A=2650694 nt (start:2309000, end:2309021) B=1031 nt (start:167, end:188) CALCULATED DISTANCE APART: -322558 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#37 -> -738605 <- tig#r.53, A=853709 nt (start:109439, end:109460) B=354284 nt (start:339949, end:339970) CALCULATED DISTANCE APART: -738605 < -2000 Pairs unsatisfied in distance within a contig. Pair (CCTCGATAACGATGAGCTTGA - AAGCCATTGGCGGGATGTTTA) on contig 30 (1050452 nt) Astart:648749 Aend:648770 Bstart:673783 Bend:673762 CALCULATED DISTANCE APART: 25034 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17305, end:17284) A=1227811 nt (start:6510, end:6489) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GTGGCTCTTCTTCTCTCTGCT - AATTAAGAGCTTTGTTTCTTC) on contig 15 (3712591 nt) Astart:1718463 Aend:1718484 Bstart:1729555 Bend:1729576 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#1 -> -4705790 <- tig#122, A=4853111 nt (start:143488, end:143509) B=43035 nt (start:16167, end:16146) CALCULATED DISTANCE APART: -4705790 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.25 -> -1385598 <- tig#38, B=1290536 nt (start:1101325, end:1101304) A=1143067 nt (start:304273, end:304252) CALCULATED DISTANCE APART: -1385598 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728438, end:728459) A=1096 nt (start:523, end:502) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.78 -> -275237 <- tig#61, B=184063 nt (start:135380, end:135359) A=221859 nt (start:159857, end:159836) CALCULATED DISTANCE APART: -275237 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082357, end:2082378) B=976128 nt (start:961165, end:961186) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#433 -> -944078 <- tig#r.29, A=1238 nt (start:491, end:512) B=1463708 nt (start:500377, end:500398) CALCULATED DISTANCE APART: -944078 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#35 -> -7558830 <- tig#6, A=1135475 nt (start:212240, end:212261) B=6870868 nt (start:6655595, end:6655574) CALCULATED DISTANCE APART: -7558830 < -2000 Pairs unsatisfied in distance within a contig. Pair (CGGTTTTGTTGTATATGTTGC - AACAATGTCTTTGACATCTTC) on contig 2 (5014909 nt) Astart:1269551 Aend:1269572 Bstart:1284213 Bend:1284192 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6228 <- tig#57, B=27696 nt (start:1529, end:1550) A=258385 nt (start:61, end:40) CALCULATED DISTANCE APART: -6228 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.101 -> -46850 <- tig#107, B=84691 nt (start:24129, end:24108) A=68734 nt (start:42721, end:42700) CALCULATED DISTANCE APART: -46850 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3583 <- tig#26, B=1171658 nt (start:1171208, end:1171229) A=1332708 nt (start:23133, end:23112) CALCULATED DISTANCE APART: -3583 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:283077, end:283098) B=2196 nt (start:1258, end:1237) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282807, end:282828) B=2196 nt (start:988, end:967) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GTATAGAACAAAGACAGATCC - GCTTTAATTCATCAATAAATT) on contig 53 (354284 nt) Astart:243014 Aend:242993 Bstart:340274 Bend:340295 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219196, end:4219175) A=2598 nt (start:2425, end:2404) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#119 -> -7707 <- tig#r.49, A=46878 nt (start:31850, end:31871) B=399963 nt (start:387284, end:387305) CALCULATED DISTANCE APART: -7707 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGACCATTTTTGCATAATTAC - TTCTGAAATCTTATAACTTAC) on contig 19 (3531543 nt) Astart:3059268 Aend:3059247 Bstart:3049452 Bend:3049431 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#118 -> -33564 <- tig#97, B=66247 nt (start:38037, end:38058) A=91050 nt (start:25354, end:25333) CALCULATED DISTANCE APART: -33564 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10318, end:10297) A=2766197 nt (start:2151245, end:2151224) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#34 -> -2271848 <- tig#31, A=1705564 nt (start:173766, end:173787) B=976128 nt (start:760050, end:760029) CALCULATED DISTANCE APART: -2271848 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TCCTTGCCATCCTTCTTAGCT - AATTCTGGTCTTGATGAATTA) on contig 19 (3531543 nt) Astart:3059053 Aend:3059032 Bstart:3049667 Bend:3049646 Pairs unsatisfied in distance within a contig. Pair (AGATTTATCACATGATCTCAT - AGCACCTTTCCATCTGGAAGA) on contig 1 (4853111 nt) Astart:346565 Aend:346586 Bstart:391842 Bend:391821 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#29 -> -579824 <- tig#28, A=1463708 nt (start:1144570, end:1144591) B=1171658 nt (start:280686, end:280665) CALCULATED DISTANCE APART: -579824 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#22 -> -6369409 <- tig#6, B=1636463 nt (start:14203, end:14224) A=6870868 nt (start:4767149, end:4767128) CALCULATED DISTANCE APART: -6369409 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TGAAATGTGTTTCTTTATAAG - CCTCTAATGCCAATTAAGCTC) on contig 19 (3531543 nt) Astart:3059586 Aend:3059565 Bstart:3049137 Bend:3049116 Pairs unsatisfied in pairing logic within a contig. Pair (CTTTTTTCCACTTTTCAAGTG - CATGGACAGGCCAAGACTGTT) on contig 7 (3534247 nt) Astart:2255842 Aend:2255821 Bstart:2238937 Bend:2238916 Pairs unsatisfied in pairing logic within a contig. Pair (GGGTCGAAACATAGTGGAGAT - CTAAATTTAACGTTAGGTTTA) on contig 15 (3712591 nt) Astart:1718218 Aend:1718239 Bstart:1729800 Bend:1729821 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#120 -> -1341554 <- tig#29, B=44710 nt (start:43087, end:43108) A=1463708 nt (start:1359931, end:1359910) CALCULATED DISTANCE APART: -1341554 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ACCAAAGATTAGGGTGAATCC - TTTTTAGTTGTCTTTGTTTCC) on contig 15 (3712591 nt) Astart:1791979 Aend:1791958 Bstart:2056042 Bend:2056063 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219091, end:4219070) A=2598 nt (start:2530, end:2509) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#265 -> -3126344 <- tig#4, A=1946 nt (start:1691, end:1712) B=3837743 nt (start:3146089, end:3146068) CALCULATED DISTANCE APART: -3126344 < -2000 Pairs unsatisfied in distance within a contig. Pair (ACTTCCAAAGCTCTAGGTGTT - GAAGGATGTCACAAGTAAGAA) on contig 6 (6870868 nt) Astart:1138429 Aend:1138408 Bstart:1130002 Bend:1130023 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459244, end:459223) A=1345436 nt (start:26416, end:26395) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#590 -> -1631326 <- tig#r.34, A=1018 nt (start:292, end:313) B=1705564 nt (start:54964, end:54985) CALCULATED DISTANCE APART: -1631326 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATAGTGGAGATCATATTCAAA - TAATCTCACTCTAAATTTAAC) on contig 15 (3712591 nt) Astart:1718228 Aend:1718249 Bstart:1729790 Bend:1729811 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -322558 <- tig#r.572, A=2650694 nt (start:2308605, end:2308626) B=1031 nt (start:562, end:583) CALCULATED DISTANCE APART: -322558 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TAATAGTGAAGAGGGCTAAAG - CAAAGAGTTCTTGCATCAATC) on contig 4 (3837743 nt) Astart:2358146 Aend:2358167 Bstart:2359916 Bend:2359937 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459154, end:459133) A=1345436 nt (start:26506, end:26485) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3583 <- tig#26, B=1171658 nt (start:1171458, end:1171479) A=1332708 nt (start:23383, end:23362) CALCULATED DISTANCE APART: -3583 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.7 -> -814158 <- tig#53, B=3534247 nt (start:652893, end:652872) A=354284 nt (start:181265, end:181244) CALCULATED DISTANCE APART: -814158 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:1765, end:1786) A=258385 nt (start:301, end:280) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATAGAGTTAAACTATTACGAG - AACATGAAAGGATTCTATCTT) on contig 30 (1050452 nt) Astart:649774 Aend:649795 Bstart:665540 Bend:665519 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in distance within a contig. Pair (GTTCTAGATTCTTAGATGATT - AGAAACATGTTTGGCAGAGGA) on contig 37 (853709 nt) Astart:538872 Aend:538893 Bstart:551542 Bend:551521 CALCULATED DISTANCE APART: 12670 Pairs unsatisfied in pairing logic within a contig. Pair (AGAAACACATTGTATTTGTTC - TTCCGTCTCAAATACTGGCTC) on contig 19 (3531543 nt) Astart:3059421 Aend:3059400 Bstart:3049302 Bend:3049281 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282367, end:282388) B=2196 nt (start:548, end:527) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33774, end:33753) A=855454 nt (start:18675, end:18654) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.133 -> -1663591 <- tig#34, B=34073 nt (start:4293, end:4272) A=1705564 nt (start:1679298, end:1679277) CALCULATED DISTANCE APART: -1663591 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TGCGTTTGATATTATAATAGG - GACAGAATTGCATATAAGGCA) on contig 19 (3531543 nt) Astart:3058243 Aend:3058222 Bstart:3050477 Bend:3050456 Pairs unsatisfied in distance within a contig. Pair (AAGACTCAACCTTTTCGCGGT - GTGGCGTCCTTCTATATACCT) on contig 5 (3689108 nt) Astart:1178442 Aend:1178421 Bstart:1163308 Bend:1163329 CALCULATED DISTANCE APART: 15134 Pairs unsatisfied in distance within a contig. Pair (AAGCCGAAAGCACAAGGTCCC - TCAATTTAGTCAAAACTCTAA) on contig 2 (5014909 nt) Astart:1269236 Aend:1269257 Bstart:1283898 Bend:1283877 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.6 -> -1021234 <- tig#25, B=6870868 nt (start:12288, end:12267) A=1290536 nt (start:1028946, end:1028925) CALCULATED DISTANCE APART: -1021234 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TAACTATACAATATGAAGATA - AGGTTTGTTACTGCAATGGGG) on contig 4 (3837743 nt) Astart:2358066 Aend:2358087 Bstart:2359996 Bend:2360017 Pairs unsatisfied in pairing logic within a contig. Pair (CAAAAAATAATAATAGTGAAG - TTGCATCAATCTACCTAATGT) on contig 4 (3837743 nt) Astart:2358136 Aend:2358157 Bstart:2359926 Bend:2359947 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#34 -> -3900848 <- tig#r.11, A=1705564 nt (start:54487, end:54508) B=4628067 nt (start:2358296, end:2358317) CALCULATED DISTANCE APART: -3900848 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460574, end:460553) A=1345436 nt (start:25086, end:25065) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#47 -> -293197 <- tig#6, A=471458 nt (start:171964, end:171985) B=6870868 nt (start:13703, end:13682) CALCULATED DISTANCE APART: -293197 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#63 -> -147258 <- tig#r.78, A=274372 nt (start:183101, end:183122) B=184063 nt (start:108076, end:108097) CALCULATED DISTANCE APART: -147258 < -2000 Pairs unsatisfied in distance within a contig. Pair (CATTTAAGGCAAAACCAACAC - CACACAAATAAGCTGAGATAG) on contig 27 (1227811 nt) Astart:434590 Aend:434611 Bstart:450843 Bend:450822 CALCULATED DISTANCE APART: 16253 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136348, end:136369) B=15068 nt (start:1328, end:1349) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#265 -> -3126344 <- tig#4, A=1946 nt (start:1556, end:1577) B=3837743 nt (start:3145954, end:3145933) CALCULATED DISTANCE APART: -3126344 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.46 -> -325691 <- tig#54, B=577887 nt (start:160463, end:160442) A=625914 nt (start:185228, end:185207) CALCULATED DISTANCE APART: -325691 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#36 -> -890709 <- tig#31, B=855454 nt (start:85379, end:85400) A=976128 nt (start:140634, end:140613) CALCULATED DISTANCE APART: -890709 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:34024, end:34003) A=855454 nt (start:18425, end:18404) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.328 -> -54701 <- tig#102, B=1508 nt (start:1396, end:1375) A=83426 nt (start:73305, end:73284) CALCULATED DISTANCE APART: -54701 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GTCCCAAAAACTCAGATTTTT - GAGAAATATGTTTTTGAAAAC) on contig 15 (3712591 nt) Astart:1718113 Aend:1718134 Bstart:1729905 Bend:1729926 Pairs unsatisfied in pairing logic within a contig. Pair (GTTTCTTAGAGAGAAACAATA - AACTTGCATTGTCAGTGGACA) on contig 19 (3531543 nt) Astart:3060011 Aend:3059990 Bstart:3048712 Bend:3048691 Pairs unsatisfied in pairing logic within a contig. Pair (TCTCTCGTCTTCTTCGTTGCT - TTTTTTGCCAACGGTTAGTCC) on contig 15 (3712591 nt) Astart:1792066 Aend:1792045 Bstart:2056127 Bend:2056148 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459054, end:459033) A=1345436 nt (start:26606, end:26585) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460354, end:460333) A=1345436 nt (start:25306, end:25285) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig. Pair (CGAAGATGACAGCGGCCTACG - GTTGTTAGCGGATAAATCCGT) on contig 19 (3531543 nt) Astart:1348169 Aend:1348148 Bstart:1311024 Bend:1311045 CALCULATED DISTANCE APART: 37145 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#279 -> -15070 <- tig#131, B=1777 nt (start:421, end:442) A=36503 nt (start:33714, end:33693) CALCULATED DISTANCE APART: -15070 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTTTTTCAGTTTCTCGCATGT - ATCCGGAGAGCCAAGATTCCA) on contig 15 (3712591 nt) Astart:3352382 Aend:3352403 Bstart:3377368 Bend:3377347 CALCULATED DISTANCE APART: 24986 Pairs unsatisfied in pairing logic within a contig. Pair (TTTCGAAAAAACATACATATA - CCACGAAGTGATATATCTTAA) on contig 19 (3531543 nt) Astart:3058488 Aend:3058467 Bstart:3050232 Bend:3050211 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.38 -> -1310007 <- tig#33, B=1143067 nt (start:1039064, end:1039043) A=1290487 nt (start:290943, end:290922) CALCULATED DISTANCE APART: -1310007 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TCTTTTCGTTATTTTTTAAGA - TCGATCCTCGCCGGGGGCTTT) on contig 15 (3712591 nt) Astart:1719318 Aend:1719339 Bstart:1728700 Bend:1728721 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260682, end:2260703) B=356404 nt (start:342542, end:342563) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282772, end:282793) B=2196 nt (start:953, end:932) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGAGTGATAATGATATGGCTC - CTATTTCAATGTTCTAAAGCC) on contig 6 (6870868 nt) Astart:1138214 Aend:1138193 Bstart:1129787 Bend:1129808 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig. Pair (CAATATCGTCTTCCGAAGCTC - TCCTATTGTTAGATTTATATA) on contig 5 (3689108 nt) Astart:1169922 Aend:1169943 Bstart:1185057 Bend:1185036 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:458659, end:458638) A=1345436 nt (start:27001, end:26980) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728763, end:728784) A=1096 nt (start:848, end:827) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#433 -> -944078 <- tig#r.29, A=1238 nt (start:906, end:927) B=1463708 nt (start:499962, end:499983) CALCULATED DISTANCE APART: -944078 < -2000 Pairs unsatisfied in distance within a contig. Pair (AACAACAATACCAAAGTACAC - CAACTCACAAAACTCCTTCTG) on contig 41 (667251 nt) Astart:88633 Aend:88612 Bstart:75953 Bend:75974 CALCULATED DISTANCE APART: 12680 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#2 -> -5056835 <- tig#r.48, A=5014909 nt (start:39826, end:39847) B=487359 nt (start:385607, end:385628) CALCULATED DISTANCE APART: -5056835 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459529, end:459508) A=1345436 nt (start:26131, end:26110) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.38 -> -1426764 <- tig#29, B=1143067 nt (start:1039744, end:1039723) A=1463708 nt (start:407020, end:406999) CALCULATED DISTANCE APART: -1426764 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#31 -> -921133 <- tig#r.134, A=976128 nt (start:42149, end:42170) B=33262 nt (start:26108, end:26129) CALCULATED DISTANCE APART: -921133 < -2000 Pairs unsatisfied in distance within a contig. Pair (CAACACTTGCTTCCACCGTTA - AGTTTCGTTAATTTTTTCGAT) on contig 6 (6870868 nt) Astart:1138974 Aend:1138953 Bstart:1130491 Bend:1130512 CALCULATED DISTANCE APART: 8483 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#433 -> -944078 <- tig#r.29, A=1238 nt (start:501, end:522) B=1463708 nt (start:500367, end:500388) CALCULATED DISTANCE APART: -944078 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#167 -> -222977 <- tig#r.74, A=25236 nt (start:10100, end:10121) B=238371 nt (start:10530, end:10551) CALCULATED DISTANCE APART: -222977 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#15 -> -8116131 <- tig#6, B=3712591 nt (start:343069, end:343090) A=6870868 nt (start:4766609, end:4766588) CALCULATED DISTANCE APART: -8116131 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#127 -> -717436 <- tig#r.33, A=80830 nt (start:20141, end:20162) B=1290487 nt (start:613740, end:613761) CALCULATED DISTANCE APART: -717436 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728738, end:728759) A=1096 nt (start:823, end:802) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTCTTCTGTGTAAAGGTTTTT - CTTGGTCCGAGCTCTCCAAAC) on contig 30 (1050452 nt) Astart:650429 Aend:650450 Bstart:666195 Bend:666174 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#305 -> -2202335 <- tig#r.19, A=1638 nt (start:132, end:153) B=3531543 nt (start:1310714, end:1310735) CALCULATED DISTANCE APART: -2202335 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:134848, end:134869) B=15068 nt (start:2828, end:2849) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#103 -> -216461 <- tig#48, A=211876 nt (start:14349, end:14370) B=487359 nt (start:38934, end:38913) CALCULATED DISTANCE APART: -216461 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#57 -> -3231864 <- tig#7, A=258385 nt (start:256024, end:256045) B=3534247 nt (start:3249503, end:3249482) CALCULATED DISTANCE APART: -3231864 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.257 -> -2902765 <- tig#8, B=1995 nt (start:1546, end:1525) A=5070776 nt (start:2921219, end:2921198) CALCULATED DISTANCE APART: -2902765 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTTCTTTGGCAAGGCTTTAAT - GGGAATCATCCTTTTTGCTAT) on contig 5 (3689108 nt) Astart:1169967 Aend:1169988 Bstart:1185102 Bend:1185081 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#34 -> -5251284 <- tig#2, A=1705564 nt (start:270899, end:270920) B=5014909 nt (start:3836619, end:3836598) CALCULATED DISTANCE APART: -5251284 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#41 -> -310074 <- tig#43, B=667251 nt (start:461858, end:461879) A=1235946 nt (start:124681, end:124660) CALCULATED DISTANCE APART: -310074 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:458749, end:458728) A=1345436 nt (start:26911, end:26890) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CCGAGCAGGTAATGACACCAA - AAGTAAGTTGAACGATTGACT) on contig 15 (3712591 nt) Astart:1717153 Aend:1717174 Bstart:1730865 Bend:1730886 Pairs unsatisfied in pairing logic within a contig. Pair (CCTTCTTAGCTTTGTGGTAGA - AATAACACGGAATTCTGGTCT) on contig 19 (3531543 nt) Astart:3059043 Aend:3059022 Bstart:3049677 Bend:3049656 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33624, end:33603) A=855454 nt (start:18825, end:18804) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#38 -> -1000456 <- tig#78, B=1143067 nt (start:253077, end:253098) A=184063 nt (start:130466, end:130445) CALCULATED DISTANCE APART: -1000456 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTATTTTATTTAATTTAATAA - TAATTTCTACAAAACAGAAGA) on contig 71 (271268 nt) Astart:123999 Aend:123978 Bstart:118631 Bend:118652 CALCULATED DISTANCE APART: 5368 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.16 -> -2024124 <- tig#291, B=2098954 nt (start:2043807, end:2043786) A=1714 nt (start:317, end:296) CALCULATED DISTANCE APART: -2024124 < -2000 Pairs unsatisfied in distance within a contig. Pair (TAGTGCTGGAGTTTCTGTACA - CATTTCAGAGACAAAATTTTC) on contig 2 (5014909 nt) Astart:1268831 Aend:1268852 Bstart:1283493 Bend:1283472 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12646, end:12625) A=91302 nt (start:11547, end:11526) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730247, end:730268) B=3531543 nt (start:3199821, end:3199800) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.403 -> -2330792 <- tig#13, B=1321 nt (start:470, end:449) A=2650694 nt (start:2350322, end:2350301) CALCULATED DISTANCE APART: -2330792 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#7 -> -573330 <- tig#30, B=3534247 nt (start:3523717, end:3523738) A=1050452 nt (start:582800, end:582779) CALCULATED DISTANCE APART: -573330 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3583 <- tig#26, B=1171658 nt (start:1171058, end:1171079) A=1332708 nt (start:22983, end:22962) CALCULATED DISTANCE APART: -3583 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TATAGTGTTGTCAAAAAAAGA - AATATGCCAAGATTGTCAGAG) on contig 15 (3712591 nt) Astart:1719403 Aend:1719424 Bstart:1728615 Bend:1728636 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#175 -> -2741574 <- tig#3, B=11120 nt (start:2809, end:2830) A=3889482 nt (start:2753263, end:2753242) CALCULATED DISTANCE APART: -2741574 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10288, end:10267) A=2766197 nt (start:2151275, end:2151254) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AACTACTGTAAATTTCTTGGC - TGTGACAACTCTATAGTCTCC) on contig 4 (3837743 nt) Astart:2357931 Aend:2357952 Bstart:2360131 Bend:2360152 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#279 -> -203242 <- tig#86, A=1777 nt (start:1584, end:1605) B=280231 nt (start:223049, end:223028) CALCULATED DISTANCE APART: -203242 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#279 -> -8709 <- tig#r.53, A=1777 nt (start:1584, end:1605) B=354284 nt (start:325768, end:325789) CALCULATED DISTANCE APART: -8709 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#279 -> -61215 <- tig#r.98, A=1777 nt (start:1584, end:1605) B=88184 nt (start:7162, end:7183) CALCULATED DISTANCE APART: -61215 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#40 -> -506904 <- tig#r.79, A=668174 nt (start:201482, end:201503) B=136600 nt (start:76388, end:76409) CALCULATED DISTANCE APART: -506904 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#10 -> -2925315 <- tig#9, A=3047199 nt (start:251214, end:251235) B=3747885 nt (start:149330, end:149309) CALCULATED DISTANCE APART: -2925315 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:458814, end:458793) A=1345436 nt (start:26846, end:26825) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082527, end:2082548) B=976128 nt (start:960995, end:961016) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459509, end:459488) A=1345436 nt (start:26151, end:26130) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATGGCATATGAAGATACTGTA - CTTTGTGGCGATCAATCAAGA) on contig 2 (5014909 nt) Astart:1269666 Aend:1269687 Bstart:1284328 Bend:1284307 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#342 -> -576943 <- tig#43, B=1467 nt (start:1326, end:1347) A=1235946 nt (start:596802, end:596781) CALCULATED DISTANCE APART: -576943 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTGCAAGGGTCCTCGATAACG - CGGGATGTTTAACCACATTTG) on contig 30 (1050452 nt) Astart:648739 Aend:648760 Bstart:673773 Bend:673752 CALCULATED DISTANCE APART: 25034 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.29 -> -1051406 <- tig#12, B=1463708 nt (start:953464, end:953443) A=2766197 nt (start:117942, end:117921) CALCULATED DISTANCE APART: -1051406 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TGCTCTTTATATACAACAAGT - CACCCAGATTGGTGGGATATA) on contig 19 (3531543 nt) Astart:3059976 Aend:3059955 Bstart:3048747 Bend:3048726 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136578, end:136599) B=15068 nt (start:1098, end:1119) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CTTCTTCGTCTCGGTCTCTTA - GTATGTGATCTGCGAAAAAAT) on contig 15 (3712591 nt) Astart:1717013 Aend:1717034 Bstart:1731005 Bend:1731026 Pairs unsatisfied in distance within a contig. Pair (CTTCTTTAAACTCTACTGGAG - GAAGTTTAAACTCACCAATGT) on contig 5 (3689108 nt) Astart:1178492 Aend:1178471 Bstart:1163358 Bend:1163379 CALCULATED DISTANCE APART: 15134 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#19 -> -3197164 <- tig#47, A=3531543 nt (start:469376, end:469397) B=471458 nt (start:154997, end:154976) CALCULATED DISTANCE APART: -3197164 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.403 -> -2330792 <- tig#13, B=1321 nt (start:505, end:484) A=2650694 nt (start:2350287, end:2350266) CALCULATED DISTANCE APART: -2330792 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#19 -> -1649636 <- tig#31, A=3531543 nt (start:1878097, end:1878118) B=976128 nt (start:16190, end:16169) CALCULATED DISTANCE APART: -1649636 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#590 -> -1631326 <- tig#r.34, A=1018 nt (start:597, end:618) B=1705564 nt (start:54659, end:54680) CALCULATED DISTANCE APART: -1631326 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#46 -> -3500669 <- tig#6, A=577887 nt (start:566895, end:566916) B=6870868 nt (start:3509677, end:3509656) CALCULATED DISTANCE APART: -3500669 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.403 -> -2330792 <- tig#13, B=1321 nt (start:265, end:244) A=2650694 nt (start:2350527, end:2350506) CALCULATED DISTANCE APART: -2330792 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#63 -> -330553 <- tig#78, B=274372 nt (start:54370, end:54391) A=184063 nt (start:130551, end:130530) CALCULATED DISTANCE APART: -330553 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#120 -> -1341555 <- tig#29, B=44710 nt (start:44351, end:44372) A=1463708 nt (start:1361196, end:1361175) CALCULATED DISTANCE APART: -1341555 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#10 -> -2837213 <- tig#45, B=3047199 nt (start:393019, end:393040) A=528133 nt (start:203033, end:203012) CALCULATED DISTANCE APART: -2837213 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260282, end:2260303) B=356404 nt (start:342942, end:342963) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.6 -> -5416205 <- tig#35, B=6870868 nt (start:4672149, end:4672128) A=1135475 nt (start:764056, end:764035) CALCULATED DISTANCE APART: -5416205 < -2000 Pairs unsatisfied in distance within a contig. Pair (GAACTCTGTAAATATGACTAT - GAAGTGGAAAGAACTAGCGTC) on contig 6 (6870868 nt) Astart:1138109 Aend:1138088 Bstart:1129682 Bend:1129703 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#36 -> -741896 <- tig#37, A=855454 nt (start:790660, end:790681) B=853709 nt (start:697102, end:697081) CALCULATED DISTANCE APART: -741896 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTGTTCTGTTATTGTTAGATG - GTTGGTGTCGATCGACATCTC) on contig 41 (667251 nt) Astart:88398 Aend:88377 Bstart:75718 Bend:75739 CALCULATED DISTANCE APART: 12680 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.39 -> -384043 <- tig#56, B=736718 nt (start:333668, end:333647) A=262460 nt (start:70375, end:70354) CALCULATED DISTANCE APART: -384043 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -621133 <- tig#r.66, A=2766197 nt (start:2129453, end:2129474) B=201913 nt (start:197524, end:197545) CALCULATED DISTANCE APART: -621133 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#118 -> -44789 <- tig#51, A=66247 nt (start:2292, end:2313) B=875428 nt (start:834, end:813) CALCULATED DISTANCE APART: -44789 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6228 <- tig#57, B=27696 nt (start:1564, end:1585) A=258385 nt (start:96, end:75) CALCULATED DISTANCE APART: -6228 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#118 -> -33564 <- tig#97, B=66247 nt (start:38117, end:38138) A=91050 nt (start:25434, end:25413) CALCULATED DISTANCE APART: -33564 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGATGTCCAAAGTGTGTTTTT - TGCTATTTTGTTACTTCGTGT) on contig 5 (3689108 nt) Astart:1169487 Aend:1169508 Bstart:1184622 Bend:1184601 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16615, end:16594) A=1227811 nt (start:7200, end:7179) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730992, end:731013) B=3531543 nt (start:3200566, end:3200545) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460324, end:460303) A=1345436 nt (start:25336, end:25315) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig. Pair (GGTTCGGGTTTACACGGCGGA - CAGATGAGAGATTCAGCAAGC) on contig 10 (3047199 nt) Astart:789839 Aend:789818 Bstart:775926 Bend:775947 CALCULATED DISTANCE APART: 13913 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259957, end:2259978) B=356404 nt (start:343267, end:343288) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -40662 <- tig#443, A=736718 nt (start:676976, end:676997) B=1213 nt (start:920, end:899) CALCULATED DISTANCE APART: -40662 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ACAATTAACGAAGAACTTGTA - TTTACAGCAAAAAATTCTATA) on contig 19 (3531543 nt) Astart:3059203 Aend:3059182 Bstart:3049517 Bend:3049496 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728828, end:728849) A=1096 nt (start:913, end:892) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#20 -> -2095995 <- tig#r.11, A=2328057 nt (start:2275526, end:2275547) B=4628067 nt (start:2564603, end:2564624) CALCULATED DISTANCE APART: -2095995 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#51 -> -2272890 <- tig#9, B=875428 nt (start:502349, end:502370) A=3747885 nt (start:1919811, end:1919790) CALCULATED DISTANCE APART: -2272890 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -621133 <- tig#r.66, A=2766197 nt (start:2129748, end:2129769) B=201913 nt (start:197229, end:197250) CALCULATED DISTANCE APART: -621133 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728863, end:728884) A=1096 nt (start:948, end:927) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.38 -> -1426766 <- tig#29, B=1143067 nt (start:1039569, end:1039548) A=1463708 nt (start:407197, end:407176) CALCULATED DISTANCE APART: -1426766 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#265 -> -3126344 <- tig#4, A=1946 nt (start:1706, end:1727) B=3837743 nt (start:3146104, end:3146083) CALCULATED DISTANCE APART: -3126344 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:34014, end:33993) A=855454 nt (start:18435, end:18414) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#64 -> -218030 <- tig#r.139, A=211265 nt (start:12, end:33) B=27696 nt (start:919, end:940) CALCULATED DISTANCE APART: -218030 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.12 -> -2596334 <- tig#32, B=2766197 nt (start:2585424, end:2585403) A=972151 nt (start:30910, end:30889) CALCULATED DISTANCE APART: -2596334 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.48 -> -3108448 <- tig#12, B=487359 nt (start:404014, end:403993) A=2766197 nt (start:2724434, end:2724413) CALCULATED DISTANCE APART: -3108448 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2285, end:2306) A=258385 nt (start:821, end:800) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33524, end:33503) A=855454 nt (start:18925, end:18904) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3583 <- tig#26, B=1171658 nt (start:1171448, end:1171469) A=1332708 nt (start:23373, end:23352) CALCULATED DISTANCE APART: -3583 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GAGAGATTGATGACATTTATT - AGGAGGATGTAACTAAAAAAC) on contig 19 (3531543 nt) Astart:3058868 Aend:3058847 Bstart:3049852 Bend:3049831 Pairs unsatisfied in distance within a contig. Pair (ATTGTGAGTCCTTGGAGAGAC - TGTGCCATACAAGAGAGCTAG) on contig 6 (6870868 nt) Astart:4411864 Aend:4411885 Bstart:4445818 Bend:4445797 CALCULATED DISTANCE APART: 33954 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#590 -> -1631326 <- tig#r.34, A=1018 nt (start:252, end:273) B=1705564 nt (start:55004, end:55025) CALCULATED DISTANCE APART: -1631326 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.1 -> -4590186 <- tig#16, B=4853111 nt (start:3207887, end:3207866) A=2098954 nt (start:1402299, end:1402278) CALCULATED DISTANCE APART: -4590186 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#54 -> -868447 <- tig#30, A=625914 nt (start:324352, end:324373) B=1050452 nt (start:586885, end:586864) CALCULATED DISTANCE APART: -868447 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GTGATTTTTTATACGGCCATG - GCCGAGTCCATAGCCCAAGTA) on contig 19 (3531543 nt) Astart:3059521 Aend:3059500 Bstart:3049202 Bend:3049181 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -1168778 <- tig#384, A=5070776 nt (start:3883070, end:3883091) B=1359 nt (start:1072, end:1051) CALCULATED DISTANCE APART: -1168778 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTAAATCGGTCATCACTAAAG - TCTGCTTTTCTCTTAACACAT) on contig 6 (6870868 nt) Astart:1137954 Aend:1137933 Bstart:1129527 Bend:1129548 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.31 -> -71289 <- tig#98, B=976128 nt (start:16805, end:16784) A=88184 nt (start:74484, end:74463) CALCULATED DISTANCE APART: -71289 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGTCTTCTAACAAGGATACAC - AGTAGTGTATCCTTGTTAGAA) on contig 53 (354284 nt) Astart:325806 Aend:325785 Bstart:325781 Bend:325802 CALCULATED DISTANCE APART: 25 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#84 -> -306079 <- tig#53, B=197079 nt (start:196806, end:196827) A=354284 nt (start:325806, end:325785) CALCULATED DISTANCE APART: -306079 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGAATTTTTATTTCGAAAAGA - CTTATTGTGAAAAACTATGCG) on contig 19 (3531543 nt) Astart:3058698 Aend:3058677 Bstart:3050022 Bend:3050001 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#283 -> -3818458 <- tig#2, A=1768 nt (start:413, end:434) B=5014909 nt (start:3837103, end:3837082) CALCULATED DISTANCE APART: -3818458 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728153, end:728174) A=1096 nt (start:238, end:217) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136343, end:136364) B=15068 nt (start:1333, end:1354) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#75 -> -1731933 <- tig#19, A=373953 nt (start:275485, end:275506) B=3531543 nt (start:1653465, end:1653444) CALCULATED DISTANCE APART: -1731933 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082642, end:2082663) B=976128 nt (start:960880, end:960901) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185644, end:4185623) A=3712591 nt (start:917, end:896) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#36 -> -228778 <- tig#r.41, A=855454 nt (start:790430, end:790451) B=667251 nt (start:483497, end:483518) CALCULATED DISTANCE APART: -228778 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.47 -> -37905 <- tig#541, B=471458 nt (start:57227, end:57206) A=1068 nt (start:678, end:657) CALCULATED DISTANCE APART: -37905 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTTATTGCCGACGAGGCTAAA - AAAGTGGTTTTACCAATACCT) on contig 2 (5014909 nt) Astart:1269946 Aend:1269967 Bstart:1284608 Bend:1284587 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260577, end:2260598) B=356404 nt (start:342647, end:342668) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#103 -> -188044 <- tig#521, A=211876 nt (start:4844, end:4865) B=1100 nt (start:1012, end:991) CALCULATED DISTANCE APART: -188044 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#51 -> -548590 <- tig#79, B=875428 nt (start:391061, end:391082) A=136600 nt (start:84223, end:84202) CALCULATED DISTANCE APART: -548590 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAATTCAAAGAGTTTGAAAGG - CGAAGTTCTTGCCAGATCCTT) on contig 2 (5014909 nt) Astart:1270066 Aend:1270087 Bstart:1284728 Bend:1284707 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig. Pair (CGATATCGCGGGTCTTGAAGC - TCTATTGTCTAGTCGAAGTCT) on contig 5 (3689108 nt) Astart:1178512 Aend:1178491 Bstart:1163378 Bend:1163399 CALCULATED DISTANCE APART: 15134 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#283 -> -3818458 <- tig#2, A=1768 nt (start:458, end:479) B=5014909 nt (start:3837148, end:3837127) CALCULATED DISTANCE APART: -3818458 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460279, end:460258) A=1345436 nt (start:25381, end:25360) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460009, end:459988) A=1345436 nt (start:25651, end:25630) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#148 -> -836235 <- tig#r.36, A=35830 nt (start:33874, end:33895) B=855454 nt (start:1175, end:1196) CALCULATED DISTANCE APART: -836235 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTTAGTTTGTAACACTTGTTT - TTGAATTTAATGAAAGCAAAC) on contig 6 (6870868 nt) Astart:1139139 Aend:1139118 Bstart:1130656 Bend:1130677 CALCULATED DISTANCE APART: 8483 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:729872, end:729893) B=3531543 nt (start:3199446, end:3199425) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#92 -> -6676 <- tig#r.139, A=101136 nt (start:101107, end:101128) B=27696 nt (start:1049, end:1070) CALCULATED DISTANCE APART: -6676 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -4604249 <- tig#12, B=4628067 nt (start:3444107, end:3444086) A=2766197 nt (start:1180142, end:1180121) CALCULATED DISTANCE APART: -4604249 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2005, end:2026) A=258385 nt (start:541, end:520) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#11 -> -5298498 <- tig#r.19, A=4628067 nt (start:147078, end:147099) B=3531543 nt (start:2694034, end:2694055) CALCULATED DISTANCE APART: -5298498 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#114 -> -17946 <- tig#167, A=54818 nt (start:17334, end:17355) B=25236 nt (start:462, end:441) CALCULATED DISTANCE APART: -17946 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:729967, end:729988) B=3531543 nt (start:3199541, end:3199520) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GTGAAGAGGGCTAAAGTGGAA - CTGTTCAAAGAGTTCTTGCAT) on contig 4 (3837743 nt) Astart:2358151 Aend:2358172 Bstart:2359911 Bend:2359932 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.74 -> -1813138 <- tig#17, B=238371 nt (start:59083, end:59062) A=1959065 nt (start:1774055, end:1774034) CALCULATED DISTANCE APART: -1813138 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135463, end:135484) B=15068 nt (start:2213, end:2234) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#36 -> -64204 <- tig#94, A=855454 nt (start:790190, end:790211) B=93323 nt (start:18940, end:18919) CALCULATED DISTANCE APART: -64204 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16745, end:16724) A=1227811 nt (start:7070, end:7049) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#11 -> -4878223 <- tig#29, A=4628067 nt (start:683843, end:683864) B=1463708 nt (start:953999, end:953978) CALCULATED DISTANCE APART: -4878223 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#118 -> -33564 <- tig#97, B=66247 nt (start:38197, end:38218) A=91050 nt (start:25514, end:25493) CALCULATED DISTANCE APART: -33564 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.1 -> -4149799 <- tig#16, B=4853111 nt (start:2126149, end:2126128) A=2098954 nt (start:2043650, end:2043629) CALCULATED DISTANCE APART: -4149799 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAAACCGAAGATGACAGCGGC - TAGCGGATAAATCCGTTTGTG) on contig 19 (3531543 nt) Astart:1348174 Aend:1348153 Bstart:1311029 Bend:1311050 CALCULATED DISTANCE APART: 37145 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082507, end:2082528) B=976128 nt (start:961015, end:961036) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AAAATCAGAGAGCCGGGCAGA - AGAGCAGAACAAAGTGGTACA) on contig 9 (3747885 nt) Astart:2849149 Aend:2849170 Bstart:2856692 Bend:2856713 Pairs unsatisfied in pairing logic within a contig. Pair (ACAGCGGAACTTGCTGGAAGG - TCTCTAATACCCTTTGACTAG) on contig 48 (487359 nt) Astart:38347 Aend:38368 Bstart:385627 Bend:385648 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.29 -> -1051406 <- tig#12, B=1463708 nt (start:953599, end:953578) A=2766197 nt (start:117807, end:117786) CALCULATED DISTANCE APART: -1051406 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.409 -> -1019852 <- tig#23, B=1303 nt (start:596, end:575) A=1345436 nt (start:1039256, end:1039235) CALCULATED DISTANCE APART: -1019852 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTTCTTCAAGCCCAAATGGAG - TGAAGATCCAACAATTTCATA) on contig 19 (3531543 nt) Astart:3058728 Aend:3058707 Bstart:3049992 Bend:3049971 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -40662 <- tig#443, A=736718 nt (start:676481, end:676502) B=1213 nt (start:425, end:404) CALCULATED DISTANCE APART: -40662 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260977, end:2260998) B=356404 nt (start:342247, end:342268) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.35 -> -178167 <- tig#168, B=1135475 nt (start:196008, end:195987) A=13020 nt (start:2159, end:2138) CALCULATED DISTANCE APART: -178167 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.6 -> -5416205 <- tig#35, B=6870868 nt (start:4672124, end:4672103) A=1135475 nt (start:764081, end:764060) CALCULATED DISTANCE APART: -5416205 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16410, end:16389) A=1227811 nt (start:7405, end:7384) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AAAAAAAACGCACACTTTTTT - TCCCTAAATGTATCACTCGTC) on contig 7 (3534247 nt) Astart:2256067 Aend:2256046 Bstart:2238715 Bend:2238694 Pairs unsatisfied in distance within a contig. Pair (AAATCTGAACAATCACCATCC - TTCAAACAATCAGTTGAATGT) on contig 41 (667251 nt) Astart:89003 Aend:88982 Bstart:76323 Bend:76344 CALCULATED DISTANCE APART: 12680 Pairs unsatisfied in distance within a contig. Pair (ATTGAGGAAAATGCTAAGCGC - TGGAAATTTTGTCTTTCATCC) on contig 6 (6870868 nt) Astart:1138264 Aend:1138243 Bstart:1129837 Bend:1129858 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#133 -> -41156 <- tig#54, B=34073 nt (start:9323, end:9344) A=625914 nt (start:36406, end:36385) CALCULATED DISTANCE APART: -41156 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TAATTGACATGCTTAGGAATC - TTCAATGTGTATGGCTAGGAT) on contig 9 (3747885 nt) Astart:2849119 Aend:2849140 Bstart:2856722 Bend:2856743 Pairs unsatisfied in distance within a contig. Pair (CTGTTGGGCTGCAGAGAGACA - AAAGTGAAAAAGTACTGACCC) on contig 1 (4853111 nt) Astart:346640 Aend:346661 Bstart:391917 Bend:391896 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig. Pair (TGCAATTCTTCTTACTTCTCT - TATCATGAGAAAAATCATAAA) on contig 71 (271268 nt) Astart:123885 Aend:123864 Bstart:118511 Bend:118532 CALCULATED DISTANCE APART: 5374 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#67 -> -163343 <- tig#51, B=197815 nt (start:180395, end:180416) A=875428 nt (start:165923, end:165902) CALCULATED DISTANCE APART: -163343 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#34 -> -877091 <- tig#r.90, A=1705564 nt (start:813809, end:813830) B=112304 nt (start:106968, end:106989) CALCULATED DISTANCE APART: -877091 < -2000 Pairs unsatisfied in distance within a contig. Pair (TAAATAGTTATAAAAATAAAA - GTCTCTGTTCTTCTCCTCTAA) on contig 15 (3712591 nt) Astart:2103660 Aend:2103639 Bstart:2053747 Bend:2053768 CALCULATED DISTANCE APART: 49913 Pairs unsatisfied in distance within a contig. Pair (TTGTTATAATGTTTAATAGTG - CCACTTCATAATAATACAAAT) on contig 34 (1705564 nt) Astart:679419 Aend:679398 Bstart:664456 Bend:664477 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#119 -> -7707 <- tig#r.49, A=46878 nt (start:31965, end:31986) B=399963 nt (start:387169, end:387190) CALCULATED DISTANCE APART: -7707 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.46 -> -213345 <- tig#51, B=577887 nt (start:160218, end:160197) A=875428 nt (start:73127, end:73106) CALCULATED DISTANCE APART: -213345 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#75 -> -1731898 <- tig#19, A=373953 nt (start:296551, end:296572) B=3531543 nt (start:1674496, end:1674475) CALCULATED DISTANCE APART: -1731898 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#39 -> -500712 <- tig#r.30, A=736718 nt (start:679541, end:679562) B=1050452 nt (start:586917, end:586938) CALCULATED DISTANCE APART: -500712 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -4201 <- tig#r.96, A=262460 nt (start:244191, end:244212) B=91302 nt (start:85370, end:85391) CALCULATED DISTANCE APART: -4201 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:134588, end:134609) B=15068 nt (start:3088, end:3109) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:458879, end:458858) A=1345436 nt (start:26781, end:26760) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459059, end:459038) A=1345436 nt (start:26601, end:26580) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -40662 <- tig#443, A=736718 nt (start:676831, end:676852) B=1213 nt (start:775, end:754) CALCULATED DISTANCE APART: -40662 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCGCGATGAAAGCTTTCGCTG - TTGTCAACCCATGATGACCAA) on contig 1 (4853111 nt) Astart:346795 Aend:346816 Bstart:392072 Bend:392051 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig. Pair (TTCGGAATCCTTTCATCAAAA - GCGAAGTATGGGAGACGCTAG) on contig 6 (6870868 nt) Astart:4412904 Aend:4412925 Bstart:4446872 Bend:4446851 CALCULATED DISTANCE APART: 33968 Pairs unsatisfied in distance within a contig. Pair (AAAAGCTCGTGGAAACTATTT - CTGGGAAGAGAGGTAATAATT) on contig 6 (6870868 nt) Astart:1138784 Aend:1138763 Bstart:1130329 Bend:1130350 CALCULATED DISTANCE APART: 8455 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185804, end:4185783) A=3712591 nt (start:757, end:736) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.86 -> -592847 <- tig#43, B=280231 nt (start:15160, end:15139) A=1235946 nt (start:597687, end:597666) CALCULATED DISTANCE APART: -592847 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GTCTATGTTTGTTTCATCTCT - TATCATATAACTATAATATAT) on contig 19 (3531543 nt) Astart:3060331 Aend:3060310 Bstart:3048392 Bend:3048371 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.74 -> -1813153 <- tig#17, B=238371 nt (start:59106, end:59085) A=1959065 nt (start:1774047, end:1774026) CALCULATED DISTANCE APART: -1813153 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.139 -> -20703 <- tig#109, B=27696 nt (start:21682, end:21661) A=66564 nt (start:19021, end:19000) CALCULATED DISTANCE APART: -20703 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -214292 <- tig#6, A=354284 nt (start:134230, end:134251) B=6870868 nt (start:14238, end:14217) CALCULATED DISTANCE APART: -214292 < -2000 Pairs unsatisfied in distance within a contig. Pair (CAACACAAATCTCAACCGTTC - TTGAGTGTAGATGGCCACACA) on contig 27 (1227811 nt) Astart:434605 Aend:434626 Bstart:450858 Bend:450837 CALCULATED DISTANCE APART: 16253 Pairs unsatisfied in distance within a contig. Pair (AGGAGAAATTCAAAGAGTTTG - TTCTTGCCAGATCCTTTGCCA) on contig 2 (5014909 nt) Astart:1270061 Aend:1270082 Bstart:1284723 Bend:1284702 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#16 -> -1845669 <- tig#270, B=2098954 nt (start:233426, end:233447) A=1880 nt (start:141, end:120) CALCULATED DISTANCE APART: -1845669 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -621133 <- tig#r.66, A=2766197 nt (start:2129498, end:2129519) B=201913 nt (start:197479, end:197500) CALCULATED DISTANCE APART: -621133 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TCAGGTGTCGGATTAATCATG - GTGTGGGACGGCCGACTGCCT) on contig 19 (3531543 nt) Astart:3058653 Aend:3058632 Bstart:3050067 Bend:3050046 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728548, end:728569) A=1096 nt (start:633, end:612) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#35 -> -1127097 <- tig#r.48, A=1135475 nt (start:222607, end:222628) B=487359 nt (start:253130, end:253151) CALCULATED DISTANCE APART: -1127097 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17470, end:17449) A=1227811 nt (start:6345, end:6324) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -1335758 <- tig#4, B=3747885 nt (start:2856827, end:2856848) A=3837743 nt (start:464700, end:464679) CALCULATED DISTANCE APART: -1335758 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#36 -> -890564 <- tig#31, B=855454 nt (start:85214, end:85235) A=976128 nt (start:140324, end:140303) CALCULATED DISTANCE APART: -890564 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#433 -> -944078 <- tig#r.29, A=1238 nt (start:901, end:922) B=1463708 nt (start:499967, end:499988) CALCULATED DISTANCE APART: -944078 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.86 -> -821321 <- tig#33, B=280231 nt (start:15146, end:15125) A=1290487 nt (start:826175, end:826154) CALCULATED DISTANCE APART: -821321 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:458994, end:458973) A=1345436 nt (start:26666, end:26645) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AAAAATAAGAAATAAAAATAA - CGTCTAGCTTGACTGGCCTTC) on contig 7 (3534247 nt) Astart:725278 Aend:725299 Bstart:730883 Bend:730904 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#33 -> -492044 <- tig#32, A=1290487 nt (start:1235597, end:1235618) B=972151 nt (start:457154, end:457133) CALCULATED DISTANCE APART: -492044 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#119 -> -7707 <- tig#r.49, A=46878 nt (start:31920, end:31941) B=399963 nt (start:387214, end:387235) CALCULATED DISTANCE APART: -7707 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#514 -> -39586 <- tig#127, A=1106 nt (start:821, end:842) B=80830 nt (start:59301, end:59280) CALCULATED DISTANCE APART: -39586 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.139 -> -20703 <- tig#109, B=27696 nt (start:21667, end:21646) A=66564 nt (start:19036, end:19015) CALCULATED DISTANCE APART: -20703 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.257 -> -2902765 <- tig#8, B=1995 nt (start:1191, end:1170) A=5070776 nt (start:2921574, end:2921553) CALCULATED DISTANCE APART: -2902765 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260657, end:2260678) B=356404 nt (start:342567, end:342588) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282667, end:282688) B=2196 nt (start:848, end:827) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TGCAGCTCCATTTGCAGCTTT - TGAGGAAATTAAGAAACAAAA) on contig 15 (3712591 nt) Astart:1716868 Aend:1716889 Bstart:1731150 Bend:1731171 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#37 -> -738605 <- tig#r.53, A=853709 nt (start:109424, end:109445) B=354284 nt (start:339964, end:339985) CALCULATED DISTANCE APART: -738605 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.6 -> -33388 <- tig#115, B=6870868 nt (start:12343, end:12322) A=66709 nt (start:41045, end:41024) CALCULATED DISTANCE APART: -33388 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CCTTGCTTCGTGGTTATTTAC - TTCAAAATTGTCCGCAAATAT) on contig 15 (3712591 nt) Astart:1718858 Aend:1718879 Bstart:1729160 Bend:1729181 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#48 -> -585449 <- tig#46, A=487359 nt (start:42073, end:42094) B=577887 nt (start:160163, end:160142) CALCULATED DISTANCE APART: -585449 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.38 -> -1489351 <- tig#41, B=1143067 nt (start:1037374, end:1037353) A=667251 nt (start:471977, end:471956) CALCULATED DISTANCE APART: -1489351 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -621133 <- tig#r.66, A=2766197 nt (start:2129638, end:2129659) B=201913 nt (start:197339, end:197360) CALCULATED DISTANCE APART: -621133 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3583 <- tig#26, B=1171658 nt (start:1171518, end:1171539) A=1332708 nt (start:23443, end:23422) CALCULATED DISTANCE APART: -3583 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#37 -> -1821163 <- tig#25, A=853709 nt (start:114381, end:114402) B=1290536 nt (start:1101835, end:1101814) CALCULATED DISTANCE APART: -1821163 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4186179, end:4186158) A=3712591 nt (start:382, end:361) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459999, end:459978) A=1345436 nt (start:25661, end:25640) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GACCCTAGTATTTGTTTCCTG - ACGAAATCTTAATAAAAGACG) on contig 19 (3531543 nt) Astart:3058633 Aend:3058612 Bstart:3050087 Bend:3050066 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -214288 <- tig#6, A=354284 nt (start:132859, end:132880) B=6870868 nt (start:12863, end:12842) CALCULATED DISTANCE APART: -214288 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33819, end:33798) A=855454 nt (start:18630, end:18609) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#47 -> -293198 <- tig#6, A=471458 nt (start:172293, end:172314) B=6870868 nt (start:14033, end:14012) CALCULATED DISTANCE APART: -293198 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#40 -> -506904 <- tig#r.79, A=668174 nt (start:201427, end:201448) B=136600 nt (start:76443, end:76464) CALCULATED DISTANCE APART: -506904 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#52 -> -356009 <- tig#3, B=356404 nt (start:22, end:43) A=3889482 nt (start:19627, end:19606) CALCULATED DISTANCE APART: -356009 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460579, end:460558) A=1345436 nt (start:25081, end:25060) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730852, end:730873) B=3531543 nt (start:3200426, end:3200405) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:458829, end:458808) A=1345436 nt (start:26831, end:26810) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#37 -> -1821163 <- tig#25, A=853709 nt (start:114461, end:114482) B=1290536 nt (start:1101915, end:1101894) CALCULATED DISTANCE APART: -1821163 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185624, end:4185603) A=3712591 nt (start:937, end:916) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082652, end:2082673) B=976128 nt (start:960870, end:960891) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730512, end:730533) B=3531543 nt (start:3200086, end:3200065) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.42 -> -1433157 <- tig#20, B=659641 nt (start:2378, end:2357) A=2328057 nt (start:1450779, end:1450758) CALCULATED DISTANCE APART: -1433157 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCTTATGCATTTTCTTTATAA - CAGGTGCCAGATAACAATGAG) on contig 6 (6870868 nt) Astart:1138284 Aend:1138263 Bstart:1129857 Bend:1129878 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig. Pair (TCGTATCCGACGTTGAGGCGA - ACTTCAGATCTCATATTTTAA) on contig 5 (3689108 nt) Astart:1171792 Aend:1171813 Bstart:1186928 Bend:1186907 CALCULATED DISTANCE APART: 15136 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.29 -> -1051406 <- tig#12, B=1463708 nt (start:953644, end:953623) A=2766197 nt (start:117762, end:117741) CALCULATED DISTANCE APART: -1051406 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#11 -> -1263394 <- tig#3, B=4628067 nt (start:3649667, end:3649688) A=3889482 nt (start:304994, end:304973) CALCULATED DISTANCE APART: -1263394 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459444, end:459423) A=1345436 nt (start:26216, end:26195) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig. Pair (GACAGTTCGAGACGATGGTTT - TCTCCTTCTTGGTAGTAGTTG) on contig 1 (4853111 nt) Astart:346720 Aend:346741 Bstart:391997 Bend:391976 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10168, end:10147) A=2766197 nt (start:2151395, end:2151374) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig. Pair (AATAGATTTGTATGAGGATGT - TGAAACAAGTCATTATCTGAT) on contig 27 (1227811 nt) Astart:434675 Aend:434696 Bstart:450928 Bend:450907 CALCULATED DISTANCE APART: 16253 Pairs unsatisfied in pairing logic within a contig. Pair (CAACAAGATGTATATATATAG - CAGCAAACAGAGATTAGATAG) on contig 19 (3531543 nt) Astart:3058888 Aend:3058867 Bstart:3049832 Bend:3049811 Pairs unsatisfied in distance within a contig. Pair (TGAGTAATCTATGCATTTGTA - CTACTCGTCGACAATCACATA) on contig 2 (5014909 nt) Astart:1269341 Aend:1269362 Bstart:1284003 Bend:1283982 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260227, end:2260248) B=356404 nt (start:342997, end:343018) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3583 <- tig#26, B=1171658 nt (start:1171273, end:1171294) A=1332708 nt (start:23198, end:23177) CALCULATED DISTANCE APART: -3583 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#92 -> -2121626 <- tig#16, A=101136 nt (start:3320, end:3341) B=2098954 nt (start:2043810, end:2043789) CALCULATED DISTANCE APART: -2121626 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:458639, end:458618) A=1345436 nt (start:27021, end:27000) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTTTCACAACCTGTATGCAAC - TGTTTTGGAAGTGTATACATG) on contig 10 (3047199 nt) Astart:790154 Aend:790133 Bstart:766414 Bend:766435 CALCULATED DISTANCE APART: 23740 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.409 -> -1019852 <- tig#23, B=1303 nt (start:636, end:615) A=1345436 nt (start:1039216, end:1039195) CALCULATED DISTANCE APART: -1019852 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.6 -> -4769507 <- tig#49, B=6870868 nt (start:4745977, end:4745956) A=399963 nt (start:43530, end:43509) CALCULATED DISTANCE APART: -4769507 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#3 -> -3618470 <- tig#27, B=3889482 nt (start:316509, end:316530) A=1227811 nt (start:65497, end:65476) CALCULATED DISTANCE APART: -3618470 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#7 -> -3853079 <- tig#36, A=3534247 nt (start:146019, end:146040) B=855454 nt (start:484851, end:484830) CALCULATED DISTANCE APART: -3853079 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#73 -> -397247 <- tig#43, A=171056 nt (start:19311, end:19332) B=1235946 nt (start:265502, end:265481) CALCULATED DISTANCE APART: -397247 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730567, end:730588) B=3531543 nt (start:3200141, end:3200120) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.328 -> -54701 <- tig#102, B=1508 nt (start:1161, end:1140) A=83426 nt (start:73540, end:73519) CALCULATED DISTANCE APART: -54701 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CGTTACTTTTGGCTTTTTCTT - TTCATATTTTCATACATGCTC) on contig 19 (3531543 nt) Astart:3058743 Aend:3058722 Bstart:3049977 Bend:3049956 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:1705, end:1726) A=258385 nt (start:241, end:220) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATGTTCTTTTTTTTCTTCGTA - GTGTCAATCACGAATCCGAAA) on contig 19 (3531543 nt) Astart:3059616 Aend:3059595 Bstart:3049107 Bend:3049086 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#39 -> -500712 <- tig#r.30, A=736718 nt (start:679526, end:679547) B=1050452 nt (start:586932, end:586953) CALCULATED DISTANCE APART: -500712 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -40662 <- tig#443, A=736718 nt (start:677056, end:677077) B=1213 nt (start:1000, end:979) CALCULATED DISTANCE APART: -40662 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#48 -> -3151847 <- tig#12, B=487359 nt (start:40511, end:40532) A=2766197 nt (start:2724999, end:2724978) CALCULATED DISTANCE APART: -3151847 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17540, end:17519) A=1227811 nt (start:6275, end:6254) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#15 -> -1474518 <- tig#r.32, A=3712591 nt (start:2617086, end:2617107) B=972151 nt (start:573138, end:573159) CALCULATED DISTANCE APART: -1474518 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#46 -> -523088 <- tig#r.48, A=577887 nt (start:136141, end:136162) B=487359 nt (start:386017, end:386038) CALCULATED DISTANCE APART: -523088 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2640, end:2661) A=258385 nt (start:1176, end:1155) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219266, end:4219245) A=2598 nt (start:2355, end:2334) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGAAACCGAAGAAAGCAGTAC - GCTTGCACTTCTTCTTATGAG) on contig 15 (3712591 nt) Astart:1716698 Aend:1716719 Bstart:1731320 Bend:1731341 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.521 -> -111708 <- tig#63, B=1100 nt (start:512, end:491) A=274372 nt (start:131196, end:131175) CALCULATED DISTANCE APART: -111708 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#53 -> -18530 <- tig#126, B=354284 nt (start:325784, end:325805) A=40796 nt (start:10030, end:10009) CALCULATED DISTANCE APART: -18530 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -1335763 <- tig#4, B=3747885 nt (start:2857557, end:2857578) A=3837743 nt (start:465435, end:465414) CALCULATED DISTANCE APART: -1335763 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#119 -> -7707 <- tig#r.49, A=46878 nt (start:31925, end:31946) B=399963 nt (start:387209, end:387230) CALCULATED DISTANCE APART: -7707 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135383, end:135404) B=15068 nt (start:2293, end:2314) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#33 -> -492044 <- tig#32, A=1290487 nt (start:1235932, end:1235953) B=972151 nt (start:457489, end:457468) CALCULATED DISTANCE APART: -492044 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TGTTAAATAGACATTCCGAGT - TCGTATCTTTAAACATTTATG) on contig 19 (3531543 nt) Astart:3058178 Aend:3058157 Bstart:3050542 Bend:3050521 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4186049, end:4186028) A=3712591 nt (start:512, end:491) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -621133 <- tig#r.66, A=2766197 nt (start:2129583, end:2129604) B=201913 nt (start:197394, end:197415) CALCULATED DISTANCE APART: -621133 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136303, end:136324) B=15068 nt (start:1373, end:1394) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATGTGAAGGTGAGTATCTATG - TAAAACCTAGACGAAATCTCT) on contig 41 (667251 nt) Astart:88843 Aend:88822 Bstart:76163 Bend:76184 CALCULATED DISTANCE APART: 12680 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#74 -> -453293 <- tig#r.47, A=238371 nt (start:73393, end:73414) B=471458 nt (start:163143, end:163164) CALCULATED DISTANCE APART: -453293 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#8 -> -1156567 <- tig#r.35, A=5070776 nt (start:4608257, end:4608278) B=1135475 nt (start:421427, end:421448) CALCULATED DISTANCE APART: -1156567 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -1168778 <- tig#384, A=5070776 nt (start:3883245, end:3883266) B=1359 nt (start:1247, end:1226) CALCULATED DISTANCE APART: -1168778 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CTCGGAGCTCGTGGCTCTTCT - TTTGTTTCTTCTTATGGGCAC) on contig 15 (3712591 nt) Astart:1718453 Aend:1718474 Bstart:1729565 Bend:1729586 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:134878, end:134899) B=15068 nt (start:2798, end:2819) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459449, end:459428) A=1345436 nt (start:26211, end:26190) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GAAAATCATGATTAGGTTAAG - TAGGTTCGATGTGTGGACCAA) on contig 15 (3712591 nt) Astart:1719073 Aend:1719094 Bstart:1728945 Bend:1728966 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#18 -> -342356 <- tig#r.57, A=1738864 nt (start:1540484, end:1540505) B=258385 nt (start:94409, end:94430) CALCULATED DISTANCE APART: -342356 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#86 -> -71390 <- tig#135, B=280231 nt (start:222708, end:222729) A=39094 nt (start:33867, end:33846) CALCULATED DISTANCE APART: -71390 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TAGATTATTTACAAATTAATA - GCTACGCATAAGACAAGTTAA) on contig 19 (3531543 nt) Astart:3060496 Aend:3060475 Bstart:3048227 Bend:3048206 Pairs unsatisfied in distance within a contig. Pair (CAGATTCTTTAAAATGGATTG - TATGACCTTCTTGTTTCACTC) on contig 6 (6870868 nt) Astart:4411834 Aend:4411855 Bstart:4445788 Bend:4445767 CALCULATED DISTANCE APART: 33954 Pairs unsatisfied in distance within a contig. Pair (ACCTAATGGGAGTGGAAAGAG - ACAGTGTATTCTTGATTCAAC) on contig 2 (5014909 nt) Astart:1268626 Aend:1268647 Bstart:1283288 Bend:1283267 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.34 -> -1882354 <- tig#86, B=1705564 nt (start:1679307, end:1679286) A=280231 nt (start:223047, end:223026) CALCULATED DISTANCE APART: -1882354 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4186059, end:4186038) A=3712591 nt (start:502, end:481) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#129 -> -216394 <- tig#84, A=39603 nt (start:31, end:52) B=197079 nt (start:196822, end:196801) CALCULATED DISTANCE APART: -216394 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#129 -> -29784 <- tig#167, A=39603 nt (start:31, end:52) B=25236 nt (start:10212, end:10191) CALCULATED DISTANCE APART: -29784 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#129 -> -1698870 <- tig#34, A=39603 nt (start:31, end:52) B=1705564 nt (start:1679298, end:1679277) CALCULATED DISTANCE APART: -1698870 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#129 -> -29196 <- tig#r.132, A=39603 nt (start:31, end:52) B=34686 nt (start:25062, end:25083) CALCULATED DISTANCE APART: -29196 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -1335675 <- tig#4, B=3747885 nt (start:2858822, end:2858843) A=3837743 nt (start:466612, end:466591) CALCULATED DISTANCE APART: -1335675 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTCTCTGCCAATTCAATGTGA - AGCCAAATTTAATTTCATGTT) on contig 15 (3712591 nt) Astart:3350390 Aend:3350411 Bstart:3375378 Bend:3375357 CALCULATED DISTANCE APART: 24988 Pairs unsatisfied in pairing logic within a contig. Pair (TTCGAAAACAAATACATATAA - TACAGATTTCACAGAATAGTG) on contig 19 (3531543 nt) Astart:3060266 Aend:3060245 Bstart:3048457 Bend:3048436 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#118 -> -33564 <- tig#97, B=66247 nt (start:37567, end:37588) A=91050 nt (start:24884, end:24863) CALCULATED DISTANCE APART: -33564 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.53 -> -311392 <- tig#143, B=354284 nt (start:325805, end:325784) A=24293 nt (start:5587, end:5566) CALCULATED DISTANCE APART: -311392 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#23 -> -1326875 <- tig#143, B=1345436 nt (start:4148, end:4169) A=24293 nt (start:5587, end:5566) CALCULATED DISTANCE APART: -1326875 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460899, end:460878) A=1345436 nt (start:24761, end:24740) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.29 -> -1051406 <- tig#12, B=1463708 nt (start:953549, end:953528) A=2766197 nt (start:117857, end:117836) CALCULATED DISTANCE APART: -1051406 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTAACACATATACCCTCTTAG - AACACAGAGATGAATGAAACA) on contig 37 (853709 nt) Astart:838549 Aend:838528 Bstart:823044 Bend:823065 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#283 -> -3818458 <- tig#2, A=1768 nt (start:378, end:399) B=5014909 nt (start:3837068, end:3837047) CALCULATED DISTANCE APART: -3818458 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGGATACACTTCGTACTGGTT - TTTAATTAGCATGAACAATGA) on contig 37 (853709 nt) Astart:538142 Aend:538163 Bstart:550794 Bend:550773 CALCULATED DISTANCE APART: 12652 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.257 -> -2902765 <- tig#8, B=1995 nt (start:1066, end:1045) A=5070776 nt (start:2921699, end:2921678) CALCULATED DISTANCE APART: -2902765 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.101 -> -46850 <- tig#107, B=84691 nt (start:24204, end:24183) A=68734 nt (start:42646, end:42625) CALCULATED DISTANCE APART: -46850 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185544, end:4185523) A=3712591 nt (start:1017, end:996) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#34 -> -1056226 <- tig#r.65, A=1705564 nt (start:662346, end:662367) B=286124 nt (start:253116, end:253137) CALCULATED DISTANCE APART: -1056226 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AATCAATACCAAAAATAAGAA - GACTGGCCTTCTCTTGTTTAC) on contig 7 (3534247 nt) Astart:725268 Aend:725289 Bstart:730893 Bend:730914 Pairs unsatisfied in distance within a contig. Pair (GGTGTATTATGTAGCTGATCC - TCATGAAAGAACATTTCCATT) on contig 30 (1050452 nt) Astart:649959 Aend:649980 Bstart:665725 Bend:665704 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in distance within a contig. Pair (GATGAGCCATACATATTGGCG - CATGATGTTGAAAGAATTTGT) on contig 30 (1050452 nt) Astart:649924 Aend:649945 Bstart:665690 Bend:665669 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#1 -> -4220727 <- tig#r.10, A=4853111 nt (start:1841169, end:1841190) B=3047199 nt (start:1818414, end:1818435) CALCULATED DISTANCE APART: -4220727 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.38 -> -1426764 <- tig#29, B=1143067 nt (start:1039729, end:1039708) A=1463708 nt (start:407035, end:407014) CALCULATED DISTANCE APART: -1426764 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -40662 <- tig#443, A=736718 nt (start:676421, end:676442) B=1213 nt (start:365, end:344) CALCULATED DISTANCE APART: -40662 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.7 -> -2465335 <- tig#3, B=3534247 nt (start:571950, end:571929) A=3889482 nt (start:1913385, end:1913364) CALCULATED DISTANCE APART: -2465335 < -2000 Pairs unsatisfied in distance within a contig. Pair (CGGGCATTTTCGTGATTTGGG - TAATATAGCCCAAATCACGAA) on contig 7 (3534247 nt) Astart:3500286 Aend:3500307 Bstart:3500315 Bend:3500294 CALCULATED DISTANCE APART: 29 Pairs unsatisfied in distance within a contig. Pair (CGGGCATTTTCGTGATTTGGG - GTAATATAGCCCAAATCACGA) on contig 7 (3534247 nt) Astart:3500286 Aend:3500307 Bstart:3500316 Bend:3500295 CALCULATED DISTANCE APART: 30 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#433 -> -944078 <- tig#r.29, A=1238 nt (start:296, end:317) B=1463708 nt (start:500572, end:500593) CALCULATED DISTANCE APART: -944078 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#28 -> -913193 <- tig#475, A=1171658 nt (start:238650, end:238671) B=1157 nt (start:185, end:164) CALCULATED DISTANCE APART: -913193 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TGTGAATGATGATACAACCTT - TAAATAGATTTTTAAGACATT) on contig 15 (3712591 nt) Astart:1717578 Aend:1717599 Bstart:1730440 Bend:1730461 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.58 -> -1866109 <- tig#19, B=374416 nt (start:14226, end:14205) A=3531543 nt (start:1871883, end:1871862) CALCULATED DISTANCE APART: -1866109 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#5 -> -3215286 <- tig#31, B=3689108 nt (start:603096, end:603117) A=976128 nt (start:149274, end:149253) CALCULATED DISTANCE APART: -3215286 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTCTACGGTGGATGATAGATC - ACGTTTCTTAATTAGTAGTAG) on contig 15 (3712591 nt) Astart:1792136 Aend:1792115 Bstart:2056197 Bend:2056218 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#207 -> -1387873 <- tig#19, B=5890 nt (start:429, end:450) A=3531543 nt (start:1402412, end:1402391) CALCULATED DISTANCE APART: -1387873 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:1795, end:1816) A=258385 nt (start:331, end:310) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259667, end:2259688) B=356404 nt (start:343557, end:343578) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -621133 <- tig#r.66, A=2766197 nt (start:2129333, end:2129354) B=201913 nt (start:197644, end:197665) CALCULATED DISTANCE APART: -621133 < -2000 Pairs unsatisfied in distance within a contig. Pair (TAATAACCTAAAAAAACCAAT - TTTAGAGCCGGAATTCATATT) on contig 5 (3689108 nt) Astart:1178387 Aend:1178366 Bstart:1163253 Bend:1163274 CALCULATED DISTANCE APART: 15134 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -491503 <- tig#7, B=1171658 nt (start:875237, end:875258) A=3534247 nt (start:215082, end:215061) CALCULATED DISTANCE APART: -491503 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459864, end:459843) A=1345436 nt (start:25796, end:25775) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#5 -> -2458496 <- tig#r.4, A=3689108 nt (start:1973649, end:1973670) B=3837743 nt (start:3074706, end:3074727) CALCULATED DISTANCE APART: -2458496 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#38 -> -891893 <- tig#35, B=1143067 nt (start:995015, end:995036) A=1135475 nt (start:763841, end:763820) CALCULATED DISTANCE APART: -891893 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.38 -> -1310113 <- tig#33, B=1143067 nt (start:1039459, end:1039438) A=1290487 nt (start:290654, end:290633) CALCULATED DISTANCE APART: -1310113 < -2000 Pairs unsatisfied in distance within a contig. Pair (AATCAAACGTTTAATTGTTTC - TTTTATGGGACCAGAAGGAGG) on contig 14 (2271162 nt) Astart:1739912 Aend:1739933 Bstart:2002484 Bend:2002463 CALCULATED DISTANCE APART: 262572 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#34 -> -1107961 <- tig#79, A=1705564 nt (start:661446, end:661467) B=136600 nt (start:83843, end:83822) CALCULATED DISTANCE APART: -1107961 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17420, end:17399) A=1227811 nt (start:6395, end:6374) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -1263675 <- tig#29, A=736718 nt (start:407162, end:407183) B=1463708 nt (start:954119, end:954098) CALCULATED DISTANCE APART: -1263675 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGAACAAGATATATTCTATGG - TGTTGTGTCCTAATGAGAACT) on contig 15 (3712591 nt) Astart:1717898 Aend:1717919 Bstart:1730120 Bend:1730141 Pairs unsatisfied in distance within a contig. Pair (TGTGTGAGTGCGTACATTTGG - GAGTCGCTAAAACACTTGAAG) on contig 30 (1050452 nt) Astart:650359 Aend:650380 Bstart:666125 Bend:666104 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#265 -> -3126344 <- tig#4, A=1946 nt (start:1701, end:1722) B=3837743 nt (start:3146099, end:3146078) CALCULATED DISTANCE APART: -3126344 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGTCTGAATTTTATAGTATAG - CGACACCCAATTGGTGTCGCT) on contig 41 (667251 nt) Astart:88473 Aend:88452 Bstart:75793 Bend:75814 CALCULATED DISTANCE APART: 12680 Pairs unsatisfied in distance within a contig. Pair (CAGTAATATAAGTCTGAATTT - TTGGTGTCGCTAACACCGAGC) on contig 41 (667251 nt) Astart:88483 Aend:88462 Bstart:75803 Bend:75824 CALCULATED DISTANCE APART: 12680 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#119 -> -7707 <- tig#r.49, A=46878 nt (start:31855, end:31876) B=399963 nt (start:387279, end:387300) CALCULATED DISTANCE APART: -7707 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#4 -> -7436980 <- tig#r.8, A=3837743 nt (start:690686, end:690707) B=5070776 nt (start:760853, end:760874) CALCULATED DISTANCE APART: -7436980 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:458724, end:458703) A=1345436 nt (start:26936, end:26915) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#12 -> -167604 <- tig#557, B=2766197 nt (start:2579519, end:2579540) A=1050 nt (start:926, end:905) CALCULATED DISTANCE APART: -167604 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10093, end:10072) A=2766197 nt (start:2151470, end:2151449) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:134583, end:134604) B=15068 nt (start:3093, end:3114) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185729, end:4185708) A=3712591 nt (start:832, end:811) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#433 -> -944078 <- tig#r.29, A=1238 nt (start:616, end:637) B=1463708 nt (start:500252, end:500273) CALCULATED DISTANCE APART: -944078 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.74 -> -1813119 <- tig#17, B=238371 nt (start:59071, end:59050) A=1959065 nt (start:1774048, end:1774027) CALCULATED DISTANCE APART: -1813119 < -2000 Pairs unsatisfied in distance within a contig. Pair (GAGTTTAGCTGATGTTGAGAA - AGAACAACTAACTAAAAACGT) on contig 37 (853709 nt) Astart:538242 Aend:538263 Bstart:550910 Bend:550889 CALCULATED DISTANCE APART: 12668 Pairs unsatisfied in pairing logic within a contig. Pair (ACACAAAAGAAACTCTCACAT - TCCACTCTTGGTTGTTTAATC) on contig 15 (3712591 nt) Astart:1716528 Aend:1716549 Bstart:1731490 Bend:1731511 Pairs unsatisfied in distance within a contig. Pair (ACTGTAAGATATGATGGGTTA - CCAAAATTTCTTTCAAAGTAT) on contig 5 (3689108 nt) Astart:1169817 Aend:1169838 Bstart:1184952 Bend:1184931 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#81 -> -2917514 <- tig#r.7, A=258617 nt (start:241299, end:241320) B=3534247 nt (start:614051, end:614072) CALCULATED DISTANCE APART: -2917514 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219086, end:4219065) A=2598 nt (start:2535, end:2514) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259542, end:2259563) B=356404 nt (start:343682, end:343703) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGAGTGAAAATGGATGAGAGT - TTTCACGACTGTTAGCAAACG) on contig 2 (5014909 nt) Astart:1269831 Aend:1269852 Bstart:1284493 Bend:1284472 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.35 -> -676591 <- tig#2, B=1135475 nt (start:599335, end:599314) A=5014909 nt (start:97256, end:97235) CALCULATED DISTANCE APART: -676591 < -2000 Pairs unsatisfied in distance within a contig. Pair (CCTGCAAAACCTGTAAAACAT - GGGGCAAAGCAAAATACCCAG) on contig 15 (3712591 nt) Astart:3349985 Aend:3350006 Bstart:3374973 Bend:3374952 CALCULATED DISTANCE APART: 24988 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.1 -> -4590186 <- tig#16, B=4853111 nt (start:3207937, end:3207916) A=2098954 nt (start:1402249, end:1402228) CALCULATED DISTANCE APART: -4590186 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#433 -> -944078 <- tig#r.29, A=1238 nt (start:571, end:592) B=1463708 nt (start:500297, end:500318) CALCULATED DISTANCE APART: -944078 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.47 -> -199670 <- tig#2, B=471458 nt (start:122319, end:122298) A=5014909 nt (start:97351, end:97330) CALCULATED DISTANCE APART: -199670 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#80 -> -36969 <- tig#143, A=191116 nt (start:148704, end:148725) B=24293 nt (start:14557, end:14536) CALCULATED DISTANCE APART: -36969 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#30 -> -340635 <- tig#93, A=1050452 nt (start:834246, end:834267) B=152036 nt (start:144429, end:144408) CALCULATED DISTANCE APART: -340635 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#9 -> -3401512 <- tig#r.107, A=3747885 nt (start:358033, end:358054) B=68734 nt (start:37074, end:37095) CALCULATED DISTANCE APART: -3401512 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#39 -> -500696 <- tig#r.30, A=736718 nt (start:679386, end:679407) B=1050452 nt (start:587088, end:587109) CALCULATED DISTANCE APART: -500696 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.29 -> -1051406 <- tig#12, B=1463708 nt (start:953559, end:953538) A=2766197 nt (start:117847, end:117826) CALCULATED DISTANCE APART: -1051406 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATCTACATATTACTGGTTAAA - TTCTGGTTGCCCCAGTACCCA) on contig 14 (2271162 nt) Astart:1853284 Aend:1853263 Bstart:2002534 Bend:2002513 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185859, end:4185838) A=3712591 nt (start:702, end:681) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.75 -> -390498 <- tig#78, B=373953 nt (start:279672, end:279651) A=184063 nt (start:130826, end:130805) CALCULATED DISTANCE APART: -390498 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCTTCAAAACCGAAGATGACA - GATAAATCCGTTTGTGGAGTA) on contig 19 (3531543 nt) Astart:1348179 Aend:1348158 Bstart:1311034 Bend:1311055 CALCULATED DISTANCE APART: 37145 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#127 -> -57440 <- tig#17, B=80830 nt (start:63115, end:63136) A=1959065 nt (start:59725, end:59704) CALCULATED DISTANCE APART: -57440 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#129 -> -26147 <- tig#167, A=39603 nt (start:3666, end:3687) B=25236 nt (start:10210, end:10189) CALCULATED DISTANCE APART: -26147 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#3 -> -3661461 <- tig#r.56, A=3889482 nt (start:401869, end:401890) B=262460 nt (start:68612, end:68633) CALCULATED DISTANCE APART: -3661461 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TGAAGAACTACTGTAAATTTC - CAACTCTATAGTCTCCTTGTG) on contig 4 (3837743 nt) Astart:2357926 Aend:2357947 Bstart:2360136 Bend:2360157 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#47 -> -583213 <- tig#r.69, A=471458 nt (start:9943, end:9964) B=186132 nt (start:44434, end:44455) CALCULATED DISTANCE APART: -583213 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAGTTCTCAAATATCAAATTT - CAATGTTGACATTTTATATCA) on contig 13 (2650694 nt) Astart:1947140 Aend:1947161 Bstart:1962788 Bend:1962767 CALCULATED DISTANCE APART: 15648 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2415, end:2436) A=258385 nt (start:951, end:930) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig. Pair (TATACAAAGAGTGTTAAAGGA - CGCATCGCTGCATCGAGGCAA) on contig 131 (36503 nt) Astart:30751 Aend:30730 Bstart:14382 Bend:14403 CALCULATED DISTANCE APART: 16369 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#52 -> -356009 <- tig#3, B=356404 nt (start:107, end:128) A=3889482 nt (start:19712, end:19691) CALCULATED DISTANCE APART: -356009 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282352, end:282373) B=2196 nt (start:533, end:512) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3583 <- tig#26, B=1171658 nt (start:1171033, end:1171054) A=1332708 nt (start:22958, end:22937) CALCULATED DISTANCE APART: -3583 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#38 -> -891893 <- tig#35, B=1143067 nt (start:994945, end:994966) A=1135475 nt (start:763771, end:763750) CALCULATED DISTANCE APART: -891893 < -2000 Pairs unsatisfied in distance within a contig. Pair (TACACTATTTACTTAGAGTGA - AAAAATTATGAATTAGTCAAT) on contig 37 (853709 nt) Astart:838579 Aend:838558 Bstart:823074 Bend:823095 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282267, end:282288) B=2196 nt (start:448, end:427) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig. Pair (GCTAGTTTGAATTGCTCTTGC - TAAATTTCCCTAAAGTCTCTC) on contig 2 (5014909 nt) Astart:1268516 Aend:1268537 Bstart:1283178 Bend:1283157 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#25 -> -984349 <- tig#r.30, A=1290536 nt (start:1015416, end:1015437) B=1050452 nt (start:321223, end:321244) CALCULATED DISTANCE APART: -984349 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -40662 <- tig#443, A=736718 nt (start:676566, end:676587) B=1213 nt (start:510, end:489) CALCULATED DISTANCE APART: -40662 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATATATGAATAAGAAAGAGAA - AATTATGGGATGATTAACAAA) on contig 7 (3534247 nt) Astart:2256912 Aend:2256891 Bstart:2237871 Bend:2237850 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#57 -> -3231864 <- tig#7, A=258385 nt (start:255984, end:256005) B=3534247 nt (start:3249463, end:3249442) CALCULATED DISTANCE APART: -3231864 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.46 -> -15055 <- tig#3, B=577887 nt (start:15663, end:15642) A=3889482 nt (start:19392, end:19371) CALCULATED DISTANCE APART: -15055 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219401, end:4219380) A=2598 nt (start:2220, end:2199) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16980, end:16959) A=1227811 nt (start:6835, end:6814) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.45 -> -5709644 <- tig#6, B=528133 nt (start:188613, end:188592) A=6870868 nt (start:5541031, end:5541010) CALCULATED DISTANCE APART: -5709644 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#6 -> -6284042 <- tig#42, A=6870868 nt (start:994767, end:994788) B=659641 nt (start:427941, end:427920) CALCULATED DISTANCE APART: -6284042 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219256, end:4219235) A=2598 nt (start:2365, end:2344) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig. Pair (AACAAAAGCAGATTGTGCAAG - AATTGCACGTTCAAAAGGAGA) on contig 6 (6870868 nt) Astart:1137744 Aend:1137723 Bstart:1129317 Bend:1129338 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.103 -> -86798 <- tig#165, B=211876 nt (start:104667, end:104646) A=13843 nt (start:2131, end:2110) CALCULATED DISTANCE APART: -86798 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -1335763 <- tig#4, B=3747885 nt (start:2857652, end:2857673) A=3837743 nt (start:465530, end:465509) CALCULATED DISTANCE APART: -1335763 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136678, end:136699) B=15068 nt (start:998, end:1019) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#54 -> -612625 <- tig#49, A=625914 nt (start:37081, end:37102) B=399963 nt (start:43792, end:43771) CALCULATED DISTANCE APART: -612625 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17140, end:17119) A=1227811 nt (start:6675, end:6654) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#9 -> -2729019 <- tig#69, A=3747885 nt (start:1133985, end:1134006) B=186132 nt (start:135119, end:135098) CALCULATED DISTANCE APART: -2729019 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#48 -> -585449 <- tig#46, A=487359 nt (start:41988, end:42009) B=577887 nt (start:160078, end:160057) CALCULATED DISTANCE APART: -585449 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#9 -> -3369808 <- tig#22, A=3747885 nt (start:358198, end:358219) B=1636463 nt (start:121, end:100) CALCULATED DISTANCE APART: -3369808 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3583 <- tig#26, B=1171658 nt (start:1171278, end:1171299) A=1332708 nt (start:23203, end:23182) CALCULATED DISTANCE APART: -3583 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CTTCGTTTAGAGCCATGCAGT - TAACATAAACTAATATCTTGA) on contig 15 (3712591 nt) Astart:1717088 Aend:1717109 Bstart:1730930 Bend:1730951 Pairs unsatisfied in pairing logic within a contig. Pair (CCTTTGCTTTTTTTGCTTCTG - GGAGCCACCGCTGGTAAGCTC) on contig 8 (5070776 nt) Astart:792494 Aend:792515 Bstart:760703 Bend:760724 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#37 -> -738300 <- tig#r.53, A=853709 nt (start:108309, end:108330) B=354284 nt (start:341384, end:341405) CALCULATED DISTANCE APART: -738300 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#30 -> -720582 <- tig#32, B=1050452 nt (start:900037, end:900058) A=972151 nt (start:590167, end:590146) CALCULATED DISTANCE APART: -720582 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.86 -> -231677 <- tig#329, B=280231 nt (start:251303, end:251282) A=1505 nt (start:374, end:353) CALCULATED DISTANCE APART: -231677 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTTGTTTACAAATTGTTTCTT - CCTATATGGAGAGAACCTTGC) on contig 5 (3689108 nt) Astart:1169552 Aend:1169573 Bstart:1184687 Bend:1184666 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#25 -> -666259 <- tig#2, B=1290536 nt (start:852912, end:852933) A=5014909 nt (start:248635, end:248614) CALCULATED DISTANCE APART: -666259 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -2461734 <- tig#10, A=736718 nt (start:310613, end:310634) B=3047199 nt (start:2055629, end:2055608) CALCULATED DISTANCE APART: -2461734 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCTGAAATTTAAGGCTTGAAA - CAATTCCCTGCAATCGCTCAG) on contig 2 (5014909 nt) Astart:1269426 Aend:1269447 Bstart:1284088 Bend:1284067 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig. Pair (TGCCGACGAGGCTAAATTCAT - TGGCCAAAGTGGTTTTACCAA) on contig 2 (5014909 nt) Astart:1269951 Aend:1269972 Bstart:1284613 Bend:1284592 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#496 -> -5522520 <- tig#6, B=1123 nt (start:139, end:160) A=6870868 nt (start:5541536, end:5541515) CALCULATED DISTANCE APART: -5522520 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGCAAGTGAAATGGAGACCAA - TGCATTTTCTGATTAAATTGC) on contig 6 (6870868 nt) Astart:1137729 Aend:1137708 Bstart:1129302 Bend:1129323 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.54 -> -242536 <- tig#53, B=625914 nt (start:94420, end:94399) A=354284 nt (start:168116, end:168095) CALCULATED DISTANCE APART: -242536 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728353, end:728374) A=1096 nt (start:438, end:417) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATTGAGCCGAATGATTACCTT - CAGTCTTGAGAAAGTAAAAGG) on contig 15 (3712591 nt) Astart:3350365 Aend:3350386 Bstart:3375353 Bend:3375332 CALCULATED DISTANCE APART: 24988 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#9 -> -3369808 <- tig#22, A=3747885 nt (start:358258, end:358279) B=1636463 nt (start:181, end:160) CALCULATED DISTANCE APART: -3369808 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10443, end:10422) A=2766197 nt (start:2151120, end:2151099) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTTGTGGCTAAACAAAGTAAC - CTGAACATTGCAACAATATAC) on contig 60 (232804 nt) Astart:31252 Aend:31273 Bstart:57530 Bend:57509 CALCULATED DISTANCE APART: 26278 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -338827 <- tig#r.74, A=160344 nt (start:13494, end:13515) B=238371 nt (start:26394, end:26415) CALCULATED DISTANCE APART: -338827 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.71 -> -951072 <- tig#16, B=271268 nt (start:242987, end:242966) A=2098954 nt (start:728085, end:728064) CALCULATED DISTANCE APART: -951072 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#51 -> -1216915 <- tig#r.38, A=875428 nt (start:740018, end:740039) B=1143067 nt (start:41562, end:41583) CALCULATED DISTANCE APART: -1216915 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTAAAACGAAGATAAGATGCA - AATGGATAATCACTATCGTAA) on contig 1 (4853111 nt) Astart:345846 Aend:345867 Bstart:391112 Bend:391091 CALCULATED DISTANCE APART: 45266 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#58 -> -765518 <- tig#r.41, A=374416 nt (start:44359, end:44380) B=667251 nt (start:211790, end:211811) CALCULATED DISTANCE APART: -765518 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.403 -> -2330792 <- tig#13, B=1321 nt (start:545, end:524) A=2650694 nt (start:2350247, end:2350226) CALCULATED DISTANCE APART: -2330792 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#38 -> -1704765 <- tig#7, B=1143067 nt (start:41407, end:41428) A=3534247 nt (start:623105, end:623084) CALCULATED DISTANCE APART: -1704765 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082682, end:2082703) B=976128 nt (start:960840, end:960861) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.5 -> -1844442 <- tig#11, B=3689108 nt (start:1493101, end:1493080) A=4628067 nt (start:371341, end:371320) CALCULATED DISTANCE APART: -1844442 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCGATGCTAGAATACCTTGGG - AAGAGACAAGTTGATCAGCTC) on contig 41 (667251 nt) Astart:88733 Aend:88712 Bstart:76053 Bend:76074 CALCULATED DISTANCE APART: 12680 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.25 -> -1385598 <- tig#38, B=1290536 nt (start:1101330, end:1101309) A=1143067 nt (start:304268, end:304247) CALCULATED DISTANCE APART: -1385598 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGGAGTTGTGCAAATGGTGAA - AACCTTCTCAACTGACGCTTT) on contig 2 (5014909 nt) Astart:1269466 Aend:1269487 Bstart:1284128 Bend:1284107 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282022, end:282043) B=2196 nt (start:203, end:182) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -1335763 <- tig#4, B=3747885 nt (start:2857612, end:2857633) A=3837743 nt (start:465490, end:465469) CALCULATED DISTANCE APART: -1335763 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#74 -> -258389 <- tig#56, A=238371 nt (start:58942, end:58963) B=262460 nt (start:98960, end:98939) CALCULATED DISTANCE APART: -258389 < -2000 Pairs unsatisfied in distance within a contig. Pair (TACATAAATGAATCAATAATG - GGCAGTAATAAGATTCCCACG) on contig 37 (853709 nt) Astart:838434 Aend:838413 Bstart:822929 Bend:822950 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260707, end:2260728) B=356404 nt (start:342517, end:342538) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ACAGAGAGGCAAACGAAGCAG - GCCAACGGTTATGAAATTTTA) on contig 15 (3712591 nt) Astart:1791900 Aend:1791879 Bstart:2055972 Bend:2055993 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6228 <- tig#57, B=27696 nt (start:1534, end:1555) A=258385 nt (start:66, end:45) CALCULATED DISTANCE APART: -6228 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#283 -> -3818458 <- tig#2, A=1768 nt (start:368, end:389) B=5014909 nt (start:3837058, end:3837037) CALCULATED DISTANCE APART: -3818458 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.155 -> -75138 <- tig#46, B=18420 nt (start:15821, end:15800) A=577887 nt (start:79317, end:79296) CALCULATED DISTANCE APART: -75138 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATATTATTTATGTTTTAAAAG - AGAATTTGAGCGAAGCGGTTT) on contig 34 (1705564 nt) Astart:679909 Aend:679888 Bstart:664946 Bend:664967 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.31 -> -71289 <- tig#98, B=976128 nt (start:16815, end:16794) A=88184 nt (start:74474, end:74453) CALCULATED DISTANCE APART: -71289 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATGATTACCTTTTGCTTCTCT - CATGTTAAGTCAGTCTTGAGA) on contig 15 (3712591 nt) Astart:3350375 Aend:3350396 Bstart:3375363 Bend:3375342 CALCULATED DISTANCE APART: 24988 Pairs unsatisfied in pairing logic within a contig. Pair (TACGCTTTAGCTACAATTTTT - TCTTGTTTTAACTTTGATCAA) on contig 15 (3712591 nt) Astart:1717413 Aend:1717434 Bstart:1730605 Bend:1730626 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459549, end:459528) A=1345436 nt (start:26111, end:26090) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082722, end:2082743) B=976128 nt (start:960800, end:960821) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#7 -> -40376 <- tig#74, B=3534247 nt (start:3500289, end:3500310) A=238371 nt (start:26418, end:26397) CALCULATED DISTANCE APART: -40376 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#48 -> -127299 <- tig#r.65, A=487359 nt (start:470655, end:470676) B=286124 nt (start:155529, end:155550) CALCULATED DISTANCE APART: -127299 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.21 -> -3160069 <- tig#34, B=1811326 nt (start:1672757, end:1672736) A=1705564 nt (start:1507312, end:1507291) CALCULATED DISTANCE APART: -3160069 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#79 -> -614150 <- tig#r.2, A=136600 nt (start:76392, end:76413) B=5014909 nt (start:4440967, end:4440988) CALCULATED DISTANCE APART: -614150 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#2 -> -607451 <- tig#56, A=5014909 nt (start:4622858, end:4622879) B=262460 nt (start:235400, end:235379) CALCULATED DISTANCE APART: -607451 < -2000 Pairs unsatisfied in distance within a contig. Pair (CATCATCACCATCCTTTAGAT - TATTTTAATTTGGCAGCTCAC) on contig 37 (853709 nt) Astart:537787 Aend:537808 Bstart:550457 Bend:550436 CALCULATED DISTANCE APART: 12670 Pairs unsatisfied in distance within a contig. Pair (TTTTTGTTTTCTTCTCTAAAC - TAGAGTAAATGAAATGTATAG) on contig 14 (2271162 nt) Astart:1979316 Aend:1979337 Bstart:2003324 Bend:2003303 CALCULATED DISTANCE APART: 24008 Pairs unsatisfied in distance within a contig. Pair (ATGGTATTTGGGAGAAACTTA - AAGGTATACGGTCTAGTGTTT) on contig 5 (3689108 nt) Astart:1169872 Aend:1169893 Bstart:1185007 Bend:1184986 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig. Pair (TCATGGACTTATATTGGTATT - TAGTCAGGCTTTAGCTCATAA) on contig 41 (667251 nt) Astart:88253 Aend:88232 Bstart:75573 Bend:75594 CALCULATED DISTANCE APART: 12680 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728118, end:728139) A=1096 nt (start:203, end:182) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#9 -> -2729016 <- tig#69, A=3747885 nt (start:1134453, end:1134474) B=186132 nt (start:135584, end:135563) CALCULATED DISTANCE APART: -2729016 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AATCTTCAAAGGAGTCATTCG - CGCATCTCATACATGTACGAT) on contig 19 (3531543 nt) Astart:3060066 Aend:3060045 Bstart:3048657 Bend:3048636 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#265 -> -3126344 <- tig#4, A=1946 nt (start:1631, end:1652) B=3837743 nt (start:3146029, end:3146008) CALCULATED DISTANCE APART: -3126344 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185739, end:4185718) A=3712591 nt (start:822, end:801) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.1 -> -4590186 <- tig#16, B=4853111 nt (start:3207892, end:3207871) A=2098954 nt (start:1402294, end:1402273) CALCULATED DISTANCE APART: -4590186 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTTGGGAATGGGAGGTGGCGG - TCCACAAGAAGGTATGATTCT) on contig 5 (3689108 nt) Astart:1169717 Aend:1169738 Bstart:1184852 Bend:1184831 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.42 -> -1433157 <- tig#20, B=659641 nt (start:2318, end:2297) A=2328057 nt (start:1450839, end:1450818) CALCULATED DISTANCE APART: -1433157 < -2000 Pairs unsatisfied in distance within a contig. Pair (AACGGAAGCAATACCCATCTG - TCAAGTATCAATTGGTGGAGT) on contig 14 (2271162 nt) Astart:2001153 Aend:2001132 Bstart:1734386 Bend:1734407 CALCULATED DISTANCE APART: 266767 Pairs unsatisfied in pairing logic within a contig. Pair (TATCCGCCCGTCATGTCGTTA - TTGAACAAACAAATAAAAAAA) on contig 14 (2271162 nt) Astart:658411 Aend:658390 Bstart:495500 Bend:495479 Pairs unsatisfied in distance within a contig. Pair (TCCGACGTTGAGGCGATCCGA - ACCATACTTCAGATCTCATAT) on contig 5 (3689108 nt) Astart:1171797 Aend:1171818 Bstart:1186933 Bend:1186912 CALCULATED DISTANCE APART: 15136 Pairs unsatisfied in distance within a contig. Pair (GAATCTGGAATGATATGATTG - TTGCTTCAGTACGTCCTCAAC) on contig 1 (4853111 nt) Astart:347050 Aend:347071 Bstart:392327 Bend:392306 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -946177 <- tig#r.35, A=2650694 nt (start:2507768, end:2507789) B=1135475 nt (start:312224, end:312245) CALCULATED DISTANCE APART: -946177 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTATCGAACGCCATCTCGTTA - ATAATAATTTTTAGATTGTTT) on contig 5 (3689108 nt) Astart:1171867 Aend:1171888 Bstart:1187003 Bend:1186982 CALCULATED DISTANCE APART: 15136 Pairs unsatisfied in pairing logic within a contig. Pair (ACAGTATCAGAATTAAAACCC - AGACGTACGACATCAGCCTGG) on contig 15 (3712591 nt) Astart:1718053 Aend:1718074 Bstart:1729965 Bend:1729986 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -214292 <- tig#6, A=354284 nt (start:134435, end:134456) B=6870868 nt (start:14443, end:14422) CALCULATED DISTANCE APART: -214292 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.155 -> -75138 <- tig#46, B=18420 nt (start:15871, end:15850) A=577887 nt (start:79267, end:79246) CALCULATED DISTANCE APART: -75138 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#31 -> -496427 <- tig#41, B=976128 nt (start:946400, end:946421) A=667251 nt (start:486699, end:486678) CALCULATED DISTANCE APART: -496427 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CAAATAAGTTAGGATGATTTG - CTTATTAAAAGTTTTAACTTT) on contig 15 (3712591 nt) Astart:1717793 Aend:1717814 Bstart:1730225 Bend:1730246 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#33 -> -492044 <- tig#32, A=1290487 nt (start:1235757, end:1235778) B=972151 nt (start:457314, end:457293) CALCULATED DISTANCE APART: -492044 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTGTTGTCTGCTTACCTATTA - AACTCTGCAAACATTTCATAT) on contig 2 (5014909 nt) Astart:1268881 Aend:1268902 Bstart:1283543 Bend:1283522 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#74 -> -453293 <- tig#r.47, A=238371 nt (start:73383, end:73404) B=471458 nt (start:163153, end:163174) CALCULATED DISTANCE APART: -453293 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#119 -> -7707 <- tig#r.49, A=46878 nt (start:31760, end:31781) B=399963 nt (start:387374, end:387395) CALCULATED DISTANCE APART: -7707 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728133, end:728154) A=1096 nt (start:218, end:197) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -214292 <- tig#6, A=354284 nt (start:134105, end:134126) B=6870868 nt (start:14113, end:14092) CALCULATED DISTANCE APART: -214292 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#19 -> -3044633 <- tig#r.72, A=3531543 nt (start:471431, end:471452) B=172011 nt (start:167490, end:167511) CALCULATED DISTANCE APART: -3044633 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATGCACACACAAGGAACAGAG - CTTTGACCGTATCATTCAAAC) on contig 6 (6870868 nt) Astart:1138129 Aend:1138108 Bstart:1129702 Bend:1129723 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -40662 <- tig#443, A=736718 nt (start:676736, end:676757) B=1213 nt (start:680, end:659) CALCULATED DISTANCE APART: -40662 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGTTAACAGAAGAGATATCAT - AAATAAATCTTGGACTTGAAC) on contig 26 (1332708 nt) Astart:324727 Aend:324748 Bstart:396837 Bend:396816 CALCULATED DISTANCE APART: 72110 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#19 -> -3098757 <- tig#47, A=3531543 nt (start:470006, end:470027) B=471458 nt (start:57220, end:57199) CALCULATED DISTANCE APART: -3098757 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTCATTTGTAACAAATATCGT - CGTTGCTCCCTTTGTCTGTCC) on contig 2 (5014909 nt) Astart:1269796 Aend:1269817 Bstart:1284458 Bend:1284437 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459884, end:459863) A=1345436 nt (start:25776, end:25755) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136688, end:136709) B=15068 nt (start:988, end:1009) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459679, end:459658) A=1345436 nt (start:25981, end:25960) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460969, end:460948) A=1345436 nt (start:24691, end:24670) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TCCATAATCTTCAAAGGAGTC - CTCATACATGTACGATCTAAC) on contig 19 (3531543 nt) Astart:3060071 Aend:3060050 Bstart:3048652 Bend:3048631 Pairs unsatisfied in distance within a contig. Pair (GCAGAATTTGGAAAATAGTCT - CCCAATCACCTCAGAGATCCT) on contig 2 (5014909 nt) Astart:1269716 Aend:1269737 Bstart:1284378 Bend:1284357 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728393, end:728414) A=1096 nt (start:478, end:457) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17055, end:17034) A=1227811 nt (start:6760, end:6739) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#75 -> -1731933 <- tig#19, A=373953 nt (start:275490, end:275511) B=3531543 nt (start:1653470, end:1653449) CALCULATED DISTANCE APART: -1731933 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#10 -> -2964290 <- tig#103, B=3047199 nt (start:261796, end:261817) A=211876 nt (start:198887, end:198866) CALCULATED DISTANCE APART: -2964290 < -2000 Pairs unsatisfied in distance within a contig. Pair (CCAAGGCAACAACAAGACTCA - GTCTAAAAATTTCACAGGACA) on contig 6 (6870868 nt) Astart:1137799 Aend:1137778 Bstart:1129372 Bend:1129393 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730192, end:730213) B=3531543 nt (start:3199766, end:3199745) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.91 -> -51116 <- tig#31, B=101959 nt (start:16530, end:16509) A=976128 nt (start:54586, end:54565) CALCULATED DISTANCE APART: -51116 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTTTGAAGTCATGGAAATGGG - TATGCGAGTCTTCCAAATTTA) on contig 5 (3689108 nt) Astart:1169642 Aend:1169663 Bstart:1184777 Bend:1184756 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#41 -> -2934207 <- tig#12, A=667251 nt (start:387947, end:387968) B=2766197 nt (start:2674903, end:2674882) CALCULATED DISTANCE APART: -2934207 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.38 -> -1309655 <- tig#33, B=1143067 nt (start:1037339, end:1037318) A=1290487 nt (start:292316, end:292295) CALCULATED DISTANCE APART: -1309655 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATCGGGATGCTGATCTCTTCA - TAAAAGTTGAAGACTAATCTT) on contig 15 (3712591 nt) Astart:3352272 Aend:3352293 Bstart:3377258 Bend:3377237 CALCULATED DISTANCE APART: 24986 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260502, end:2260523) B=356404 nt (start:342722, end:342743) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#53 -> -24524 <- tig#2, B=354284 nt (start:340734, end:340755) A=5014909 nt (start:30974, end:30953) CALCULATED DISTANCE APART: -24524 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGGATTTGTCGACCAGGAGTT - TCGACAAATCCTCGACCACTC) on contig 95 (92653 nt) Astart:92575 Aend:92554 Bstart:92563 Bend:92584 CALCULATED DISTANCE APART: 12 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#25 -> -666259 <- tig#2, B=1290536 nt (start:852807, end:852828) A=5014909 nt (start:248530, end:248509) CALCULATED DISTANCE APART: -666259 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#131 -> -56395 <- tig#91, B=36503 nt (start:14267, end:14288) A=101959 nt (start:54159, end:54138) CALCULATED DISTANCE APART: -56395 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459944, end:459923) A=1345436 nt (start:25716, end:25695) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.97 -> -761836 <- tig#16, B=91050 nt (start:53931, end:53910) A=2098954 nt (start:727905, end:727884) CALCULATED DISTANCE APART: -761836 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#56 -> -532325 <- tig#5, A=262460 nt (start:70365, end:70386) B=3689108 nt (start:360230, end:360209) CALCULATED DISTANCE APART: -532325 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#283 -> -3818458 <- tig#2, A=1768 nt (start:608, end:629) B=5014909 nt (start:3837298, end:3837277) CALCULATED DISTANCE APART: -3818458 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAAATGGATTGATGCTGAAGA - GCTTACCAGGTATGACCTTCT) on contig 6 (6870868 nt) Astart:4411844 Aend:4411865 Bstart:4445798 Bend:4445777 CALCULATED DISTANCE APART: 33954 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.521 -> -111708 <- tig#63, B=1100 nt (start:517, end:496) A=274372 nt (start:131191, end:131170) CALCULATED DISTANCE APART: -111708 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.1 -> -4590186 <- tig#16, B=4853111 nt (start:3207757, end:3207736) A=2098954 nt (start:1402429, end:1402408) CALCULATED DISTANCE APART: -4590186 < -2000 Pairs unsatisfied in distance within a contig. Pair (ACTCAAATTCACTTCCAAAGC - ACAAGTAAGAAGCTGTAAAAA) on contig 6 (6870868 nt) Astart:1138439 Aend:1138418 Bstart:1130012 Bend:1130033 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in pairing logic within a contig. Pair (TCCTTCGAATCGTCTCTCTCT - TTTCTTAGAGATTTGTACAAA) on contig 15 (3712591 nt) Astart:1792167 Aend:1792146 Bstart:2056222 Bend:2056243 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16220, end:16199) A=1227811 nt (start:7595, end:7574) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135483, end:135504) B=15068 nt (start:2193, end:2214) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CTTGGATTTATCGATAGATTT - AGAAATCATTTGTATTTTATC) on contig 15 (3712591 nt) Astart:1717658 Aend:1717679 Bstart:1730360 Bend:1730381 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.15 -> -3863647 <- tig#1, B=3712591 nt (start:1966227, end:1966206) A=4853111 nt (start:1917420, end:1917399) CALCULATED DISTANCE APART: -3863647 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460004, end:459983) A=1345436 nt (start:25656, end:25635) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219231, end:4219210) A=2598 nt (start:2390, end:2369) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728148, end:728169) A=1096 nt (start:233, end:212) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135243, end:135264) B=15068 nt (start:2433, end:2454) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136128, end:136149) B=15068 nt (start:1548, end:1569) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#64 -> -210549 <- tig#109, B=211265 nt (start:917, end:938) A=66564 nt (start:20201, end:20180) CALCULATED DISTANCE APART: -210549 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#34 -> -45323 <- tig#129, A=1705564 nt (start:1679280, end:1679301) B=39603 nt (start:39039, end:39018) CALCULATED DISTANCE APART: -45323 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#34 -> -15928 <- tig#r.132, A=1705564 nt (start:1679280, end:1679301) B=34686 nt (start:25042, end:25063) CALCULATED DISTANCE APART: -15928 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#34 -> -9389 <- tig#129, A=1705564 nt (start:1679280, end:1679301) B=39603 nt (start:3105, end:3084) CALCULATED DISTANCE APART: -9389 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TCGGCTACAGCGGAGAAGAAG - AACAACCACTCAAAGGTAACA) on contig 15 (3712591 nt) Astart:1718708 Aend:1718729 Bstart:1729310 Bend:1729331 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.28 -> -4041595 <- tig#8, B=1171658 nt (start:690016, end:689995) A=5070776 nt (start:3371579, end:3371558) CALCULATED DISTANCE APART: -4041595 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.22 -> -1981741 <- tig#9, B=1636463 nt (start:919102, end:919081) A=3747885 nt (start:1082639, end:1082618) CALCULATED DISTANCE APART: -1981741 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219146, end:4219125) A=2598 nt (start:2475, end:2454) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -40662 <- tig#443, A=736718 nt (start:676581, end:676602) B=1213 nt (start:525, end:504) CALCULATED DISTANCE APART: -40662 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATTCGACAGTATCAGAATTAA - TACGACATCAGCCTGGACGAG) on contig 15 (3712591 nt) Astart:1718048 Aend:1718069 Bstart:1729970 Bend:1729991 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#81 -> -2917593 <- tig#r.7, A=258617 nt (start:239575, end:239596) B=3534247 nt (start:615696, end:615717) CALCULATED DISTANCE APART: -2917593 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.46 -> -213331 <- tig#51, B=577887 nt (start:159948, end:159927) A=875428 nt (start:73383, end:73362) CALCULATED DISTANCE APART: -213331 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17500, end:17479) A=1227811 nt (start:6315, end:6294) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -3661461 <- tig#r.3, A=262460 nt (start:68600, end:68621) B=3889482 nt (start:401881, end:401902) CALCULATED DISTANCE APART: -3661461 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#26 -> -90650 <- tig#95, B=1332708 nt (start:1310678, end:1310699) A=92653 nt (start:88620, end:88599) CALCULATED DISTANCE APART: -90650 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TAATTATTATAATAAGTAAGG - AACCTCCTTTATTGCTCCCAA) on contig 19 (3531543 nt) Astart:3059896 Aend:3059875 Bstart:3048827 Bend:3048806 Pairs unsatisfied in distance within a contig. Pair (TGTCCAGAAAACCTAAATATA - GCTTTTGGAGAAAATCGGATC) on contig 34 (1705564 nt) Astart:679739 Aend:679718 Bstart:664776 Bend:664797 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33669, end:33648) A=855454 nt (start:18780, end:18759) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TGATTTGACTTGTGAATGATG - TTTAAGACATTGTTATCAGCA) on contig 15 (3712591 nt) Astart:1717568 Aend:1717589 Bstart:1730450 Bend:1730471 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459149, end:459128) A=1345436 nt (start:26511, end:26490) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCGTTTTAATGTGTTTTACAT - TGATGAGGGTGGAAGGGAGGC) on contig 25 (1290536 nt) Astart:990154 Aend:990133 Bstart:975620 Bend:975641 CALCULATED DISTANCE APART: 14534 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185794, end:4185773) A=3712591 nt (start:767, end:746) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGAATAATACTAAGATTGTGA - TATACTATATTTAAGAAGCAT) on contig 37 (853709 nt) Astart:838629 Aend:838608 Bstart:823124 Bend:823145 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in pairing logic within a contig. Pair (CGAGTTTGTCCTAATTCAGAC - AAATTTCATTTCTGCTAGCAG) on contig 19 (3531543 nt) Astart:3058078 Aend:3058057 Bstart:3050642 Bend:3050621 Pairs unsatisfied in pairing logic within a contig. Pair (ATGAGTAAGTAAATGTTCTTC - TCCTGATTCATTGATATATGT) on contig 15 (3712591 nt) Astart:1717183 Aend:1717204 Bstart:1730835 Bend:1730856 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#33 -> -492044 <- tig#32, A=1290487 nt (start:1235682, end:1235703) B=972151 nt (start:457239, end:457218) CALCULATED DISTANCE APART: -492044 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282417, end:282438) B=2196 nt (start:598, end:577) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#34 -> -3900848 <- tig#r.11, A=1705564 nt (start:54542, end:54563) B=4628067 nt (start:2358241, end:2358262) CALCULATED DISTANCE APART: -3900848 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATTATATAAACTCATTTGTAA - TTTGTCTGTCCTGAAGAGACA) on contig 2 (5014909 nt) Astart:1269786 Aend:1269807 Bstart:1284448 Bend:1284427 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig. Pair (AGAGATTCAAAAGTATACTTA - ATCAAAATATGTTGATTTTTA) on contig 25 (1290536 nt) Astart:1183957 Aend:1183978 Bstart:1199244 Bend:1199223 CALCULATED DISTANCE APART: 15287 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3583 <- tig#26, B=1171658 nt (start:1171403, end:1171424) A=1332708 nt (start:23328, end:23307) CALCULATED DISTANCE APART: -3583 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -2669058 <- tig#8, B=3747885 nt (start:1992970, end:1992949) A=5070776 nt (start:696088, end:696067) CALCULATED DISTANCE APART: -2669058 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTTGGGGAAAAAACAAAAACC - TATTTCACAAAATCTTGGATA) on contig 6 (6870868 nt) Astart:1138024 Aend:1138003 Bstart:1129597 Bend:1129618 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#30 -> -340634 <- tig#93, A=1050452 nt (start:834147, end:834168) B=152036 nt (start:144329, end:144308) CALCULATED DISTANCE APART: -340634 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.6 -> -3479340 <- tig#2, B=6870868 nt (start:2792489, end:2792468) A=5014909 nt (start:706851, end:706830) CALCULATED DISTANCE APART: -3479340 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.140 -> -14013 <- tig#136, B=26310 nt (start:11500, end:11479) A=49085 nt (start:22513, end:22492) CALCULATED DISTANCE APART: -14013 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460414, end:460393) A=1345436 nt (start:25246, end:25225) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#34 -> -1107781 <- tig#79, A=1705564 nt (start:662221, end:662242) B=136600 nt (start:84438, end:84417) CALCULATED DISTANCE APART: -1107781 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTCCCCCAAGGGAGCGATCGA - GAAAGCTCAGTACAGACCTTA) on contig 15 (3712591 nt) Astart:3352507 Aend:3352528 Bstart:3377493 Bend:3377472 CALCULATED DISTANCE APART: 24986 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#10 -> -3973158 <- tig#25, A=3047199 nt (start:155386, end:155407) B=1290536 nt (start:1101345, end:1101324) CALCULATED DISTANCE APART: -3973158 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#49 -> -5102650 <- tig#6, B=399963 nt (start:43527, end:43548) A=6870868 nt (start:4766214, end:4766193) CALCULATED DISTANCE APART: -5102650 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.12 -> -3187161 <- tig#42, B=2766197 nt (start:2668230, end:2668209) A=659641 nt (start:538931, end:538910) CALCULATED DISTANCE APART: -3187161 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGGATGATTTGGCCGTATGTT - TTATAAATATCTTATTAAAAG) on contig 15 (3712591 nt) Astart:1717803 Aend:1717824 Bstart:1730215 Bend:1730236 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:281942, end:281963) B=2196 nt (start:123, end:102) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260812, end:2260833) B=356404 nt (start:342412, end:342433) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.101 -> -46827 <- tig#107, B=84691 nt (start:23949, end:23928) A=68734 nt (start:42878, end:42857) CALCULATED DISTANCE APART: -46827 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#58 -> -329129 <- tig#94, A=374416 nt (start:44244, end:44265) B=93323 nt (start:18957, end:18936) CALCULATED DISTANCE APART: -329129 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#185 -> -12926 <- tig#r.53, A=9655 nt (start:5231, end:5252) B=354284 nt (start:325782, end:325803) CALCULATED DISTANCE APART: -12926 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTCTGGATAATGATAGGAAAG - GTTAGTGGGTTTGGGCCTTGA) on contig 30 (1050452 nt) Astart:648499 Aend:648520 Bstart:673533 Bend:673512 CALCULATED DISTANCE APART: 25034 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.155 -> -75138 <- tig#46, B=18420 nt (start:15836, end:15815) A=577887 nt (start:79302, end:79281) CALCULATED DISTANCE APART: -75138 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.38 -> -1310006 <- tig#33, B=1143067 nt (start:1039194, end:1039173) A=1290487 nt (start:290812, end:290791) CALCULATED DISTANCE APART: -1310006 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#19 -> -9908551 <- tig#6, A=3531543 nt (start:469346, end:469367) B=6870868 nt (start:6866354, end:6866333) CALCULATED DISTANCE APART: -9908551 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730962, end:730983) B=3531543 nt (start:3200536, end:3200515) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -621133 <- tig#r.66, A=2766197 nt (start:2129418, end:2129439) B=201913 nt (start:197559, end:197580) CALCULATED DISTANCE APART: -621133 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -1335763 <- tig#4, B=3747885 nt (start:2857167, end:2857188) A=3837743 nt (start:465045, end:465024) CALCULATED DISTANCE APART: -1335763 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATTTTTTTGGGGAAAAAACAA - CACAAAATCTTGGATACAATG) on contig 6 (6870868 nt) Astart:1138029 Aend:1138008 Bstart:1129602 Bend:1129623 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig. Pair (AGAAGAGGAAGTACGATTTTC - TCCCATTGGTTCCTATTAATT) on contig 1 (4853111 nt) Astart:346235 Aend:346256 Bstart:391512 Bend:391491 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig. Pair (ATGATTAAACTTACTTTATTG - GACAACCTGATGCGAGGATGC) on contig 131 (36503 nt) Astart:30907 Aend:30886 Bstart:14537 Bend:14558 CALCULATED DISTANCE APART: 16370 Pairs unsatisfied in pairing logic within a contig. Pair (CTTACCTCAAATTAATTAATT - ATGGATTCGGTATAACTTTTT) on contig 15 (3712591 nt) Astart:1717393 Aend:1717414 Bstart:1730625 Bend:1730646 Pairs unsatisfied in distance within a contig. Pair (ACTGTAGCGAAAATTACTGAA - CAATATCTGAAGCAACTTTGT) on contig 2 (5014909 nt) Astart:1269681 Aend:1269702 Bstart:1284343 Bend:1284322 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#56 -> -176313 <- tig#92, B=262460 nt (start:68586, end:68607) A=101136 nt (start:2439, end:2418) CALCULATED DISTANCE APART: -176313 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12881, end:12860) A=91302 nt (start:11312, end:11291) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#136 -> -28557 <- tig#277, B=49085 nt (start:909, end:930) A=1801 nt (start:381, end:360) CALCULATED DISTANCE APART: -28557 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4186039, end:4186018) A=3712591 nt (start:522, end:501) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GGTTAATATGCAGGAGTTGAT - TGATTACTAGATTATAGTATT) on contig 14 (2271162 nt) Astart:658331 Aend:658310 Bstart:495580 Bend:495559 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#51 -> -623213 <- tig#r.54, A=875428 nt (start:750780, end:750801) B=625914 nt (start:107349, end:107370) CALCULATED DISTANCE APART: -623213 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -322558 <- tig#r.572, A=2650694 nt (start:2308800, end:2308821) B=1031 nt (start:367, end:388) CALCULATED DISTANCE APART: -322558 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#27 -> -2275219 <- tig#14, A=1227811 nt (start:935716, end:935737) B=2271162 nt (start:2003124, end:2003103) CALCULATED DISTANCE APART: -2275219 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAACTGTTTACGCATCTGGAG - ATAACTGCCGATTTGCTACAG) on contig 19 (3531543 nt) Astart:1348119 Aend:1348098 Bstart:1310974 Bend:1310995 CALCULATED DISTANCE APART: 37145 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#56 -> -532300 <- tig#5, B=262460 nt (start:70365, end:70386) A=3689108 nt (start:360205, end:360184) CALCULATED DISTANCE APART: -532300 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#86 -> -735496 <- tig#17, B=280231 nt (start:15124, end:15145) A=1959065 nt (start:490389, end:490368) CALCULATED DISTANCE APART: -735496 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.74 -> -1813138 <- tig#17, B=238371 nt (start:59088, end:59067) A=1959065 nt (start:1774050, end:1774029) CALCULATED DISTANCE APART: -1813138 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#265 -> -3126344 <- tig#4, A=1946 nt (start:1776, end:1797) B=3837743 nt (start:3146174, end:3146153) CALCULATED DISTANCE APART: -3126344 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082402, end:2082423) B=976128 nt (start:961120, end:961141) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2595, end:2616) A=258385 nt (start:1131, end:1110) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -40662 <- tig#443, A=736718 nt (start:676416, end:676437) B=1213 nt (start:360, end:339) CALCULATED DISTANCE APART: -40662 < -2000 Pairs unsatisfied in distance within a contig. Pair (CCGGTGCTCTCTTCTCTCGTA - ACAACAAACAAAGCATAGATT) on contig 1 (4853111 nt) Astart:346255 Aend:346276 Bstart:391532 Bend:391511 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.29 -> -1051406 <- tig#12, B=1463708 nt (start:953454, end:953433) A=2766197 nt (start:117952, end:117931) CALCULATED DISTANCE APART: -1051406 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.403 -> -2330792 <- tig#13, B=1321 nt (start:955, end:934) A=2650694 nt (start:2349837, end:2349816) CALCULATED DISTANCE APART: -2330792 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460654, end:460633) A=1345436 nt (start:25006, end:24985) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#102 -> -27175 <- tig#122, A=83426 nt (start:52828, end:52849) B=43035 nt (start:16577, end:16556) CALCULATED DISTANCE APART: -27175 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730807, end:730828) B=3531543 nt (start:3200381, end:3200360) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATGAACAGCAGAAGAAGAAGG - TGGTCATTTGGATCTTAGCCA) on contig 7 (3534247 nt) Astart:2256667 Aend:2256646 Bstart:2238111 Bend:2238090 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:458799, end:458778) A=1345436 nt (start:26861, end:26840) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ACTCAGGGCGGGTTAATATGC - ATTATAGTATTAATTAAATAT) on contig 14 (2271162 nt) Astart:658341 Aend:658320 Bstart:495570 Bend:495549 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.46 -> -542068 <- tig#48, B=577887 nt (start:156220, end:156199) A=487359 nt (start:405848, end:405827) CALCULATED DISTANCE APART: -542068 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#12 -> -1284160 <- tig#25, A=2766197 nt (start:2563097, end:2563118) B=1290536 nt (start:1101060, end:1101039) CALCULATED DISTANCE APART: -1284160 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -214292 <- tig#6, A=354284 nt (start:133330, end:133351) B=6870868 nt (start:13338, end:13317) CALCULATED DISTANCE APART: -214292 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTGAAGCATGTGAAGCAAAAA - TGGACTGCATATTCGTCCATC) on contig 2 (5014909 nt) Astart:1270111 Aend:1270132 Bstart:1284773 Bend:1284752 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in pairing logic within a contig. Pair (AAGAAGTCAACGGTGGAGGAT - AACAAAAGTATGATAAACAAC) on contig 15 (3712591 nt) Astart:1718723 Aend:1718744 Bstart:1729295 Bend:1729316 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.54 -> -427249 <- tig#63, B=625914 nt (start:413287, end:413266) A=274372 nt (start:33962, end:33941) CALCULATED DISTANCE APART: -427249 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#60 -> -164722 <- tig#92, B=232804 nt (start:136408, end:136429) A=101136 nt (start:88326, end:88305) CALCULATED DISTANCE APART: -164722 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -214292 <- tig#6, A=354284 nt (start:134350, end:134371) B=6870868 nt (start:14358, end:14337) CALCULATED DISTANCE APART: -214292 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219461, end:4219440) A=2598 nt (start:2160, end:2139) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#84 -> -1659588 <- tig#34, A=197079 nt (start:196799, end:196820) B=1705564 nt (start:1679308, end:1679287) CALCULATED DISTANCE APART: -1659588 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#84 -> -15597 <- tig#135, A=197079 nt (start:196799, end:196820) B=39094 nt (start:35317, end:35296) CALCULATED DISTANCE APART: -15597 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#84 -> -32829 <- tig#r.112, A=197079 nt (start:196799, end:196820) B=54810 nt (start:2261, end:2282) CALCULATED DISTANCE APART: -32829 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185774, end:4185753) A=3712591 nt (start:787, end:766) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -621133 <- tig#r.66, A=2766197 nt (start:2129288, end:2129309) B=201913 nt (start:197689, end:197710) CALCULATED DISTANCE APART: -621133 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AAACAAATACATATAATCATA - AAATATACAGATTTCACAGAA) on contig 19 (3531543 nt) Astart:3060261 Aend:3060240 Bstart:3048462 Bend:3048441 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.6 -> -5416206 <- tig#35, B=6870868 nt (start:4672195, end:4672174) A=1135475 nt (start:764011, end:763990) CALCULATED DISTANCE APART: -5416206 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260432, end:2260453) B=356404 nt (start:342792, end:342813) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATTGTTTCATGTCTATGTTTG - CTATAATATATATTCTCTTAT) on contig 19 (3531543 nt) Astart:3060341 Aend:3060320 Bstart:3048382 Bend:3048361 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#14 -> -765455 <- tig#43, B=2271162 nt (start:2082989, end:2083010) A=1235946 nt (start:597282, end:597261) CALCULATED DISTANCE APART: -765455 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.16 -> -2023999 <- tig#291, B=2098954 nt (start:2043654, end:2043633) A=1714 nt (start:345, end:324) CALCULATED DISTANCE APART: -2023999 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.16 -> -2023988 <- tig#291, B=2098954 nt (start:2043643, end:2043622) A=1714 nt (start:345, end:324) CALCULATED DISTANCE APART: -2023988 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.42 -> -1114581 <- tig#32, B=659641 nt (start:590048, end:590027) A=972151 nt (start:544533, end:544512) CALCULATED DISTANCE APART: -1114581 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -1335762 <- tig#4, B=3747885 nt (start:2857372, end:2857393) A=3837743 nt (start:465249, end:465228) CALCULATED DISTANCE APART: -1335762 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#22 -> -6369411 <- tig#6, B=1636463 nt (start:14321, end:14342) A=6870868 nt (start:4767269, end:4767248) CALCULATED DISTANCE APART: -6369411 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#48 -> -585449 <- tig#46, A=487359 nt (start:41978, end:41999) B=577887 nt (start:160068, end:160047) CALCULATED DISTANCE APART: -585449 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#4 -> -3722598 <- tig#r.11, A=3837743 nt (start:3544042, end:3544063) B=4628067 nt (start:1179170, end:1179191) CALCULATED DISTANCE APART: -3722598 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.25 -> -1385598 <- tig#38, B=1290536 nt (start:1101160, end:1101139) A=1143067 nt (start:304438, end:304417) CALCULATED DISTANCE APART: -1385598 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#174 -> -90145 <- tig#93, B=11297 nt (start:4896, end:4917) A=152036 nt (start:103744, end:103723) CALCULATED DISTANCE APART: -90145 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3582 <- tig#26, B=1171658 nt (start:1170969, end:1170990) A=1332708 nt (start:22893, end:22872) CALCULATED DISTANCE APART: -3582 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#40 -> -506904 <- tig#r.79, A=668174 nt (start:201477, end:201498) B=136600 nt (start:76393, end:76414) CALCULATED DISTANCE APART: -506904 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATGTCTGAAATCAATAAGATG - AGACACCACTTGAATGTTATC) on contig 2 (5014909 nt) Astart:1269911 Aend:1269932 Bstart:1284573 Bend:1284552 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig. Pair (AAATATTAGTTAAGTATTAAA - CAAATACAGAAACTTTGATCT) on contig 34 (1705564 nt) Astart:679499 Aend:679478 Bstart:664536 Bend:664557 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460184, end:460163) A=1345436 nt (start:25476, end:25455) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#52 -> -356009 <- tig#3, B=356404 nt (start:132, end:153) A=3889482 nt (start:19737, end:19716) CALCULATED DISTANCE APART: -356009 < -2000 Pairs unsatisfied in distance within a contig. Pair (GTTTGCATCGAAGGTAACAGA - GAAGCACTTTTTCTTCTTAAT) on contig 37 (853709 nt) Astart:538657 Aend:538678 Bstart:551327 Bend:551306 CALCULATED DISTANCE APART: 12670 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3583 <- tig#26, B=1171658 nt (start:1171113, end:1171134) A=1332708 nt (start:23038, end:23017) CALCULATED DISTANCE APART: -3583 < -2000 Pairs unsatisfied in distance within a contig. Pair (GTTTCGGACAATAGAGAGAGA - ATAGTTTCGGATAGAGATACT) on contig 30 (1050452 nt) Astart:649629 Aend:649650 Bstart:665395 Bend:665374 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730927, end:730948) B=3531543 nt (start:3200501, end:3200480) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2180, end:2201) A=258385 nt (start:716, end:695) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TAGATCTTATCATCGCAGGCA - ATAAAATTGTTTGAAACGTTT) on contig 15 (3712591 nt) Astart:1792121 Aend:1792100 Bstart:2056182 Bend:2056203 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#148 -> -1869235 <- tig#15, A=35830 nt (start:33999, end:34020) B=3712591 nt (start:1887404, end:1887383) CALCULATED DISTANCE APART: -1869235 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17100, end:17079) A=1227811 nt (start:6715, end:6694) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CCGAAGAAAGCAGTACCTCCG - TCACAGCTTGCACTTCTTCTT) on contig 15 (3712591 nt) Astart:1716703 Aend:1716724 Bstart:1731315 Bend:1731336 Pairs unsatisfied in distance within a contig. Pair (GATGTTGAGAATCCTGGATTG - CCTTACTATTAGAACAACTAA) on contig 37 (853709 nt) Astart:538252 Aend:538273 Bstart:550920 Bend:550899 CALCULATED DISTANCE APART: 12668 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#74 -> -338857 <- tig#r.77, A=238371 nt (start:26396, end:26417) B=160344 nt (start:13462, end:13483) CALCULATED DISTANCE APART: -338857 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#81 -> -2917495 <- tig#r.7, A=258617 nt (start:240649, end:240670) B=3534247 nt (start:614720, end:614741) CALCULATED DISTANCE APART: -2917495 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -129974 <- tig#92, B=4628067 nt (start:147174, end:147153) A=101136 nt (start:2800, end:2779) CALCULATED DISTANCE APART: -129974 < -2000 Pairs unsatisfied in distance within a contig. Pair (GCTGCGAAAGAGAGGAAGAAA - TTTTCTTCGGATCGACATTTT) on contig 1 (4853111 nt) Astart:346815 Aend:346836 Bstart:392092 Bend:392071 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#433 -> -944078 <- tig#r.29, A=1238 nt (start:241, end:262) B=1463708 nt (start:500627, end:500648) CALCULATED DISTANCE APART: -944078 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185659, end:4185638) A=3712591 nt (start:902, end:881) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCCTGATTTGTTGGATGCTTT - CCAAAGCTTCTGAACTCCAAA) on contig 2 (5014909 nt) Astart:1269386 Aend:1269407 Bstart:1284048 Bend:1284027 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#22 -> -6369340 <- tig#6, B=1636463 nt (start:14802, end:14823) A=6870868 nt (start:4767679, end:4767658) CALCULATED DISTANCE APART: -6369340 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTCACTTTCACTACGTTTCAT - ATGCCATGATCTTGAAAGTAA) on contig 10 (3047199 nt) Astart:790109 Aend:790088 Bstart:776196 Bend:776217 CALCULATED DISTANCE APART: 13913 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#95 -> -24071 <- tig#49, A=92653 nt (start:92469, end:92490) B=399963 nt (start:43887, end:43866) CALCULATED DISTANCE APART: -24071 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TAGATTGCGTTTGATATTATA - AATTGCATATAAGGCAGCAAG) on contig 19 (3531543 nt) Astart:3058248 Aend:3058227 Bstart:3050472 Bend:3050451 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.101 -> -46827 <- tig#107, B=84691 nt (start:23984, end:23963) A=68734 nt (start:42843, end:42822) CALCULATED DISTANCE APART: -46827 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -414175 <- tig#43, B=1135475 nt (start:825381, end:825402) A=1235946 nt (start:124081, end:124060) CALCULATED DISTANCE APART: -414175 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#147 -> -2122509 <- tig#6, A=21323 nt (start:6693, end:6714) B=6870868 nt (start:2127879, end:2127858) CALCULATED DISTANCE APART: -2122509 < -2000 Pairs unsatisfied in distance within a contig. Pair (TAATGATGAAGAAACTGGGGT - CTAGTCAAGTACACAAACATG) on contig 1 (4853111 nt) Astart:346430 Aend:346451 Bstart:391707 Bend:391686 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#33 -> -492044 <- tig#32, A=1290487 nt (start:1235867, end:1235888) B=972151 nt (start:457424, end:457403) CALCULATED DISTANCE APART: -492044 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAGGCTTTAATATCTTGTTTA - CACTTGAAATGGGAATCATCC) on contig 5 (3689108 nt) Astart:1169977 Aend:1169998 Bstart:1185112 Bend:1185091 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig. Pair (TTTACATATTTTAATAAGCAT - GAGGTTCTTGCAAACAAGTTC) on contig 109 (66564 nt) Astart:5894 Aend:5873 Bstart:258 Bend:279 CALCULATED DISTANCE APART: 5636 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#87 -> -225074 <- tig#62, B=109083 nt (start:67406, end:67427) A=354710 nt (start:203397, end:203376) CALCULATED DISTANCE APART: -225074 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#94 -> -6189 <- tig#114, B=93323 nt (start:80878, end:80899) A=54818 nt (start:13744, end:13723) CALCULATED DISTANCE APART: -6189 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16905, end:16884) A=1227811 nt (start:6910, end:6889) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17180, end:17159) A=1227811 nt (start:6635, end:6614) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219406, end:4219385) A=2598 nt (start:2215, end:2194) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -40662 <- tig#443, A=736718 nt (start:676721, end:676742) B=1213 nt (start:665, end:644) CALCULATED DISTANCE APART: -40662 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -1335763 <- tig#4, B=3747885 nt (start:2857527, end:2857548) A=3837743 nt (start:465405, end:465384) CALCULATED DISTANCE APART: -1335763 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#41 -> -2934207 <- tig#12, A=667251 nt (start:387942, end:387963) B=2766197 nt (start:2674898, end:2674877) CALCULATED DISTANCE APART: -2934207 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#3 -> -3661467 <- tig#r.56, A=3889482 nt (start:401877, end:401898) B=262460 nt (start:68598, end:68619) CALCULATED DISTANCE APART: -3661467 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#15 -> -8116131 <- tig#6, B=3712591 nt (start:343019, end:343040) A=6870868 nt (start:4766559, end:4766538) CALCULATED DISTANCE APART: -8116131 < -2000 Pairs unsatisfied in distance within a contig. Pair (CACACAAGGAACAGAGAACTC - AGCGTCTTTGACCGTATCATT) on contig 6 (6870868 nt) Astart:1138124 Aend:1138103 Bstart:1129697 Bend:1129718 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in pairing logic within a contig. Pair (TTCCTCCATTCCTCATGTTTT - TCTCCTACAATACCTCTCAGA) on contig 9 (3747885 nt) Astart:2878264 Aend:2878243 Bstart:2862901 Bend:2862880 Pairs unsatisfied in distance within a contig. Pair (TCATATATAGCATTTCTATTA - GACTAGTAATAAAGAGGGAAA) on contig 15 (3712591 nt) Astart:3350030 Aend:3350051 Bstart:3375018 Bend:3374997 CALCULATED DISTANCE APART: 24988 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#6 -> -3712398 <- tig#1, A=6870868 nt (start:5007467, end:5007488) B=4853111 nt (start:1868997, end:1868976) CALCULATED DISTANCE APART: -3712398 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259697, end:2259718) B=356404 nt (start:343527, end:343548) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#9 -> -3369808 <- tig#22, A=3747885 nt (start:358268, end:358289) B=1636463 nt (start:191, end:170) CALCULATED DISTANCE APART: -3369808 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.403 -> -2330792 <- tig#13, B=1321 nt (start:275, end:254) A=2650694 nt (start:2350517, end:2350496) CALCULATED DISTANCE APART: -2330792 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#167 -> -10398 <- tig#112, A=25236 nt (start:10194, end:10215) B=54810 nt (start:15356, end:15335) CALCULATED DISTANCE APART: -10398 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#167 -> -4804 <- tig#r.132, A=25236 nt (start:10194, end:10215) B=34686 nt (start:24924, end:24945) CALCULATED DISTANCE APART: -4804 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#167 -> -52238 <- tig#r.86, A=25236 nt (start:10194, end:10215) B=280231 nt (start:223035, end:223056) CALCULATED DISTANCE APART: -52238 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.74 -> -1813138 <- tig#17, B=238371 nt (start:59093, end:59072) A=1959065 nt (start:1774045, end:1774024) CALCULATED DISTANCE APART: -1813138 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#33 -> -492044 <- tig#32, A=1290487 nt (start:1235997, end:1236018) B=972151 nt (start:457554, end:457533) CALCULATED DISTANCE APART: -492044 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#127 -> -57440 <- tig#17, B=80830 nt (start:63125, end:63146) A=1959065 nt (start:59735, end:59714) CALCULATED DISTANCE APART: -57440 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#47 -> -293197 <- tig#6, A=471458 nt (start:171854, end:171875) B=6870868 nt (start:13593, end:13572) CALCULATED DISTANCE APART: -293197 < -2000 Pairs unsatisfied in distance within a contig. Pair (ACTGATGTCCTCCAGGTGATT - CCCAGTTTGTGGCTTCTCACA) on contig 13 (2650694 nt) Astart:1947420 Aend:1947441 Bstart:1963068 Bend:1963047 CALCULATED DISTANCE APART: 15648 Pairs unsatisfied in pairing logic within a contig. Pair (TGAGAAGCCTTTTTGGTGCTT - AGATTTGTGAGGACTTACACT) on contig 33 (1290487 nt) Astart:109127 Aend:109148 Bstart:244474 Bend:244495 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082757, end:2082778) B=976128 nt (start:960765, end:960786) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGACAGTAATCATGAGACCAA - TATTTATAAGGCAGACCGGAC) on contig 19 (3531543 nt) Astart:3058468 Aend:3058447 Bstart:3050252 Bend:3050231 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728303, end:728324) A=1096 nt (start:388, end:367) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12371, end:12350) A=91302 nt (start:11822, end:11801) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.35 -> -178167 <- tig#168, B=1135475 nt (start:196013, end:195992) A=13020 nt (start:2154, end:2133) CALCULATED DISTANCE APART: -178167 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460424, end:460403) A=1345436 nt (start:25236, end:25215) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33944, end:33923) A=855454 nt (start:18505, end:18484) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -621133 <- tig#r.66, A=2766197 nt (start:2129663, end:2129684) B=201913 nt (start:197314, end:197335) CALCULATED DISTANCE APART: -621133 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260512, end:2260533) B=356404 nt (start:342712, end:342733) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#10 -> -2964281 <- tig#103, B=3047199 nt (start:260900, end:260921) A=211876 nt (start:197982, end:197961) CALCULATED DISTANCE APART: -2964281 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16305, end:16284) A=1227811 nt (start:7510, end:7489) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#51 -> -175597 <- tig#r.90, A=875428 nt (start:751095, end:751116) B=112304 nt (start:41040, end:41061) CALCULATED DISTANCE APART: -175597 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.257 -> -2902765 <- tig#8, B=1995 nt (start:1906, end:1885) A=5070776 nt (start:2920859, end:2920838) CALCULATED DISTANCE APART: -2902765 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#2 -> -5315496 <- tig#53, B=5014909 nt (start:5208, end:5229) A=354284 nt (start:325795, end:325774) CALCULATED DISTANCE APART: -5315496 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.86 -> -528842 <- tig#53, B=280231 nt (start:223047, end:223026) A=354284 nt (start:325795, end:325774) CALCULATED DISTANCE APART: -528842 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCTTTTCCTTTTTCTCATCAA - GCTACGGAATGCGCTCAAGAG) on contig 43 (1235946 nt) Astart:243811 Aend:243790 Bstart:226401 Bend:226422 CALCULATED DISTANCE APART: 17410 Pairs unsatisfied in distance within a contig. Pair (GCTTTTGAGCATACACTCAAC - ATTTTTTATTTACCATTCATG) on contig 19 (3531543 nt) Astart:1348204 Aend:1348183 Bstart:1311059 Bend:1311080 CALCULATED DISTANCE APART: 37145 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219511, end:4219490) A=2598 nt (start:2110, end:2089) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -322558 <- tig#r.572, A=2650694 nt (start:2308920, end:2308941) B=1031 nt (start:247, end:268) CALCULATED DISTANCE APART: -322558 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460409, end:460388) A=1345436 nt (start:25251, end:25230) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#6 -> -3712398 <- tig#1, A=6870868 nt (start:5007547, end:5007568) B=4853111 nt (start:1869077, end:1869056) CALCULATED DISTANCE APART: -3712398 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#47 -> -293197 <- tig#6, A=471458 nt (start:171894, end:171915) B=6870868 nt (start:13633, end:13612) CALCULATED DISTANCE APART: -293197 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#86 -> -42790 <- tig#143, B=280231 nt (start:223027, end:223048) A=24293 nt (start:5586, end:5565) CALCULATED DISTANCE APART: -42790 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#125 -> -34981 <- tig#r.7, A=54013 nt (start:8947, end:8968) B=3534247 nt (start:3524332, end:3524353) CALCULATED DISTANCE APART: -34981 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460264, end:460243) A=1345436 nt (start:25396, end:25375) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGGAAAATGGATTGTACGAAA - CGTTCTTGAACCGATGCGATG) on contig 2 (5014909 nt) Astart:1268956 Aend:1268977 Bstart:1283618 Bend:1283597 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#119 -> -7707 <- tig#r.49, A=46878 nt (start:31970, end:31991) B=399963 nt (start:387164, end:387185) CALCULATED DISTANCE APART: -7707 < -2000 Pairs unsatisfied in distance within a contig. Pair (AATTAAAAATTTATAATGTTT - ACATTTAATGCACACCTTTTA) on contig 34 (1705564 nt) Astart:679459 Aend:679438 Bstart:664496 Bend:664517 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16815, end:16794) A=1227811 nt (start:7000, end:6979) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259387, end:2259408) B=356404 nt (start:343837, end:343858) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ACACATGTTTTCCGGCGTATA - TTCATTTGTATTCTTATAAAT) on contig 15 (3712591 nt) Astart:1717633 Aend:1717654 Bstart:1730385 Bend:1730406 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135793, end:135814) B=15068 nt (start:1883, end:1904) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATTGTGAATTTGTGTGAGTGC - AACACTTGAAGGGCCAGCAGA) on contig 30 (1050452 nt) Astart:650349 Aend:650370 Bstart:666115 Bend:666094 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#48 -> -585449 <- tig#46, A=487359 nt (start:41983, end:42004) B=577887 nt (start:160073, end:160052) CALCULATED DISTANCE APART: -585449 < -2000 Pairs unsatisfied in distance within a contig. Pair (ACCATGCCATTTCTTTTTGAT - TGAAATGTATTAGCTTGTGAT) on contig 37 (853709 nt) Astart:537762 Aend:537783 Bstart:550432 Bend:550411 CALCULATED DISTANCE APART: 12670 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -214292 <- tig#6, A=354284 nt (start:133410, end:133431) B=6870868 nt (start:13418, end:13397) CALCULATED DISTANCE APART: -214292 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ACGCAGACACAGAAACATAAA - GACCCACTCTTCGTCTTTATC) on contig 15 (3712591 nt) Astart:1716673 Aend:1716694 Bstart:1731345 Bend:1731366 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#26 -> -90650 <- tig#95, B=1332708 nt (start:1310683, end:1310704) A=92653 nt (start:88625, end:88604) CALCULATED DISTANCE APART: -90650 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#64 -> -210549 <- tig#109, B=211265 nt (start:462, end:483) A=66564 nt (start:19746, end:19725) CALCULATED DISTANCE APART: -210549 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -1335763 <- tig#4, B=3747885 nt (start:2857547, end:2857568) A=3837743 nt (start:465425, end:465404) CALCULATED DISTANCE APART: -1335763 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219541, end:4219520) A=2598 nt (start:2080, end:2059) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#48 -> -156052 <- tig#51, B=487359 nt (start:406406, end:406427) A=875428 nt (start:95099, end:95078) CALCULATED DISTANCE APART: -156052 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GTCCATGATTTGACTTGTGAA - GACATTGTTATCAGCATATTA) on contig 15 (3712591 nt) Astart:1717563 Aend:1717584 Bstart:1730455 Bend:1730476 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -4103886 <- tig#78, B=4628067 nt (start:3993715, end:3993694) A=184063 nt (start:130171, end:130150) CALCULATED DISTANCE APART: -4103886 < -2000 Pairs unsatisfied in distance within a contig. Pair (GCTTGGTATGGTGAAACTGTA - AAGTATTTCTCACATAAGCGA) on contig 5 (3689108 nt) Astart:1169802 Aend:1169823 Bstart:1184937 Bend:1184916 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -1168778 <- tig#384, A=5070776 nt (start:3882695, end:3882716) B=1359 nt (start:697, end:676) CALCULATED DISTANCE APART: -1168778 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#26 -> -90650 <- tig#95, B=1332708 nt (start:1310433, end:1310454) A=92653 nt (start:88375, end:88354) CALCULATED DISTANCE APART: -90650 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6228 <- tig#57, B=27696 nt (start:1569, end:1590) A=258385 nt (start:101, end:80) CALCULATED DISTANCE APART: -6228 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -958623 <- tig#30, A=1290536 nt (start:1184092, end:1184113) B=1050452 nt (start:872179, end:872158) CALCULATED DISTANCE APART: -958623 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CAGGACTCATTTGACTAACTT - ATATCTTTGATTTGAGACTAT) on contig 19 (3531543 nt) Astart:3058953 Aend:3058932 Bstart:3049767 Bend:3049746 Pairs unsatisfied in distance within a contig. Pair (TACTCGTCCTTGAACTTAGCA - GTTTATCCCCACCAGTAAAGT) on contig 15 (3712591 nt) Astart:3352452 Aend:3352473 Bstart:3377438 Bend:3377417 CALCULATED DISTANCE APART: 24986 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#47 -> -583213 <- tig#r.69, A=471458 nt (start:9863, end:9884) B=186132 nt (start:44514, end:44535) CALCULATED DISTANCE APART: -583213 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260987, end:2261008) B=356404 nt (start:342237, end:342258) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#5 -> -4262566 <- tig#25, B=3689108 nt (start:430196, end:430217) A=1290536 nt (start:1023654, end:1023633) CALCULATED DISTANCE APART: -4262566 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#13 -> -2068750 <- tig#11, A=2650694 nt (start:933282, end:933303) B=4628067 nt (start:371338, end:371317) CALCULATED DISTANCE APART: -2068750 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282587, end:282608) B=2196 nt (start:768, end:747) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#7 -> -3853079 <- tig#36, A=3534247 nt (start:146074, end:146095) B=855454 nt (start:484906, end:484885) CALCULATED DISTANCE APART: -3853079 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135273, end:135294) B=15068 nt (start:2403, end:2424) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTGCCTACAATGTTAATGGTT - TTCTTAGTCACTTTTGGAAAA) on contig 30 (1050452 nt) Astart:649604 Aend:649625 Bstart:665370 Bend:665349 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#48 -> -155720 <- tig#51, B=487359 nt (start:406063, end:406084) A=875428 nt (start:94424, end:94403) CALCULATED DISTANCE APART: -155720 < -2000 Pairs unsatisfied in distance within a contig. Pair (CGATTTCTTCAAAACCGAAGA - ATCCGTTTGTGGAGTAGATTA) on contig 19 (3531543 nt) Astart:1348184 Aend:1348163 Bstart:1311039 Bend:1311060 CALCULATED DISTANCE APART: 37145 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.17 -> -1813129 <- tig#74, B=1959065 nt (start:1774046, end:1774025) A=238371 nt (start:59083, end:59062) CALCULATED DISTANCE APART: -1813129 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282852, end:282873) B=2196 nt (start:1033, end:1012) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CTCAATGTCAAAGCCGAAAAC - AAATAAGTTTTAAAATTTGAG) on contig 53 (354284 nt) Astart:242994 Aend:242973 Bstart:340254 Bend:340275 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.38 -> -1309655 <- tig#33, B=1143067 nt (start:1037334, end:1037313) A=1290487 nt (start:292321, end:292300) CALCULATED DISTANCE APART: -1309655 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGTTGGAGATGCAGTGTTGTA - GAAAGAACAAAGAAATAGATA) on contig 5 (3689108 nt) Astart:1178572 Aend:1178551 Bstart:1163438 Bend:1163459 CALCULATED DISTANCE APART: 15134 Pairs unsatisfied in pairing logic within a contig. Pair (TCATTTTTCAATTCGACAGTA - GCCTGGACGAGTTGGAGAACA) on contig 15 (3712591 nt) Astart:1718038 Aend:1718059 Bstart:1729980 Bend:1730001 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2660, end:2681) A=258385 nt (start:1196, end:1175) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#53 -> -314812 <- tig#75, B=354284 nt (start:24609, end:24630) A=373953 nt (start:5137, end:5116) CALCULATED DISTANCE APART: -314812 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -322558 <- tig#r.572, A=2650694 nt (start:2308565, end:2308586) B=1031 nt (start:602, end:623) CALCULATED DISTANCE APART: -322558 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GCTTTTTGACCAGTAAATGTA - CTTTACTATCATCAATTCATA) on contig 15 (3712591 nt) Astart:1719168 Aend:1719189 Bstart:1728850 Bend:1728871 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#2 -> -4913721 <- tig#r.29, A=5014909 nt (start:1477664, end:1477685) B=1463708 nt (start:67232, end:67253) CALCULATED DISTANCE APART: -4913721 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#33 -> -492044 <- tig#32, A=1290487 nt (start:1235787, end:1235808) B=972151 nt (start:457344, end:457323) CALCULATED DISTANCE APART: -492044 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082817, end:2082838) B=976128 nt (start:960705, end:960726) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in distance within a contig. Pair (ACTATTACGAGGTTTTCAAAG - CTAGGACTAGAACATGAAAGG) on contig 30 (1050452 nt) Astart:649784 Aend:649805 Bstart:665550 Bend:665529 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#6 -> -3712398 <- tig#1, A=6870868 nt (start:5007472, end:5007493) B=4853111 nt (start:1869002, end:1868981) CALCULATED DISTANCE APART: -3712398 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#67 -> -163343 <- tig#51, B=197815 nt (start:180335, end:180356) A=875428 nt (start:165863, end:165842) CALCULATED DISTANCE APART: -163343 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16670, end:16649) A=1227811 nt (start:7145, end:7124) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#46 -> -3144173 <- tig#12, B=577887 nt (start:139428, end:139449) A=2766197 nt (start:2725714, end:2725693) CALCULATED DISTANCE APART: -3144173 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185949, end:4185928) A=3712591 nt (start:612, end:591) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAAGAGCAATGTGATAGATGC - TTATCAAAAGACGTCACAGTG) on contig 2 (5014909 nt) Astart:1268641 Aend:1268662 Bstart:1283303 Bend:1283282 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:1725, end:1746) A=258385 nt (start:261, end:240) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#118 -> -33564 <- tig#97, B=66247 nt (start:37957, end:37978) A=91050 nt (start:25274, end:25253) CALCULATED DISTANCE APART: -33564 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTGAACTCATTAGATTTAAGA - GAGATCGAAAAACATCAAAAA) on contig 19 (3531543 nt) Astart:3059371 Aend:3059350 Bstart:3049352 Bend:3049331 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -40662 <- tig#443, A=736718 nt (start:677051, end:677072) B=1213 nt (start:995, end:974) CALCULATED DISTANCE APART: -40662 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATGGGAGTGGAAAGAGCAATG - ACGTCACAGTGTATTCTTGAT) on contig 2 (5014909 nt) Astart:1268631 Aend:1268652 Bstart:1283293 Bend:1283272 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in pairing logic within a contig. Pair (TGACTTGTGAATGATGATACA - AGATTTTTAAGACATTGTTAT) on contig 15 (3712591 nt) Astart:1717573 Aend:1717594 Bstart:1730445 Bend:1730466 Pairs unsatisfied in distance within a contig. Pair (ATTATTAAATCGGCAGGTCTA - TTTATGATTTCATATTTCTAA) on contig 5 (3689108 nt) Astart:1169892 Aend:1169913 Bstart:1185027 Bend:1185006 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260422, end:2260443) B=356404 nt (start:342802, end:342823) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#207 -> -1387873 <- tig#19, B=5890 nt (start:449, end:470) A=3531543 nt (start:1402432, end:1402411) CALCULATED DISTANCE APART: -1387873 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136023, end:136044) B=15068 nt (start:1653, end:1674) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig. Pair (AACACTTGTTTCTTTCTTTCC - AAACAGTTACTTGAATTTAAT) on contig 6 (6870868 nt) Astart:1139129 Aend:1139108 Bstart:1130646 Bend:1130667 CALCULATED DISTANCE APART: 8483 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#84 -> -1659585 <- tig#34, A=197079 nt (start:196802, end:196823) B=1705564 nt (start:1679308, end:1679287) CALCULATED DISTANCE APART: -1659585 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#74 -> -453293 <- tig#r.47, A=238371 nt (start:73468, end:73489) B=471458 nt (start:163068, end:163089) CALCULATED DISTANCE APART: -453293 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3583 <- tig#26, B=1171658 nt (start:1171118, end:1171139) A=1332708 nt (start:23043, end:23022) CALCULATED DISTANCE APART: -3583 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.279 -> -1660901 <- tig#34, B=1777 nt (start:1599, end:1578) A=1705564 nt (start:1679302, end:1679281) CALCULATED DISTANCE APART: -1660901 < -2000 Pairs unsatisfied in distance within a contig. Pair (ACAGGTGAACAACGGAAGCAA - ATTGGTGGAGTTTCATTCATT) on contig 14 (2271162 nt) Astart:2001163 Aend:2001142 Bstart:1734396 Bend:1734417 CALCULATED DISTANCE APART: 266767 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#23 -> -893555 <- tig#101, A=1345436 nt (start:455660, end:455681) B=84691 nt (start:23779, end:23758) CALCULATED DISTANCE APART: -893555 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.4 -> -1331685 <- tig#8, B=3837743 nt (start:442238, end:442217) A=5070776 nt (start:909447, end:909426) CALCULATED DISTANCE APART: -1331685 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460884, end:460863) A=1345436 nt (start:24776, end:24755) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135968, end:135989) B=15068 nt (start:1708, end:1729) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTCACATTGACAGAGAAATGC - TTAAAAAAAACCTTAAAACTT) on contig 30 (1050452 nt) Astart:649469 Aend:649490 Bstart:665235 Bend:665214 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730447, end:730468) B=3531543 nt (start:3200021, end:3200000) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CTAATTCAGACAGAGAATGTT - ATTGCGCAAGAAATTTCATTT) on contig 19 (3531543 nt) Astart:3058068 Aend:3058047 Bstart:3050652 Bend:3050631 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185934, end:4185913) A=3712591 nt (start:627, end:606) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.521 -> -111708 <- tig#63, B=1100 nt (start:587, end:566) A=274372 nt (start:131121, end:131100) CALCULATED DISTANCE APART: -111708 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#590 -> -1631326 <- tig#r.34, A=1018 nt (start:602, end:623) B=1705564 nt (start:54654, end:54675) CALCULATED DISTANCE APART: -1631326 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:11966, end:11945) A=91302 nt (start:12227, end:12206) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -4201 <- tig#r.96, A=262460 nt (start:244436, end:244457) B=91302 nt (start:85125, end:85146) CALCULATED DISTANCE APART: -4201 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.21 -> -180145 <- tig#36, B=1811326 nt (start:180800, end:180779) A=855454 nt (start:19345, end:19324) CALCULATED DISTANCE APART: -180145 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185554, end:4185533) A=3712591 nt (start:1007, end:986) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GAGTTAAGCGAGTTGATTTAC - ATTGAAATAATACAATAATGC) on contig 15 (3712591 nt) Astart:1718673 Aend:1718694 Bstart:1729345 Bend:1729366 Pairs unsatisfied in distance within a contig. Pair (TTGTGTTTAAAAGACGGATAA - ACTTGCAACCTGGCTGCCTTA) on contig 37 (853709 nt) Astart:839104 Aend:839083 Bstart:823599 Bend:823620 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in distance within a contig. Pair (GCGATGAAAATCTATCGGGTT - GATTTTCATCGCCCATTCATC) on contig 95 (92653 nt) Astart:92485 Aend:92464 Bstart:92473 Bend:92494 CALCULATED DISTANCE APART: 12 Pairs unsatisfied in pairing logic within a contig. Pair (ATATATTGAACTCATTAGATT - CGAAAAACATCAAAAACGATA) on contig 19 (3531543 nt) Astart:3059376 Aend:3059355 Bstart:3049347 Bend:3049326 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260257, end:2260278) B=356404 nt (start:342967, end:342988) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ACCAGAAAAGATGCTCGTTGT - TTTCCGTACGTACCCGGAGGC) on contig 15 (3712591 nt) Astart:1718378 Aend:1718399 Bstart:1729640 Bend:1729661 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#19 -> -3098757 <- tig#47, A=3531543 nt (start:470156, end:470177) B=471458 nt (start:57370, end:57349) CALCULATED DISTANCE APART: -3098757 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTGGTGGACCCAATGGTTATA - CATCTCCAATTCATGTAATTA) on contig 1 (4853111 nt) Astart:345925 Aend:345946 Bstart:391202 Bend:391181 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -1168778 <- tig#384, A=5070776 nt (start:3883000, end:3883021) B=1359 nt (start:1002, end:981) CALCULATED DISTANCE APART: -1168778 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.125 -> -63259 <- tig#102, B=54013 nt (start:10134, end:10113) A=83426 nt (start:73125, end:73104) CALCULATED DISTANCE APART: -63259 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCTAAAAATCTGAACAATCAC - ACAATCAGTTGAATGTCGAGA) on contig 41 (667251 nt) Astart:89008 Aend:88987 Bstart:76328 Bend:76349 CALCULATED DISTANCE APART: 12680 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6228 <- tig#57, B=27696 nt (start:1499, end:1520) A=258385 nt (start:31, end:10) CALCULATED DISTANCE APART: -6228 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGAAGTGGTCTTGAGTACATG - CAGATCGGGAAAACAATGGGG) on contig 131 (36503 nt) Astart:30571 Aend:30550 Bstart:14202 Bend:14223 CALCULATED DISTANCE APART: 16369 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#6 -> -40181 <- tig#91, A=6870868 nt (start:6825697, end:6825718) B=101959 nt (start:15010, end:14989) CALCULATED DISTANCE APART: -40181 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#9 -> -3385457 <- tig#r.42, A=3747885 nt (start:435853, end:435874) B=659641 nt (start:566216, end:566237) CALCULATED DISTANCE APART: -3385457 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TAAATATATATATACATCCCA - AAGTCCAATATTTATGCAGTT) on contig 19 (3531543 nt) Astart:3059178 Aend:3059157 Bstart:3049542 Bend:3049521 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -40662 <- tig#443, A=736718 nt (start:676656, end:676677) B=1213 nt (start:600, end:579) CALCULATED DISTANCE APART: -40662 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.58 -> -1866109 <- tig#19, B=374416 nt (start:14236, end:14215) A=3531543 nt (start:1871873, end:1871852) CALCULATED DISTANCE APART: -1866109 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082347, end:2082368) B=976128 nt (start:961175, end:961196) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.1 -> -4590180 <- tig#16, B=4853111 nt (start:3208342, end:3208321) A=2098954 nt (start:1401838, end:1401817) CALCULATED DISTANCE APART: -4590180 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#125 -> -41626 <- tig#122, A=54013 nt (start:8634, end:8655) B=43035 nt (start:16247, end:16226) CALCULATED DISTANCE APART: -41626 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#127 -> -57440 <- tig#17, B=80830 nt (start:63130, end:63151) A=1959065 nt (start:59740, end:59719) CALCULATED DISTANCE APART: -57440 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#173 -> -6636294 <- tig#6, A=11377 nt (start:10258, end:10279) B=6870868 nt (start:6655175, end:6655154) CALCULATED DISTANCE APART: -6636294 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#81 -> -2917593 <- tig#r.7, A=258617 nt (start:239580, end:239601) B=3534247 nt (start:615691, end:615712) CALCULATED DISTANCE APART: -2917593 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#28 -> -1192347 <- tig#53, A=1171658 nt (start:256476, end:256497) B=354284 nt (start:297165, end:297144) CALCULATED DISTANCE APART: -1192347 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GATGCACGAGTAAGATTAAAG - AATAAGTCAATAACACATTAC) on contig 19 (3531543 nt) Astart:3059123 Aend:3059102 Bstart:3049597 Bend:3049576 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#6 -> -3712398 <- tig#1, A=6870868 nt (start:5007562, end:5007583) B=4853111 nt (start:1869092, end:1869071) CALCULATED DISTANCE APART: -3712398 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#58 -> -2921458 <- tig#3, B=374416 nt (start:186461, end:186482) A=3889482 nt (start:2753503, end:2753482) CALCULATED DISTANCE APART: -2921458 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -3661471 <- tig#r.3, A=262460 nt (start:68588, end:68609) B=3889482 nt (start:401883, end:401904) CALCULATED DISTANCE APART: -3661471 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AAAGAAGGAACCTAGGGTTAA - TTTAAAACATGGTAATTAGGA) on contig 14 (2271162 nt) Astart:658361 Aend:658340 Bstart:495550 Bend:495529 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260492, end:2260513) B=356404 nt (start:342732, end:342753) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082827, end:2082848) B=976128 nt (start:960695, end:960716) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282207, end:282228) B=2196 nt (start:388, end:367) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#48 -> -3151835 <- tig#12, B=487359 nt (start:39478, end:39499) A=2766197 nt (start:2723954, end:2723933) CALCULATED DISTANCE APART: -3151835 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCAATATATAATTTTGAGAAG - GGCGGAATGAGTTTGGATTGG) on contig 71 (271268 nt) Astart:124129 Aend:124108 Bstart:118761 Bend:118782 CALCULATED DISTANCE APART: 5368 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#33 -> -492044 <- tig#32, A=1290487 nt (start:1235707, end:1235728) B=972151 nt (start:457264, end:457243) CALCULATED DISTANCE APART: -492044 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#119 -> -7707 <- tig#r.49, A=46878 nt (start:31940, end:31961) B=399963 nt (start:387194, end:387215) CALCULATED DISTANCE APART: -7707 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459299, end:459278) A=1345436 nt (start:26361, end:26340) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.41 -> -954029 <- tig#17, B=667251 nt (start:483425, end:483404) A=1959065 nt (start:490604, end:490583) CALCULATED DISTANCE APART: -954029 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#7 -> -3853079 <- tig#36, A=3534247 nt (start:146169, end:146190) B=855454 nt (start:485001, end:484980) CALCULATED DISTANCE APART: -3853079 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282337, end:282358) B=2196 nt (start:518, end:497) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.135 -> -21950 <- tig#23, B=39094 nt (start:37723, end:37702) A=1345436 nt (start:4227, end:4206) CALCULATED DISTANCE APART: -21950 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.48 -> -3108447 <- tig#12, B=487359 nt (start:404718, end:404697) A=2766197 nt (start:2723729, end:2723708) CALCULATED DISTANCE APART: -3108447 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGAAAACCTAAATATAAATAA - TGAGAGCTTTTGGAGAAAATC) on contig 34 (1705564 nt) Astart:679734 Aend:679713 Bstart:664771 Bend:664792 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in pairing logic within a contig. Pair (TTGCAATATATAGTAAAATAT - TCGGCGATGAGTCGAGGATCC) on contig 19 (3531543 nt) Astart:3060386 Aend:3060365 Bstart:3048337 Bend:3048316 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#6 -> -1309140 <- tig#11, B=6870868 nt (start:6432673, end:6432694) A=4628067 nt (start:890945, end:890924) CALCULATED DISTANCE APART: -1309140 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#112 -> -911051 <- tig#11, B=54810 nt (start:14704, end:14725) A=4628067 nt (start:890945, end:890924) CALCULATED DISTANCE APART: -911051 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082442, end:2082463) B=976128 nt (start:961080, end:961101) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.42 -> -1433157 <- tig#20, B=659641 nt (start:2393, end:2372) A=2328057 nt (start:1450764, end:1450743) CALCULATED DISTANCE APART: -1433157 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10208, end:10187) A=2766197 nt (start:2151355, end:2151334) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGATATTAAATATGTTTTCGA - TCTTAAGATTATAAGAAAGGG) on contig 19 (3531543 nt) Astart:3058503 Aend:3058482 Bstart:3050217 Bend:3050196 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#46 -> -3500669 <- tig#6, A=577887 nt (start:567070, end:567091) B=6870868 nt (start:3509852, end:3509831) CALCULATED DISTANCE APART: -3500669 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#265 -> -3126344 <- tig#4, A=1946 nt (start:1766, end:1787) B=3837743 nt (start:3146164, end:3146143) CALCULATED DISTANCE APART: -3126344 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTTGCCAATTAAGCTAGCTAG - CTTTCCAAACATACCAAAGAA) on contig 19 (3531543 nt) Astart:3059856 Aend:3059835 Bstart:3048867 Bend:3048846 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260172, end:2260193) B=356404 nt (start:343052, end:343073) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ACAATAATCTCTCTTTTTCTT - ATTGGACAAAACCCAAACTTG) on contig 19 (3531543 nt) Astart:3059996 Aend:3059975 Bstart:3048727 Bend:3048706 Pairs unsatisfied in distance within a contig. Pair (AGTGGAAAGAGCAATGTGATA - AAAAGACGTCACAGTGTATTC) on contig 2 (5014909 nt) Astart:1268636 Aend:1268657 Bstart:1283298 Bend:1283277 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#342 -> -576944 <- tig#43, B=1467 nt (start:1445, end:1466) A=1235946 nt (start:596922, end:596901) CALCULATED DISTANCE APART: -576944 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12596, end:12575) A=91302 nt (start:11597, end:11576) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -214279 <- tig#6, A=354284 nt (start:132393, end:132414) B=6870868 nt (start:12388, end:12367) CALCULATED DISTANCE APART: -214279 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATACGTGAAGAGCTCTCCGCC - ACTTCAATAGAGAGATCTTCT) on contig 1 (4853111 nt) Astart:346020 Aend:346041 Bstart:391297 Bend:391276 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460494, end:460473) A=1345436 nt (start:25166, end:25145) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259232, end:2259253) B=356404 nt (start:343992, end:344013) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGTAAGAAAAATTAGATGATT - GGATGCTTTTCAGGAACTCAA) on contig 131 (36503 nt) Astart:30922 Aend:30901 Bstart:14552 Bend:14573 CALCULATED DISTANCE APART: 16370 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#433 -> -944078 <- tig#r.29, A=1238 nt (start:486, end:507) B=1463708 nt (start:500382, end:500403) CALCULATED DISTANCE APART: -944078 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.34 -> -1659889 <- tig#279, B=1705564 nt (start:1679303, end:1679282) A=1777 nt (start:586, end:565) CALCULATED DISTANCE APART: -1659889 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#3 -> -3661461 <- tig#r.56, A=3889482 nt (start:401874, end:401895) B=262460 nt (start:68607, end:68628) CALCULATED DISTANCE APART: -3661461 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#8 -> -3464017 <- tig#r.65, A=5070776 nt (start:1616953, end:1616974) B=286124 nt (start:255930, end:255951) CALCULATED DISTANCE APART: -3464017 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATTTTCAGTTATGTAATATCC - TTTCCCTAACTTCCTTAACCA) on contig 1 (4853111 nt) Astart:345716 Aend:345737 Bstart:390982 Bend:390961 CALCULATED DISTANCE APART: 45266 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3583 <- tig#26, B=1171658 nt (start:1171198, end:1171219) A=1332708 nt (start:23123, end:23102) CALCULATED DISTANCE APART: -3583 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CTCATTAGATTTAAGAAAAGG - AATGTGAGATCGAAAAACATC) on contig 19 (3531543 nt) Astart:3059366 Aend:3059345 Bstart:3049357 Bend:3049336 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.35 -> -1089913 <- tig#25, B=1135475 nt (start:196328, end:196307) A=1290536 nt (start:913585, end:913564) CALCULATED DISTANCE APART: -1089913 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728903, end:728924) A=1096 nt (start:988, end:967) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -322558 <- tig#r.572, A=2650694 nt (start:2308600, end:2308621) B=1031 nt (start:567, end:588) CALCULATED DISTANCE APART: -322558 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460034, end:460013) A=1345436 nt (start:25626, end:25605) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -1335763 <- tig#4, B=3747885 nt (start:2857647, end:2857668) A=3837743 nt (start:465525, end:465504) CALCULATED DISTANCE APART: -1335763 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CCAAACACTATGAACAGAATG - ATATAATTTATTCACGTTAAT) on contig 19 (3531543 nt) Astart:3058978 Aend:3058957 Bstart:3049742 Bend:3049721 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -621133 <- tig#r.66, A=2766197 nt (start:2129403, end:2129424) B=201913 nt (start:197574, end:197595) CALCULATED DISTANCE APART: -621133 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#213 -> -6849826 <- tig#6, A=5391 nt (start:334, end:355) B=6870868 nt (start:6864769, end:6864748) CALCULATED DISTANCE APART: -6849826 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12561, end:12540) A=91302 nt (start:11632, end:11611) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#342 -> -576943 <- tig#43, B=1467 nt (start:1331, end:1352) A=1235946 nt (start:596807, end:596786) CALCULATED DISTANCE APART: -576943 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTATTGATTCGGAAAATTAGA - AGAAAGCACTAAACCCTTATA) on contig 2 (5014909 nt) Astart:1268561 Aend:1268582 Bstart:1283223 Bend:1283202 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#52 -> -353986 <- tig#1, B=356404 nt (start:114, end:135) A=4853111 nt (start:17696, end:17675) CALCULATED DISTANCE APART: -353986 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082422, end:2082443) B=976128 nt (start:961100, end:961121) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#127 -> -717436 <- tig#r.33, A=80830 nt (start:20146, end:20167) B=1290487 nt (start:613735, end:613756) CALCULATED DISTANCE APART: -717436 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATTGGGTCTTTCTATTCCCAA - CCTCCATAAATGTGGTCGTAG) on contig 5 (3689108 nt) Astart:1170002 Aend:1170023 Bstart:1185137 Bend:1185116 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#175 -> -2741574 <- tig#3, B=11120 nt (start:2759, end:2780) A=3889482 nt (start:2753213, end:2753192) CALCULATED DISTANCE APART: -2741574 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082367, end:2082388) B=976128 nt (start:961155, end:961176) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTTTAATGGGTCAAAATTATT - GAAGAAATTAAACCTGGGAGC) on contig 1 (4853111 nt) Astart:345965 Aend:345986 Bstart:391242 Bend:391221 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33654, end:33633) A=855454 nt (start:18795, end:18774) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAAATATATACAATTCACATC - AATGTAATTATAATGAACAAG) on contig 37 (853709 nt) Astart:838664 Aend:838643 Bstart:823159 Bend:823180 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:1730, end:1751) A=258385 nt (start:266, end:245) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCTGTAATCAAACGTTTAATT - TGGGACCAGAAGGAGGTGAAA) on contig 14 (2271162 nt) Astart:1739907 Aend:1739928 Bstart:2002479 Bend:2002458 CALCULATED DISTANCE APART: 262572 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#146 -> -3213 <- tig#109, B=21489 nt (start:5785, end:5806) A=66564 nt (start:7509, end:7488) CALCULATED DISTANCE APART: -3213 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16590, end:16569) A=1227811 nt (start:7225, end:7204) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#34 -> -2271847 <- tig#31, A=1705564 nt (start:173947, end:173968) B=976128 nt (start:760230, end:760209) CALCULATED DISTANCE APART: -2271847 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3583 <- tig#26, B=1171658 nt (start:1171433, end:1171454) A=1332708 nt (start:23358, end:23337) CALCULATED DISTANCE APART: -3583 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33859, end:33838) A=855454 nt (start:18590, end:18569) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#120 -> -1341554 <- tig#29, B=44710 nt (start:43397, end:43418) A=1463708 nt (start:1360241, end:1360220) CALCULATED DISTANCE APART: -1341554 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.1 -> -4590186 <- tig#16, B=4853111 nt (start:3207767, end:3207746) A=2098954 nt (start:1402419, end:1402398) CALCULATED DISTANCE APART: -4590186 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#19 -> -5298475 <- tig#r.11, A=3531543 nt (start:2694050, end:2694071) B=4628067 nt (start:147085, end:147106) CALCULATED DISTANCE APART: -5298475 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGTCTTATGCTTTCTTTCATT - AAAGTAACTTACAGTCTAGTC) on contig 4 (3837743 nt) Astart:2358096 Aend:2358117 Bstart:2359966 Bend:2359987 Pairs unsatisfied in distance within a contig. Pair (GATGGATGTGATGAAGAAGTT - ACACGCCTGAAATACACTTAA) on contig 1 (4853111 nt) Astart:346395 Aend:346416 Bstart:391672 Bend:391651 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260827, end:2260848) B=356404 nt (start:342397, end:342418) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728503, end:728524) A=1096 nt (start:588, end:567) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136203, end:136224) B=15068 nt (start:1473, end:1494) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTCTGTCATTTGTTTTAGAAC - AAGATATCTAACATGAATTTG) on contig 7 (3534247 nt) Astart:2255387 Aend:2255366 Bstart:2239389 Bend:2239368 Pairs unsatisfied in distance within a contig. Pair (GAGGTTTTAGAACGTTTTCGA - GAGCTGTATTGAACACTAAGA) on contig 1 (4853111 nt) Astart:346590 Aend:346611 Bstart:391867 Bend:391846 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in pairing logic within a contig. Pair (ATACCAAAAATAAGAAATAAA - AGCTTGACTGGCCTTCTCTTG) on contig 7 (3534247 nt) Astart:725273 Aend:725294 Bstart:730888 Bend:730909 Pairs unsatisfied in pairing logic within a contig. Pair (CTTGTGTGTGTGATCTCTCTC - TAGTCCCGGACCGAGAAAGAA) on contig 15 (3712591 nt) Astart:1792081 Aend:1792060 Bstart:2056142 Bend:2056163 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#12 -> -245458 <- tig#56, A=2766197 nt (start:2696533, end:2696554) B=262460 nt (start:195794, end:195773) CALCULATED DISTANCE APART: -245458 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185944, end:4185923) A=3712591 nt (start:617, end:596) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#2 -> -4999288 <- tig#r.132, A=5014909 nt (start:5230, end:5251) B=34686 nt (start:25077, end:25098) CALCULATED DISTANCE APART: -4999288 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#33 -> -492044 <- tig#32, A=1290487 nt (start:1235532, end:1235553) B=972151 nt (start:457089, end:457068) CALCULATED DISTANCE APART: -492044 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGGAAGTACGATTTTCCGGTG - TAGATTCCCATTGGTTCCTAT) on contig 1 (4853111 nt) Astart:346240 Aend:346261 Bstart:391517 Bend:391496 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#37 -> -738605 <- tig#r.53, A=853709 nt (start:109429, end:109450) B=354284 nt (start:339959, end:339980) CALCULATED DISTANCE APART: -738605 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2965, end:2986) A=258385 nt (start:1501, end:1480) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#11 -> -4381731 <- tig#79, A=4628067 nt (start:266812, end:266833) B=136600 nt (start:40476, end:40455) CALCULATED DISTANCE APART: -4381731 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459759, end:459738) A=1345436 nt (start:25901, end:25880) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33894, end:33873) A=855454 nt (start:18555, end:18534) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TAGATTTTCGGTATGTATGAT - TTAAGAACATTTCTTACGAAT) on contig 19 (3531543 nt) Astart:3058158 Aend:3058137 Bstart:3050562 Bend:3050541 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#32 -> -1548141 <- tig#35, B=972151 nt (start:167696, end:167717) A=1135475 nt (start:763686, end:763665) CALCULATED DISTANCE APART: -1548141 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#265 -> -3126344 <- tig#4, A=1946 nt (start:1801, end:1822) B=3837743 nt (start:3146199, end:3146178) CALCULATED DISTANCE APART: -3126344 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#6 -> -3712398 <- tig#1, A=6870868 nt (start:5007567, end:5007588) B=4853111 nt (start:1869097, end:1869076) CALCULATED DISTANCE APART: -3712398 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135248, end:135269) B=15068 nt (start:2428, end:2449) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#19 -> -9908551 <- tig#6, A=3531543 nt (start:469426, end:469447) B=6870868 nt (start:6866434, end:6866413) CALCULATED DISTANCE APART: -9908551 < -2000 Pairs unsatisfied in distance within a contig. Pair (CGAGGATTGCCGTGATGTTGA - GCAGTGAAGAGCTGGGAAAAG) on contig 37 (853709 nt) Astart:839059 Aend:839038 Bstart:823554 Bend:823575 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.114 -> -6284788 <- tig#6, B=54818 nt (start:8075, end:8054) A=6870868 nt (start:6296713, end:6296692) CALCULATED DISTANCE APART: -6284788 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATTTCTACTTTTATCTTCTCT - CGATCTGATAATCTTATCACG) on contig 3 (3889482 nt) Astart:2808548 Aend:2808527 Bstart:2767910 Bend:2767889 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -40662 <- tig#443, A=736718 nt (start:676971, end:676992) B=1213 nt (start:915, end:894) CALCULATED DISTANCE APART: -40662 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.53 -> -813975 <- tig#7, B=354284 nt (start:181263, end:181242) A=3534247 nt (start:652712, end:652691) CALCULATED DISTANCE APART: -813975 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136048, end:136069) B=15068 nt (start:1628, end:1649) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTTAGAACTTCTATGTTTAAA - AGTCTCGAGAGAACGTGCTTG) on contig 41 (667251 nt) Astart:88048 Aend:88027 Bstart:75368 Bend:75389 CALCULATED DISTANCE APART: 12680 Pairs unsatisfied in pairing logic within a contig. Pair (AGGTCCGGAGGATTCGGGTCG - GGTTTAATAAAAATCATATAA) on contig 15 (3712591 nt) Astart:1718203 Aend:1718224 Bstart:1729815 Bend:1729836 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#84 -> -1659560 <- tig#34, A=197079 nt (start:196816, end:196837) B=1705564 nt (start:1679297, end:1679276) CALCULATED DISTANCE APART: -1659560 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2885, end:2906) A=258385 nt (start:1421, end:1400) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460319, end:460298) A=1345436 nt (start:25341, end:25320) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460349, end:460328) A=1345436 nt (start:25311, end:25290) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.74 -> -1813072 <- tig#17, B=238371 nt (start:59033, end:59012) A=1959065 nt (start:1774039, end:1774018) CALCULATED DISTANCE APART: -1813072 < -2000 Pairs unsatisfied in distance within a contig. Pair (TAACTACTCAAGGGAAATTCA - TCCTCAATGCAAGGTAGACAT) on contig 14 (2271162 nt) Astart:1978614 Aend:1978635 Bstart:2002784 Bend:2002763 CALCULATED DISTANCE APART: 24170 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136098, end:136119) B=15068 nt (start:1578, end:1599) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#57 -> -4506482 <- tig#r.11, A=258385 nt (start:255916, end:255937) B=4628067 nt (start:104054, end:104075) CALCULATED DISTANCE APART: -4506482 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730837, end:730858) B=3531543 nt (start:3200411, end:3200390) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TGCCGGAGAACGCAGAGGCGC - TTTTAAGTATTACTAGTATTT) on contig 15 (3712591 nt) Astart:1716593 Aend:1716614 Bstart:1731425 Bend:1731446 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#19 -> -2666310 <- tig#74, A=3531543 nt (start:871655, end:871676) B=238371 nt (start:26422, end:26401) CALCULATED DISTANCE APART: -2666310 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#19 -> -2666312 <- tig#74, A=3531543 nt (start:871655, end:871676) B=238371 nt (start:26424, end:26403) CALCULATED DISTANCE APART: -2666312 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGGATGAGAGTAATGAAGAGT - ACAAGATCGCTTTCACGACTG) on contig 2 (5014909 nt) Astart:1269841 Aend:1269862 Bstart:1284503 Bend:1284482 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig. Pair (CTTGGATTTCTGCAAGAAAAA - GTGACAGCGCTGTGAATGACA) on contig 27 (1227811 nt) Astart:434530 Aend:434551 Bstart:450783 Bend:450762 CALCULATED DISTANCE APART: 16253 Pairs unsatisfied in distance within a contig. Pair (ACTTATTGTTCTGTTATTGTT - TGTCGATCGACATCTCTGTTG) on contig 41 (667251 nt) Astart:88403 Aend:88382 Bstart:75723 Bend:75744 CALCULATED DISTANCE APART: 12680 Pairs unsatisfied in distance within a contig. Pair (AACAACCGTTTCTTGATTCTT - ATATATACCATGTGAACTATT) on contig 2 (5014909 nt) Astart:1269111 Aend:1269132 Bstart:1283773 Bend:1283752 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728468, end:728489) A=1096 nt (start:553, end:532) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#33 -> -492044 <- tig#32, A=1290487 nt (start:1235782, end:1235803) B=972151 nt (start:457339, end:457318) CALCULATED DISTANCE APART: -492044 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#1 -> -4220727 <- tig#r.10, A=4853111 nt (start:1841119, end:1841140) B=3047199 nt (start:1818464, end:1818485) CALCULATED DISTANCE APART: -4220727 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#33 -> -3182921 <- tig#3, B=1290487 nt (start:840734, end:840755) A=3889482 nt (start:2753168, end:2753147) CALCULATED DISTANCE APART: -3182921 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#173 -> -6636294 <- tig#6, A=11377 nt (start:10468, end:10489) B=6870868 nt (start:6655385, end:6655364) CALCULATED DISTANCE APART: -6636294 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#25 -> -368777 <- tig#2, B=1290536 nt (start:975285, end:975306) A=5014909 nt (start:73526, end:73505) CALCULATED DISTANCE APART: -368777 < -2000 Pairs unsatisfied in distance within a contig. Pair (GAAGTCTAATCTCAAATGCAC - TCAAACAATAGCTACAGCCAT) on contig 6 (6870868 nt) Astart:1138144 Aend:1138123 Bstart:1129717 Bend:1129738 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#20 -> -4734338 <- tig#9, A=2328057 nt (start:42190, end:42211) B=3747885 nt (start:2468471, end:2468450) CALCULATED DISTANCE APART: -4734338 < -2000 Pairs unsatisfied in distance within a contig. Pair (ACCAATCAATCTTCTTGAAAC - TAGATCAATACATGTTTTAGA) on contig 5 (3689108 nt) Astart:1178372 Aend:1178351 Bstart:1163238 Bend:1163259 CALCULATED DISTANCE APART: 15134 Pairs unsatisfied in distance within a contig. Pair (TCGCTGCTGCGAAAGAGAGGA - TTCGGATCGACATTTTTGTCA) on contig 1 (4853111 nt) Astart:346810 Aend:346831 Bstart:392087 Bend:392066 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#7 -> -3853079 <- tig#36, A=3534247 nt (start:146149, end:146170) B=855454 nt (start:484981, end:484960) CALCULATED DISTANCE APART: -3853079 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#33 -> -492044 <- tig#32, A=1290487 nt (start:1235577, end:1235598) B=972151 nt (start:457134, end:457113) CALCULATED DISTANCE APART: -492044 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#175 -> -2741574 <- tig#3, B=11120 nt (start:2754, end:2775) A=3889482 nt (start:2753208, end:2753187) CALCULATED DISTANCE APART: -2741574 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ACTCTCTCGCCGATGTATCAC - TGGTGCTCTTTGACAAAAGGT) on contig 16 (2098954 nt) Astart:726865 Aend:726844 Bstart:1188162 Bend:1188183 Pairs unsatisfied in pairing logic within a contig. Pair (GATATACAATTAACGAAGAAC - AGCAAAAAATTCTATATATTA) on contig 19 (3531543 nt) Astart:3059208 Aend:3059187 Bstart:3049512 Bend:3049491 Pairs unsatisfied in pairing logic within a contig. Pair (GACATGGATTCTTCGAGGCCT - TCTCGGACCTGGTCGACGATT) on contig 54 (625914 nt) Astart:36323 Aend:36302 Bstart:37309 Bend:37330 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -4201 <- tig#r.96, A=262460 nt (start:244341, end:244362) B=91302 nt (start:85220, end:85241) CALCULATED DISTANCE APART: -4201 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#28 -> -999885 <- tig#51, A=1171658 nt (start:256346, end:256367) B=875428 nt (start:104573, end:104552) CALCULATED DISTANCE APART: -999885 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#39 -> -500696 <- tig#r.30, A=736718 nt (start:679371, end:679392) B=1050452 nt (start:587103, end:587124) CALCULATED DISTANCE APART: -500696 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#7 -> -5463086 <- tig#r.10, A=3534247 nt (start:705471, end:705492) B=3047199 nt (start:392889, end:392910) CALCULATED DISTANCE APART: -5463086 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTACTATGAATGTAAATGTAT - TAGATGTATAAAACAGTAAGC) on contig 37 (853709 nt) Astart:838599 Aend:838578 Bstart:823094 Bend:823115 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -322558 <- tig#r.572, A=2650694 nt (start:2308955, end:2308976) B=1031 nt (start:212, end:233) CALCULATED DISTANCE APART: -322558 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#25 -> -666259 <- tig#2, B=1290536 nt (start:852902, end:852923) A=5014909 nt (start:248625, end:248604) CALCULATED DISTANCE APART: -666259 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTTCTTTATAATTGAGGAAAA - GTCTTTCATCCAGGTGCCAGA) on contig 6 (6870868 nt) Astart:1138274 Aend:1138253 Bstart:1129847 Bend:1129868 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#7 -> -3853079 <- tig#36, A=3534247 nt (start:146099, end:146120) B=855454 nt (start:484931, end:484910) CALCULATED DISTANCE APART: -3853079 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#2 -> -4999893 <- tig#167, A=5014909 nt (start:5228, end:5249) B=25236 nt (start:10212, end:10191) CALCULATED DISTANCE APART: -4999893 < -2000 Pairs unsatisfied in distance within a contig. Pair (TACGAGGTTTTCAAAGTTGTA - ATTGCCTAGGACTAGAACATG) on contig 30 (1050452 nt) Astart:649789 Aend:649810 Bstart:665555 Bend:665534 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in pairing logic within a contig. Pair (GATGGGTTTACTATTTTGTCT - ACTTCTGTCACGTAAGTGCTA) on contig 4 (3837743 nt) Astart:2358466 Aend:2358487 Bstart:2359596 Bend:2359617 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -1168778 <- tig#384, A=5070776 nt (start:3882140, end:3882161) B=1359 nt (start:142, end:121) CALCULATED DISTANCE APART: -1168778 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTTGCTCATGACTCAAGAACA - GGTTCCATTCTTCTTCTGAAG) on contig 1 (4853111 nt) Astart:346665 Aend:346686 Bstart:391942 Bend:391921 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -418494 <- tig#46, A=736718 nt (start:457857, end:457878) B=577887 nt (start:159633, end:159612) CALCULATED DISTANCE APART: -418494 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260117, end:2260138) B=356404 nt (start:343107, end:343128) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.257 -> -2902765 <- tig#8, B=1995 nt (start:1716, end:1695) A=5070776 nt (start:2921049, end:2921028) CALCULATED DISTANCE APART: -2902765 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33339, end:33318) A=855454 nt (start:19110, end:19089) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#63 -> -674573 <- tig#r.13, A=274372 nt (start:184431, end:184452) B=2650694 nt (start:2046062, end:2046083) CALCULATED DISTANCE APART: -674573 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -40662 <- tig#443, A=736718 nt (start:676346, end:676367) B=1213 nt (start:290, end:269) CALCULATED DISTANCE APART: -40662 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ACCAGGACAGTCCAAGGTTCT - CAAATTGGCATGGTGTTGAGT) on contig 48 (487359 nt) Astart:38432 Aend:38453 Bstart:385542 Bend:385563 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.403 -> -2330792 <- tig#13, B=1321 nt (start:320, end:299) A=2650694 nt (start:2350472, end:2350451) CALCULATED DISTANCE APART: -2330792 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTGGAGTTTCTGTACAGTTTG - GCAAACATTTCAGAGACAAAA) on contig 2 (5014909 nt) Astart:1268836 Aend:1268857 Bstart:1283498 Bend:1283477 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig. Pair (TCCGGAAGAAGTAGAGAGAGT - AACCAAGAAATGAGTAACATA) on contig 1 (4853111 nt) Astart:346475 Aend:346496 Bstart:391752 Bend:391731 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig. Pair (GGCTAGCTCTTGATAAAGCTG - AGGATTTTAAATGAACGGAAT) on contig 5 (3689108 nt) Astart:1171717 Aend:1171738 Bstart:1186853 Bend:1186832 CALCULATED DISTANCE APART: 15136 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#147 -> -2122509 <- tig#6, A=21323 nt (start:6663, end:6684) B=6870868 nt (start:2127849, end:2127828) CALCULATED DISTANCE APART: -2122509 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#33 -> -492044 <- tig#32, A=1290487 nt (start:1235922, end:1235943) B=972151 nt (start:457479, end:457458) CALCULATED DISTANCE APART: -492044 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.6 -> -304848 <- tig#54, B=6870868 nt (start:12278, end:12257) A=625914 nt (start:312570, end:312549) CALCULATED DISTANCE APART: -304848 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CTGGTCAACACGGTTCTTCTT - AAAAATGGAAAACACCACAAT) on contig 15 (3712591 nt) Astart:1716998 Aend:1717019 Bstart:1731020 Bend:1731041 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -214292 <- tig#6, A=354284 nt (start:133305, end:133326) B=6870868 nt (start:13313, end:13292) CALCULATED DISTANCE APART: -214292 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#46 -> -3500665 <- tig#6, B=577887 nt (start:567135, end:567156) A=6870868 nt (start:3509913, end:3509892) CALCULATED DISTANCE APART: -3500665 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#37 -> -4025641 <- tig#r.2, A=853709 nt (start:537677, end:537698) B=5014909 nt (start:1285300, end:1285321) CALCULATED DISTANCE APART: -4025641 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATTATACAAAATCTAGTAGTT - CACGTAATATATTGTAAAGAA) on contig 19 (3531543 nt) Astart:3060406 Aend:3060385 Bstart:3048317 Bend:3048296 Pairs unsatisfied in distance within a contig. Pair (AGCGGCCTACGTGCAAATGCT - CTCTTTCATGGTTGTTAGCGG) on contig 19 (3531543 nt) Astart:1348159 Aend:1348138 Bstart:1311014 Bend:1311035 CALCULATED DISTANCE APART: 37145 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259152, end:2259173) B=356404 nt (start:344072, end:344093) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.6 -> -5416206 <- tig#35, B=6870868 nt (start:4672190, end:4672169) A=1135475 nt (start:764016, end:763995) CALCULATED DISTANCE APART: -5416206 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136028, end:136049) B=15068 nt (start:1648, end:1669) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig. Pair (AATTGTTTCTTTGTTATCAAA - CCTCATTTCTCCTATATGGAG) on contig 5 (3689108 nt) Astart:1169562 Aend:1169583 Bstart:1184697 Bend:1184676 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728368, end:728389) A=1096 nt (start:453, end:432) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTACACCTAATATGATGACTT - GGCTTCTCTGCAATGACCTCC) on contig 1 (4853111 nt) Astart:346975 Aend:346996 Bstart:392252 Bend:392231 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#433 -> -944078 <- tig#r.29, A=1238 nt (start:481, end:502) B=1463708 nt (start:500387, end:500408) CALCULATED DISTANCE APART: -944078 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#119 -> -7707 <- tig#r.49, A=46878 nt (start:32125, end:32146) B=399963 nt (start:387009, end:387030) CALCULATED DISTANCE APART: -7707 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728433, end:728454) A=1096 nt (start:518, end:497) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730432, end:730453) B=3531543 nt (start:3200006, end:3199985) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33909, end:33888) A=855454 nt (start:18540, end:18519) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AATAGGCTAAACCATAGTAAC - TAGTAATTTTTGAAAGACAGA) on contig 19 (3531543 nt) Astart:3058228 Aend:3058207 Bstart:3050492 Bend:3050471 Pairs unsatisfied in pairing logic within a contig. Pair (TGATCGCTCCACCATCATGAC - CGGTCGCAGACCAGAGAATTT) on contig 15 (3712591 nt) Astart:1792301 Aend:1792280 Bstart:2056357 Bend:2056378 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2345, end:2366) A=258385 nt (start:881, end:860) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.38 -> -1426764 <- tig#29, B=1143067 nt (start:1039824, end:1039803) A=1463708 nt (start:406940, end:406919) CALCULATED DISTANCE APART: -1426764 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.15 -> -865224 <- tig#76, B=3712591 nt (start:837187, end:837166) A=322881 nt (start:48037, end:48016) CALCULATED DISTANCE APART: -865224 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#433 -> -944078 <- tig#r.29, A=1238 nt (start:216, end:237) B=1463708 nt (start:500652, end:500673) CALCULATED DISTANCE APART: -944078 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTATTAGGGATTACGTGAAAG - TTATTTTTGGAGATGGTTACA) on contig 34 (1705564 nt) Astart:679819 Aend:679798 Bstart:664856 Bend:664877 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135148, end:135169) B=15068 nt (start:2528, end:2549) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#25 -> -666259 <- tig#2, B=1290536 nt (start:852837, end:852858) A=5014909 nt (start:248560, end:248539) CALCULATED DISTANCE APART: -666259 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#265 -> -3126344 <- tig#4, A=1946 nt (start:1636, end:1657) B=3837743 nt (start:3146034, end:3146013) CALCULATED DISTANCE APART: -3126344 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#112 -> -7914 <- tig#r.125, A=54810 nt (start:44478, end:44499) B=54013 nt (start:36431, end:36452) CALCULATED DISTANCE APART: -7914 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.143 -> -106916 <- tig#80, B=24293 nt (start:3266, end:3245) A=191116 nt (start:123650, end:123629) CALCULATED DISTANCE APART: -106916 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460604, end:460583) A=1345436 nt (start:25056, end:25035) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GGTTTTATCTGAATTTCAAAC - CACTCTGCAATATCGTTCTCG) on contig 19 (3531543 nt) Astart:3058788 Aend:3058767 Bstart:3049932 Bend:3049911 Pairs unsatisfied in distance within a contig. Pair (ACTCTTCCCGATAAAATCTCG - GGTCACCTGCTTCAGCAGTTG) on contig 46 (577887 nt) Astart:183310 Aend:183331 Bstart:200760 Bend:200739 CALCULATED DISTANCE APART: 17450 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#49 -> -1152645 <- tig#r.43, A=399963 nt (start:351826, end:351847) B=1235946 nt (start:111438, end:111459) CALCULATED DISTANCE APART: -1152645 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AATCAAACATTGAAGAACTAC - GTCTCCTTGTGTAGAACACGT) on contig 4 (3837743 nt) Astart:2357916 Aend:2357937 Bstart:2360146 Bend:2360167 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082412, end:2082433) B=976128 nt (start:961110, end:961131) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CTCATCCAGATGGATTTCACA - GTCTCAGAACAACTTATTGAG) on contig 4 (3837743 nt) Astart:2358411 Aend:2358432 Bstart:2359651 Bend:2359672 Pairs unsatisfied in distance within a contig. Pair (ATAAATTGTAAATCACACGTA - ATGGTTCTTGTCATGAAGTTA) on contig 25 (1290536 nt) Astart:990314 Aend:990293 Bstart:975780 Bend:975801 CALCULATED DISTANCE APART: 14534 Pairs unsatisfied in distance within a contig. Pair (CCCTTCACGTGGATGCTATTA - TAGGGTTTGAATATACCTGGA) on contig 71 (271268 nt) Astart:124264 Aend:124243 Bstart:118896 Bend:118917 CALCULATED DISTANCE APART: 5368 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#46 -> -354208 <- tig#186, B=577887 nt (start:211973, end:211994) A=8794 nt (start:8294, end:8273) CALCULATED DISTANCE APART: -354208 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:1690, end:1711) A=258385 nt (start:226, end:205) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -3661461 <- tig#r.3, A=262460 nt (start:68610, end:68631) B=3889482 nt (start:401871, end:401892) CALCULATED DISTANCE APART: -3661461 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#47 -> -154487 <- tig#32, B=471458 nt (start:328891, end:328912) A=972151 nt (start:31920, end:31899) CALCULATED DISTANCE APART: -154487 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#74 -> -1319199 <- tig#r.38, A=238371 nt (start:1157, end:1178) B=1143067 nt (start:41082, end:41103) CALCULATED DISTANCE APART: -1319199 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCTTACCATATAAAGTATGGT - AAATATCTATTTCTTTATATA) on contig 109 (66564 nt) Astart:5834 Aend:5813 Bstart:198 Bend:219 CALCULATED DISTANCE APART: 5636 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259347, end:2259368) B=356404 nt (start:343877, end:343898) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGTGCTTAGAGCGATCGAGTT - TAGCAGGCAAATGAGACTTCC) on contig 19 (3531543 nt) Astart:3058093 Aend:3058072 Bstart:3050627 Bend:3050606 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:134913, end:134934) B=15068 nt (start:2763, end:2784) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:134208, end:134229) B=15068 nt (start:3468, end:3489) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#120 -> -1341554 <- tig#29, B=44710 nt (start:43942, end:43963) A=1463708 nt (start:1360786, end:1360765) CALCULATED DISTANCE APART: -1341554 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -1443756 <- tig#r.4, A=2650694 nt (start:2066508, end:2066529) B=3837743 nt (start:2958173, end:2958194) CALCULATED DISTANCE APART: -1443756 < -2000 Pairs unsatisfied in distance within a contig. Pair (AATAATCATATGTCACCAAGC - AGTGAGCTCAAAAGTTCATCA) on contig 27 (1227811 nt) Astart:434435 Aend:434456 Bstart:450688 Bend:450667 CALCULATED DISTANCE APART: 16253 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460994, end:460973) A=1345436 nt (start:24666, end:24645) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#305 -> -2202335 <- tig#r.19, A=1638 nt (start:122, end:143) B=3531543 nt (start:1310724, end:1310745) CALCULATED DISTANCE APART: -2202335 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#22 -> -1011575 <- tig#r.1, A=1636463 nt (start:1589600, end:1589621) B=4853111 nt (start:3868399, end:3868420) CALCULATED DISTANCE APART: -1011575 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#10 -> -4005563 <- tig#25, A=3047199 nt (start:123036, end:123057) B=1290536 nt (start:1101400, end:1101379) CALCULATED DISTANCE APART: -4005563 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTTTCTTATAAACAATGAGCA - ATCATCTCTTTATCAATCTAT) on contig 34 (1705564 nt) Astart:679619 Aend:679598 Bstart:664656 Bend:664677 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#77 -> -122338 <- tig#99, B=160344 nt (start:25114, end:25135) A=88102 nt (start:7108, end:7087) CALCULATED DISTANCE APART: -122338 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#86 -> -63824 <- tig#r.167, A=280231 nt (start:211450, end:211471) B=25236 nt (start:10193, end:10214) CALCULATED DISTANCE APART: -63824 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.133 -> -1663588 <- tig#34, B=34073 nt (start:4293, end:4272) A=1705564 nt (start:1679295, end:1679274) CALCULATED DISTANCE APART: -1663588 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#283 -> -3818458 <- tig#2, A=1768 nt (start:408, end:429) B=5014909 nt (start:3837098, end:3837077) CALCULATED DISTANCE APART: -3818458 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#10 -> -2964281 <- tig#103, B=3047199 nt (start:260995, end:261016) A=211876 nt (start:198077, end:198056) CALCULATED DISTANCE APART: -2964281 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGTGATCACTCAAATTATTAA - GCTGGGATGGGCGGTATTGGT) on contig 37 (853709 nt) Astart:538987 Aend:539008 Bstart:551657 Bend:551636 CALCULATED DISTANCE APART: 12670 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#4 -> -5277308 <- tig#6, B=3837743 nt (start:117865, end:117886) A=6870868 nt (start:1577430, end:1577409) CALCULATED DISTANCE APART: -5277308 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTTAAGATTTAACTTTTTTAT - GAAAGAACACTACCAAGGTTA) on contig 109 (66564 nt) Astart:5744 Aend:5723 Bstart:108 Bend:129 CALCULATED DISTANCE APART: 5636 Pairs unsatisfied in pairing logic within a contig. Pair (GAAACCTGGTCAACACGGTTC - TGGAAAACACCACAATTTTGA) on contig 15 (3712591 nt) Astart:1716993 Aend:1717014 Bstart:1731025 Bend:1731046 Pairs unsatisfied in pairing logic within a contig. Pair (GCTTGGTTCTAGGACTAGGTG - GGTTCTTGTTGCACCCACAGT) on contig 48 (487359 nt) Astart:37193 Aend:37214 Bstart:386817 Bend:386838 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728678, end:728699) A=1096 nt (start:763, end:742) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260252, end:2260273) B=356404 nt (start:342972, end:342993) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -40662 <- tig#443, A=736718 nt (start:677071, end:677092) B=1213 nt (start:1015, end:994) CALCULATED DISTANCE APART: -40662 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTTTCTTTTAGTCACTGAACT - GAACAGTGAATGTAAGTAGGT) on contig 2 (5014909 nt) Astart:1268716 Aend:1268737 Bstart:1283378 Bend:1283357 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig. Pair (AGCCGGAGCAGCGCGTTGAGC - ATCAAGTGAGACAATAATCAT) on contig 37 (853709 nt) Astart:839019 Aend:838998 Bstart:823514 Bend:823535 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#120 -> -1341554 <- tig#29, B=44710 nt (start:43407, end:43428) A=1463708 nt (start:1360251, end:1360230) CALCULATED DISTANCE APART: -1341554 < -2000 Pairs unsatisfied in distance within a contig. Pair (GTAGTAGCTTCATATAAAAGT - CCGACTTGCCACTGCCATGAA) on contig 14 (2271162 nt) Astart:1739867 Aend:1739888 Bstart:2002439 Bend:2002418 CALCULATED DISTANCE APART: 262572 Pairs unsatisfied in distance within a contig. Pair (GAAAATGGATGAGAGTAATGA - ATCGCTTTCACGACTGTTAGC) on contig 2 (5014909 nt) Astart:1269836 Aend:1269857 Bstart:1284498 Bend:1284477 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.257 -> -2902765 <- tig#8, B=1995 nt (start:1706, end:1685) A=5070776 nt (start:2921059, end:2921038) CALCULATED DISTANCE APART: -2902765 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.54 -> -316864 <- tig#33, B=625914 nt (start:31225, end:31204) A=1290487 nt (start:305639, end:305618) CALCULATED DISTANCE APART: -316864 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#27 -> -2274981 <- tig#14, A=1227811 nt (start:935504, end:935525) B=2271162 nt (start:2002674, end:2002653) CALCULATED DISTANCE APART: -2274981 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3582 <- tig#26, B=1171658 nt (start:1170954, end:1170975) A=1332708 nt (start:22878, end:22857) CALCULATED DISTANCE APART: -3582 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#265 -> -3126344 <- tig#4, A=1946 nt (start:1756, end:1777) B=3837743 nt (start:3146154, end:3146133) CALCULATED DISTANCE APART: -3126344 < -2000 Pairs unsatisfied in distance within a contig. Pair (AACAGACTATGATGCCAGATA - TTAGCATATAACATGTCAAAA) on contig 41 (667251 nt) Astart:88313 Aend:88292 Bstart:75633 Bend:75654 CALCULATED DISTANCE APART: 12680 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#283 -> -3818458 <- tig#2, A=1768 nt (start:488, end:509) B=5014909 nt (start:3837178, end:3837157) CALCULATED DISTANCE APART: -3818458 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185894, end:4185873) A=3712591 nt (start:667, end:646) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig. Pair (CCTTTCCTACAATTAAAAATT - CACACCTTTTAATTACAGAAA) on contig 34 (1705564 nt) Astart:679469 Aend:679448 Bstart:664506 Bend:664527 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.48 -> -3108447 <- tig#12, B=487359 nt (start:404723, end:404702) A=2766197 nt (start:2723724, end:2723703) CALCULATED DISTANCE APART: -3108447 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#8 -> -4732515 <- tig#4, B=5070776 nt (start:760898, end:760919) A=3837743 nt (start:442637, end:442616) CALCULATED DISTANCE APART: -4732515 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.1 -> -4590186 <- tig#16, B=4853111 nt (start:3207932, end:3207911) A=2098954 nt (start:1402254, end:1402233) CALCULATED DISTANCE APART: -4590186 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135718, end:135739) B=15068 nt (start:1958, end:1979) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.31 -> -71289 <- tig#98, B=976128 nt (start:16810, end:16789) A=88184 nt (start:74479, end:74458) CALCULATED DISTANCE APART: -71289 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#77 -> -122338 <- tig#99, B=160344 nt (start:25199, end:25220) A=88102 nt (start:7193, end:7172) CALCULATED DISTANCE APART: -122338 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136153, end:136174) B=15068 nt (start:1523, end:1544) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.48 -> -352632 <- tig#387, B=487359 nt (start:372125, end:372104) A=1354 nt (start:507, end:486) CALCULATED DISTANCE APART: -352632 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#43 -> -1009149 <- tig#73, B=1235946 nt (start:225811, end:225832) A=171056 nt (start:19014, end:18993) CALCULATED DISTANCE APART: -1009149 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGCTCGTGGCTCTTCTTCTCT - AGAGCTTTGTTTCTTCTTATG) on contig 15 (3712591 nt) Astart:1718458 Aend:1718479 Bstart:1729560 Bend:1729581 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16735, end:16714) A=1227811 nt (start:7080, end:7059) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#33 -> -492044 <- tig#32, A=1290487 nt (start:1236002, end:1236023) B=972151 nt (start:457559, end:457538) CALCULATED DISTANCE APART: -492044 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#53 -> -24523 <- tig#2, B=354284 nt (start:340904, end:340925) A=5014909 nt (start:31143, end:31122) CALCULATED DISTANCE APART: -24523 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#120 -> -1341554 <- tig#29, B=44710 nt (start:43142, end:43163) A=1463708 nt (start:1359986, end:1359965) CALCULATED DISTANCE APART: -1341554 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#9 -> -3469176 <- tig#58, A=3747885 nt (start:435728, end:435749) B=374416 nt (start:177019, end:176998) CALCULATED DISTANCE APART: -3469176 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#56 -> -1319014 <- tig#29, B=262460 nt (start:154755, end:154776) A=1463708 nt (start:1231309, end:1231288) CALCULATED DISTANCE APART: -1319014 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.1 -> -4590186 <- tig#16, B=4853111 nt (start:3208077, end:3208056) A=2098954 nt (start:1402109, end:1402088) CALCULATED DISTANCE APART: -4590186 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260997, end:2261018) B=356404 nt (start:342227, end:342248) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12436, end:12415) A=91302 nt (start:11757, end:11736) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#11 -> -4381731 <- tig#79, A=4628067 nt (start:266817, end:266838) B=136600 nt (start:40481, end:40460) CALCULATED DISTANCE APART: -4381731 < -2000 Pairs unsatisfied in distance within a contig. Pair (GACCAAACGCGTTGATTAAGA - CTTCTTCTCCATTTTTTTAGA) on contig 34 (1705564 nt) Astart:679944 Aend:679923 Bstart:664981 Bend:665002 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#51 -> -623213 <- tig#r.54, A=875428 nt (start:750795, end:750816) B=625914 nt (start:107334, end:107355) CALCULATED DISTANCE APART: -623213 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AAATGGTTTGAGTGACAAGTC - TCTCATTCTCCTCGTAGTACT) on contig 19 (3531543 nt) Astart:3060226 Aend:3060205 Bstart:3048497 Bend:3048476 Pairs unsatisfied in pairing logic within a contig. Pair (TTTTTATACGGCCATGCATCA - GTATCGCCGAGTCCATAGCCC) on contig 19 (3531543 nt) Astart:3059516 Aend:3059495 Bstart:3049207 Bend:3049186 Pairs unsatisfied in distance within a contig. Pair (ACAAGTGGAGGAGAAAGGGTT - ATAAAAATCTAACACATAGAT) on contig 5 (3689108 nt) Astart:1178302 Aend:1178281 Bstart:1163168 Bend:1163189 CALCULATED DISTANCE APART: 15134 Pairs unsatisfied in distance within a contig. Pair (GTGAGCTCTTCTTCTTCTTGT - ATTAATAGGTATGATTGGTAA) on contig 5 (3689108 nt) Astart:1170042 Aend:1170063 Bstart:1185177 Bend:1185156 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#63 -> -1836763 <- tig#5, A=274372 nt (start:184511, end:184532) B=3689108 nt (start:1766902, end:1766881) CALCULATED DISTANCE APART: -1836763 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCTTCAAACTCTTCCCTCTTG - GAAGAAGGTGTAACTTAAAAG) on contig 15 (3712591 nt) Astart:3352287 Aend:3352308 Bstart:3377273 Bend:3377252 CALCULATED DISTANCE APART: 24986 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#48 -> -585503 <- tig#46, A=487359 nt (start:41274, end:41295) B=577887 nt (start:159418, end:159397) CALCULATED DISTANCE APART: -585503 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#7 -> -3853079 <- tig#36, A=3534247 nt (start:146029, end:146050) B=855454 nt (start:484861, end:484840) CALCULATED DISTANCE APART: -3853079 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#34 -> -1107957 <- tig#79, A=1705564 nt (start:661616, end:661637) B=136600 nt (start:84009, end:83988) CALCULATED DISTANCE APART: -1107957 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.257 -> -2902765 <- tig#8, B=1995 nt (start:1141, end:1120) A=5070776 nt (start:2921624, end:2921603) CALCULATED DISTANCE APART: -2902765 < -2000 Pairs unsatisfied in distance within a contig. Pair (TATCAGAGAATCATAAAGAAG - GAACCACTCACACCGCTAGGG) on contig 14 (2271162 nt) Astart:1978669 Aend:1978690 Bstart:2002839 Bend:2002818 CALCULATED DISTANCE APART: 24170 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16860, end:16839) A=1227811 nt (start:6955, end:6934) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTTGGGAAGCGTGTCCTGCTG - ATGTATGATGTAGAGAGTTGC) on contig 15 (3712591 nt) Astart:3350140 Aend:3350161 Bstart:3375128 Bend:3375107 CALCULATED DISTANCE APART: 24988 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135723, end:135744) B=15068 nt (start:1953, end:1974) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#26 -> -90650 <- tig#95, B=1332708 nt (start:1310483, end:1310504) A=92653 nt (start:88425, end:88404) CALCULATED DISTANCE APART: -90650 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#11 -> -2359899 <- tig#r.51, A=4628067 nt (start:2598433, end:2598454) B=875428 nt (start:525163, end:525184) CALCULATED DISTANCE APART: -2359899 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#590 -> -1631326 <- tig#r.34, A=1018 nt (start:357, end:378) B=1705564 nt (start:54899, end:54920) CALCULATED DISTANCE APART: -1631326 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#125 -> -41626 <- tig#122, A=54013 nt (start:8974, end:8995) B=43035 nt (start:16587, end:16566) CALCULATED DISTANCE APART: -41626 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17025, end:17004) A=1227811 nt (start:6790, end:6769) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig. Pair (GATGAATAGAGTTTGATTCAA - CACAGAAACATCTGAATGAAA) on contig 6 (6870868 nt) Astart:1137859 Aend:1137838 Bstart:1129432 Bend:1129453 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.77 -> -3516613 <- tig#7, B=160344 nt (start:13511, end:13490) A=3534247 nt (start:3523102, end:3523081) CALCULATED DISTANCE APART: -3516613 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#48 -> -3151847 <- tig#12, B=487359 nt (start:40426, end:40447) A=2766197 nt (start:2724914, end:2724893) CALCULATED DISTANCE APART: -3151847 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.38 -> -1310006 <- tig#33, B=1143067 nt (start:1039224, end:1039203) A=1290487 nt (start:290782, end:290761) CALCULATED DISTANCE APART: -1310006 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#43 -> -461668 <- tig#53, B=1235946 nt (start:923919, end:923940) A=354284 nt (start:169641, end:169620) CALCULATED DISTANCE APART: -461668 < -2000 Pairs unsatisfied in distance within a contig. Pair (ACTTCTTCTTCTTCGTGTACG - GGCCTTGCAGGATTTTATAGG) on contig 30 (1050452 nt) Astart:650749 Aend:650770 Bstart:666515 Bend:666494 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in distance within a contig. Pair (CAAAACTTGTGTGTTTGCTGC - AAATAAAATTATCTTCTTAAG) on contig 5 (3689108 nt) Astart:1170082 Aend:1170103 Bstart:1185217 Bend:1185196 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig. Pair (TATTAAACTCTAACACTTAAA - ATCAGAGAGTTTAACCGCAGC) on contig 15 (3712591 nt) Astart:2103536 Aend:2103515 Bstart:2053612 Bend:2053633 CALCULATED DISTANCE APART: 49924 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#19 -> -3620483 <- tig#r.54, A=3531543 nt (start:470696, end:470717) B=625914 nt (start:46278, end:46299) CALCULATED DISTANCE APART: -3620483 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#283 -> -3818458 <- tig#2, A=1768 nt (start:478, end:499) B=5014909 nt (start:3837168, end:3837147) CALCULATED DISTANCE APART: -3818458 < -2000 Pairs unsatisfied in distance within a contig. Pair (CAATAAACAAGATCAGCATCA - GCTTGACGACTTGAGGCAAGT) on contig 6 (6870868 nt) Astart:1138604 Aend:1138583 Bstart:1130149 Bend:1130170 CALCULATED DISTANCE APART: 8455 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.58 -> -1866109 <- tig#19, B=374416 nt (start:14346, end:14325) A=3531543 nt (start:1871763, end:1871742) CALCULATED DISTANCE APART: -1866109 < -2000 Pairs unsatisfied in distance within a contig. Pair (GATGCTGATCTCTTCAAACTC - TAACTTAAAAGTTGAAGACTA) on contig 15 (3712591 nt) Astart:3352277 Aend:3352298 Bstart:3377263 Bend:3377242 CALCULATED DISTANCE APART: 24986 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082847, end:2082868) B=976128 nt (start:960675, end:960696) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTTCACTATGAAATTGAGTTT - ATTGTACGCTTGCCCTGCCTA) on contig 41 (667251 nt) Astart:88608 Aend:88587 Bstart:75928 Bend:75949 CALCULATED DISTANCE APART: 12680 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3583 <- tig#26, B=1171658 nt (start:1171003, end:1171024) A=1332708 nt (start:22928, end:22907) CALCULATED DISTANCE APART: -3583 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460839, end:460818) A=1345436 nt (start:24821, end:24800) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.91 -> -51057 <- tig#31, B=101959 nt (start:15575, end:15554) A=976128 nt (start:55482, end:55461) CALCULATED DISTANCE APART: -51057 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135083, end:135104) B=15068 nt (start:2593, end:2614) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136038, end:136059) B=15068 nt (start:1638, end:1659) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16785, end:16764) A=1227811 nt (start:7030, end:7009) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.521 -> -111709 <- tig#63, B=1100 nt (start:672, end:651) A=274372 nt (start:131037, end:131016) CALCULATED DISTANCE APART: -111709 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:134748, end:134769) B=15068 nt (start:2928, end:2949) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16385, end:16364) A=1227811 nt (start:7430, end:7409) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGTTGTGTCGGTGACTTTTAT - ATTGCTCTCCAAAGAAAAAAA) on contig 19 (3531543 nt) Astart:3059921 Aend:3059900 Bstart:3048802 Bend:3048781 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -1335675 <- tig#4, B=3747885 nt (start:2858827, end:2858848) A=3837743 nt (start:466617, end:466596) CALCULATED DISTANCE APART: -1335675 < -2000 Pairs unsatisfied in distance within a contig. Pair (TACAAAATGACTTTGGCTTCT - AGCAGCAGCTTACTGCATTCC) on contig 6 (6870868 nt) Astart:1138654 Aend:1138633 Bstart:1130199 Bend:1130220 CALCULATED DISTANCE APART: 8455 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -322558 <- tig#r.572, A=2650694 nt (start:2308925, end:2308946) B=1031 nt (start:242, end:263) CALCULATED DISTANCE APART: -322558 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135228, end:135249) B=15068 nt (start:2448, end:2469) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#103 -> -852675 <- tig#r.40, A=211876 nt (start:6533, end:6554) B=668174 nt (start:842, end:863) CALCULATED DISTANCE APART: -852675 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2280, end:2301) A=258385 nt (start:816, end:795) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219036, end:4219015) A=2598 nt (start:2585, end:2564) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#53 -> -24524 <- tig#2, B=354284 nt (start:341114, end:341135) A=5014909 nt (start:31354, end:31333) CALCULATED DISTANCE APART: -24524 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#1 -> -4220727 <- tig#r.10, A=4853111 nt (start:1841109, end:1841130) B=3047199 nt (start:1818474, end:1818495) CALCULATED DISTANCE APART: -4220727 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGGGTCCTCGATAACGATGAG - ATTGGCGGGATGTTTAACCAC) on contig 30 (1050452 nt) Astart:648744 Aend:648765 Bstart:673778 Bend:673757 CALCULATED DISTANCE APART: 25034 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#120 -> -1341554 <- tig#29, B=44710 nt (start:43147, end:43168) A=1463708 nt (start:1359991, end:1359970) CALCULATED DISTANCE APART: -1341554 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10408, end:10387) A=2766197 nt (start:2151155, end:2151134) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#33 -> -492044 <- tig#32, A=1290487 nt (start:1235817, end:1235838) B=972151 nt (start:457374, end:457353) CALCULATED DISTANCE APART: -492044 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135143, end:135164) B=15068 nt (start:2533, end:2554) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17535, end:17514) A=1227811 nt (start:6280, end:6259) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16570, end:16549) A=1227811 nt (start:7245, end:7224) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGCCTTTTTGGTGCTTTTGTT - GATAAAGATTTGTGAGGACTT) on contig 33 (1290487 nt) Astart:109132 Aend:109153 Bstart:244469 Bend:244490 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#146 -> -25215 <- tig#r.139, A=21489 nt (start:2841, end:2862) B=27696 nt (start:1129, end:1150) CALCULATED DISTANCE APART: -25215 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#161 -> -340044 <- tig#r.49, A=15506 nt (start:12112, end:12133) B=399963 nt (start:43313, end:43334) CALCULATED DISTANCE APART: -340044 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#47 -> -347205 <- tig#53, B=471458 nt (start:285516, end:285537) A=354284 nt (start:181263, end:181242) CALCULATED DISTANCE APART: -347205 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGGTATTTTCTTAAACTAAAA - AGTCACCTAATAACTTTATTG) on contig 37 (853709 nt) Astart:838384 Aend:838363 Bstart:822879 Bend:822900 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#48 -> -3151835 <- tig#12, B=487359 nt (start:39168, end:39189) A=2766197 nt (start:2723644, end:2723623) CALCULATED DISTANCE APART: -3151835 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AATGTCAAAGCCGAAAACATG - AAATTATTAAAAACAGCCCAA) on contig 53 (354284 nt) Astart:242991 Aend:242970 Bstart:340119 Bend:340140 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459534, end:459513) A=1345436 nt (start:26126, end:26105) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.257 -> -2902765 <- tig#8, B=1995 nt (start:1076, end:1055) A=5070776 nt (start:2921689, end:2921668) CALCULATED DISTANCE APART: -2902765 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260187, end:2260208) B=356404 nt (start:343037, end:343058) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig. Pair (CAATACACTTCAATAATCTCC - TTTTATTTTATAAAGTACTAT) on contig 34 (1705564 nt) Astart:679989 Aend:679968 Bstart:665026 Bend:665047 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in pairing logic within a contig. Pair (GGCCACAGGACTCATTTGACT - TTTGATTTGAGACTATTCACA) on contig 19 (3531543 nt) Astart:3058958 Aend:3058937 Bstart:3049762 Bend:3049741 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12891, end:12870) A=91302 nt (start:11302, end:11281) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.54 -> -4782296 <- tig#6, B=625914 nt (start:36157, end:36136) A=6870868 nt (start:4766139, end:4766118) CALCULATED DISTANCE APART: -4782296 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135223, end:135244) B=15068 nt (start:2453, end:2474) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig. Pair (CCAAGAACATGCTCCTGATGC - TTTATGGTTTAACAAACTATA) on contig 5 (3689108 nt) Astart:1178467 Aend:1178446 Bstart:1163333 Bend:1163354 CALCULATED DISTANCE APART: 15134 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.403 -> -2330792 <- tig#13, B=1321 nt (start:480, end:459) A=2650694 nt (start:2350312, end:2350291) CALCULATED DISTANCE APART: -2330792 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GGTTAACTCAGGGCGGGTTAA - AGTATTAATTAAATATTTAAA) on contig 14 (2271162 nt) Astart:658346 Aend:658325 Bstart:495565 Bend:495544 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.409 -> -1019852 <- tig#23, B=1303 nt (start:681, end:660) A=1345436 nt (start:1039171, end:1039150) CALCULATED DISTANCE APART: -1019852 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#56 -> -1319384 <- tig#29, B=262460 nt (start:154770, end:154791) A=1463708 nt (start:1231694, end:1231673) CALCULATED DISTANCE APART: -1319384 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#22 -> -6369340 <- tig#6, B=1636463 nt (start:14857, end:14878) A=6870868 nt (start:4767734, end:4767713) CALCULATED DISTANCE APART: -6369340 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTGGAAGTTGTGTCGGTGACT - TCTCCAAAGAAAAAAATCAAA) on contig 19 (3531543 nt) Astart:3059926 Aend:3059905 Bstart:3048797 Bend:3048776 Pairs unsatisfied in distance within a contig. Pair (CAAAGTATCAGAGAATCATAA - ACTCACACCGCTAGGGTTGTT) on contig 14 (2271162 nt) Astart:1978664 Aend:1978685 Bstart:2002834 Bend:2002813 CALCULATED DISTANCE APART: 24170 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#54 -> -287038 <- tig#r.121, A=625914 nt (start:324602, end:324623) B=43689 nt (start:37963, end:37984) CALCULATED DISTANCE APART: -287038 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -621133 <- tig#r.66, A=2766197 nt (start:2129653, end:2129674) B=201913 nt (start:197324, end:197345) CALCULATED DISTANCE APART: -621133 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#57 -> -3231864 <- tig#7, A=258385 nt (start:255999, end:256020) B=3534247 nt (start:3249478, end:3249457) CALCULATED DISTANCE APART: -3231864 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#56 -> -4379220 <- tig#8, B=262460 nt (start:205885, end:205906) A=5070776 nt (start:4342645, end:4342624) CALCULATED DISTANCE APART: -4379220 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATGCCCCAAACACTATGAACA - ATTTATTCACGTTAATATATG) on contig 19 (3531543 nt) Astart:3058983 Aend:3058962 Bstart:3049737 Bend:3049716 Pairs unsatisfied in distance within a contig. Pair (GCGGCATAATGGGAGGCGGTG - TTTTGGGTTTGGATCACTCTT) on contig 5 (3689108 nt) Astart:1169737 Aend:1169758 Bstart:1184872 Bend:1184851 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#34 -> -1056103 <- tig#r.65, A=1705564 nt (start:662496, end:662517) B=286124 nt (start:253089, end:253110) CALCULATED DISTANCE APART: -1056103 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTCTCTTATAAAAATAGAAAA - GGAAGTCCAAGCCAGAGTGGG) on contig 109 (66564 nt) Astart:5724 Aend:5703 Bstart:88 Bend:109 CALCULATED DISTANCE APART: 5636 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -322558 <- tig#r.572, A=2650694 nt (start:2308760, end:2308781) B=1031 nt (start:407, end:428) CALCULATED DISTANCE APART: -322558 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ACAAATCGAAAAAGAAGGAAC - GGTAATTAGGAACATGATTTG) on contig 14 (2271162 nt) Astart:658371 Aend:658350 Bstart:495540 Bend:495519 Pairs unsatisfied in pairing logic within a contig. Pair (CACTTGTTCACTCGGAGCTCG - CTTATGGGCACTTGCGGCGTC) on contig 15 (3712591 nt) Astart:1718443 Aend:1718464 Bstart:1729575 Bend:1729596 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#32 -> -2114916 <- tig#34, B=972151 nt (start:526489, end:526510) A=1705564 nt (start:1689254, end:1689233) CALCULATED DISTANCE APART: -2114916 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CTTTTTTTTCTTCGTAGCTCT - ATGGAGTGTCAATCACGAATC) on contig 19 (3531543 nt) Astart:3059611 Aend:3059590 Bstart:3049112 Bend:3049091 Pairs unsatisfied in pairing logic within a contig. Pair (TCGAAAAAGAAGGAACCTAGG - AACATGGTAATTAGGAACATG) on contig 14 (2271162 nt) Astart:658366 Aend:658345 Bstart:495545 Bend:495524 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#51 -> -548590 <- tig#79, B=875428 nt (start:390951, end:390972) A=136600 nt (start:84113, end:84092) CALCULATED DISTANCE APART: -548590 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#19 -> -3620483 <- tig#r.54, A=3531543 nt (start:470691, end:470712) B=625914 nt (start:46283, end:46304) CALCULATED DISTANCE APART: -3620483 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#64 -> -195944 <- tig#109, B=211265 nt (start:810, end:831) A=66564 nt (start:5489, end:5468) CALCULATED DISTANCE APART: -195944 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTCGAGGATAAACTTGAGAAG - GCGGTTTCCAATAATTTATAG) on contig 2 (5014909 nt) Astart:1270141 Aend:1270162 Bstart:1284803 Bend:1284782 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig. Pair (CCTTTTTTTCTGGTAGATTCT - ATTTGTACCAAGATACTATCT) on contig 5 (3689108 nt) Astart:1169362 Aend:1169383 Bstart:1184497 Bend:1184476 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in pairing logic within a contig. Pair (AACATTGAAGAACTACTGTAA - CTATAGTCTCCTTGTGTAGAA) on contig 4 (3837743 nt) Astart:2357921 Aend:2357942 Bstart:2360141 Bend:2360162 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#20 -> -3462104 <- tig#7, A=2328057 nt (start:1395099, end:1395120) B=3534247 nt (start:2549146, end:2549125) CALCULATED DISTANCE APART: -3462104 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#25 -> -666259 <- tig#2, B=1290536 nt (start:852727, end:852748) A=5014909 nt (start:248450, end:248429) CALCULATED DISTANCE APART: -666259 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135648, end:135669) B=15068 nt (start:2028, end:2049) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#46 -> -3144173 <- tig#12, B=577887 nt (start:138568, end:138589) A=2766197 nt (start:2724854, end:2724833) CALCULATED DISTANCE APART: -3144173 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CGTCGTGCAGCTCCATTTGCA - AAATTAAGAAACAAAAATAGA) on contig 15 (3712591 nt) Astart:1716863 Aend:1716884 Bstart:1731155 Bend:1731176 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#4 -> -2752665 <- tig#9, B=3837743 nt (start:2984534, end:2984555) A=3747885 nt (start:1919456, end:1919435) CALCULATED DISTANCE APART: -2752665 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TCTCCATCGCCAATCTCCGAT - TAAGGCAATGTTTTCTTAATT) on contig 15 (3712591 nt) Astart:1792321 Aend:1792300 Bstart:2056377 Bend:2056398 Pairs unsatisfied in distance within a contig. Pair (TGATAAGCTGAAGGAGAGGTT - CTGAGTTCCATTCTCCTCCAC) on contig 1 (4853111 nt) Astart:346955 Aend:346976 Bstart:392232 Bend:392211 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4186034, end:4186013) A=3712591 nt (start:527, end:506) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GACACAGAAACATAAACCGCA - GTTATGACCCACTCTTCGTCT) on contig 15 (3712591 nt) Astart:1716678 Aend:1716699 Bstart:1731340 Bend:1731361 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#120 -> -1341554 <- tig#29, B=44710 nt (start:44272, end:44293) A=1463708 nt (start:1361116, end:1361095) CALCULATED DISTANCE APART: -1341554 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#38 -> -1110027 <- tig#78, B=1143067 nt (start:142951, end:142972) A=184063 nt (start:129911, end:129890) CALCULATED DISTANCE APART: -1110027 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260027, end:2260048) B=356404 nt (start:343197, end:343218) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#42 -> -508153 <- tig#r.37, A=659641 nt (start:566429, end:566450) B=853709 nt (start:418768, end:418789) CALCULATED DISTANCE APART: -508153 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATTTACCGGCGGCGGATGCTT - ATAATCTTATTACAAATTGAA) on contig 15 (3712591 nt) Astart:1718688 Aend:1718709 Bstart:1729330 Bend:1729351 Pairs unsatisfied in distance within a contig. Pair (CTCTAAATCATGATGAGTACT - AGTTCTTTGTTGTTTCTCTTT) on contig 6 (6870868 nt) Astart:1138919 Aend:1138898 Bstart:1130436 Bend:1130457 CALCULATED DISTANCE APART: 8483 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#174 -> -148970 <- tig#80, B=11297 nt (start:5866, end:5887) A=191116 nt (start:163539, end:163518) CALCULATED DISTANCE APART: -148970 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -1335675 <- tig#4, B=3747885 nt (start:2858757, end:2858778) A=3837743 nt (start:466547, end:466526) CALCULATED DISTANCE APART: -1335675 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.42 -> -1433157 <- tig#20, B=659641 nt (start:2343, end:2322) A=2328057 nt (start:1450814, end:1450793) CALCULATED DISTANCE APART: -1433157 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#120 -> -1341554 <- tig#29, B=44710 nt (start:44122, end:44143) A=1463708 nt (start:1360966, end:1360945) CALCULATED DISTANCE APART: -1341554 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12356, end:12335) A=91302 nt (start:11837, end:11816) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:458979, end:458958) A=1345436 nt (start:26681, end:26660) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728538, end:728559) A=1096 nt (start:623, end:602) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#31 -> -921133 <- tig#r.134, A=976128 nt (start:42424, end:42445) B=33262 nt (start:25833, end:25854) CALCULATED DISTANCE APART: -921133 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#7 -> -189845 <- tig#65, B=3534247 nt (start:3525277, end:3525298) A=286124 nt (start:200875, end:200854) CALCULATED DISTANCE APART: -189845 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TCTATCGGGTTCGAGGAATGG - CCTGGTCGACAAATCCTCGAC) on contig 95 (92653 nt) Astart:92475 Aend:92454 Bstart:92558 Bend:92579 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#305 -> -2202335 <- tig#r.19, A=1638 nt (start:217, end:238) B=3531543 nt (start:1310629, end:1310650) CALCULATED DISTANCE APART: -2202335 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#265 -> -3126344 <- tig#4, A=1946 nt (start:1791, end:1812) B=3837743 nt (start:3146189, end:3146168) CALCULATED DISTANCE APART: -3126344 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460119, end:460098) A=1345436 nt (start:25541, end:25520) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#34 -> -1107961 <- tig#79, A=1705564 nt (start:661456, end:661477) B=136600 nt (start:83853, end:83832) CALCULATED DISTANCE APART: -1107961 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#103 -> -188044 <- tig#521, A=211876 nt (start:4829, end:4850) B=1100 nt (start:997, end:976) CALCULATED DISTANCE APART: -188044 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#33 -> -492044 <- tig#32, A=1290487 nt (start:1235767, end:1235788) B=972151 nt (start:457324, end:457303) CALCULATED DISTANCE APART: -492044 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#39 -> -357448 <- tig#r.48, A=736718 nt (start:459287, end:459308) B=487359 nt (start:387342, end:387363) CALCULATED DISTANCE APART: -357448 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTAAAGTTTCGGACAATAGAG - TTCGGATAGAGATACTAAGTT) on contig 30 (1050452 nt) Astart:649624 Aend:649645 Bstart:665390 Bend:665369 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.257 -> -2902765 <- tig#8, B=1995 nt (start:1186, end:1165) A=5070776 nt (start:2921579, end:2921558) CALCULATED DISTANCE APART: -2902765 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#34 -> -1056103 <- tig#r.65, A=1705564 nt (start:662481, end:662502) B=286124 nt (start:253104, end:253125) CALCULATED DISTANCE APART: -1056103 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#148 -> -1869235 <- tig#15, A=35830 nt (start:34009, end:34030) B=3712591 nt (start:1887414, end:1887393) CALCULATED DISTANCE APART: -1869235 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#12 -> -580120 <- tig#11, B=2766197 nt (start:2453474, end:2453495) A=4628067 nt (start:287397, end:287376) CALCULATED DISTANCE APART: -580120 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219261, end:4219240) A=2598 nt (start:2360, end:2339) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.47 -> -199642 <- tig#2, B=471458 nt (start:121971, end:121950) A=5014909 nt (start:97671, end:97650) CALCULATED DISTANCE APART: -199642 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CCTCCGATAAGGAAACAACAA - AGATAGCCAAAACAAGAAAAA) on contig 19 (3531543 nt) Astart:3058903 Aend:3058882 Bstart:3049817 Bend:3049796 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136193, end:136214) B=15068 nt (start:1483, end:1504) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2350, end:2371) A=258385 nt (start:886, end:865) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGAAGATTTCCTTTTTCTGTA - AAATGCGCTCAGACCAGTGTT) on contig 43 (1235946 nt) Astart:243856 Aend:243835 Bstart:226446 Bend:226467 CALCULATED DISTANCE APART: 17410 Pairs unsatisfied in distance within a contig. Pair (AGTGTACAATTTTAGGATTTA - AGAATGTCTCGTTTACGTGAT) on contig 109 (66564 nt) Astart:7514 Aend:7493 Bstart:1649 Bend:1670 CALCULATED DISTANCE APART: 5865 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#146 -> -3213 <- tig#109, B=21489 nt (start:5555, end:5576) A=66564 nt (start:7279, end:7258) CALCULATED DISTANCE APART: -3213 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728033, end:728054) A=1096 nt (start:118, end:97) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728868, end:728889) A=1096 nt (start:953, end:932) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10248, end:10227) A=2766197 nt (start:2151315, end:2151294) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig. Pair (GGAAAATGCTAAGCGCATCTG - TTAATTGGAAATTTTGTCTTT) on contig 6 (6870868 nt) Astart:1138259 Aend:1138238 Bstart:1129832 Bend:1129853 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#48 -> -3151848 <- tig#12, B=487359 nt (start:39810, end:39831) A=2766197 nt (start:2724299, end:2724278) CALCULATED DISTANCE APART: -3151848 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#414 -> -168815 <- tig#48, B=1291 nt (start:751, end:772) A=487359 nt (start:188275, end:188254) CALCULATED DISTANCE APART: -168815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#57 -> -4506482 <- tig#r.11, A=258385 nt (start:255996, end:256017) B=4628067 nt (start:103974, end:103995) CALCULATED DISTANCE APART: -4506482 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#22 -> -6369409 <- tig#6, B=1636463 nt (start:14218, end:14239) A=6870868 nt (start:4767164, end:4767143) CALCULATED DISTANCE APART: -6369409 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#34 -> -3900848 <- tig#r.11, A=1705564 nt (start:54532, end:54553) B=4628067 nt (start:2358251, end:2358272) CALCULATED DISTANCE APART: -3900848 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#120 -> -1341554 <- tig#29, B=44710 nt (start:43307, end:43328) A=1463708 nt (start:1360151, end:1360130) CALCULATED DISTANCE APART: -1341554 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#265 -> -3126344 <- tig#4, A=1946 nt (start:1921, end:1942) B=3837743 nt (start:3146319, end:3146298) CALCULATED DISTANCE APART: -3126344 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33349, end:33328) A=855454 nt (start:19100, end:19079) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136103, end:136124) B=15068 nt (start:1573, end:1594) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig. Pair (GATTATCGATTTGGTAAAACT - TATACACACTGATGCTTTGAA) on contig 2 (5014909 nt) Astart:1268861 Aend:1268882 Bstart:1283523 Bend:1283502 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259932, end:2259953) B=356404 nt (start:343292, end:343313) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#64 -> -210549 <- tig#109, B=211265 nt (start:792, end:813) A=66564 nt (start:20076, end:20055) CALCULATED DISTANCE APART: -210549 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -322558 <- tig#r.572, A=2650694 nt (start:2308950, end:2308971) B=1031 nt (start:217, end:238) CALCULATED DISTANCE APART: -322558 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219346, end:4219325) A=2598 nt (start:2275, end:2254) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -1263676 <- tig#29, A=736718 nt (start:407316, end:407337) B=1463708 nt (start:954274, end:954253) CALCULATED DISTANCE APART: -1263676 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTCCATATTGTTGTCCTGAAG - TGAAATCCCGAAGAGTACGAC) on contig 41 (667251 nt) Astart:88338 Aend:88317 Bstart:75658 Bend:75679 CALCULATED DISTANCE APART: 12680 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.12 -> -2600836 <- tig#387, B=2766197 nt (start:2620524, end:2620503) A=1354 nt (start:312, end:291) CALCULATED DISTANCE APART: -2600836 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TCTTTCATTGTGTTGCCTACC - CACCAACCCATGAATACACCA) on contig 4 (3837743 nt) Astart:2357851 Aend:2357872 Bstart:2360211 Bend:2360232 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282262, end:282283) B=2196 nt (start:443, end:422) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ACCAGTCATCATAAACTCATC - ATTGAGACAAACTTTGAAAGA) on contig 4 (3837743 nt) Astart:2358396 Aend:2358417 Bstart:2359666 Bend:2359687 Pairs unsatisfied in distance within a contig. Pair (TTTGATGAGTCATCATCACCA - TGGCAGCTCACATGTTGAAAT) on contig 37 (853709 nt) Astart:537777 Aend:537798 Bstart:550447 Bend:550426 CALCULATED DISTANCE APART: 12670 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#3 -> -3618470 <- tig#27, B=3889482 nt (start:316539, end:316560) A=1227811 nt (start:65527, end:65506) CALCULATED DISTANCE APART: -3618470 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#103 -> -216461 <- tig#48, A=211876 nt (start:14529, end:14550) B=487359 nt (start:39114, end:39093) CALCULATED DISTANCE APART: -216461 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#46 -> -3500665 <- tig#6, B=577887 nt (start:567145, end:567166) A=6870868 nt (start:3509923, end:3509902) CALCULATED DISTANCE APART: -3500665 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#6 -> -287005 <- tig#95, B=6870868 nt (start:6656265, end:6656286) A=92653 nt (start:92402, end:92381) CALCULATED DISTANCE APART: -287005 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GATAATCATCAACCTGCATCA - TCATGATTATTTATGTTCTCG) on contig 15 (3712591 nt) Astart:1718973 Aend:1718994 Bstart:1729045 Bend:1729066 Pairs unsatisfied in pairing logic within a contig. Pair (AATATATGTTCTTTTTTTTCT - AATCACGAATCCGAAACCGGA) on contig 19 (3531543 nt) Astart:3059621 Aend:3059600 Bstart:3049102 Bend:3049081 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -4201 <- tig#r.96, A=262460 nt (start:244516, end:244537) B=91302 nt (start:85045, end:85066) CALCULATED DISTANCE APART: -4201 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#56 -> -1319384 <- tig#29, B=262460 nt (start:154765, end:154786) A=1463708 nt (start:1231689, end:1231668) CALCULATED DISTANCE APART: -1319384 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#36 -> -228778 <- tig#r.41, A=855454 nt (start:790435, end:790456) B=667251 nt (start:483492, end:483513) CALCULATED DISTANCE APART: -228778 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#77 -> -122338 <- tig#99, B=160344 nt (start:25109, end:25130) A=88102 nt (start:7103, end:7082) CALCULATED DISTANCE APART: -122338 < -2000 Pairs unsatisfied in distance within a contig. Pair (AATTTTTCTTTAAAATATCAA - ATGAGTACCATCAATGATCTG) on contig 2 (5014909 nt) Astart:1269761 Aend:1269782 Bstart:1284423 Bend:1284402 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig. Pair (ATAAGGTAAACGCATAACCCA - CATGATTGGTTTGATTAAAAT) on contig 37 (853709 nt) Astart:537922 Aend:537943 Bstart:550581 Bend:550560 CALCULATED DISTANCE APART: 12659 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#22 -> -1615678 <- tig#20, B=1636463 nt (start:11001, end:11022) A=2328057 nt (start:10216, end:10195) CALCULATED DISTANCE APART: -1615678 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:729882, end:729903) B=3531543 nt (start:3199456, end:3199435) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGAGAACAGAGAGGCAAACGA - CGGTTATGAAATTTTACCAAG) on contig 15 (3712591 nt) Astart:1791905 Aend:1791884 Bstart:2055977 Bend:2055998 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12291, end:12270) A=91302 nt (start:11902, end:11881) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730762, end:730783) B=3531543 nt (start:3200336, end:3200315) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#37 -> -4025055 <- tig#r.2, A=853709 nt (start:539057, end:539078) B=5014909 nt (start:1284506, end:1284527) CALCULATED DISTANCE APART: -4025055 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#118 -> -33564 <- tig#97, B=66247 nt (start:37557, end:37578) A=91050 nt (start:24874, end:24853) CALCULATED DISTANCE APART: -33564 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#34 -> -1070125 <- tig#r.93, A=1705564 nt (start:662421, end:662442) B=152036 nt (start:105054, end:105075) CALCULATED DISTANCE APART: -1070125 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260032, end:2260053) B=356404 nt (start:343192, end:343213) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig. Pair (ACCATCTCATGACCAAGTCTC - TGAGGAGTAATGCTGCACTAA) on contig 25 (1290536 nt) Astart:990294 Aend:990273 Bstart:975760 Bend:975781 CALCULATED DISTANCE APART: 14534 Pairs unsatisfied in pairing logic within a contig. Pair (AAAAAACATACATATAGACAG - CCGGACCACGAAGTGATATAT) on contig 19 (3531543 nt) Astart:3058483 Aend:3058462 Bstart:3050237 Bend:3050216 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#49 -> -1152645 <- tig#r.43, A=399963 nt (start:351816, end:351837) B=1235946 nt (start:111448, end:111469) CALCULATED DISTANCE APART: -1152645 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#37 -> -2621467 <- tig#13, A=853709 nt (start:538087, end:538108) B=2650694 nt (start:2325845, end:2325824) CALCULATED DISTANCE APART: -2621467 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GAGTCCATGATCCTTCCAAGA - GAGCTAAAAAAGAGAGTTGAT) on contig 15 (3712591 nt) Astart:1716788 Aend:1716809 Bstart:1731230 Bend:1731251 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#11 -> -3815667 <- tig#56, B=4628067 nt (start:890912, end:890933) A=262460 nt (start:98512, end:98491) CALCULATED DISTANCE APART: -3815667 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282287, end:282308) B=2196 nt (start:468, end:447) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#8 -> -5154595 <- tig#4, B=5070776 nt (start:906446, end:906467) A=3837743 nt (start:1010265, end:1010244) CALCULATED DISTANCE APART: -5154595 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17380, end:17359) A=1227811 nt (start:6435, end:6414) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219551, end:4219530) A=2598 nt (start:2070, end:2049) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig. Pair (GCTCTCTTCTCTCGTATGATT - TTGAAACAACAAACAAAGCAT) on contig 1 (4853111 nt) Astart:346260 Aend:346281 Bstart:391537 Bend:391516 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33534, end:33513) A=855454 nt (start:18915, end:18894) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185964, end:4185943) A=3712591 nt (start:597, end:576) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4186129, end:4186108) A=3712591 nt (start:432, end:411) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig. Pair (TACTCAATGGTTGGTGCAGGG - TGGTTTGAAGGTTTGGTTCAA) on contig 1 (4853111 nt) Astart:347005 Aend:347026 Bstart:392282 Bend:392261 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.403 -> -2330792 <- tig#13, B=1321 nt (start:110, end:89) A=2650694 nt (start:2350682, end:2350661) CALCULATED DISTANCE APART: -2330792 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#9 -> -3469176 <- tig#58, A=3747885 nt (start:435723, end:435744) B=374416 nt (start:177014, end:176993) CALCULATED DISTANCE APART: -3469176 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GTTTTTATAACCTTGATATAG - AGCCAAAACTCAAAAGCATGC) on contig 19 (3531543 nt) Astart:3058403 Aend:3058382 Bstart:3050317 Bend:3050296 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#75 -> -98050 <- tig#123, A=373953 nt (start:265222, end:265243) B=42452 nt (start:9319, end:9298) CALCULATED DISTANCE APART: -98050 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.47 -> -199625 <- tig#2, B=471458 nt (start:121804, end:121783) A=5014909 nt (start:97821, end:97800) CALCULATED DISTANCE APART: -199625 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#73 -> -6356 <- tig#69, A=171056 nt (start:159578, end:159599) B=186132 nt (start:14878, end:14857) CALCULATED DISTANCE APART: -6356 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33694, end:33673) A=855454 nt (start:18755, end:18734) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig. Pair (TAGTTTTGGAATTTAAACATA - TCACCTATAAACCAGGCTCAT) on contig 41 (667251 nt) Astart:89303 Aend:89282 Bstart:72503 Bend:72524 CALCULATED DISTANCE APART: 16800 Pairs unsatisfied in distance within a contig. Pair (ACGAGGCTAAATTCATTTTTC - TTGTCTGGCCAAAGTGGTTTT) on contig 2 (5014909 nt) Astart:1269956 Aend:1269977 Bstart:1284618 Bend:1284597 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#81 -> -2917593 <- tig#r.7, A=258617 nt (start:239340, end:239361) B=3534247 nt (start:615931, end:615952) CALCULATED DISTANCE APART: -2917593 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#74 -> -453293 <- tig#r.47, A=238371 nt (start:73463, end:73484) B=471458 nt (start:163073, end:163094) CALCULATED DISTANCE APART: -453293 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -621133 <- tig#r.66, A=2766197 nt (start:2129738, end:2129759) B=201913 nt (start:197239, end:197260) CALCULATED DISTANCE APART: -621133 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GCCATCCTTCTTAGCTTTGTG - CACGGAATTCTGGTCTTGATG) on contig 19 (3531543 nt) Astart:3059048 Aend:3059027 Bstart:3049672 Bend:3049651 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#11 -> -1263394 <- tig#3, B=4628067 nt (start:3649737, end:3649758) A=3889482 nt (start:305064, end:305043) CALCULATED DISTANCE APART: -1263394 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#39 -> -537844 <- tig#r.54, A=736718 nt (start:483673, end:483694) B=625914 nt (start:321115, end:321136) CALCULATED DISTANCE APART: -537844 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ACTATAAAAAGAAACAGCTGT - CATGATTCTCCAAGGAGAGTT) on contig 15 (3712591 nt) Astart:1717973 Aend:1717994 Bstart:1730045 Bend:1730066 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:283062, end:283083) B=2196 nt (start:1243, end:1222) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig. Pair (CACGTACCATCTCATGACCAA - AGTAATGCTGCACTAATGGTT) on contig 25 (1290536 nt) Astart:990299 Aend:990278 Bstart:975765 Bend:975786 CALCULATED DISTANCE APART: 14534 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#39 -> -500696 <- tig#r.30, A=736718 nt (start:679381, end:679402) B=1050452 nt (start:587093, end:587114) CALCULATED DISTANCE APART: -500696 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.403 -> -2330792 <- tig#13, B=1321 nt (start:35, end:14) A=2650694 nt (start:2350757, end:2350736) CALCULATED DISTANCE APART: -2330792 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#34 -> -1107961 <- tig#79, A=1705564 nt (start:661461, end:661482) B=136600 nt (start:83858, end:83837) CALCULATED DISTANCE APART: -1107961 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#34 -> -1056103 <- tig#r.65, A=1705564 nt (start:662486, end:662507) B=286124 nt (start:253099, end:253120) CALCULATED DISTANCE APART: -1056103 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728388, end:728409) A=1096 nt (start:473, end:452) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -3906033 <- tig#r.11, A=262460 nt (start:73576, end:73597) B=4628067 nt (start:890918, end:890939) CALCULATED DISTANCE APART: -3906033 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TCAAAAAAAGAAGAAGGAAAT - CTTTTTATTAAATATGCCAAG) on contig 15 (3712591 nt) Astart:1719413 Aend:1719434 Bstart:1728605 Bend:1728626 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#11 -> -4878223 <- tig#29, A=4628067 nt (start:683808, end:683829) B=1463708 nt (start:953964, end:953943) CALCULATED DISTANCE APART: -4878223 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260787, end:2260808) B=356404 nt (start:342437, end:342458) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig. Pair (GCCACTCACTACAGTGCTCCG - GGTTTCAGCCAAGAAGCGGCT) on contig 41 (667251 nt) Astart:88073 Aend:88052 Bstart:75393 Bend:75414 CALCULATED DISTANCE APART: 12680 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.20 -> -2413469 <- tig#37, B=2328057 nt (start:2055450, end:2055429) A=853709 nt (start:378019, end:377998) CALCULATED DISTANCE APART: -2413469 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730457, end:730478) B=3531543 nt (start:3200031, end:3200010) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTTGGATTTGGCTAGACTCCT - TAGTGTATGAAAAGAATATAA) on contig 13 (2650694 nt) Astart:2351007 Aend:2350986 Bstart:2336069 Bend:2336090 CALCULATED DISTANCE APART: 14938 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#74 -> -258226 <- tig#56, B=238371 nt (start:58986, end:59007) A=262460 nt (start:98841, end:98820) CALCULATED DISTANCE APART: -258226 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.35 -> -676591 <- tig#2, B=1135475 nt (start:599405, end:599384) A=5014909 nt (start:97186, end:97165) CALCULATED DISTANCE APART: -676591 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGTTAAATTTCAATCTATTTG - CTTGGACGAGCTACGCTAAAC) on contig 30 (1050452 nt) Astart:650479 Aend:650500 Bstart:666245 Bend:666224 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#127 -> -57440 <- tig#17, B=80830 nt (start:63255, end:63276) A=1959065 nt (start:59865, end:59844) CALCULATED DISTANCE APART: -57440 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#7 -> -3853079 <- tig#36, A=3534247 nt (start:145999, end:146020) B=855454 nt (start:484831, end:484810) CALCULATED DISTANCE APART: -3853079 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.34 -> -1666421 <- tig#93, B=1705564 nt (start:1679303, end:1679282) A=152036 nt (start:7118, end:7097) CALCULATED DISTANCE APART: -1666421 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTTATTGTTTCACTCTTTGTT - ACTAAAGCTATATGATCACAA) on contig 19 (3531543 nt) Astart:3058543 Aend:3058522 Bstart:3050177 Bend:3050156 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#60 -> -2598812 <- tig#19, B=232804 nt (start:136623, end:136644) A=3531543 nt (start:2522631, end:2522610) CALCULATED DISTANCE APART: -2598812 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -40662 <- tig#443, A=736718 nt (start:676571, end:676592) B=1213 nt (start:515, end:494) CALCULATED DISTANCE APART: -40662 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCTATACAGTTTTACATATAA - CAATGCGTTTTGAAAGATCAT) on contig 37 (853709 nt) Astart:838759 Aend:838738 Bstart:823254 Bend:823275 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135993, end:136014) B=15068 nt (start:1683, end:1704) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460889, end:460868) A=1345436 nt (start:24771, end:24750) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGTAACAAACTAAATAATTAG - AAATTACCGTGTGACCTGAAC) on contig 60 (232804 nt) Astart:31267 Aend:31288 Bstart:57545 Bend:57524 CALCULATED DISTANCE APART: 26278 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728363, end:728384) A=1096 nt (start:448, end:427) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136713, end:136734) B=15068 nt (start:963, end:984) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -8119244 <- tig#6, B=3747885 nt (start:376435, end:376456) A=6870868 nt (start:4767794, end:4767773) CALCULATED DISTANCE APART: -8119244 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AATTTCTTGTTAAAAAATATT - TCCGAAATTGCAAGCTGTAAG) on contig 19 (3531543 nt) Astart:3059786 Aend:3059765 Bstart:3048937 Bend:3048916 Pairs unsatisfied in distance within a contig. Pair (TATGAGGATGTTTTGATGGAG - CATATTCAGCTGAAACAAGTC) on contig 27 (1227811 nt) Astart:434685 Aend:434706 Bstart:450938 Bend:450917 CALCULATED DISTANCE APART: 16253 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#48 -> -1362255 <- tig#32, B=487359 nt (start:11536, end:11557) A=972151 nt (start:906432, end:906411) CALCULATED DISTANCE APART: -1362255 < -2000 Pairs unsatisfied in distance within a contig. Pair (GCATCAGAGAGAGCTTTCTCT - GCACTAGCAAAAGTATTGGTG) on contig 15 (3712591 nt) Astart:3352227 Aend:3352248 Bstart:3377213 Bend:3377192 CALCULATED DISTANCE APART: 24986 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.91 -> -51038 <- tig#31, B=101959 nt (start:16635, end:16614) A=976128 nt (start:54403, end:54382) CALCULATED DISTANCE APART: -51038 < -2000 Pairs unsatisfied in distance within a contig. Pair (GGATTGATGCTGAAGATTGTG - AGCTAGCTTACCAGGTATGAC) on contig 6 (6870868 nt) Astart:4411849 Aend:4411870 Bstart:4445803 Bend:4445782 CALCULATED DISTANCE APART: 33954 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282572, end:282593) B=2196 nt (start:753, end:732) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#433 -> -944078 <- tig#r.29, A=1238 nt (start:91, end:112) B=1463708 nt (start:500777, end:500798) CALCULATED DISTANCE APART: -944078 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -33694 <- tig#167, A=354284 nt (start:325779, end:325800) B=25236 nt (start:25189, end:25168) CALCULATED DISTANCE APART: -33694 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#48 -> -3151835 <- tig#12, B=487359 nt (start:39173, end:39194) A=2766197 nt (start:2723649, end:2723628) CALCULATED DISTANCE APART: -3151835 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCTTCTTTCTTTGGCAAGGCT - TCATCCTTTTTGCTATGCCTT) on contig 5 (3689108 nt) Astart:1169962 Aend:1169983 Bstart:1185097 Bend:1185076 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#2 -> -6085454 <- tig#25, A=5014909 nt (start:11520, end:11541) B=1290536 nt (start:1102065, end:1102044) CALCULATED DISTANCE APART: -6085454 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CAAAAGAGAATAGGAATATAA - GGGTTCTATTTATAGCACTCC) on contig 15 (3712591 nt) Astart:1717873 Aend:1717894 Bstart:1730145 Bend:1730166 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.403 -> -2330792 <- tig#13, B=1321 nt (start:105, end:84) A=2650694 nt (start:2350687, end:2350666) CALCULATED DISTANCE APART: -2330792 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTACATACTTACGACGATTTT - CTCTATTCTTGTCTCTGATGA) on contig 25 (1290536 nt) Astart:990139 Aend:990118 Bstart:975605 Bend:975626 CALCULATED DISTANCE APART: 14534 Pairs unsatisfied in pairing logic within a contig. Pair (TGTGTTTCTTTATAAGTTATC - TCTTACCTCTAATGCCAATTA) on contig 19 (3531543 nt) Astart:3059581 Aend:3059560 Bstart:3049142 Bend:3049121 Pairs unsatisfied in distance within a contig. Pair (CCTACAATTAAAAATTTATAA - TAATGCACACCTTTTAATTAC) on contig 34 (1705564 nt) Astart:679464 Aend:679443 Bstart:664501 Bend:664522 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig. Pair (TAAAGTATGGTTTTCGAAGTT - TGACGAAGATAAATATCTATT) on contig 109 (66564 nt) Astart:5824 Aend:5803 Bstart:188 Bend:209 CALCULATED DISTANCE APART: 5636 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#4 -> -1562545 <- tig#101, A=3837743 nt (start:2278812, end:2278833) B=84691 nt (start:23614, end:23593) CALCULATED DISTANCE APART: -1562545 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.21 -> -3157957 <- tig#14, B=1811326 nt (start:1176624, end:1176603) A=2271162 nt (start:2001333, end:2001312) CALCULATED DISTANCE APART: -3157957 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.48 -> -352632 <- tig#387, B=487359 nt (start:372115, end:372094) A=1354 nt (start:517, end:496) CALCULATED DISTANCE APART: -352632 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728873, end:728894) A=1096 nt (start:958, end:937) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#26 -> -90650 <- tig#95, B=1332708 nt (start:1310293, end:1310314) A=92653 nt (start:88235, end:88214) CALCULATED DISTANCE APART: -90650 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16775, end:16754) A=1227811 nt (start:7040, end:7019) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6228 <- tig#57, B=27696 nt (start:1559, end:1580) A=258385 nt (start:91, end:70) CALCULATED DISTANCE APART: -6228 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.34 -> -1667664 <- tig#93, B=1705564 nt (start:1679306, end:1679285) A=152036 nt (start:8358, end:8337) CALCULATED DISTANCE APART: -1667664 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460364, end:460343) A=1345436 nt (start:25296, end:25275) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CATAAGTCAAGAAGTCGAGAA - TTTTCCTCTTCAATAATTTTC) on contig 19 (3531543 nt) Astart:3059446 Aend:3059425 Bstart:3049277 Bend:3049256 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082822, end:2082843) B=976128 nt (start:960700, end:960721) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#27 -> -2274981 <- tig#14, A=1227811 nt (start:935584, end:935605) B=2271162 nt (start:2002754, end:2002733) CALCULATED DISTANCE APART: -2274981 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TGTTTTGCCTCTCATACTTTC - GTCGAGCTTTCGTCGTCTCCT) on contig 9 (3747885 nt) Astart:2878249 Aend:2878228 Bstart:2862916 Bend:2862895 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17455, end:17434) A=1227811 nt (start:6360, end:6339) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#46 -> -3144173 <- tig#12, B=577887 nt (start:138488, end:138509) A=2766197 nt (start:2724774, end:2724753) CALCULATED DISTANCE APART: -3144173 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728908, end:728929) A=1096 nt (start:993, end:972) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig. Pair (ACACATATTAAACTCTAACAC - AGAGTTTAACCGCAGCCTCGG) on contig 15 (3712591 nt) Astart:2103541 Aend:2103520 Bstart:2053617 Bend:2053638 CALCULATED DISTANCE APART: 49924 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33934, end:33913) A=855454 nt (start:18515, end:18494) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATGAGAGTTAACAGAAGAGAT - AATCTTGGACTTGAACTTATT) on contig 26 (1332708 nt) Astart:324722 Aend:324743 Bstart:396832 Bend:396811 CALCULATED DISTANCE APART: 72110 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10203, end:10182) A=2766197 nt (start:2151360, end:2151339) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATTGATAGTTTCCTCACTTGC - GCCCAAATGATATTTTTGCAA) on contig 27 (1227811 nt) Astart:434500 Aend:434521 Bstart:450753 Bend:450732 CALCULATED DISTANCE APART: 16253 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#9 -> -6194695 <- tig#r.7, A=3747885 nt (start:434568, end:434589) B=3534247 nt (start:632869, end:632890) CALCULATED DISTANCE APART: -6194695 < -2000 Pairs unsatisfied in distance within a contig. Pair (GTATGTTTTGTTGTGTTAGAT - AAACAATTTTTATTCCACTCA) on contig 5 (3689108 nt) Astart:1178332 Aend:1178311 Bstart:1163198 Bend:1163219 CALCULATED DISTANCE APART: 15134 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#207 -> -1387873 <- tig#19, B=5890 nt (start:444, end:465) A=3531543 nt (start:1402427, end:1402406) CALCULATED DISTANCE APART: -1387873 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2275, end:2296) A=258385 nt (start:811, end:790) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.101 -> -46827 <- tig#107, B=84691 nt (start:23874, end:23853) A=68734 nt (start:42953, end:42932) CALCULATED DISTANCE APART: -46827 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#10 -> -2964281 <- tig#103, B=3047199 nt (start:261700, end:261721) A=211876 nt (start:198782, end:198761) CALCULATED DISTANCE APART: -2964281 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTTGCTTCTCTGCCAATTCAA - AATTTAATTTCATGTTAAGTC) on contig 15 (3712591 nt) Astart:3350385 Aend:3350406 Bstart:3375373 Bend:3375352 CALCULATED DISTANCE APART: 24988 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282517, end:282538) B=2196 nt (start:698, end:677) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#207 -> -1387873 <- tig#19, B=5890 nt (start:419, end:440) A=3531543 nt (start:1402402, end:1402381) CALCULATED DISTANCE APART: -1387873 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.91 -> -51041 <- tig#31, B=101959 nt (start:16795, end:16774) A=976128 nt (start:54246, end:54225) CALCULATED DISTANCE APART: -51041 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.409 -> -1019852 <- tig#23, B=1303 nt (start:601, end:580) A=1345436 nt (start:1039251, end:1039230) CALCULATED DISTANCE APART: -1019852 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260982, end:2261003) B=356404 nt (start:342242, end:342263) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CCCAAATGGAGATGAAATTTA - GACTAGAGAGTGAAGATCCAA) on contig 19 (3531543 nt) Astart:3058718 Aend:3058697 Bstart:3050002 Bend:3049981 Pairs unsatisfied in distance within a contig. Pair (TAAAATGTCTTGAATAATGTT - CAACATGTTTAACTTTTAGAG) on contig 37 (853709 nt) Astart:538497 Aend:538518 Bstart:551170 Bend:551149 CALCULATED DISTANCE APART: 12673 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#6 -> -45063 <- tig#75, B=6870868 nt (start:6825838, end:6825859) A=373953 nt (start:20033, end:20012) CALCULATED DISTANCE APART: -45063 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#12 -> -245465 <- tig#56, B=2766197 nt (start:2696556, end:2696577) A=262460 nt (start:195824, end:195803) CALCULATED DISTANCE APART: -245465 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#26 -> -90650 <- tig#95, B=1332708 nt (start:1310453, end:1310474) A=92653 nt (start:88395, end:88374) CALCULATED DISTANCE APART: -90650 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTAATGGTTGGTACTTAGTAG - TATTCTGTAGATGACGGTCTC) on contig 37 (853709 nt) Astart:838509 Aend:838488 Bstart:823004 Bend:823025 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2410, end:2431) A=258385 nt (start:946, end:925) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730002, end:730023) B=3531543 nt (start:3199576, end:3199555) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10448, end:10427) A=2766197 nt (start:2151115, end:2151094) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.403 -> -2330792 <- tig#13, B=1321 nt (start:435, end:414) A=2650694 nt (start:2350357, end:2350336) CALCULATED DISTANCE APART: -2330792 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.101 -> -46827 <- tig#107, B=84691 nt (start:23879, end:23858) A=68734 nt (start:42948, end:42927) CALCULATED DISTANCE APART: -46827 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATGTACCTGCAAAATAGAAAC - GTTTCAGTCGTCCAATTTGTG) on contig 4 (3837743 nt) Astart:2358316 Aend:2358337 Bstart:2359746 Bend:2359767 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -40662 <- tig#443, A=736718 nt (start:676491, end:676512) B=1213 nt (start:435, end:414) CALCULATED DISTANCE APART: -40662 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728348, end:728369) A=1096 nt (start:433, end:412) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig. Pair (GAAGCAAGAACCACATGAAAG - AAAGTTTAATTACCAGGATCA) on contig 5 (3689108 nt) Astart:1171892 Aend:1171913 Bstart:1187028 Bend:1187007 CALCULATED DISTANCE APART: 15136 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#12 -> -71592 <- tig#69, A=2766197 nt (start:2689523, end:2689544) B=186132 nt (start:14918, end:14897) CALCULATED DISTANCE APART: -71592 < -2000 Pairs unsatisfied in distance within a contig. Pair (CGTTGAGGCGATCCGATTTCT - TTATCACCATACTTCAGATCT) on contig 5 (3689108 nt) Astart:1171802 Aend:1171823 Bstart:1186938 Bend:1186917 CALCULATED DISTANCE APART: 15136 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#46 -> -523088 <- tig#r.48, A=577887 nt (start:136146, end:136167) B=487359 nt (start:386012, end:386033) CALCULATED DISTANCE APART: -523088 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAAGAATTTAGAAGAAAACCC - AAACAAGCAAAGAACAACACG) on contig 75 (373953 nt) Astart:275705 Aend:275726 Bstart:300423 Bend:300402 CALCULATED DISTANCE APART: 24718 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#12 -> -580120 <- tig#11, B=2766197 nt (start:2453469, end:2453490) A=4628067 nt (start:287392, end:287371) CALCULATED DISTANCE APART: -580120 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.101 -> -46850 <- tig#107, B=84691 nt (start:24174, end:24153) A=68734 nt (start:42676, end:42655) CALCULATED DISTANCE APART: -46850 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#34 -> -877091 <- tig#r.90, A=1705564 nt (start:813804, end:813825) B=112304 nt (start:106973, end:106994) CALCULATED DISTANCE APART: -877091 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ACTCTCACTTGTTCACTCGGA - GGGCACTTGCGGCGTCCACCG) on contig 15 (3712591 nt) Astart:1718438 Aend:1718459 Bstart:1729580 Bend:1729601 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136588, end:136609) B=15068 nt (start:1088, end:1109) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.48 -> -352632 <- tig#387, B=487359 nt (start:372120, end:372099) A=1354 nt (start:512, end:491) CALCULATED DISTANCE APART: -352632 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10403, end:10382) A=2766197 nt (start:2151160, end:2151139) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259947, end:2259968) B=356404 nt (start:343277, end:343298) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:1735, end:1756) A=258385 nt (start:271, end:250) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730997, end:731018) B=3531543 nt (start:3200571, end:3200550) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3583 <- tig#26, B=1171658 nt (start:1171193, end:1171214) A=1332708 nt (start:23118, end:23097) CALCULATED DISTANCE APART: -3583 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#41 -> -651287 <- tig#17, B=667251 nt (start:486713, end:486734) A=1959065 nt (start:490749, end:490728) CALCULATED DISTANCE APART: -651287 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -7514397 <- tig#2, B=4628067 nt (start:4149952, end:4149931) A=5014909 nt (start:3384445, end:3384424) CALCULATED DISTANCE APART: -7514397 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#28 -> -913193 <- tig#475, A=1171658 nt (start:238595, end:238616) B=1157 nt (start:130, end:109) CALCULATED DISTANCE APART: -913193 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#29 -> -579824 <- tig#28, A=1463708 nt (start:1144545, end:1144566) B=1171658 nt (start:280661, end:280640) CALCULATED DISTANCE APART: -579824 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#9 -> -2729019 <- tig#69, A=3747885 nt (start:1134150, end:1134171) B=186132 nt (start:135284, end:135263) CALCULATED DISTANCE APART: -2729019 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#35 -> -1944863 <- tig#18, A=1135475 nt (start:357272, end:357293) B=1738864 nt (start:1186660, end:1186639) CALCULATED DISTANCE APART: -1944863 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#26 -> -90650 <- tig#95, B=1332708 nt (start:1310438, end:1310459) A=92653 nt (start:88380, end:88359) CALCULATED DISTANCE APART: -90650 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728658, end:728679) A=1096 nt (start:743, end:722) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#119 -> -7707 <- tig#r.49, A=46878 nt (start:31840, end:31861) B=399963 nt (start:387294, end:387315) CALCULATED DISTANCE APART: -7707 < -2000 Pairs unsatisfied in distance within a contig. Pair (CAGAGATTGAGCGGAGAGTAC - TGACAAACCTGGAACCCTACA) on contig 4 (3837743 nt) Astart:1822804 Aend:1822783 Bstart:1799729 Bend:1799750 CALCULATED DISTANCE APART: 23075 Pairs unsatisfied in distance within a contig. Pair (AAATCACTTCACATTCCGTCG - CTTGCTTCATTGTTCAGAAGC) on contig 6 (6870868 nt) Astart:1138184 Aend:1138163 Bstart:1129757 Bend:1129778 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in pairing logic within a contig. Pair (TTCATTTTTCTAGTGTCTCAT - ACGTGCCCAGTCATCTTCTTC) on contig 14 (2271162 nt) Astart:1848906 Aend:1848885 Bstart:2003844 Bend:2003823 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282482, end:282503) B=2196 nt (start:663, end:642) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig. Pair (TACATTAAGGTCAAAATTTGG - TCTCTCGACAACTGGTAATAT) on contig 118 (66247 nt) Astart:3174 Aend:3195 Bstart:6600 Bend:6579 CALCULATED DISTANCE APART: 3426 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#119 -> -7707 <- tig#r.49, A=46878 nt (start:32090, end:32111) B=399963 nt (start:387044, end:387065) CALCULATED DISTANCE APART: -7707 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:729877, end:729898) B=3531543 nt (start:3199451, end:3199430) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728748, end:728769) A=1096 nt (start:833, end:812) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730207, end:730228) B=3531543 nt (start:3199781, end:3199760) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#433 -> -944078 <- tig#r.29, A=1238 nt (start:88, end:109) B=1463708 nt (start:500780, end:500801) CALCULATED DISTANCE APART: -944078 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -40662 <- tig#443, A=736718 nt (start:676966, end:676987) B=1213 nt (start:910, end:889) CALCULATED DISTANCE APART: -40662 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#81 -> -141016 <- tig#74, A=258617 nt (start:239835, end:239856) B=238371 nt (start:142234, end:142213) CALCULATED DISTANCE APART: -141016 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#4 -> -3798685 <- tig#16, B=3837743 nt (start:350905, end:350926) A=2098954 nt (start:331847, end:331826) CALCULATED DISTANCE APART: -3798685 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -1335675 <- tig#4, B=3747885 nt (start:2858737, end:2858758) A=3837743 nt (start:466527, end:466506) CALCULATED DISTANCE APART: -1335675 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#5 -> -5542227 <- tig#7, B=3689108 nt (start:381533, end:381554) A=3534247 nt (start:2254652, end:2254631) CALCULATED DISTANCE APART: -5542227 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GCTGTCGATCTCTTTCATTGT - TGAATACACCACTCTCCATCC) on contig 4 (3837743 nt) Astart:2357841 Aend:2357862 Bstart:2360221 Bend:2360242 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.257 -> -2902765 <- tig#8, B=1995 nt (start:1431, end:1410) A=5070776 nt (start:2921334, end:2921313) CALCULATED DISTANCE APART: -2902765 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16345, end:16324) A=1227811 nt (start:7470, end:7449) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTAGTAGTTATATAGTGTTGT - GATTGTCAGAGATTATCGAAA) on contig 15 (3712591 nt) Astart:1719393 Aend:1719414 Bstart:1728625 Bend:1728646 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17015, end:16994) A=1227811 nt (start:6800, end:6779) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#67 -> -1122910 <- tig#r.43, A=197815 nt (start:64215, end:64236) B=1235946 nt (start:226636, end:226657) CALCULATED DISTANCE APART: -1122910 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AAGAAAGAAAACATTCAACTT - AATGATTCATATCGTTGTGAG) on contig 4 (3837743 nt) Astart:2358366 Aend:2358387 Bstart:2359696 Bend:2359717 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -1168778 <- tig#384, A=5070776 nt (start:3882755, end:3882776) B=1359 nt (start:757, end:736) CALCULATED DISTANCE APART: -1168778 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#131 -> -2484301 <- tig#12, B=36503 nt (start:13872, end:13893) A=2766197 nt (start:2481670, end:2481649) CALCULATED DISTANCE APART: -2484301 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGATAGAAGCAGCTAGAATCT - CTCAACAATGGACTTTTTGCT) on contig 1 (4853111 nt) Astart:347035 Aend:347056 Bstart:392312 Bend:392291 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728768, end:728789) A=1096 nt (start:853, end:832) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#119 -> -7707 <- tig#r.49, A=46878 nt (start:31805, end:31826) B=399963 nt (start:387329, end:387350) CALCULATED DISTANCE APART: -7707 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#305 -> -2202335 <- tig#r.19, A=1638 nt (start:337, end:358) B=3531543 nt (start:1310509, end:1310530) CALCULATED DISTANCE APART: -2202335 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082407, end:2082428) B=976128 nt (start:961115, end:961136) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATTTCTGCAAGAAAAAAAATA - AGAATGTGACAGCGCTGTGAA) on contig 27 (1227811 nt) Astart:434535 Aend:434556 Bstart:450788 Bend:450767 CALCULATED DISTANCE APART: 16253 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -3959278 <- tig#2, B=3747885 nt (start:2104290, end:2104311) A=5014909 nt (start:2335683, end:2335662) CALCULATED DISTANCE APART: -3959278 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#12 -> -245456 <- tig#56, B=2766197 nt (start:2696536, end:2696557) A=262460 nt (start:195795, end:195774) CALCULATED DISTANCE APART: -245456 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#34 -> -1056226 <- tig#r.65, A=1705564 nt (start:662341, end:662362) B=286124 nt (start:253121, end:253142) CALCULATED DISTANCE APART: -1056226 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#56 -> -532325 <- tig#5, A=262460 nt (start:70360, end:70381) B=3689108 nt (start:360225, end:360204) CALCULATED DISTANCE APART: -532325 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATGGAAATGGGGAACGGGACA - TATATCCAACTATGCGAGTCT) on contig 5 (3689108 nt) Astart:1169652 Aend:1169673 Bstart:1184787 Bend:1184766 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig. Pair (ATTAGATGATTAAACTTACTT - CCTGATGCGAGGATGCTTTTC) on contig 131 (36503 nt) Astart:30912 Aend:30891 Bstart:14542 Bend:14563 CALCULATED DISTANCE APART: 16370 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#67 -> -702543 <- tig#r.10, A=197815 nt (start:64209, end:64230) B=3047199 nt (start:2458262, end:2458283) CALCULATED DISTANCE APART: -702543 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#106 -> -1441975 <- tig#29, B=117163 nt (start:27386, end:27407) A=1463708 nt (start:1372198, end:1372177) CALCULATED DISTANCE APART: -1441975 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459074, end:459053) A=1345436 nt (start:26586, end:26565) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135068, end:135089) B=15068 nt (start:2608, end:2629) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.125 -> -53978 <- tig#142, B=54013 nt (start:49474, end:49453) A=24988 nt (start:24504, end:24483) CALCULATED DISTANCE APART: -53978 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260667, end:2260688) B=356404 nt (start:342557, end:342578) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185734, end:4185713) A=3712591 nt (start:827, end:806) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.53 -> -306382 <- tig#279, B=354284 nt (start:325794, end:325773) A=1777 nt (start:588, end:567) CALCULATED DISTANCE APART: -306382 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:458959, end:458938) A=1345436 nt (start:26701, end:26680) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#74 -> -453293 <- tig#r.47, A=238371 nt (start:73378, end:73399) B=471458 nt (start:163158, end:163179) CALCULATED DISTANCE APART: -453293 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260192, end:2260213) B=356404 nt (start:343032, end:343053) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTCATCAAGCAGTTCGTCACG - GAATCTTGCTTTAGATAGAAG) on contig 15 (3712591 nt) Astart:1717323 Aend:1717344 Bstart:1730695 Bend:1730716 Pairs unsatisfied in distance within a contig. Pair (CTCGGTATGGCCGCATTGATG - TCAAAGGAAGTCCAAACTCAT) on contig 30 (1050452 nt) Astart:649129 Aend:649150 Bstart:664895 Bend:664874 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -214292 <- tig#6, A=354284 nt (start:134060, end:134081) B=6870868 nt (start:14068, end:14047) CALCULATED DISTANCE APART: -214292 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#611 -> -162268 <- tig#r.75, A=939 nt (start:586, end:607) B=373953 nt (start:192038, end:192059) CALCULATED DISTANCE APART: -162268 < -2000 Pairs unsatisfied in distance within a contig. Pair (AATCACACGTACCATCTCATG - TGCTGCACTAATGGTTCTTGT) on contig 25 (1290536 nt) Astart:990304 Aend:990283 Bstart:975770 Bend:975791 CALCULATED DISTANCE APART: 14534 Pairs unsatisfied in distance within a contig. Pair (GAAGCTGAAGACATATACTAT - TCGAGATTATCATTTCATTTT) on contig 5 (3689108 nt) Astart:1169417 Aend:1169438 Bstart:1184552 Bend:1184531 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.1 -> -4590186 <- tig#16, B=4853111 nt (start:3207812, end:3207791) A=2098954 nt (start:1402374, end:1402353) CALCULATED DISTANCE APART: -4590186 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730772, end:730793) B=3531543 nt (start:3200346, end:3200325) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.38 -> -1310113 <- tig#33, B=1143067 nt (start:1039464, end:1039443) A=1290487 nt (start:290649, end:290628) CALCULATED DISTANCE APART: -1310113 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#38 -> -1110027 <- tig#78, B=1143067 nt (start:142856, end:142877) A=184063 nt (start:129816, end:129795) CALCULATED DISTANCE APART: -1110027 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGCTGTTGGTATCTTTGAGTT - GCTTCTAAAGAAAACGCGAGT) on contig 1 (4853111 nt) Astart:346835 Aend:346856 Bstart:392112 Bend:392091 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig. Pair (TGTCTTCTAACAAGGAAACAC - GTTTCCTTGTTAGAAGACACA) on contig 167 (25236 nt) Astart:10211 Aend:10190 Bstart:10192 Bend:10213 CALCULATED DISTANCE APART: 19 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#265 -> -3126344 <- tig#4, A=1946 nt (start:1601, end:1622) B=3837743 nt (start:3145999, end:3145978) CALCULATED DISTANCE APART: -3126344 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730527, end:730548) B=3531543 nt (start:3200101, end:3200080) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#46 -> -346479 <- tig#136, B=577887 nt (start:212340, end:212361) A=49085 nt (start:932, end:911) CALCULATED DISTANCE APART: -346479 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282437, end:282458) B=2196 nt (start:618, end:597) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig. Pair (GAAGCGATTTCATGATTACTC - TGGCAAAGACGTTAATAGGTT) on contig 2 (5014909 nt) Astart:1268986 Aend:1269007 Bstart:1283648 Bend:1283627 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#48 -> -91507 <- tig#r.67, A=487359 nt (start:470535, end:470556) B=197815 nt (start:103132, end:103153) CALCULATED DISTANCE APART: -91507 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459934, end:459913) A=1345436 nt (start:25726, end:25705) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.403 -> -2330792 <- tig#13, B=1321 nt (start:190, end:169) A=2650694 nt (start:2350602, end:2350581) CALCULATED DISTANCE APART: -2330792 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260662, end:2260683) B=356404 nt (start:342562, end:342583) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#433 -> -944078 <- tig#r.29, A=1238 nt (start:351, end:372) B=1463708 nt (start:500517, end:500538) CALCULATED DISTANCE APART: -944078 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#11 -> -4878223 <- tig#29, A=4628067 nt (start:683848, end:683869) B=1463708 nt (start:954004, end:953983) CALCULATED DISTANCE APART: -4878223 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGGTGTAGCGATGATGCGAGG - CAAAACAAGAAAACTTGCAAG) on contig 15 (3712591 nt) Astart:1718618 Aend:1718639 Bstart:1729400 Bend:1729421 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16695, end:16674) A=1227811 nt (start:7120, end:7099) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig. Pair (CGCCTCGTAATATAGCAAAGA - AAACCACGAGAACGCTGAGGT) on contig 118 (66247 nt) Astart:2136 Aend:2157 Bstart:7070 Bend:7049 CALCULATED DISTANCE APART: 4934 Pairs unsatisfied in distance within a contig. Pair (AGCTGAAGGAGAGGTTTACAC - ACCTCCTGAGTTCCATTCTCC) on contig 1 (4853111 nt) Astart:346960 Aend:346981 Bstart:392237 Bend:392216 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in pairing logic within a contig. Pair (TTCCAAGGAAAATCTGGTGGC - ATTCGATCCACATATATACGC) on contig 15 (3712591 nt) Astart:1718528 Aend:1718549 Bstart:1729490 Bend:1729511 Pairs unsatisfied in distance within a contig. Pair (GTTGACAGGGGGAGGTAGAAC - CCAAGTCAACCTTATCTAGCT) on contig 2 (5014909 nt) Astart:1269201 Aend:1269222 Bstart:1283863 Bend:1283842 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:729962, end:729983) B=3531543 nt (start:3199536, end:3199515) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135158, end:135179) B=15068 nt (start:2518, end:2539) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.257 -> -2902765 <- tig#8, B=1995 nt (start:1351, end:1330) A=5070776 nt (start:2921414, end:2921393) CALCULATED DISTANCE APART: -2902765 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.38 -> -1310113 <- tig#33, B=1143067 nt (start:1039529, end:1039508) A=1290487 nt (start:290584, end:290563) CALCULATED DISTANCE APART: -1310113 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGGCGATAGATGATGATTGCA - TATTCCCTAGCATGAGAAACA) on contig 37 (853709 nt) Astart:538587 Aend:538608 Bstart:551259 Bend:551238 CALCULATED DISTANCE APART: 12672 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#11 -> -4891256 <- tig#r.46, A=4628067 nt (start:266572, end:266593) B=577887 nt (start:28126, end:28147) CALCULATED DISTANCE APART: -4891256 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#39 -> -357382 <- tig#r.48, A=736718 nt (start:457881, end:457902) B=487359 nt (start:388814, end:388835) CALCULATED DISTANCE APART: -357382 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730692, end:730713) B=3531543 nt (start:3200266, end:3200245) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGAATTGTATCCTTGTTAGAA - GGATACAATTCTTACGCCTTT) on contig 34 (1705564 nt) Astart:1679288 Aend:1679309 Bstart:1679300 Bend:1679279 CALCULATED DISTANCE APART: 12 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#34 -> -15051 <- tig#r.132, A=1705564 nt (start:1679288, end:1679309) B=34686 nt (start:25911, end:25932) CALCULATED DISTANCE APART: -15051 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12851, end:12830) A=91302 nt (start:11342, end:11321) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#7 -> -3853079 <- tig#36, A=3534247 nt (start:146079, end:146100) B=855454 nt (start:484911, end:484890) CALCULATED DISTANCE APART: -3853079 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GCTTGAATGTGCGTACCTCGA - TGTGAATTCCTCATTAACTTC) on contig 48 (487359 nt) Astart:37967 Aend:37988 Bstart:386007 Bend:386028 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#19 -> -2279452 <- tig#86, B=3531543 nt (start:1402383, end:1402404) A=280231 nt (start:170292, end:170271) CALCULATED DISTANCE APART: -2279452 < -2000 Pairs unsatisfied in distance within a contig. Pair (GTTACAGAGTGAAAATGGATG - CGACTGTTAGCAAACGTATGG) on contig 2 (5014909 nt) Astart:1269826 Aend:1269847 Bstart:1284488 Bend:1284467 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#65 -> -597421 <- tig#12, B=286124 nt (start:269925, end:269946) A=2766197 nt (start:601222, end:601201) CALCULATED DISTANCE APART: -597421 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260867, end:2260888) B=356404 nt (start:342357, end:342378) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -214288 <- tig#6, A=354284 nt (start:132864, end:132885) B=6870868 nt (start:12868, end:12847) CALCULATED DISTANCE APART: -214288 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#15 -> -8116131 <- tig#6, B=3712591 nt (start:342979, end:343000) A=6870868 nt (start:4766519, end:4766498) CALCULATED DISTANCE APART: -8116131 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282017, end:282038) B=2196 nt (start:198, end:177) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -1335763 <- tig#4, B=3747885 nt (start:2857542, end:2857563) A=3837743 nt (start:465420, end:465399) CALCULATED DISTANCE APART: -1335763 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#433 -> -944078 <- tig#r.29, A=1238 nt (start:86, end:107) B=1463708 nt (start:500782, end:500803) CALCULATED DISTANCE APART: -944078 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082567, end:2082588) B=976128 nt (start:960955, end:960976) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#119 -> -7707 <- tig#r.49, A=46878 nt (start:32020, end:32041) B=399963 nt (start:387114, end:387135) CALCULATED DISTANCE APART: -7707 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#265 -> -3126344 <- tig#4, A=1946 nt (start:1561, end:1582) B=3837743 nt (start:3145959, end:3145938) CALCULATED DISTANCE APART: -3126344 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TGTTCTTGAATTTTAGGTATC - TTATTAGTTTGGGTCGCTTGG) on contig 15 (3712591 nt) Astart:1717233 Aend:1717254 Bstart:1730785 Bend:1730806 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2980, end:3001) A=258385 nt (start:1516, end:1495) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136518, end:136539) B=15068 nt (start:1158, end:1179) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGTTTATAAAGTAAGATGATA - CACTATCTCTGCAATAAATAT) on contig 34 (1705564 nt) Astart:679309 Aend:679288 Bstart:664346 Bend:664367 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig. Pair (GTAGGATTCAGGGTTTAAGGT - AGAAAGCACTACTTTACTTTT) on contig 184 (9859 nt) Astart:358 Aend:379 Bstart:772 Bend:751 CALCULATED DISTANCE APART: 414 Pairs unsatisfied in distance within a contig. Pair (AATTTCAATCTATTTGTTTCG - AGAAACTTGGACGAGCTACGC) on contig 30 (1050452 nt) Astart:650484 Aend:650505 Bstart:666250 Bend:666229 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#51 -> -301846 <- tig#r.125, A=875428 nt (start:581631, end:581652) B=54013 nt (start:25964, end:25985) CALCULATED DISTANCE APART: -301846 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -1808574 <- tig#r.32, A=2766197 nt (start:1383940, end:1383961) B=972151 nt (start:525834, end:525855) CALCULATED DISTANCE APART: -1808574 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#9 -> -3369808 <- tig#22, A=3747885 nt (start:358178, end:358199) B=1636463 nt (start:101, end:80) CALCULATED DISTANCE APART: -3369808 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460844, end:460823) A=1345436 nt (start:24816, end:24795) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259547, end:2259568) B=356404 nt (start:343677, end:343698) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -214292 <- tig#6, A=354284 nt (start:134305, end:134326) B=6870868 nt (start:14313, end:14292) CALCULATED DISTANCE APART: -214292 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -322558 <- tig#r.572, A=2650694 nt (start:2308875, end:2308896) B=1031 nt (start:292, end:313) CALCULATED DISTANCE APART: -322558 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGCTAATAAAATTCATCTTTT - TCCTACTCATAACACTATATT) on contig 60 (232804 nt) Astart:31337 Aend:31358 Bstart:57615 Bend:57594 CALCULATED DISTANCE APART: 26278 Pairs unsatisfied in pairing logic within a contig. Pair (TTGTTTCTGTAGTATGACTTT - CTTGAAAGAACAACGATTCTG) on contig 21 (1811326 nt) Astart:154795 Aend:154774 Bstart:260902 Bend:260881 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#126 -> -106004 <- tig#80, B=40796 nt (start:38592, end:38613) A=191116 nt (start:123800, end:123779) CALCULATED DISTANCE APART: -106004 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#590 -> -1631326 <- tig#r.34, A=1018 nt (start:362, end:383) B=1705564 nt (start:54894, end:54915) CALCULATED DISTANCE APART: -1631326 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#120 -> -1341554 <- tig#29, B=44710 nt (start:43837, end:43858) A=1463708 nt (start:1360681, end:1360660) CALCULATED DISTANCE APART: -1341554 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#53 -> -314812 <- tig#75, B=354284 nt (start:24764, end:24785) A=373953 nt (start:5292, end:5271) CALCULATED DISTANCE APART: -314812 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTAACCATTCTGCTTGTCTCA - AATATCTTTATTATTAAAGGT) on contig 19 (3531543 nt) Astart:3059821 Aend:3059800 Bstart:3048902 Bend:3048881 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -322558 <- tig#r.572, A=2650694 nt (start:2308995, end:2309016) B=1031 nt (start:172, end:193) CALCULATED DISTANCE APART: -322558 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.155 -> -75138 <- tig#46, B=18420 nt (start:15831, end:15810) A=577887 nt (start:79307, end:79286) CALCULATED DISTANCE APART: -75138 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#103 -> -852675 <- tig#r.40, A=211876 nt (start:6508, end:6529) B=668174 nt (start:867, end:888) CALCULATED DISTANCE APART: -852675 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12286, end:12265) A=91302 nt (start:11907, end:11886) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730007, end:730028) B=3531543 nt (start:3199581, end:3199560) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GAATTTTAATGAAATGTTATA - CCAGCGGTCCTAATTTATTTC) on contig 19 (3531543 nt) Astart:3058323 Aend:3058302 Bstart:3050397 Bend:3050376 Pairs unsatisfied in distance within a contig. Pair (CCGGGTTTAAGGTTTTGGAAA - GGAACCAAATATGGTGTATTT) on contig 37 (853709 nt) Astart:839204 Aend:839183 Bstart:823699 Bend:823720 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259377, end:2259398) B=356404 nt (start:343847, end:343868) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCCAACTATTAGGGATTACGT - TTTGGAGATGGTTACAAATAA) on contig 34 (1705564 nt) Astart:679824 Aend:679803 Bstart:664861 Bend:664882 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#12 -> -1055671 <- tig#16, B=2766197 nt (start:2417981, end:2418002) A=2098954 nt (start:727455, end:727434) CALCULATED DISTANCE APART: -1055671 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#51 -> -2272782 <- tig#9, B=875428 nt (start:502352, end:502373) A=3747885 nt (start:1919706, end:1919685) CALCULATED DISTANCE APART: -2272782 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#39 -> -2984839 <- tig#12, B=736718 nt (start:457373, end:457394) A=2766197 nt (start:2725494, end:2725473) CALCULATED DISTANCE APART: -2984839 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#46 -> -523088 <- tig#r.48, A=577887 nt (start:136136, end:136157) B=487359 nt (start:386022, end:386043) CALCULATED DISTANCE APART: -523088 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGATCTTGTGAGGTTTCAATC - TTGAAGCAAAGTACCCCGCAC) on contig 6 (6870868 nt) Astart:1138624 Aend:1138603 Bstart:1130169 Bend:1130190 CALCULATED DISTANCE APART: 8455 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#51 -> -548590 <- tig#79, B=875428 nt (start:391066, end:391087) A=136600 nt (start:84228, end:84207) CALCULATED DISTANCE APART: -548590 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#19 -> -1649636 <- tig#31, A=3531543 nt (start:1878172, end:1878193) B=976128 nt (start:16265, end:16244) CALCULATED DISTANCE APART: -1649636 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#39 -> -725727 <- tig#r.29, A=736718 nt (start:310458, end:310479) B=1463708 nt (start:1144241, end:1144262) CALCULATED DISTANCE APART: -725727 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460189, end:460168) A=1345436 nt (start:25471, end:25450) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#120 -> -1341554 <- tig#29, B=44710 nt (start:43022, end:43043) A=1463708 nt (start:1359866, end:1359845) CALCULATED DISTANCE APART: -1341554 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10088, end:10067) A=2766197 nt (start:2151475, end:2151454) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12836, end:12815) A=91302 nt (start:11357, end:11336) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGGCTCCATCTCTCTAGGAGA - ATTGCATTCCTACTTATTCAG) on contig 1 (4853111 nt) Astart:346110 Aend:346131 Bstart:391387 Bend:391366 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#12 -> -245465 <- tig#56, B=2766197 nt (start:2696541, end:2696562) A=262460 nt (start:195809, end:195788) CALCULATED DISTANCE APART: -245465 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#77 -> -132351 <- tig#118, B=160344 nt (start:13307, end:13328) A=66247 nt (start:5314, end:5293) CALCULATED DISTANCE APART: -132351 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GTTGAGAATTGTGATTTAACC - AAAGGTATTATCATTCCTACC) on contig 19 (3531543 nt) Astart:3059836 Aend:3059815 Bstart:3048887 Bend:3048866 Pairs unsatisfied in distance within a contig. Pair (TTCACATATGAGTCCTGAAGT - CAAACACCTCTAAATCAACAA) on contig 5 (3689108 nt) Astart:1169762 Aend:1169783 Bstart:1184897 Bend:1184876 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.403 -> -2330792 <- tig#13, B=1321 nt (start:400, end:379) A=2650694 nt (start:2350392, end:2350371) CALCULATED DISTANCE APART: -2330792 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#11 -> -6916350 <- tig#19, B=4628067 nt (start:514638, end:514659) A=3531543 nt (start:2822921, end:2822900) CALCULATED DISTANCE APART: -6916350 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATACACTCAACGATTTCTTCA - GGAGTAGATTATTTTTTATTT) on contig 19 (3531543 nt) Astart:1348194 Aend:1348173 Bstart:1311049 Bend:1311070 CALCULATED DISTANCE APART: 37145 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.34 -> -1659328 <- tig#279, B=1705564 nt (start:1679294, end:1679273) A=1777 nt (start:34, end:13) CALCULATED DISTANCE APART: -1659328 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#57 -> -4506482 <- tig#r.11, A=258385 nt (start:256056, end:256077) B=4628067 nt (start:103914, end:103935) CALCULATED DISTANCE APART: -4506482 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGATGGGCTGGAATTGTTTCT - TCAATATCTAATCTGGCCCAA) on contig 15 (3712591 nt) Astart:2103276 Aend:2103255 Bstart:2056462 Bend:2056483 CALCULATED DISTANCE APART: 46814 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#574 -> -2059 <- tig#122, B=1030 nt (start:419, end:440) A=43035 nt (start:21448, end:21427) CALCULATED DISTANCE APART: -2059 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10518, end:10497) A=2766197 nt (start:2151045, end:2151024) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135218, end:135239) B=15068 nt (start:2458, end:2479) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#3 -> -3618470 <- tig#27, B=3889482 nt (start:316494, end:316515) A=1227811 nt (start:65482, end:65461) CALCULATED DISTANCE APART: -3618470 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#10 -> -2837213 <- tig#45, B=3047199 nt (start:393024, end:393045) A=528133 nt (start:203038, end:203017) CALCULATED DISTANCE APART: -2837213 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.12 -> -5702572 <- tig#7, B=2766197 nt (start:2222255, end:2222234) A=3534247 nt (start:3500317, end:3500296) CALCULATED DISTANCE APART: -5702572 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16340, end:16319) A=1227811 nt (start:7475, end:7454) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#11 -> -4257877 <- tig#r.48, A=4628067 nt (start:450422, end:450443) B=487359 nt (start:387127, end:387148) CALCULATED DISTANCE APART: -4257877 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260337, end:2260358) B=356404 nt (start:342887, end:342908) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#37 -> -738657 <- tig#r.53, A=853709 nt (start:109427, end:109448) B=354284 nt (start:339909, end:339930) CALCULATED DISTANCE APART: -738657 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#64 -> -210549 <- tig#109, B=211265 nt (start:902, end:923) A=66564 nt (start:20186, end:20165) CALCULATED DISTANCE APART: -210549 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.12 -> -5702563 <- tig#7, B=2766197 nt (start:2222250, end:2222229) A=3534247 nt (start:3500313, end:3500292) CALCULATED DISTANCE APART: -5702563 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#46 -> -3500669 <- tig#6, A=577887 nt (start:566900, end:566921) B=6870868 nt (start:3509682, end:3509661) CALCULATED DISTANCE APART: -3500669 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#19 -> -1649636 <- tig#31, A=3531543 nt (start:1878732, end:1878753) B=976128 nt (start:16825, end:16804) CALCULATED DISTANCE APART: -1649636 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCCTCTATGATGCTTGTGAGC - TGGTAATTTTTTACAGCTTAG) on contig 5 (3689108 nt) Astart:1170027 Aend:1170048 Bstart:1185162 Bend:1185141 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.28 -> -4041595 <- tig#8, B=1171658 nt (start:690046, end:690025) A=5070776 nt (start:3371549, end:3371528) CALCULATED DISTANCE APART: -4041595 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#57 -> -3231864 <- tig#7, A=258385 nt (start:256054, end:256075) B=3534247 nt (start:3249533, end:3249512) CALCULATED DISTANCE APART: -3231864 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#423 -> -926237 <- tig#34, A=1276 nt (start:49, end:70) B=1705564 nt (start:945010, end:944989) CALCULATED DISTANCE APART: -926237 < -2000 Pairs unsatisfied in distance within a contig. Pair (CAAATCTCAACCGTTCAAGGC - GAACCTTGAGTGTAGATGGCC) on contig 27 (1227811 nt) Astart:434610 Aend:434631 Bstart:450863 Bend:450842 CALCULATED DISTANCE APART: 16253 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#101 -> -2656718 <- tig#12, A=84691 nt (start:11150, end:11171) B=2766197 nt (start:2603177, end:2603156) CALCULATED DISTANCE APART: -2656718 < -2000 Pairs unsatisfied in distance within a contig. Pair (ACTCAAGAACATATAACTCCA - TCAATATCTTGGTTCCATTCT) on contig 1 (4853111 nt) Astart:346675 Aend:346696 Bstart:391952 Bend:391931 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig. Pair (ACGACGATTTTGCATTAGGAT - CAAGCATAGACTCTATTCTTG) on contig 25 (1290536 nt) Astart:990129 Aend:990108 Bstart:975595 Bend:975616 CALCULATED DISTANCE APART: 14534 Pairs unsatisfied in distance within a contig. Pair (TAATAAAAATATTTATTTTTA - GCTAGGGAAGTTATGGCTTTA) on contig 109 (66564 nt) Astart:5654 Aend:5633 Bstart:18 Bend:39 CALCULATED DISTANCE APART: 5636 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459359, end:459338) A=1345436 nt (start:26301, end:26280) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig. Pair (CAAATGGTGAAATTAGCGGAG - CAACGATTGTAACCTTCTCAA) on contig 2 (5014909 nt) Astart:1269476 Aend:1269497 Bstart:1284138 Bend:1284117 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282527, end:282548) B=2196 nt (start:708, end:687) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGGTTTCAATCAATAAACAAG - TTGAGGCAAGTTGAAGCAAAG) on contig 6 (6870868 nt) Astart:1138614 Aend:1138593 Bstart:1130159 Bend:1130180 CALCULATED DISTANCE APART: 8455 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#37 -> -738300 <- tig#r.53, A=853709 nt (start:108304, end:108325) B=354284 nt (start:341389, end:341410) CALCULATED DISTANCE APART: -738300 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#47 -> -466598 <- tig#91, A=471458 nt (start:510, end:531) B=101959 nt (start:15650, end:15629) CALCULATED DISTANCE APART: -466598 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#41 -> -193683 <- tig#r.31, A=667251 nt (start:483416, end:483437) B=976128 nt (start:946280, end:946301) CALCULATED DISTANCE APART: -193683 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.42 -> -1433157 <- tig#20, B=659641 nt (start:2298, end:2277) A=2328057 nt (start:1450859, end:1450838) CALCULATED DISTANCE APART: -1433157 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#63 -> -88275 <- tig#145, A=274372 nt (start:182876, end:182897) B=21756 nt (start:16779, end:16758) CALCULATED DISTANCE APART: -88275 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.42 -> -1433157 <- tig#20, B=659641 nt (start:2248, end:2227) A=2328057 nt (start:1450909, end:1450888) CALCULATED DISTANCE APART: -1433157 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730932, end:730953) B=3531543 nt (start:3200506, end:3200485) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CTTTTCAAGTGTTTGTCTTAA - ATTTTCAACTCATGGACAGGC) on contig 7 (3534247 nt) Astart:2255832 Aend:2255811 Bstart:2238947 Bend:2238926 Pairs unsatisfied in pairing logic within a contig. Pair (GTTCACTCGGAGCTCGTGGCT - TTCTTCTTATGGGCACTTGCG) on contig 15 (3712591 nt) Astart:1718448 Aend:1718469 Bstart:1729570 Bend:1729591 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#49 -> -1152645 <- tig#r.43, A=399963 nt (start:351806, end:351827) B=1235946 nt (start:111458, end:111479) CALCULATED DISTANCE APART: -1152645 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CTCTTTTTCTTGCTCTTTATA - GGTGGGATATATTGGACAAAA) on contig 19 (3531543 nt) Astart:3059986 Aend:3059965 Bstart:3048737 Bend:3048716 Pairs unsatisfied in distance within a contig. Pair (GAATCGACGTAGCAGGATGCC - AATTGGCATATTGATTACTGT) on contig 5 (3689108 nt) Astart:1170207 Aend:1170228 Bstart:1185342 Bend:1185321 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#9 -> -3369808 <- tig#22, A=3747885 nt (start:358263, end:358284) B=1636463 nt (start:186, end:165) CALCULATED DISTANCE APART: -3369808 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2261057, end:2261078) B=356404 nt (start:342167, end:342188) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.19 -> -4012474 <- tig#13, B=3531543 nt (start:1681562, end:1681541) A=2650694 nt (start:2350912, end:2350891) CALCULATED DISTANCE APART: -4012474 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -1168778 <- tig#384, A=5070776 nt (start:3882345, end:3882366) B=1359 nt (start:347, end:326) CALCULATED DISTANCE APART: -1168778 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#64 -> -195944 <- tig#109, B=211265 nt (start:815, end:836) A=66564 nt (start:5494, end:5473) CALCULATED DISTANCE APART: -195944 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.4 -> -1331685 <- tig#8, B=3837743 nt (start:442208, end:442187) A=5070776 nt (start:909477, end:909456) CALCULATED DISTANCE APART: -1331685 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GGAAACAACAAGATGTATATA - AACAGAGATTAGATAGCCAAA) on contig 19 (3531543 nt) Astart:3058893 Aend:3058872 Bstart:3049827 Bend:3049806 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.459 -> -147882 <- tig#53, B=1183 nt (start:76, end:55) A=354284 nt (start:167806, end:167785) CALCULATED DISTANCE APART: -147882 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#103 -> -259849 <- tig#r.48, A=211876 nt (start:14659, end:14680) B=487359 nt (start:404727, end:404748) CALCULATED DISTANCE APART: -259849 < -2000 Pairs unsatisfied in distance within a contig. Pair (GACTAGACAGTTCGAGACGAT - TTCTTGGTAGTAGTTGACCCT) on contig 1 (4853111 nt) Astart:346715 Aend:346736 Bstart:391992 Bend:391971 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#79 -> -614150 <- tig#r.2, A=136600 nt (start:76377, end:76398) B=5014909 nt (start:4440982, end:4441003) CALCULATED DISTANCE APART: -614150 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATATTCTATGGTCTCCAAATC - TGGTTTTAGTTGTTGTGTCCT) on contig 15 (3712591 nt) Astart:1717908 Aend:1717929 Bstart:1730110 Bend:1730131 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#19 -> -3620471 <- tig#r.54, A=3531543 nt (start:471656, end:471677) B=625914 nt (start:45330, end:45351) CALCULATED DISTANCE APART: -3620471 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.342 -> -153452 <- tig#9, B=1467 nt (start:1464, end:1443) A=3747885 nt (start:171988, end:171967) CALCULATED DISTANCE APART: -153452 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.257 -> -2902765 <- tig#8, B=1995 nt (start:1196, end:1175) A=5070776 nt (start:2921569, end:2921548) CALCULATED DISTANCE APART: -2902765 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135473, end:135494) B=15068 nt (start:2203, end:2224) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#114 -> -214226 <- tig#84, A=54818 nt (start:17413, end:17434) B=197079 nt (start:196821, end:196800) CALCULATED DISTANCE APART: -214226 < -2000 Pairs unsatisfied in distance within a contig. Pair (GATTCCAGATTCTTTAAAATG - CCTTCTTGTTTCACTCAGGTT) on contig 6 (6870868 nt) Astart:4411829 Aend:4411850 Bstart:4445783 Bend:4445762 CALCULATED DISTANCE APART: 33954 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#51 -> -486164 <- tig#r.46, A=875428 nt (start:750850, end:750871) B=577887 nt (start:196301, end:196322) CALCULATED DISTANCE APART: -486164 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459224, end:459203) A=1345436 nt (start:26436, end:26415) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -322558 <- tig#r.572, A=2650694 nt (start:2308515, end:2308536) B=1031 nt (start:652, end:673) CALCULATED DISTANCE APART: -322558 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135713, end:135734) B=15068 nt (start:1963, end:1984) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2995, end:3016) A=258385 nt (start:1531, end:1510) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#77 -> -122338 <- tig#99, B=160344 nt (start:24844, end:24865) A=88102 nt (start:6838, end:6817) CALCULATED DISTANCE APART: -122338 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#305 -> -2202335 <- tig#r.19, A=1638 nt (start:182, end:203) B=3531543 nt (start:1310664, end:1310685) CALCULATED DISTANCE APART: -2202335 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TGGTTATTTACAAAGTTTTAG - GTATAATAAATTCAAAATTGT) on contig 15 (3712591 nt) Astart:1718868 Aend:1718889 Bstart:1729150 Bend:1729171 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260652, end:2260673) B=356404 nt (start:342572, end:342593) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig. Pair (ACTTGGCTAGGAATTGGACTA - TTTTTTTGTTTTGTTTCAGAA) on contig 34 (1705564 nt) Astart:679674 Aend:679653 Bstart:664711 Bend:664732 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig. Pair (TGAAACAAGCACCTTGCTCTG - TTTTTATTTTCAGTTTTCAAT) on contig 5 (3689108 nt) Astart:1171837 Aend:1171858 Bstart:1186973 Bend:1186952 CALCULATED DISTANCE APART: 15136 Pairs unsatisfied in distance within a contig. Pair (TTGGATAGTGCTGGAGTTTCT - CAGAGACAAAATTTTCAAGAG) on contig 2 (5014909 nt) Astart:1268826 Aend:1268847 Bstart:1283488 Bend:1283467 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in pairing logic within a contig. Pair (CCATACAAAAAATAATAATAG - TCAATCTACCTAATGTCACAA) on contig 4 (3837743 nt) Astart:2358131 Aend:2358152 Bstart:2359931 Bend:2359952 Pairs unsatisfied in distance within a contig. Pair (CACAGAGAAAAAGAGCCATAG - GCACTCAAGTTTTGGATCTGG) on contig 29 (1463708 nt) Astart:122912 Aend:122891 Bstart:100845 Bend:100866 CALCULATED DISTANCE APART: 22067 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#120 -> -1341554 <- tig#29, B=44710 nt (start:43302, end:43323) A=1463708 nt (start:1360146, end:1360125) CALCULATED DISTANCE APART: -1341554 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -1168778 <- tig#384, A=5070776 nt (start:3883140, end:3883161) B=1359 nt (start:1142, end:1121) CALCULATED DISTANCE APART: -1168778 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33459, end:33438) A=855454 nt (start:18990, end:18969) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig. Pair (GTGAGGAGCATCCCCCTAAGC - AATCATGGTGTTGTGACAGTG) on contig 5 (3689108 nt) Astart:1169842 Aend:1169863 Bstart:1184977 Bend:1184956 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260272, end:2260293) B=356404 nt (start:342952, end:342973) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12316, end:12295) A=91302 nt (start:11877, end:11856) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3583 <- tig#26, B=1171658 nt (start:1171028, end:1171049) A=1332708 nt (start:22953, end:22932) CALCULATED DISTANCE APART: -3583 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728533, end:728554) A=1096 nt (start:618, end:597) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#34 -> -1107961 <- tig#79, A=1705564 nt (start:661441, end:661462) B=136600 nt (start:83838, end:83817) CALCULATED DISTANCE APART: -1107961 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#39 -> -500696 <- tig#r.30, A=736718 nt (start:679426, end:679447) B=1050452 nt (start:587048, end:587069) CALCULATED DISTANCE APART: -500696 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.257 -> -2902765 <- tig#8, B=1995 nt (start:1181, end:1160) A=5070776 nt (start:2921584, end:2921563) CALCULATED DISTANCE APART: -2902765 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#6 -> -3712398 <- tig#1, A=6870868 nt (start:5007557, end:5007578) B=4853111 nt (start:1869087, end:1869066) CALCULATED DISTANCE APART: -3712398 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#60 -> -164722 <- tig#92, B=232804 nt (start:136413, end:136434) A=101136 nt (start:88331, end:88310) CALCULATED DISTANCE APART: -164722 < -2000 Pairs unsatisfied in distance within a contig. Pair (AACTTATTATTAAATCGGCAG - GATTTCATATTTCTAAAGGTA) on contig 5 (3689108 nt) Astart:1169887 Aend:1169908 Bstart:1185022 Bend:1185001 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.34 -> -1237895 <- tig#41, B=1705564 nt (start:1210714, end:1210693) A=667251 nt (start:47181, end:47160) CALCULATED DISTANCE APART: -1237895 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12481, end:12460) A=91302 nt (start:11712, end:11691) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -8508953 <- tig#6, A=5070776 nt (start:579343, end:579364) B=6870868 nt (start:4037520, end:4037499) CALCULATED DISTANCE APART: -8508953 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#118 -> -33564 <- tig#97, B=66247 nt (start:38297, end:38318) A=91050 nt (start:25614, end:25593) CALCULATED DISTANCE APART: -33564 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GGTAGAGAAAGTGAATGAGCC - TTTGTTTTTTCTCTGAATAAC) on contig 19 (3531543 nt) Astart:3059028 Aend:3059007 Bstart:3049692 Bend:3049671 Pairs unsatisfied in pairing logic within a contig. Pair (ACCATAGTAACTGTTTTCTTG - GACATGGCCCTAGTAATTTTT) on contig 19 (3531543 nt) Astart:3058218 Aend:3058197 Bstart:3050502 Bend:3050481 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -4201 <- tig#r.96, A=262460 nt (start:244331, end:244352) B=91302 nt (start:85230, end:85251) CALCULATED DISTANCE APART: -4201 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TCGATAGATTTACCATAATGC - TAGGTAATTGAGAAATCATTT) on contig 15 (3712591 nt) Astart:1717668 Aend:1717689 Bstart:1730350 Bend:1730371 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#54 -> -868447 <- tig#30, A=625914 nt (start:324417, end:324438) B=1050452 nt (start:586950, end:586929) CALCULATED DISTANCE APART: -868447 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#46 -> -82984 <- tig#r.53, A=577887 nt (start:566660, end:566681) B=354284 nt (start:262527, end:262548) CALCULATED DISTANCE APART: -82984 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#34 -> -3900848 <- tig#r.11, A=1705564 nt (start:54492, end:54513) B=4628067 nt (start:2358291, end:2358312) CALCULATED DISTANCE APART: -3900848 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TAAAGTGAAATGTGTTTCTTT - AATGCCAATTAAGCTCCTTGA) on contig 19 (3531543 nt) Astart:3059591 Aend:3059570 Bstart:3049132 Bend:3049111 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#14 -> -765455 <- tig#43, B=2271162 nt (start:2083069, end:2083090) A=1235946 nt (start:597362, end:597341) CALCULATED DISTANCE APART: -765455 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.93 -> -138251 <- tig#48, B=152036 nt (start:144224, end:144203) A=487359 nt (start:14027, end:14006) CALCULATED DISTANCE APART: -138251 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAAGCGTAGCCAGCTAATAGA - TCTGATAAACTGATACCACCA) on contig 27 (1227811 nt) Astart:434660 Aend:434681 Bstart:450913 Bend:450892 CALCULATED DISTANCE APART: 16253 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#114 -> -99720 <- tig#95, B=54818 nt (start:27535, end:27556) A=92653 nt (start:92437, end:92416) CALCULATED DISTANCE APART: -99720 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTTATGTGAGATTGGTGTGTA - TACTAGCTAGAATTAATAGAA) on contig 5 (3689108 nt) Astart:1178282 Aend:1178261 Bstart:1163148 Bend:1163169 CALCULATED DISTANCE APART: 15134 Pairs unsatisfied in distance within a contig. Pair (AAGGCTTGAAACCCTCAATGA - ACTTGCTCATCAATTCCCTGC) on contig 2 (5014909 nt) Astart:1269436 Aend:1269457 Bstart:1284098 Bend:1284077 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig. Pair (GGATTACCCAAAGTTCTCAAA - ATTTTATATCAATTCTTTGTT) on contig 13 (2650694 nt) Astart:1947130 Aend:1947151 Bstart:1962778 Bend:1962757 CALCULATED DISTANCE APART: 15648 Pairs unsatisfied in pairing logic within a contig. Pair (AGATTTTCGTAAATGCGAATG - GTGCGTATAAAAGTTGTGAGT) on contig 15 (3712591 nt) Astart:1717488 Aend:1717509 Bstart:1730530 Bend:1730551 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728293, end:728314) A=1096 nt (start:378, end:357) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219311, end:4219290) A=2598 nt (start:2310, end:2289) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#305 -> -2202335 <- tig#r.19, A=1638 nt (start:112, end:133) B=3531543 nt (start:1310734, end:1310755) CALCULATED DISTANCE APART: -2202335 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -621133 <- tig#r.66, A=2766197 nt (start:2129338, end:2129359) B=201913 nt (start:197639, end:197660) CALCULATED DISTANCE APART: -621133 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -4201 <- tig#r.96, A=262460 nt (start:244361, end:244382) B=91302 nt (start:85200, end:85221) CALCULATED DISTANCE APART: -4201 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#19 -> -1649636 <- tig#31, A=3531543 nt (start:1878702, end:1878723) B=976128 nt (start:16795, end:16774) CALCULATED DISTANCE APART: -1649636 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GGTATGAAGCGTTTGAGAGGA - CAAAGACACACACAATTTAAC) on contig 3 (3889482 nt) Astart:2809028 Aend:2809007 Bstart:2767806 Bend:2767785 Pairs unsatisfied in pairing logic within a contig. Pair (TTTAAATTATACAAAATCTAG - AATATATTGTAAAGAAAACTT) on contig 19 (3531543 nt) Astart:3060411 Aend:3060390 Bstart:3048312 Bend:3048291 Pairs unsatisfied in pairing logic within a contig. Pair (TAGTAAAATATGATGTAAAAT - TTATATATACTCGGCGATGAG) on contig 19 (3531543 nt) Astart:3060376 Aend:3060355 Bstart:3048347 Bend:3048326 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.12 -> -2706219 <- tig#31, B=2766197 nt (start:2675128, end:2675107) A=976128 nt (start:51091, end:51070) CALCULATED DISTANCE APART: -2706219 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CACAACAGAACACAATAAAGA - TCTTAAAATATTATTTTTTTT) on contig 53 (354284 nt) Astart:242925 Aend:242904 Bstart:340184 Bend:340205 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282127, end:282148) B=2196 nt (start:308, end:287) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12611, end:12590) A=91302 nt (start:11582, end:11561) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33544, end:33523) A=855454 nt (start:18905, end:18884) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig. Pair (GTGAAACTGTAAGATATGATG - ATTTCTTTCAAAGTATTTCTC) on contig 5 (3689108 nt) Astart:1169812 Aend:1169833 Bstart:1184947 Bend:1184926 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260177, end:2260198) B=356404 nt (start:343047, end:343068) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#129 -> -29788 <- tig#167, B=39603 nt (start:29, end:50) A=25236 nt (start:10214, end:10193) CALCULATED DISTANCE APART: -29788 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.132 -> -24881 <- tig#167, B=34686 nt (start:34667, end:34646) A=25236 nt (start:10214, end:10193) CALCULATED DISTANCE APART: -24881 < -2000 Pairs unsatisfied in distance within a contig. Pair (AATCAATAATGAAAAACACTT - CTTGTTGCATGGCAGTAATAA) on contig 37 (853709 nt) Astart:838424 Aend:838403 Bstart:822919 Bend:822940 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#11 -> -4878197 <- tig#29, A=4628067 nt (start:684604, end:684625) B=1463708 nt (start:954734, end:954713) CALCULATED DISTANCE APART: -4878197 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -7514397 <- tig#2, B=4628067 nt (start:4149957, end:4149936) A=5014909 nt (start:3384440, end:3384419) CALCULATED DISTANCE APART: -7514397 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#119 -> -7707 <- tig#r.49, A=46878 nt (start:32050, end:32071) B=399963 nt (start:387084, end:387105) CALCULATED DISTANCE APART: -7707 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#54 -> -612815 <- tig#49, B=625914 nt (start:36643, end:36664) A=399963 nt (start:43544, end:43523) CALCULATED DISTANCE APART: -612815 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TCGTTGGAAAGCATGGATCCG - ATCCATGTCAGCCCACGCATG) on contig 49 (399963 nt) Astart:43544 Aend:43523 Bstart:43768 Bend:43789 Pairs unsatisfied in distance within a contig. Pair (ATGGTTTAAAGTTTCGGACAA - ATAGAGATACTAAGTTTCTTA) on contig 30 (1050452 nt) Astart:649619 Aend:649640 Bstart:665385 Bend:665364 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:458654, end:458633) A=1345436 nt (start:27006, end:26985) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ACAAGCCAACGTCTAGCAAAC - ACCGATTTCTAGATCAATCTT) on contig 15 (3712591 nt) Astart:1716623 Aend:1716644 Bstart:1731395 Bend:1731416 Pairs unsatisfied in distance within a contig. Pair (TTCAGATGGTATTTGGGAGAA - ATACGGTCTAGTGTTTCTGAG) on contig 5 (3689108 nt) Astart:1169867 Aend:1169888 Bstart:1185002 Bend:1184981 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#13 -> -3265601 <- tig#5, B=2650694 nt (start:2066840, end:2066861) A=3689108 nt (start:2701747, end:2701726) CALCULATED DISTANCE APART: -3265601 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282757, end:282778) B=2196 nt (start:938, end:917) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.409 -> -1019852 <- tig#23, B=1303 nt (start:606, end:585) A=1345436 nt (start:1039246, end:1039225) CALCULATED DISTANCE APART: -1019852 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CTTGAAGAGGATGGTAACTGG - CCAGACCAAGGTGGAAGGTCT) on contig 4 (3837743 nt) Astart:2357891 Aend:2357912 Bstart:2360171 Bend:2360192 Pairs unsatisfied in distance within a contig. Pair (TTGTTATCAAAAGGAACACAA - TTATTTATTTCCTCATTTCTC) on contig 5 (3689108 nt) Astart:1169572 Aend:1169593 Bstart:1184707 Bend:1184686 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#79 -> -614150 <- tig#r.2, A=136600 nt (start:76372, end:76393) B=5014909 nt (start:4440987, end:4441008) CALCULATED DISTANCE APART: -614150 < -2000 Pairs unsatisfied in distance within a contig. Pair (ACAGTTTTACATATAATTCGT - TTCGTCAATGCGTTTTGAAAG) on contig 37 (853709 nt) Astart:838754 Aend:838733 Bstart:823249 Bend:823270 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in pairing logic within a contig. Pair (ATAAACTCATCCAGATGGATT - AGAACAACTTATTGAGACAAA) on contig 4 (3837743 nt) Astart:2358406 Aend:2358427 Bstart:2359656 Bend:2359677 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#9 -> -6907529 <- tig#r.5, A=3747885 nt (start:149284, end:149305) B=3689108 nt (start:360180, end:360201) CALCULATED DISTANCE APART: -6907529 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#9 -> -6907531 <- tig#r.5, A=3747885 nt (start:149284, end:149305) B=3689108 nt (start:360178, end:360199) CALCULATED DISTANCE APART: -6907531 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#4 -> -5277308 <- tig#6, B=3837743 nt (start:117855, end:117876) A=6870868 nt (start:1577420, end:1577399) CALCULATED DISTANCE APART: -5277308 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136498, end:136519) B=15068 nt (start:1178, end:1199) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#128 -> -1108146 <- tig#r.38, A=40011 nt (start:13800, end:13821) B=1143067 nt (start:41132, end:41153) CALCULATED DISTANCE APART: -1108146 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2190, end:2211) A=258385 nt (start:726, end:705) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#265 -> -3126344 <- tig#4, A=1946 nt (start:1546, end:1567) B=3837743 nt (start:3145944, end:3145923) CALCULATED DISTANCE APART: -3126344 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TGCATAATTACGAACTTAGAA - AACTCAACCATTCTGAAATCT) on contig 19 (3531543 nt) Astart:3059258 Aend:3059237 Bstart:3049462 Bend:3049441 Pairs unsatisfied in pairing logic within a contig. Pair (GACAACTATTATCGATTATGA - CGATATGTGAGCTCACTCGTC) on contig 7 (3534247 nt) Astart:2256002 Aend:2255981 Bstart:2238781 Bend:2238760 Pairs unsatisfied in distance within a contig. Pair (TCAAAAAGAATTATAAATATT - CCCAACACACGGAACAATCGA) on contig 75 (373953 nt) Astart:275790 Aend:275811 Bstart:300506 Bend:300485 CALCULATED DISTANCE APART: 24716 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260597, end:2260618) B=356404 nt (start:342627, end:342648) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -621133 <- tig#r.66, A=2766197 nt (start:2129258, end:2129279) B=201913 nt (start:197719, end:197740) CALCULATED DISTANCE APART: -621133 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATCATGAAGTTGGTTTTTAGT - GCAAACAATGTGAGTCTGAAG) on contig 6 (6870868 nt) Astart:1139154 Aend:1139133 Bstart:1130671 Bend:1130692 CALCULATED DISTANCE APART: 8483 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282897, end:282918) B=2196 nt (start:1078, end:1057) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#39 -> -2984839 <- tig#12, B=736718 nt (start:457348, end:457369) A=2766197 nt (start:2725469, end:2725448) CALCULATED DISTANCE APART: -2984839 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTCAACGATTTCTTCAAAACC - TTTGTGGAGTAGATTATTTTT) on contig 19 (3531543 nt) Astart:1348189 Aend:1348168 Bstart:1311044 Bend:1311065 CALCULATED DISTANCE APART: 37145 Pairs unsatisfied in distance within a contig. Pair (TGTATTTGGGAAACGAGCCAA - CCATTGAGAGAGGAAAGAGCA) on contig 2 (5014909 nt) Astart:1268671 Aend:1268692 Bstart:1283333 Bend:1283312 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -621133 <- tig#r.66, A=2766197 nt (start:2129493, end:2129514) B=201913 nt (start:197484, end:197505) CALCULATED DISTANCE APART: -621133 < -2000 Pairs unsatisfied in distance within a contig. Pair (GGATGAATTCATTTCCAGTCA - TTGCCTCTAATCATTTCCAGC) on contig 1 (4853111 nt) Astart:346190 Aend:346211 Bstart:391467 Bend:391446 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig. Pair (TCATAAAGAAGACAAAGGCTC - CCCTTCTCCAGAACCACTCAC) on contig 14 (2271162 nt) Astart:1978679 Aend:1978700 Bstart:2002849 Bend:2002828 CALCULATED DISTANCE APART: 24170 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459144, end:459123) A=1345436 nt (start:26516, end:26495) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282487, end:282508) B=2196 nt (start:668, end:647) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTTCTTGAAACATCAAAGTGT - TATAGTAATCTAGATCAATAC) on contig 5 (3689108 nt) Astart:1178362 Aend:1178341 Bstart:1163228 Bend:1163249 CALCULATED DISTANCE APART: 15134 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#305 -> -2202335 <- tig#r.19, A=1638 nt (start:52, end:73) B=3531543 nt (start:1310794, end:1310815) CALCULATED DISTANCE APART: -2202335 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730182, end:730203) B=3531543 nt (start:3199756, end:3199735) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185819, end:4185798) A=3712591 nt (start:742, end:721) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ACATACTATTGTATACTGGAA - ACAAAAGAAAACACTAAAGTG) on contig 4 (3837743 nt) Astart:2357976 Aend:2357997 Bstart:2360086 Bend:2360107 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#36 -> -741896 <- tig#37, A=855454 nt (start:790670, end:790691) B=853709 nt (start:697112, end:697091) CALCULATED DISTANCE APART: -741896 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#127 -> -717436 <- tig#r.33, A=80830 nt (start:20196, end:20217) B=1290487 nt (start:613685, end:613706) CALCULATED DISTANCE APART: -717436 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.17 -> -4235143 <- tig#3, B=1959065 nt (start:1446495, end:1446474) A=3889482 nt (start:2808648, end:2808627) CALCULATED DISTANCE APART: -4235143 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17390, end:17369) A=1227811 nt (start:6425, end:6404) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259212, end:2259233) B=356404 nt (start:344012, end:344033) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GATATAGAAAGATATTTAATT - ATCTCACACGTAAAACGTTTA) on contig 21 (1811326 nt) Astart:154695 Aend:154674 Bstart:261445 Bend:261424 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.65 -> -937509 <- tig#16, B=286124 nt (start:228794, end:228773) A=2098954 nt (start:728715, end:728694) CALCULATED DISTANCE APART: -937509 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GAAGAGCTGATGATTTGCTGA - GTTACAACAAATAGAACCATT) on contig 15 (3712591 nt) Astart:1718598 Aend:1718619 Bstart:1729420 Bend:1729441 Pairs unsatisfied in pairing logic within a contig. Pair (AGCTTACACTCCCGGCCAGGT - CTCATGTATGTTTTGTTCCGC) on contig 6 (6870868 nt) Astart:2439983 Aend:2440004 Bstart:2446710 Bend:2446731 Pairs unsatisfied in distance within a contig. Pair (TCTATGTCTATAAATTAATAA - GCTTTAGCTGGTGAACTCCCT) on contig 109 (66564 nt) Astart:5669 Aend:5648 Bstart:33 Bend:54 CALCULATED DISTANCE APART: 5636 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#11 -> -3778320 <- tig#16, B=4628067 nt (start:2873315, end:2873336) A=2098954 nt (start:2043568, end:2043547) CALCULATED DISTANCE APART: -3778320 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#9 -> -3374754 <- tig#12, A=3747885 nt (start:435643, end:435664) B=2766197 nt (start:82512, end:82491) CALCULATED DISTANCE APART: -3374754 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136233, end:136254) B=15068 nt (start:1443, end:1464) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.4 -> -1331685 <- tig#8, B=3837743 nt (start:442243, end:442222) A=5070776 nt (start:909442, end:909421) CALCULATED DISTANCE APART: -1331685 < -2000 Pairs unsatisfied in distance within a contig. Pair (GTAAGTGATAGAGCAGAACAA - CTTAGGTAGGATGAGTCCATT) on contig 41 (667251 nt) Astart:88563 Aend:88542 Bstart:75883 Bend:75904 CALCULATED DISTANCE APART: 12680 Pairs unsatisfied in distance within a contig. Pair (AAGCTGTCACGCTTATCATTC - TTAATAATTTAATTGAGGATT) on contig 5 (3689108 nt) Astart:1171732 Aend:1171753 Bstart:1186868 Bend:1186847 CALCULATED DISTANCE APART: 15136 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#19 -> -7864876 <- tig#r.2, A=3531543 nt (start:471321, end:471342) B=5014909 nt (start:190255, end:190276) CALCULATED DISTANCE APART: -7864876 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259397, end:2259418) B=356404 nt (start:343827, end:343848) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig. Pair (GAATAAAAGGTAGAATAAGTA - AAGCATAATATTAGACCAATA) on contig 13 (2650694 nt) Astart:1947310 Aend:1947331 Bstart:1962958 Bend:1962937 CALCULATED DISTANCE APART: 15648 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#75 -> -162900 <- tig#360, B=373953 nt (start:192083, end:192104) A=1423 nt (start:1030, end:1009) CALCULATED DISTANCE APART: -162900 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12556, end:12535) A=91302 nt (start:11637, end:11616) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATGTAATATCCATAAACACGT - AAATTAGCAATTTCCCTAACT) on contig 1 (4853111 nt) Astart:345726 Aend:345747 Bstart:390992 Bend:390971 CALCULATED DISTANCE APART: 45266 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282412, end:282433) B=2196 nt (start:593, end:572) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459959, end:459938) A=1345436 nt (start:25701, end:25680) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#60 -> -2598812 <- tig#19, B=232804 nt (start:136618, end:136639) A=3531543 nt (start:2522626, end:2522605) CALCULATED DISTANCE APART: -2598812 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#19 -> -3098757 <- tig#47, A=3531543 nt (start:470146, end:470167) B=471458 nt (start:57360, end:57339) CALCULATED DISTANCE APART: -3098757 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#11 -> -4257877 <- tig#r.48, A=4628067 nt (start:450502, end:450523) B=487359 nt (start:387047, end:387068) CALCULATED DISTANCE APART: -4257877 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3583 <- tig#26, B=1171658 nt (start:1171438, end:1171459) A=1332708 nt (start:23363, end:23342) CALCULATED DISTANCE APART: -3583 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#81 -> -2930095 <- tig#r.7, A=258617 nt (start:241364, end:241385) B=3534247 nt (start:601405, end:601426) CALCULATED DISTANCE APART: -2930095 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33814, end:33793) A=855454 nt (start:18635, end:18614) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12916, end:12895) A=91302 nt (start:11277, end:11256) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.48 -> -1346217 <- tig#32, B=487359 nt (start:459730, end:459709) A=972151 nt (start:906487, end:906466) CALCULATED DISTANCE APART: -1346217 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135063, end:135084) B=15068 nt (start:2613, end:2634) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#47 -> -583213 <- tig#r.69, A=471458 nt (start:9873, end:9894) B=186132 nt (start:44504, end:44525) CALCULATED DISTANCE APART: -583213 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:458674, end:458653) A=1345436 nt (start:26986, end:26965) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#43 -> -1055899 <- tig#67, B=1235946 nt (start:224926, end:224947) A=197815 nt (start:64879, end:64858) CALCULATED DISTANCE APART: -1055899 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.29 -> -1051406 <- tig#12, B=1463708 nt (start:953459, end:953438) A=2766197 nt (start:117947, end:117926) CALCULATED DISTANCE APART: -1051406 < -2000 Pairs unsatisfied in distance within a contig. Pair (ACATGATCATGAAGTTGGTTT - CAATGTGAGTCTGAAGTTCCA) on contig 6 (6870868 nt) Astart:1139159 Aend:1139138 Bstart:1130676 Bend:1130697 CALCULATED DISTANCE APART: 8483 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728793, end:728814) A=1096 nt (start:878, end:857) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082517, end:2082538) B=976128 nt (start:961005, end:961026) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#175 -> -2741574 <- tig#3, B=11120 nt (start:2814, end:2835) A=3889482 nt (start:2753268, end:2753247) CALCULATED DISTANCE APART: -2741574 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082522, end:2082543) B=976128 nt (start:961000, end:961021) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -1335675 <- tig#4, B=3747885 nt (start:2858772, end:2858793) A=3837743 nt (start:466562, end:466541) CALCULATED DISTANCE APART: -1335675 < -2000 Pairs unsatisfied in distance within a contig. Pair (ACCTAAAAAAACCAATCAATC - CATGTTTTAGAGCCGGAATTC) on contig 5 (3689108 nt) Astart:1178382 Aend:1178361 Bstart:1163248 Bend:1163269 CALCULATED DISTANCE APART: 15134 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10563, end:10542) A=2766197 nt (start:2151000, end:2150979) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260122, end:2260143) B=356404 nt (start:343102, end:343123) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#7 -> -3551426 <- tig#r.10, A=3534247 nt (start:2104508, end:2104529) B=3047199 nt (start:905512, end:905533) CALCULATED DISTANCE APART: -3551426 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135753, end:135774) B=15068 nt (start:1923, end:1944) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCGAAAACTTGTAATGTCAAA - CTAACTTGCGCCTTGGCACAA) on contig 10 (3047199 nt) Astart:790024 Aend:790003 Bstart:766286 Bend:766307 CALCULATED DISTANCE APART: 23738 Pairs unsatisfied in distance within a contig. Pair (TGTTGACCACATCTAGCTGGA - CCAAAATCTCTTTCTTCTTTA) on contig 34 (1705564 nt) Astart:679354 Aend:679333 Bstart:664391 Bend:664412 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219436, end:4219415) A=2598 nt (start:2185, end:2164) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730042, end:730063) B=3531543 nt (start:3199616, end:3199595) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#52 -> -355614 <- tig#3, B=356404 nt (start:102, end:123) A=3889482 nt (start:19312, end:19291) CALCULATED DISTANCE APART: -355614 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#26 -> -90650 <- tig#95, B=1332708 nt (start:1310603, end:1310624) A=92653 nt (start:88545, end:88524) CALCULATED DISTANCE APART: -90650 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16380, end:16359) A=1227811 nt (start:7435, end:7414) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTCTTTAACATCAACTAGATT - AGCAAGGGTAAAAAAAAAAAA) on contig 19 (3531543 nt) Astart:3058263 Aend:3058242 Bstart:3050457 Bend:3050436 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728518, end:728539) A=1096 nt (start:603, end:582) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig. Pair (GTAAAGTTTAATTAGGAAAAT - TTGTTTAAGAAATAATGAAAA) on contig 37 (853709 nt) Astart:838354 Aend:838333 Bstart:822849 Bend:822870 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460974, end:460953) A=1345436 nt (start:24686, end:24665) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#129 -> -1659892 <- tig#34, A=39603 nt (start:39013, end:39034) B=1705564 nt (start:1679302, end:1679281) CALCULATED DISTANCE APART: -1659892 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10653, end:10632) A=2766197 nt (start:2150910, end:2150889) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#36 -> -64204 <- tig#94, A=855454 nt (start:790185, end:790206) B=93323 nt (start:18935, end:18914) CALCULATED DISTANCE APART: -64204 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#67 -> -163343 <- tig#51, B=197815 nt (start:180340, end:180361) A=875428 nt (start:165868, end:165847) CALCULATED DISTANCE APART: -163343 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#175 -> -2741574 <- tig#3, B=11120 nt (start:2804, end:2825) A=3889482 nt (start:2753258, end:2753237) CALCULATED DISTANCE APART: -2741574 < -2000 Pairs unsatisfied in distance within a contig. Pair (GAATTGTTTCTATTGGGCCTC - CGTCGACAATTCAATATCTAA) on contig 15 (3712591 nt) Astart:2103266 Aend:2103245 Bstart:2056452 Bend:2056473 CALCULATED DISTANCE APART: 46814 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.7 -> -5702685 <- tig#12, B=3534247 nt (start:3500307, end:3500286) A=2766197 nt (start:2222378, end:2222357) CALCULATED DISTANCE APART: -5702685 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#22 -> -1615678 <- tig#20, B=1636463 nt (start:11016, end:11037) A=2328057 nt (start:10231, end:10210) CALCULATED DISTANCE APART: -1615678 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#590 -> -1631326 <- tig#r.34, A=1018 nt (start:562, end:583) B=1705564 nt (start:54694, end:54715) CALCULATED DISTANCE APART: -1631326 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.47 -> -199625 <- tig#2, B=471458 nt (start:121569, end:121548) A=5014909 nt (start:98056, end:98035) CALCULATED DISTANCE APART: -199625 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GAACAAAGACAGATCCTCAAT - TTTGAGCTTTAATTCATCAAT) on contig 53 (354284 nt) Astart:243009 Aend:242988 Bstart:340269 Bend:340290 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.155 -> -75138 <- tig#46, B=18420 nt (start:15826, end:15805) A=577887 nt (start:79312, end:79291) CALCULATED DISTANCE APART: -75138 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTCAAATGCACACACAAGGAA - ACCGTATCATTCAAACAATAG) on contig 6 (6870868 nt) Astart:1138134 Aend:1138113 Bstart:1129707 Bend:1129728 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in pairing logic within a contig. Pair (TCCGGCGTATAGGCCCTTGGA - TTTATCATTTTTCATTTGTAT) on contig 15 (3712591 nt) Astart:1717643 Aend:1717664 Bstart:1730375 Bend:1730396 Pairs unsatisfied in distance within a contig. Pair (AGAGGACGAACGAGCGGGAAA - AACAGAGAACCTGGATATAAG) on contig 46 (577887 nt) Astart:183260 Aend:183281 Bstart:200710 Bend:200689 CALCULATED DISTANCE APART: 17450 Pairs unsatisfied in distance within a contig. Pair (TTGGTTCAAAAACTTACAACT - CGGTAAGTGAATAAGGGAAGA) on contig 41 (667251 nt) Astart:88098 Aend:88077 Bstart:75418 Bend:75439 CALCULATED DISTANCE APART: 12680 Pairs unsatisfied in distance within a contig. Pair (GATTTCATGATTACTCGGGTT - GTTTCTGGCAAAGACGTTAAT) on contig 2 (5014909 nt) Astart:1268991 Aend:1269012 Bstart:1283653 Bend:1283632 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in pairing logic within a contig. Pair (TAACATCAACTAGATTGCGTT - AAGGCAGCAAGGGTAAAAAAA) on contig 19 (3531543 nt) Astart:3058258 Aend:3058237 Bstart:3050462 Bend:3050441 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#9 -> -6907516 <- tig#r.5, A=3747885 nt (start:149293, end:149314) B=3689108 nt (start:360184, end:360205) CALCULATED DISTANCE APART: -6907516 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTTGTTTCAATGTGATTTATT - TCACAAAAAAAAGTTATCAGA) on contig 19 (3531543 nt) Astart:3058558 Aend:3058537 Bstart:3050162 Bend:3050141 Pairs unsatisfied in pairing logic within a contig. Pair (CTTTGAGGTGGAACAAATTTC - ACTTAGACCAAATAAGTTGAC) on contig 14 (2271162 nt) Astart:658496 Aend:658475 Bstart:495415 Bend:495394 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#38 -> -1000423 <- tig#78, B=1143067 nt (start:252865, end:252886) A=184063 nt (start:130221, end:130200) CALCULATED DISTANCE APART: -1000423 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#11 -> -3815667 <- tig#56, B=4628067 nt (start:890917, end:890938) A=262460 nt (start:98517, end:98496) CALCULATED DISTANCE APART: -3815667 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10253, end:10232) A=2766197 nt (start:2151310, end:2151289) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAGGAACAGAGAACTCTGTAA - GAACTAGCGTCTTTGACCGTA) on contig 6 (6870868 nt) Astart:1138119 Aend:1138098 Bstart:1129692 Bend:1129713 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in pairing logic within a contig. Pair (AATGATACTTCAAAAGATATA - ATATTATTAGTTTGATTCGAA) on contig 19 (3531543 nt) Astart:3059223 Aend:3059202 Bstart:3049497 Bend:3049476 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:134818, end:134839) B=15068 nt (start:2858, end:2879) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#57 -> -4506482 <- tig#r.11, A=258385 nt (start:255841, end:255862) B=4628067 nt (start:104129, end:104150) CALCULATED DISTANCE APART: -4506482 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGATAGGAAAGACATTTTCTT - GGAGGCATTGGTTAGTGGGTT) on contig 30 (1050452 nt) Astart:648509 Aend:648530 Bstart:673543 Bend:673522 CALCULATED DISTANCE APART: 25034 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#47 -> -583213 <- tig#r.69, A=471458 nt (start:9938, end:9959) B=186132 nt (start:44439, end:44460) CALCULATED DISTANCE APART: -583213 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GACAGTCCAAGGTTCTCGGTG - ATGTCCAAATTGGCATGGTGT) on contig 48 (487359 nt) Astart:38437 Aend:38458 Bstart:385537 Bend:385558 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460044, end:460023) A=1345436 nt (start:25616, end:25595) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -1168778 <- tig#384, A=5070776 nt (start:3883060, end:3883081) B=1359 nt (start:1062, end:1041) CALCULATED DISTANCE APART: -1168778 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33974, end:33953) A=855454 nt (start:18475, end:18454) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260907, end:2260928) B=356404 nt (start:342317, end:342338) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136668, end:136689) B=15068 nt (start:1008, end:1029) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig. Pair (GTTTATGAACTCTTTTTCTAT - AACAACATAAATTATATTCAA) on contig 13 (2650694 nt) Astart:2350807 Aend:2350786 Bstart:2335869 Bend:2335890 CALCULATED DISTANCE APART: 14938 Pairs unsatisfied in pairing logic within a contig. Pair (GTTATATGGTCACCAATCACC - GGATATTTCAGTTACCCAGCG) on contig 19 (3531543 nt) Astart:3058308 Aend:3058287 Bstart:3050412 Bend:3050391 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#119 -> -7707 <- tig#r.49, A=46878 nt (start:31930, end:31951) B=399963 nt (start:387204, end:387225) CALCULATED DISTANCE APART: -7707 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16375, end:16354) A=1227811 nt (start:7440, end:7419) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATTATGTTCGTCAGGTGTCGG - GCCGACTGCCTAATGAAATCA) on contig 19 (3531543 nt) Astart:3058663 Aend:3058642 Bstart:3050057 Bend:3050036 Pairs unsatisfied in distance within a contig. Pair (ATTTTGACAAAATATTTGCCG - AAATTGTACGAACGTCTTAGT) on contig 37 (853709 nt) Astart:838794 Aend:838773 Bstart:823289 Bend:823310 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728073, end:728094) A=1096 nt (start:158, end:137) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#22 -> -6369340 <- tig#6, B=1636463 nt (start:14752, end:14773) A=6870868 nt (start:4767629, end:4767608) CALCULATED DISTANCE APART: -6369340 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#31 -> -921133 <- tig#r.134, A=976128 nt (start:42154, end:42175) B=33262 nt (start:26103, end:26124) CALCULATED DISTANCE APART: -921133 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#6 -> -40178 <- tig#91, A=6870868 nt (start:6827080, end:6827101) B=101959 nt (start:16390, end:16369) CALCULATED DISTANCE APART: -40178 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.25 -> -1129234 <- tig#46, B=1290536 nt (start:1135530, end:1135509) A=577887 nt (start:13704, end:13683) CALCULATED DISTANCE APART: -1129234 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#34 -> -1107957 <- tig#79, A=1705564 nt (start:661626, end:661647) B=136600 nt (start:84019, end:83998) CALCULATED DISTANCE APART: -1107957 < -2000 Pairs unsatisfied in distance within a contig. Pair (CACTATCTCTTATTTATTGTG - AGCAGAAACTTAACAAGAGAC) on contig 30 (1050452 nt) Astart:650334 Aend:650355 Bstart:666100 Bend:666079 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in distance within a contig. Pair (CTCGAGGATATAATTGGAACG - AGAAAATATTGATCTAAAATC) on contig 2 (5014909 nt) Astart:1269281 Aend:1269302 Bstart:1283943 Bend:1283922 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459869, end:459848) A=1345436 nt (start:25791, end:25770) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ACTTATGCTGAGAAGTGATTG - AAAAAAAAAATAAAGCAAAGT) on contig 7 (3534247 nt) Astart:2255547 Aend:2255526 Bstart:2239235 Bend:2239214 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.125 -> -63259 <- tig#102, B=54013 nt (start:10129, end:10108) A=83426 nt (start:73130, end:73109) CALCULATED DISTANCE APART: -63259 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#37 -> -1821163 <- tig#25, A=853709 nt (start:114361, end:114382) B=1290536 nt (start:1101815, end:1101794) CALCULATED DISTANCE APART: -1821163 < -2000 Pairs unsatisfied in distance within a contig. Pair (GGAGCGATCGAAAGCGTGAGA - AAAGAAGCAAGAAAGCTCAGT) on contig 15 (3712591 nt) Astart:3352517 Aend:3352538 Bstart:3377503 Bend:3377482 CALCULATED DISTANCE APART: 24986 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#57 -> -4506482 <- tig#r.11, A=258385 nt (start:255911, end:255932) B=4628067 nt (start:104059, end:104080) CALCULATED DISTANCE APART: -4506482 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.133 -> -306549 <- tig#53, B=34073 nt (start:749, end:728) A=354284 nt (start:325800, end:325779) CALCULATED DISTANCE APART: -306549 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -3661461 <- tig#r.3, A=262460 nt (start:68615, end:68636) B=3889482 nt (start:401866, end:401887) CALCULATED DISTANCE APART: -3661461 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TAAAATTTAAATTATACAAAA - ATTGTAAAGAAAACTTTGTAC) on contig 19 (3531543 nt) Astart:3060416 Aend:3060395 Bstart:3048307 Bend:3048286 Pairs unsatisfied in distance within a contig. Pair (TATGATGCTTGTGAGCTCTTC - ATGATTGGTAATTTTTTACAG) on contig 5 (3689108 nt) Astart:1170032 Aend:1170053 Bstart:1185167 Bend:1185146 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -40662 <- tig#443, A=736718 nt (start:676651, end:676672) B=1213 nt (start:595, end:574) CALCULATED DISTANCE APART: -40662 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12136, end:12115) A=91302 nt (start:12057, end:12036) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#3 -> -3618470 <- tig#27, B=3889482 nt (start:316514, end:316535) A=1227811 nt (start:65502, end:65481) CALCULATED DISTANCE APART: -3618470 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GTCACGCAGGTAAGGCTTTTT - ATTCAATGTTTATGTGAATCT) on contig 15 (3712591 nt) Astart:1717338 Aend:1717359 Bstart:1730680 Bend:1730701 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#2 -> -6085454 <- tig#25, A=5014909 nt (start:11530, end:11551) B=1290536 nt (start:1102075, end:1102054) CALCULATED DISTANCE APART: -6085454 < -2000 Pairs unsatisfied in distance within a contig. Pair (GTGGTATATGCAAAACAACCT - TTAATATGCCCGAAAAAATTA) on contig 19 (3531543 nt) Astart:1348239 Aend:1348218 Bstart:1311094 Bend:1311115 CALCULATED DISTANCE APART: 37145 Pairs unsatisfied in distance within a contig. Pair (AGGTTTTTCAGGTTTTAGAAT - TTATATAATGTTTAGTTTCTC) on contig 37 (853709 nt) Astart:538392 Aend:538413 Bstart:551061 Bend:551040 CALCULATED DISTANCE APART: 12669 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#85 -> -209964 <- tig#35, A=121353 nt (start:87442, end:87463) B=1135475 nt (start:196053, end:196032) CALCULATED DISTANCE APART: -209964 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#47 -> -293197 <- tig#6, A=471458 nt (start:171694, end:171715) B=6870868 nt (start:13433, end:13412) CALCULATED DISTANCE APART: -293197 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136528, end:136549) B=15068 nt (start:1148, end:1169) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#4 -> -1562545 <- tig#101, A=3837743 nt (start:2278737, end:2278758) B=84691 nt (start:23539, end:23518) CALCULATED DISTANCE APART: -1562545 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -1443756 <- tig#r.4, A=2650694 nt (start:2066528, end:2066549) B=3837743 nt (start:2958153, end:2958174) CALCULATED DISTANCE APART: -1443756 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.86 -> -186976 <- tig#54, B=280231 nt (start:170102, end:170081) A=625914 nt (start:36874, end:36853) CALCULATED DISTANCE APART: -186976 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2355, end:2376) A=258385 nt (start:891, end:870) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig. Pair (GGTGAAACAGACTATGATGCC - ATATAACATGTCAAAACTGTT) on contig 41 (667251 nt) Astart:88318 Aend:88297 Bstart:75638 Bend:75659 CALCULATED DISTANCE APART: 12680 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#261 -> -18348 <- tig#125, A=1974 nt (start:51, end:72) B=54013 nt (start:36425, end:36404) CALCULATED DISTANCE APART: -18348 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.58 -> -1866109 <- tig#19, B=374416 nt (start:14156, end:14135) A=3531543 nt (start:1871953, end:1871932) CALCULATED DISTANCE APART: -1866109 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -284623 <- tig#48, B=4628067 nt (start:247508, end:247487) A=487359 nt (start:57115, end:57094) CALCULATED DISTANCE APART: -284623 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#57 -> -3231864 <- tig#7, A=258385 nt (start:255989, end:256010) B=3534247 nt (start:3249468, end:3249447) CALCULATED DISTANCE APART: -3231864 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16895, end:16874) A=1227811 nt (start:6920, end:6899) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AAAAGAAGAAGGAAATAGTAG - ATAAGCTTTTTATTAAATATG) on contig 15 (3712591 nt) Astart:1719418 Aend:1719439 Bstart:1728600 Bend:1728621 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -253389 <- tig#43, A=736718 nt (start:483678, end:483699) B=1235946 nt (start:20349, end:20328) CALCULATED DISTANCE APART: -253389 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#10 -> -2925313 <- tig#9, A=3047199 nt (start:251226, end:251247) B=3747885 nt (start:149340, end:149319) CALCULATED DISTANCE APART: -2925313 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#10 -> -2925312 <- tig#9, A=3047199 nt (start:251226, end:251247) B=3747885 nt (start:149339, end:149318) CALCULATED DISTANCE APART: -2925312 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGATTCTTAGATGATTGTGTC - TACACAGAAACATGTTTGGCA) on contig 37 (853709 nt) Astart:538877 Aend:538898 Bstart:551547 Bend:551526 CALCULATED DISTANCE APART: 12670 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459204, end:459183) A=1345436 nt (start:26456, end:26435) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#43 -> -1009138 <- tig#73, B=1235946 nt (start:226131, end:226152) A=171056 nt (start:19323, end:19302) CALCULATED DISTANCE APART: -1009138 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460514, end:460493) A=1345436 nt (start:25146, end:25125) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig. Pair (CAACAAATGGTGAATCACCTT - TCAAAATGACGTCGGACAGTG) on contig 2 (5014909 nt) Astart:1269991 Aend:1270012 Bstart:1284653 Bend:1284632 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -214292 <- tig#6, A=354284 nt (start:133900, end:133921) B=6870868 nt (start:13908, end:13887) CALCULATED DISTANCE APART: -214292 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#433 -> -944078 <- tig#r.29, A=1238 nt (start:506, end:527) B=1463708 nt (start:500362, end:500383) CALCULATED DISTANCE APART: -944078 < -2000 Pairs unsatisfied in distance within a contig. Pair (GACATTTGTTGGCTAGCTCTT - ATGAACGGAATAGTACTCTAA) on contig 5 (3689108 nt) Astart:1171707 Aend:1171728 Bstart:1186843 Bend:1186822 CALCULATED DISTANCE APART: 15136 Pairs unsatisfied in distance within a contig. Pair (ATGTATACACTATTTACTTAG - TTATGAATTAGTCAATAGATG) on contig 37 (853709 nt) Astart:838584 Aend:838563 Bstart:823079 Bend:823100 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16190, end:16169) A=1227811 nt (start:7625, end:7604) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.29 -> -1609395 <- tig#35, B=1463708 nt (start:953634, end:953613) A=1135475 nt (start:675761, end:675740) CALCULATED DISTANCE APART: -1609395 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33699, end:33678) A=855454 nt (start:18750, end:18729) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -205321 <- tig#84, A=354284 nt (start:325785, end:325806) B=197079 nt (start:196822, end:196801) CALCULATED DISTANCE APART: -205321 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -204456 <- tig#84, A=354284 nt (start:325785, end:325806) B=197079 nt (start:195957, end:195936) CALCULATED DISTANCE APART: -204456 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2525, end:2546) A=258385 nt (start:1061, end:1040) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#21 -> -2013833 <- tig#7, A=1811326 nt (start:1227017, end:1227038) B=3534247 nt (start:1449524, end:1449503) CALCULATED DISTANCE APART: -2013833 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.85 -> -18365 <- tig#94, B=121353 nt (start:4733, end:4712) A=93323 nt (start:33632, end:33611) CALCULATED DISTANCE APART: -18365 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282817, end:282838) B=2196 nt (start:998, end:977) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig. Pair (GATCAAGCATAAAGTAGAGGT - GTGGTTAATAGAATCTTAGGT) on contig 30 (1050452 nt) Astart:649509 Aend:649530 Bstart:665275 Bend:665254 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459219, end:459198) A=1345436 nt (start:26441, end:26420) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -1168778 <- tig#384, A=5070776 nt (start:3882225, end:3882246) B=1359 nt (start:227, end:206) CALCULATED DISTANCE APART: -1168778 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATGTCGGGGGCTTTTAGTGGA - CAATCCAATGATTAGTGTCTC) on contig 5 (3689108 nt) Astart:1169682 Aend:1169703 Bstart:1184817 Bend:1184796 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459554, end:459533) A=1345436 nt (start:26106, end:26085) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -1168778 <- tig#384, A=5070776 nt (start:3882950, end:3882971) B=1359 nt (start:952, end:931) CALCULATED DISTANCE APART: -1168778 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -633077 <- tig#46, B=4628067 nt (start:147194, end:147173) A=577887 nt (start:505883, end:505862) CALCULATED DISTANCE APART: -633077 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTGCCTCTGAAATTTAAGGCT - CCCTGCAATCGCTCAGATTCT) on contig 2 (5014909 nt) Astart:1269421 Aend:1269442 Bstart:1284083 Bend:1284062 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in pairing logic within a contig. Pair (TTCAATGTGATTTATTGTTTC - TATGATCACAAAAAAAAGTTA) on contig 19 (3531543 nt) Astart:3058553 Aend:3058532 Bstart:3050167 Bend:3050146 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -322558 <- tig#r.572, A=2650694 nt (start:2308915, end:2308936) B=1031 nt (start:252, end:273) CALCULATED DISTANCE APART: -322558 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#92 -> -2121327 <- tig#16, A=101136 nt (start:3378, end:3399) B=2098954 nt (start:2043569, end:2043548) CALCULATED DISTANCE APART: -2121327 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GTTCGTCAGGTGTCGGATTAA - GGACGGCCGACTGCCTAATGA) on contig 19 (3531543 nt) Astart:3058658 Aend:3058637 Bstart:3050062 Bend:3050041 Pairs unsatisfied in distance within a contig. Pair (AAGTTCAGTATCAATTAGCAA - TTTATATCACAAATATGGGTG) on contig 25 (1290536 nt) Astart:1184007 Aend:1184028 Bstart:1199294 Bend:1199273 CALCULATED DISTANCE APART: 15287 Pairs unsatisfied in distance within a contig. Pair (TCTGGGAGACGTCAATCTTGT - TAGTCTACACAGTTTACCCCT) on contig 15 (3712591 nt) Astart:3352432 Aend:3352453 Bstart:3377418 Bend:3377397 CALCULATED DISTANCE APART: 24986 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4186194, end:4186173) A=3712591 nt (start:367, end:346) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#62 -> -1467152 <- tig#25, B=354710 nt (start:53047, end:53068) A=1290536 nt (start:1185489, end:1185468) CALCULATED DISTANCE APART: -1467152 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.459 -> -147882 <- tig#53, B=1183 nt (start:131, end:110) A=354284 nt (start:167751, end:167730) CALCULATED DISTANCE APART: -147882 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TGTATTTGGAAGTTGTGTCGG - AAAGAAAAAAATCAAAATTTG) on contig 19 (3531543 nt) Astart:3059931 Aend:3059910 Bstart:3048792 Bend:3048771 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#48 -> -3151835 <- tig#12, B=487359 nt (start:39493, end:39514) A=2766197 nt (start:2723969, end:2723948) CALCULATED DISTANCE APART: -3151835 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#77 -> -224069 <- tig#9, B=160344 nt (start:87928, end:87949) A=3747885 nt (start:171653, end:171632) CALCULATED DISTANCE APART: -224069 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CGATCCTTACATGAGAATTCG - AACGCCGGAGTTAAGTTTAAT) on contig 6 (6870868 nt) Astart:2439923 Aend:2439944 Bstart:2446770 Bend:2446791 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728268, end:728289) A=1096 nt (start:353, end:332) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#3 -> -3148938 <- tig#14, A=3889482 nt (start:2724273, end:2724294) B=2271162 nt (start:2003729, end:2003708) CALCULATED DISTANCE APART: -3148938 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#148 -> -836231 <- tig#r.36, A=35830 nt (start:33839, end:33860) B=855454 nt (start:1214, end:1235) CALCULATED DISTANCE APART: -836231 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33574, end:33553) A=855454 nt (start:18875, end:18854) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.403 -> -2330792 <- tig#13, B=1321 nt (start:665, end:644) A=2650694 nt (start:2350127, end:2350106) CALCULATED DISTANCE APART: -2330792 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460489, end:460468) A=1345436 nt (start:25171, end:25150) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#265 -> -3126344 <- tig#4, A=1946 nt (start:1841, end:1862) B=3837743 nt (start:3146239, end:3146218) CALCULATED DISTANCE APART: -3126344 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219106, end:4219085) A=2598 nt (start:2515, end:2494) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#119 -> -7707 <- tig#r.49, A=46878 nt (start:31935, end:31956) B=399963 nt (start:387199, end:387220) CALCULATED DISTANCE APART: -7707 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#25 -> -666259 <- tig#2, B=1290536 nt (start:852752, end:852773) A=5014909 nt (start:248475, end:248454) CALCULATED DISTANCE APART: -666259 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:1850, end:1871) A=258385 nt (start:386, end:365) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10283, end:10262) A=2766197 nt (start:2151280, end:2151259) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16420, end:16399) A=1227811 nt (start:7395, end:7374) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.15 -> -3863647 <- tig#1, B=3712591 nt (start:1966232, end:1966211) A=4853111 nt (start:1917415, end:1917394) CALCULATED DISTANCE APART: -3863647 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282497, end:282518) B=2196 nt (start:678, end:657) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12841, end:12820) A=91302 nt (start:11352, end:11331) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#13 -> -4698233 <- tig#19, A=2650694 nt (start:456619, end:456640) B=3531543 nt (start:2524158, end:2524137) CALCULATED DISTANCE APART: -4698233 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GAATCAAATAGTGTGGGAGTG - AAACGAATTTTTCAGTTTTCA) on contig 15 (3712591 nt) Astart:1719238 Aend:1719259 Bstart:1728780 Bend:1728801 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#305 -> -2202335 <- tig#r.19, A=1638 nt (start:357, end:378) B=3531543 nt (start:1310489, end:1310510) CALCULATED DISTANCE APART: -2202335 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#77 -> -122338 <- tig#99, B=160344 nt (start:25179, end:25200) A=88102 nt (start:7173, end:7152) CALCULATED DISTANCE APART: -122338 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#12 -> -167604 <- tig#557, B=2766197 nt (start:2579504, end:2579525) A=1050 nt (start:911, end:890) CALCULATED DISTANCE APART: -167604 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#119 -> -7707 <- tig#r.49, A=46878 nt (start:31845, end:31866) B=399963 nt (start:387289, end:387310) CALCULATED DISTANCE APART: -7707 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#9 -> -2729016 <- tig#69, A=3747885 nt (start:1134503, end:1134524) B=186132 nt (start:135634, end:135613) CALCULATED DISTANCE APART: -2729016 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -40662 <- tig#443, A=736718 nt (start:676576, end:676597) B=1213 nt (start:520, end:499) CALCULATED DISTANCE APART: -40662 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#53 -> -24524 <- tig#2, B=354284 nt (start:340669, end:340690) A=5014909 nt (start:30909, end:30888) CALCULATED DISTANCE APART: -24524 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2670, end:2691) A=258385 nt (start:1206, end:1185) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33809, end:33788) A=855454 nt (start:18640, end:18619) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136393, end:136414) B=15068 nt (start:1283, end:1304) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTACTAATTTTTCTTTAAAAT - TACCATCAATGATCTGATGTA) on contig 2 (5014909 nt) Astart:1269756 Aend:1269777 Bstart:1284418 Bend:1284397 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#5 -> -5542227 <- tig#7, B=3689108 nt (start:381448, end:381469) A=3534247 nt (start:2254567, end:2254546) CALCULATED DISTANCE APART: -5542227 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459454, end:459433) A=1345436 nt (start:26206, end:26185) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GGTGGGAATCAAATAGTGTGG - AATTTTTCAGTTTTCACAAGG) on contig 15 (3712591 nt) Astart:1719233 Aend:1719254 Bstart:1728785 Bend:1728806 Pairs unsatisfied in pairing logic within a contig. Pair (GATGTGACCTTTTTCACGATT - CAAGGAAATCTACTCGACCCT) on contig 51 (875428 nt) Astart:751125 Aend:751146 Bstart:740616 Bend:740595 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.78 -> -118368 <- tig#98, B=184063 nt (start:64815, end:64794) A=88184 nt (start:73553, end:73532) CALCULATED DISTANCE APART: -118368 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -40662 <- tig#443, A=736718 nt (start:676981, end:677002) B=1213 nt (start:925, end:904) CALCULATED DISTANCE APART: -40662 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CTATGTCCATAATCTTCAAAG - ACATGTACGATCTAACCCACA) on contig 19 (3531543 nt) Astart:3060076 Aend:3060055 Bstart:3048647 Bend:3048626 Pairs unsatisfied in pairing logic within a contig. Pair (CGTCAATTTCTACTTTTATCT - TGATAATCTTATCACGGAAGA) on contig 3 (3889482 nt) Astart:2808553 Aend:2808532 Bstart:2767905 Bend:2767884 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10123, end:10102) A=2766197 nt (start:2151440, end:2151419) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.16 -> -2024002 <- tig#291, B=2098954 nt (start:2043653, end:2043632) A=1714 nt (start:349, end:328) CALCULATED DISTANCE APART: -2024002 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#11 -> -5298591 <- tig#r.19, A=4628067 nt (start:146982, end:147003) B=3531543 nt (start:2694037, end:2694058) CALCULATED DISTANCE APART: -5298591 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GTCATGTTTTTATAACCTTGA - AAACTCAAAAGCATGCAATAA) on contig 19 (3531543 nt) Astart:3058408 Aend:3058387 Bstart:3050312 Bend:3050291 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4186019, end:4185998) A=3712591 nt (start:542, end:521) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -214288 <- tig#6, A=354284 nt (start:132844, end:132865) B=6870868 nt (start:12848, end:12827) CALCULATED DISTANCE APART: -214288 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -3661475 <- tig#r.3, A=262460 nt (start:68596, end:68617) B=3889482 nt (start:401871, end:401892) CALCULATED DISTANCE APART: -3661475 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -3661476 <- tig#r.3, A=262460 nt (start:68596, end:68617) B=3889482 nt (start:401870, end:401891) CALCULATED DISTANCE APART: -3661476 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -1335675 <- tig#4, B=3747885 nt (start:2858752, end:2858773) A=3837743 nt (start:466542, end:466521) CALCULATED DISTANCE APART: -1335675 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.101 -> -46850 <- tig#107, B=84691 nt (start:24199, end:24178) A=68734 nt (start:42651, end:42630) CALCULATED DISTANCE APART: -46850 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#47 -> -583213 <- tig#r.69, A=471458 nt (start:9953, end:9974) B=186132 nt (start:44424, end:44445) CALCULATED DISTANCE APART: -583213 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.29 -> -830658 <- tig#48, B=1463708 nt (start:513268, end:513247) A=487359 nt (start:337390, end:337369) CALCULATED DISTANCE APART: -830658 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTAAGTTGTTGTAATTTTTTT - CGGAATTGAGTGATTGGATCT) on contig 71 (271268 nt) Astart:123974 Aend:123953 Bstart:118606 Bend:118627 CALCULATED DISTANCE APART: 5368 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#167 -> -1674408 <- tig#34, A=25236 nt (start:10127, end:10148) B=1705564 nt (start:1679299, end:1679278) CALCULATED DISTANCE APART: -1674408 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -2751901 <- tig#12, B=262460 nt (start:70377, end:70356) A=2766197 nt (start:2701524, end:2701503) CALCULATED DISTANCE APART: -2751901 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -1335758 <- tig#4, B=3747885 nt (start:2856812, end:2856833) A=3837743 nt (start:464685, end:464664) CALCULATED DISTANCE APART: -1335758 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.6 -> -5416205 <- tig#35, B=6870868 nt (start:4671714, end:4671693) A=1135475 nt (start:764491, end:764470) CALCULATED DISTANCE APART: -5416205 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.42 -> -1433157 <- tig#20, B=659641 nt (start:2323, end:2302) A=2328057 nt (start:1450834, end:1450813) CALCULATED DISTANCE APART: -1433157 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#10 -> -2925308 <- tig#9, B=3047199 nt (start:251224, end:251245) A=3747885 nt (start:149333, end:149312) CALCULATED DISTANCE APART: -2925308 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459789, end:459768) A=1345436 nt (start:25871, end:25850) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -1335763 <- tig#4, B=3747885 nt (start:2857567, end:2857588) A=3837743 nt (start:465445, end:465424) CALCULATED DISTANCE APART: -1335763 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#34 -> -23714 <- tig#114, A=1705564 nt (start:1679284, end:1679305) B=54818 nt (start:17434, end:17413) CALCULATED DISTANCE APART: -23714 < -2000 Pairs unsatisfied in distance within a contig. Pair (CGTAAGAATTGTATCCTTGTT - ACAATTCTTACGCCTTTAAGA) on contig 34 (1705564 nt) Astart:1679284 Aend:1679305 Bstart:1679296 Bend:1679275 CALCULATED DISTANCE APART: 12 Pairs unsatisfied in distance within a contig. Pair (CGTAAGAATTGTATCCTTGTT - TTCTAACAAGGATACAATTCT) on contig 34 (1705564 nt) Astart:1679284 Aend:1679305 Bstart:1679309 Bend:1679288 CALCULATED DISTANCE APART: 25 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#265 -> -3126344 <- tig#4, A=1946 nt (start:1716, end:1737) B=3837743 nt (start:3146114, end:3146093) CALCULATED DISTANCE APART: -3126344 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460754, end:460733) A=1345436 nt (start:24906, end:24885) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282642, end:282663) B=2196 nt (start:823, end:802) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6228 <- tig#57, B=27696 nt (start:1549, end:1570) A=258385 nt (start:81, end:60) CALCULATED DISTANCE APART: -6228 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#63 -> -542860 <- tig#r.42, A=274372 nt (start:44015, end:44036) B=659641 nt (start:327138, end:327159) CALCULATED DISTANCE APART: -542860 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.403 -> -2330792 <- tig#13, B=1321 nt (start:905, end:884) A=2650694 nt (start:2349887, end:2349866) CALCULATED DISTANCE APART: -2330792 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.48 -> -951804 <- tig#32, B=487359 nt (start:65357, end:65336) A=972151 nt (start:906447, end:906426) CALCULATED DISTANCE APART: -951804 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.35 -> -772931 <- tig#95, B=1135475 nt (start:700812, end:700791) A=92653 nt (start:92119, end:92098) CALCULATED DISTANCE APART: -772931 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AATCAACTTCACCAAGTGATC - TTGGGTTTGTTTAAGAACATT) on contig 7 (3534247 nt) Astart:2257262 Aend:2257241 Bstart:2237519 Bend:2237498 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.43 -> -583493 <- tig#48, B=1235946 nt (start:266027, end:266006) A=487359 nt (start:337466, end:337445) CALCULATED DISTANCE APART: -583493 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.409 -> -1019852 <- tig#23, B=1303 nt (start:766, end:745) A=1345436 nt (start:1039086, end:1039065) CALCULATED DISTANCE APART: -1019852 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#73 -> -6652852 <- tig#6, A=171056 nt (start:153349, end:153370) B=6870868 nt (start:6655145, end:6655124) CALCULATED DISTANCE APART: -6652852 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.15 -> -3863647 <- tig#1, B=3712591 nt (start:1966207, end:1966186) A=4853111 nt (start:1917440, end:1917419) CALCULATED DISTANCE APART: -3863647 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AACTGGTGAAAATCAAACATT - GTAGAACACGTGACACCAGAC) on contig 4 (3837743 nt) Astart:2357906 Aend:2357927 Bstart:2360156 Bend:2360177 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.140 -> -13988 <- tig#136, B=26310 nt (start:11400, end:11379) A=49085 nt (start:22588, end:22567) CALCULATED DISTANCE APART: -13988 < -2000 Pairs unsatisfied in distance within a contig. Pair (GTGTGGCATACTTGGGAAGCG - TAGAGAGTTGCAGAGAAATCT) on contig 15 (3712591 nt) Astart:3350130 Aend:3350151 Bstart:3375118 Bend:3375097 CALCULATED DISTANCE APART: 24988 Pairs unsatisfied in distance within a contig. Pair (ATCTGTTACTACATGCAATGC - TTTTCCCCTGTCCAAAACAAA) on contig 118 (66247 nt) Astart:2484 Aend:2505 Bstart:6910 Bend:6889 CALCULATED DISTANCE APART: 4426 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#119 -> -7707 <- tig#r.49, A=46878 nt (start:32085, end:32106) B=399963 nt (start:387049, end:387070) CALCULATED DISTANCE APART: -7707 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#25 -> -666259 <- tig#2, B=1290536 nt (start:852822, end:852843) A=5014909 nt (start:248545, end:248524) CALCULATED DISTANCE APART: -666259 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#86 -> -735496 <- tig#17, B=280231 nt (start:15084, end:15105) A=1959065 nt (start:490349, end:490328) CALCULATED DISTANCE APART: -735496 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282362, end:282383) B=2196 nt (start:543, end:522) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig. Pair (CAACCTCCAAAAGCCCATCTG - CTTATTACAGTATTTAAAAAA) on contig 14 (2271162 nt) Astart:1538036 Aend:1538057 Bstart:2003529 Bend:2003508 CALCULATED DISTANCE APART: 465493 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#77 -> -122338 <- tig#99, B=160344 nt (start:25084, end:25105) A=88102 nt (start:7078, end:7057) CALCULATED DISTANCE APART: -122338 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#6 -> -3712398 <- tig#1, A=6870868 nt (start:5007542, end:5007563) B=4853111 nt (start:1869072, end:1869051) CALCULATED DISTANCE APART: -3712398 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATCTCCGTGGAGAGGAAGACG - GACATTAGCCTTCAGGACTAA) on contig 37 (853709 nt) Astart:838994 Aend:838973 Bstart:823489 Bend:823510 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#43 -> -1009149 <- tig#73, B=1235946 nt (start:225801, end:225822) A=171056 nt (start:19004, end:18983) CALCULATED DISTANCE APART: -1009149 < -2000 Pairs unsatisfied in distance within a contig. Pair (AACAGGGTGTGAAGGATGAGG - AGAAGAAAGGATTCAATTATA) on contig 2 (5014909 nt) Astart:1269586 Aend:1269607 Bstart:1284248 Bend:1284227 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#283 -> -3818458 <- tig#2, A=1768 nt (start:423, end:444) B=5014909 nt (start:3837113, end:3837092) CALCULATED DISTANCE APART: -3818458 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#39 -> -2984839 <- tig#12, B=736718 nt (start:457403, end:457424) A=2766197 nt (start:2725524, end:2725503) CALCULATED DISTANCE APART: -2984839 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282242, end:282263) B=2196 nt (start:423, end:402) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#5 -> -1978313 <- tig#r.12, A=3689108 nt (start:3494695, end:3494716) B=2766197 nt (start:962297, end:962318) CALCULATED DISTANCE APART: -1978313 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#12 -> -245465 <- tig#56, B=2766197 nt (start:2696546, end:2696567) A=262460 nt (start:195814, end:195793) CALCULATED DISTANCE APART: -245465 < -2000 Pairs unsatisfied in distance within a contig. Pair (AACAAGAAGCAAGAACCACAT - TTAATTACCAGGATCAGCGAA) on contig 5 (3689108 nt) Astart:1171887 Aend:1171908 Bstart:1187023 Bend:1187002 CALCULATED DISTANCE APART: 15136 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#433 -> -944078 <- tig#r.29, A=1238 nt (start:326, end:347) B=1463708 nt (start:500542, end:500563) CALCULATED DISTANCE APART: -944078 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#37 -> -1821163 <- tig#25, A=853709 nt (start:114246, end:114267) B=1290536 nt (start:1101700, end:1101679) CALCULATED DISTANCE APART: -1821163 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CAAGCAGTTCGTCACGCAGGT - TATGTGAATCTTGCTTTAGAT) on contig 15 (3712591 nt) Astart:1717328 Aend:1717349 Bstart:1730690 Bend:1730711 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082597, end:2082618) B=976128 nt (start:960925, end:960946) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTTATGTGCTCTGCTCATTGT - CGATGATGTATGGAAAAAAGA) on contig 37 (853709 nt) Astart:538742 Aend:538763 Bstart:551412 Bend:551391 CALCULATED DISTANCE APART: 12670 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#9 -> -2729016 <- tig#69, A=3747885 nt (start:1134463, end:1134484) B=186132 nt (start:135594, end:135573) CALCULATED DISTANCE APART: -2729016 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -4519619 <- tig#r.11, A=2766197 nt (start:1675480, end:1675501) B=4628067 nt (start:1179165, end:1179186) CALCULATED DISTANCE APART: -4519619 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GTCAACCGCCAAAATCACCAC - TTCTTAGCTTATTCCAAGGAA) on contig 19 (3531543 nt) Astart:3059103 Aend:3059082 Bstart:3049617 Bend:3049596 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -8559 <- tig#129, A=354284 nt (start:325775, end:325796) B=39603 nt (start:50, end:29) CALCULATED DISTANCE APART: -8559 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#53 -> -132517 <- tig#r.63, A=354284 nt (start:325775, end:325796) B=274372 nt (start:150364, end:150385) CALCULATED DISTANCE APART: -132517 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#20 -> -1909762 <- tig#r.37, A=2328057 nt (start:833281, end:833302) B=853709 nt (start:418723, end:418744) CALCULATED DISTANCE APART: -1909762 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460094, end:460073) A=1345436 nt (start:25566, end:25545) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATGTGATGAAGAAGTTGAATC - CAACCACACGCCTGAAATACA) on contig 1 (4853111 nt) Astart:346400 Aend:346421 Bstart:391677 Bend:391656 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in pairing logic within a contig. Pair (TGGCTCGTCGTGCAGCTCCAT - AAGAAACAAAAATAGAAAATG) on contig 15 (3712591 nt) Astart:1716858 Aend:1716879 Bstart:1731160 Bend:1731181 Pairs unsatisfied in distance within a contig. Pair (TGAAGCTTCTTTAAACTCTAC - TTAAACTCACCAATGTCTATT) on contig 5 (3689108 nt) Astart:1178497 Aend:1178476 Bstart:1163363 Bend:1163384 CALCULATED DISTANCE APART: 15134 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#120 -> -1341554 <- tig#29, B=44710 nt (start:43157, end:43178) A=1463708 nt (start:1360001, end:1359980) CALCULATED DISTANCE APART: -1341554 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.6 -> -5416200 <- tig#35, B=6870868 nt (start:4671949, end:4671928) A=1135475 nt (start:764251, end:764230) CALCULATED DISTANCE APART: -5416200 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.58 -> -1432680 <- tig#11, B=374416 nt (start:2215, end:2194) A=4628067 nt (start:1450465, end:1450444) CALCULATED DISTANCE APART: -1432680 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTTTTACTAACAAAAACGAAA - GGTTTCGATGAGATTGCTAGG) on contig 109 (66564 nt) Astart:5639 Aend:5618 Bstart:3 Bend:24 CALCULATED DISTANCE APART: 5636 Pairs unsatisfied in pairing logic within a contig. Pair (GTGTGGGAGTGGCAGAGTGAT - GATTTTAACAAAACGAATTTT) on contig 15 (3712591 nt) Astart:1719248 Aend:1719269 Bstart:1728770 Bend:1728791 Pairs unsatisfied in distance within a contig. Pair (TTTTCAGGGGGAAAAGGGATT - ATGTATACAGGTAATTTTTTT) on contig 6 (6870868 nt) Astart:1138739 Aend:1138718 Bstart:1130284 Bend:1130305 CALCULATED DISTANCE APART: 8455 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#120 -> -1341554 <- tig#29, B=44710 nt (start:44237, end:44258) A=1463708 nt (start:1361081, end:1361060) CALCULATED DISTANCE APART: -1341554 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CCGGCGGCGGATGCTTCGGCT - GTAACATAATCTTATTACAAA) on contig 15 (3712591 nt) Astart:1718693 Aend:1718714 Bstart:1729325 Bend:1729346 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#23 -> -831639 <- tig#104, A=1345436 nt (start:567156, end:567177) B=97911 nt (start:73359, end:73338) CALCULATED DISTANCE APART: -831639 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728713, end:728734) A=1096 nt (start:798, end:777) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#48 -> -3151835 <- tig#12, B=487359 nt (start:39498, end:39519) A=2766197 nt (start:2723974, end:2723953) CALCULATED DISTANCE APART: -3151835 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728688, end:728709) A=1096 nt (start:773, end:752) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#53 -> -314812 <- tig#75, B=354284 nt (start:24844, end:24865) A=373953 nt (start:5372, end:5351) CALCULATED DISTANCE APART: -314812 < -2000 Pairs unsatisfied in distance within a contig. Pair (AATACTAAGATTGTGAATCGT - GAAAATATACTATATTTAAGA) on contig 37 (853709 nt) Astart:838624 Aend:838603 Bstart:823119 Bend:823140 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#103 -> -216461 <- tig#48, A=211876 nt (start:14354, end:14375) B=487359 nt (start:38939, end:38918) CALCULATED DISTANCE APART: -216461 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#81 -> -2917512 <- tig#r.7, A=258617 nt (start:240984, end:241005) B=3534247 nt (start:614368, end:614389) CALCULATED DISTANCE APART: -2917512 < -2000 Pairs unsatisfied in distance within a contig. Pair (AACAACTTTGGAACCCACCGA - TATTATTTAATTTATTTTGGA) on contig 34 (1705564 nt) Astart:680024 Aend:680003 Bstart:665061 Bend:665082 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.3 -> -3742042 <- tig#15, B=3889482 nt (start:1579578, end:1579557) A=3712591 nt (start:2182464, end:2182443) CALCULATED DISTANCE APART: -3742042 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728448, end:728469) A=1096 nt (start:533, end:512) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2890, end:2911) A=258385 nt (start:1426, end:1405) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260442, end:2260463) B=356404 nt (start:342782, end:342803) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig. Pair (GATTGATGTTACACTGATTGA - CGCTAATCTTCTGCTCAAAAA) on contig 1 (4853111 nt) Astart:345686 Aend:345707 Bstart:390952 Bend:390931 CALCULATED DISTANCE APART: 45266 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -4201 <- tig#r.96, A=262460 nt (start:244421, end:244442) B=91302 nt (start:85140, end:85161) CALCULATED DISTANCE APART: -4201 < -2000 Pairs unsatisfied in distance within a contig. Pair (GATTCACTGTTAAGTTAGATG - AACGCACACTCAAAGCAACTG) on contig 6 (6870868 nt) Astart:1138354 Aend:1138333 Bstart:1129927 Bend:1129948 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#6 -> -3712398 <- tig#1, A=6870868 nt (start:5007432, end:5007453) B=4853111 nt (start:1868962, end:1868941) CALCULATED DISTANCE APART: -3712398 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCTTCCTTTGACTATTGCTAA - CATATGCTAATTTAGGCATGT) on contig 37 (853709 nt) Astart:538212 Aend:538233 Bstart:550864 Bend:550843 CALCULATED DISTANCE APART: 12652 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#283 -> -3818458 <- tig#2, A=1768 nt (start:208, end:229) B=5014909 nt (start:3836898, end:3836877) CALCULATED DISTANCE APART: -3818458 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:1785, end:1806) A=258385 nt (start:321, end:300) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730922, end:730943) B=3531543 nt (start:3200496, end:3200475) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#5 -> -710554 <- tig#54, A=3689108 nt (start:3494775, end:3494796) B=625914 nt (start:536221, end:536200) CALCULATED DISTANCE APART: -710554 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -1256268 <- tig#r.25, A=262460 nt (start:205887, end:205908) B=1290536 nt (start:70841, end:70862) CALCULATED DISTANCE APART: -1256268 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -4816267 <- tig#r.3, A=2766197 nt (start:947695, end:947716) B=3889482 nt (start:871717, end:871738) CALCULATED DISTANCE APART: -4816267 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#26 -> -90650 <- tig#95, B=1332708 nt (start:1310598, end:1310619) A=92653 nt (start:88540, end:88519) CALCULATED DISTANCE APART: -90650 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.257 -> -2902765 <- tig#8, B=1995 nt (start:1901, end:1880) A=5070776 nt (start:2920864, end:2920843) CALCULATED DISTANCE APART: -2902765 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#52 -> -356009 <- tig#3, B=356404 nt (start:122, end:143) A=3889482 nt (start:19727, end:19706) CALCULATED DISTANCE APART: -356009 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33649, end:33628) A=855454 nt (start:18800, end:18779) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATATTATCCAAGACACTCTCC - CGTGAACCCCGAGCGGTGCGT) on contig 131 (36503 nt) Astart:21267 Aend:21288 Bstart:13592 Bend:13613 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -214292 <- tig#6, A=354284 nt (start:134445, end:134466) B=6870868 nt (start:14453, end:14432) CALCULATED DISTANCE APART: -214292 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTGTCATCTTGCTCGTCTTCT - TGCCTTTGCGGTTATTCTCTG) on contig 5 (3689108 nt) Astart:1169947 Aend:1169968 Bstart:1185082 Bend:1185061 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728623, end:728644) A=1096 nt (start:708, end:687) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig. Pair (GTTTACGCATCTGGAGCTTTA - CCTCAATAACTGCCGATTTGC) on contig 19 (3531543 nt) Astart:1348114 Aend:1348093 Bstart:1310969 Bend:1310990 CALCULATED DISTANCE APART: 37145 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#4 -> -2752665 <- tig#9, B=3837743 nt (start:2984529, end:2984550) A=3747885 nt (start:1919451, end:1919430) CALCULATED DISTANCE APART: -2752665 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GTGATTTAACCATTCTGCTTG - CTTTATTATTAAAGGTATTAT) on contig 19 (3531543 nt) Astart:3059826 Aend:3059805 Bstart:3048897 Bend:3048876 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#37 -> -1821163 <- tig#25, A=853709 nt (start:114276, end:114297) B=1290536 nt (start:1101730, end:1101709) CALCULATED DISTANCE APART: -1821163 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#51 -> -548590 <- tig#79, B=875428 nt (start:391071, end:391092) A=136600 nt (start:84233, end:84212) CALCULATED DISTANCE APART: -548590 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#305 -> -2202335 <- tig#r.19, A=1638 nt (start:347, end:368) B=3531543 nt (start:1310499, end:1310520) CALCULATED DISTANCE APART: -2202335 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#42 -> -1103013 <- tig#r.43, A=659641 nt (start:547018, end:547039) B=1235946 nt (start:225556, end:225577) CALCULATED DISTANCE APART: -1103013 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CTAAATTATGATGTTGTTTCT - TGGACACTCAAAAAGAAGATG) on contig 19 (3531543 nt) Astart:3060026 Aend:3060005 Bstart:3048697 Bend:3048676 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136123, end:136144) B=15068 nt (start:1553, end:1574) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#26 -> -90650 <- tig#95, B=1332708 nt (start:1310518, end:1310539) A=92653 nt (start:88460, end:88439) CALCULATED DISTANCE APART: -90650 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.48 -> -3108447 <- tig#12, B=487359 nt (start:404828, end:404807) A=2766197 nt (start:2723619, end:2723598) CALCULATED DISTANCE APART: -3108447 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTGCAGACATTCTTTTCGCCA - TATCCCGGTGTGGAGCATGTT) on contig 10 (3047199 nt) Astart:790054 Aend:790033 Bstart:776141 Bend:776162 CALCULATED DISTANCE APART: 13913 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219276, end:4219255) A=2598 nt (start:2345, end:2324) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#84 -> -1659583 <- tig#34, B=197079 nt (start:196801, end:196822) A=1705564 nt (start:1679305, end:1679284) CALCULATED DISTANCE APART: -1659583 < -2000 Pairs unsatisfied in distance within a contig. Pair (AACAAGGATACAATTCTTACG - AAAGGCGTAAGAATTGTATCC) on contig 34 (1705564 nt) Astart:1679305 Aend:1679284 Bstart:1679279 Bend:1679300 CALCULATED DISTANCE APART: 26 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#58 -> -329129 <- tig#94, A=374416 nt (start:44219, end:44240) B=93323 nt (start:18932, end:18911) CALCULATED DISTANCE APART: -329129 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#433 -> -944078 <- tig#r.29, A=1238 nt (start:751, end:772) B=1463708 nt (start:500117, end:500138) CALCULATED DISTANCE APART: -944078 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082807, end:2082828) B=976128 nt (start:960715, end:960736) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16910, end:16889) A=1227811 nt (start:6905, end:6884) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig. Pair (GATTAGTAAAGTTTAATTAGG - TAAGAAATAATGAAAAAGAAA) on contig 37 (853709 nt) Astart:838359 Aend:838338 Bstart:822854 Bend:822875 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#13 -> -1029403 <- tig#12, B=2650694 nt (start:2202538, end:2202559) A=2766197 nt (start:601247, end:601226) CALCULATED DISTANCE APART: -1029403 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#11 -> -4402422 <- tig#100, A=4628067 nt (start:266482, end:266503) B=122157 nt (start:60837, end:60816) CALCULATED DISTANCE APART: -4402422 < -2000 Pairs unsatisfied in distance within a contig. Pair (ACTGTTTCTTTTAGACGTAAG - ACAAATCCTTCAGCCATAAAC) on contig 2 (5014909 nt) Astart:1269361 Aend:1269382 Bstart:1284023 Bend:1284002 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185559, end:4185538) A=3712591 nt (start:1002, end:981) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#33 -> -492044 <- tig#32, A=1290487 nt (start:1235752, end:1235773) B=972151 nt (start:457309, end:457288) CALCULATED DISTANCE APART: -492044 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#26 -> -90650 <- tig#95, B=1332708 nt (start:1310643, end:1310664) A=92653 nt (start:88585, end:88564) CALCULATED DISTANCE APART: -90650 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#47 -> -293197 <- tig#6, A=471458 nt (start:171819, end:171840) B=6870868 nt (start:13558, end:13537) CALCULATED DISTANCE APART: -293197 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#157 -> -33826 <- tig#r.114, A=17112 nt (start:687, end:708) B=54818 nt (start:17417, end:17438) CALCULATED DISTANCE APART: -33826 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#157 -> -13549 <- tig#r.125, A=17112 nt (start:687, end:708) B=54013 nt (start:36889, end:36910) CALCULATED DISTANCE APART: -13549 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259987, end:2260008) B=356404 nt (start:343237, end:343258) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730522, end:730543) B=3531543 nt (start:3200096, end:3200075) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#237 -> -203384 <- tig#r.20, A=2510 nt (start:806, end:827) B=2328057 nt (start:2106377, end:2106398) CALCULATED DISTANCE APART: -203384 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GCCCGTCATGTCGTTAGAGTA - AACTTTTGAACAAACAAATAA) on contig 14 (2271162 nt) Astart:658406 Aend:658385 Bstart:495505 Bend:495484 Pairs unsatisfied in distance within a contig. Pair (TAGATGCGGATAAGCATGTCC - TATTATTGCTTCTGCAACGCA) on contig 6 (6870868 nt) Astart:1138339 Aend:1138318 Bstart:1129912 Bend:1129933 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig. Pair (TTTGACATTCAAGTTTCCTTT - GTTTCTTTCTCAATATAATAA) on contig 15 (3712591 nt) Astart:2102629 Aend:2102608 Bstart:2055857 Bend:2055878 CALCULATED DISTANCE APART: 46772 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#12 -> -245458 <- tig#56, A=2766197 nt (start:2696538, end:2696559) B=262460 nt (start:195799, end:195778) CALCULATED DISTANCE APART: -245458 < -2000 Pairs unsatisfied in distance within a contig. Pair (CCAGGAGCCGGAGCAGCGCGT - GTGAGACAATAATCATTGGTA) on contig 37 (853709 nt) Astart:839024 Aend:839003 Bstart:823519 Bend:823540 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2975, end:2996) A=258385 nt (start:1511, end:1490) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.16 -> -2023999 <- tig#291, B=2098954 nt (start:2043644, end:2043623) A=1714 nt (start:355, end:334) CALCULATED DISTANCE APART: -2023999 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TAATGTTTTGGAGTCGAATAT - TTAAGATCCGGTTGCGGTTTA) on contig 129 (39603 nt) Astart:863 Aend:884 Bstart:52 Bend:31 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#129 -> -36464 <- tig#98, A=39603 nt (start:863, end:884) B=88184 nt (start:17724, end:17703) CALCULATED DISTANCE APART: -36464 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.15 -> -3863647 <- tig#1, B=3712591 nt (start:1966292, end:1966271) A=4853111 nt (start:1917355, end:1917334) CALCULATED DISTANCE APART: -3863647 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#132 -> -17441 <- tig#r.114, A=34686 nt (start:34646, end:34667) B=54818 nt (start:17417, end:17438) CALCULATED DISTANCE APART: -17441 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#132 -> -850520 <- tig#r.51, A=34686 nt (start:34646, end:34667) B=875428 nt (start:4948, end:4969) CALCULATED DISTANCE APART: -850520 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#132 -> -6321 <- tig#r.34, A=34686 nt (start:34646, end:34667) B=1705564 nt (start:1679283, end:1679304) CALCULATED DISTANCE APART: -6321 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATATGAGTCTTTGGCTTTGTG - CACAAAGCCAAAGACTCATAT) on contig 132 (34686 nt) Astart:34646 Aend:34667 Bstart:34667 Bend:34646 CALCULATED DISTANCE APART: 21 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#132 -> -6327 <- tig#r.34, A=34686 nt (start:34646, end:34667) B=1705564 nt (start:1679277, end:1679298) CALCULATED DISTANCE APART: -6327 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#132 -> -17442 <- tig#r.114, A=34686 nt (start:34646, end:34667) B=54818 nt (start:17416, end:17437) CALCULATED DISTANCE APART: -17442 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728858, end:728879) A=1096 nt (start:943, end:922) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.257 -> -2902765 <- tig#8, B=1995 nt (start:1111, end:1090) A=5070776 nt (start:2921654, end:2921633) CALCULATED DISTANCE APART: -2902765 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#12 -> -245484 <- tig#56, B=2766197 nt (start:2696530, end:2696551) A=262460 nt (start:195817, end:195796) CALCULATED DISTANCE APART: -245484 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16985, end:16964) A=1227811 nt (start:6830, end:6809) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#84 -> -1659591 <- tig#34, B=197079 nt (start:196797, end:196818) A=1705564 nt (start:1679309, end:1679288) CALCULATED DISTANCE APART: -1659591 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3583 <- tig#26, B=1171658 nt (start:1171053, end:1171074) A=1332708 nt (start:22978, end:22957) CALCULATED DISTANCE APART: -3583 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GGTTTATAACCCGAGAGCTAT - ATCAATATTCTTATACTCAGC) on contig 15 (3712591 nt) Astart:1718833 Aend:1718854 Bstart:1729185 Bend:1729206 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.53 -> -813975 <- tig#7, B=354284 nt (start:181268, end:181247) A=3534247 nt (start:652707, end:652686) CALCULATED DISTANCE APART: -813975 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#101 -> -2656718 <- tig#12, A=84691 nt (start:11195, end:11216) B=2766197 nt (start:2603222, end:2603201) CALCULATED DISTANCE APART: -2656718 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGAGTACGTTTTTCTTTTTTA - TGAGTAAAAGAGTAAGTATTG) on contig 30 (1050452 nt) Astart:649319 Aend:649340 Bstart:665085 Bend:665064 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730052, end:730073) B=3531543 nt (start:3199626, end:3199605) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -40662 <- tig#443, A=736718 nt (start:676591, end:676612) B=1213 nt (start:535, end:514) CALCULATED DISTANCE APART: -40662 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#13 -> -2221718 <- tig#10, A=2650694 nt (start:2038101, end:2038122) B=3047199 nt (start:1629125, end:1629104) CALCULATED DISTANCE APART: -2221718 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#119 -> -7707 <- tig#r.49, A=46878 nt (start:32130, end:32151) B=399963 nt (start:387004, end:387025) CALCULATED DISTANCE APART: -7707 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#26 -> -90650 <- tig#95, B=1332708 nt (start:1310523, end:1310544) A=92653 nt (start:88465, end:88444) CALCULATED DISTANCE APART: -90650 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#5 -> -5542227 <- tig#7, B=3689108 nt (start:381458, end:381479) A=3534247 nt (start:2254577, end:2254556) CALCULATED DISTANCE APART: -5542227 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#120 -> -1341554 <- tig#29, B=44710 nt (start:44232, end:44253) A=1463708 nt (start:1361076, end:1361055) CALCULATED DISTANCE APART: -1341554 < -2000 Pairs unsatisfied in distance within a contig. Pair (TACTTCTTAGAAATATCTTCA - ATTTTAGACAAGACGGGTTTC) on contig 30 (1050452 nt) Astart:650094 Aend:650115 Bstart:665860 Bend:665839 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in distance within a contig. Pair (TATTTTTAACAGATTCTTTCT - CTTGAAGTTTACCAAGGCTTC) on contig 10 (3047199 nt) Astart:789904 Aend:789883 Bstart:766166 Bend:766187 CALCULATED DISTANCE APART: 23738 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#48 -> -3151847 <- tig#12, B=487359 nt (start:40421, end:40442) A=2766197 nt (start:2724909, end:2724888) CALCULATED DISTANCE APART: -3151847 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#5 -> -5542227 <- tig#7, B=3689108 nt (start:381453, end:381474) A=3534247 nt (start:2254572, end:2254551) CALCULATED DISTANCE APART: -5542227 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AATAATAATAGTGAAGAGGGC - AGTTCTTGCATCAATCTACCT) on contig 4 (3837743 nt) Astart:2358141 Aend:2358162 Bstart:2359921 Bend:2359942 Pairs unsatisfied in pairing logic within a contig. Pair (CGAATGGCTTGGCAAAGTAAG - ATGGGTCGGTTGGTGGTGCGT) on contig 15 (3712591 nt) Astart:1717503 Aend:1717524 Bstart:1730515 Bend:1730536 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282962, end:282983) B=2196 nt (start:1143, end:1122) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12526, end:12505) A=91302 nt (start:11667, end:11646) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282427, end:282448) B=2196 nt (start:608, end:587) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2695, end:2716) A=258385 nt (start:1231, end:1210) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:134838, end:134859) B=15068 nt (start:2838, end:2859) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:134843, end:134864) B=15068 nt (start:2833, end:2854) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#103 -> -87847 <- tig#r.125, A=211876 nt (start:104640, end:104661) B=54013 nt (start:53402, end:53423) CALCULATED DISTANCE APART: -87847 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#34 -> -1056103 <- tig#r.65, A=1705564 nt (start:662556, end:662577) B=286124 nt (start:253029, end:253050) CALCULATED DISTANCE APART: -1056103 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260522, end:2260543) B=356404 nt (start:342702, end:342723) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.22 -> -475626 <- tig#55, B=1636463 nt (start:338823, end:338802) A=265143 nt (start:156803, end:156782) CALCULATED DISTANCE APART: -475626 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCGTTGAGGTTTTAGAACGTT - GTATTGAACACTAAGATATTA) on contig 1 (4853111 nt) Astart:346585 Aend:346606 Bstart:391862 Bend:391841 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282422, end:282443) B=2196 nt (start:603, end:582) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TGTTTTCCGGCGTATAGGCCC - CATTTTTCATTTGTATTCTTA) on contig 15 (3712591 nt) Astart:1717638 Aend:1717659 Bstart:1730380 Bend:1730401 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459784, end:459763) A=1345436 nt (start:25876, end:25855) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#125 -> -34982 <- tig#r.7, A=54013 nt (start:8631, end:8652) B=3534247 nt (start:3524647, end:3524668) CALCULATED DISTANCE APART: -34982 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260497, end:2260518) B=356404 nt (start:342727, end:342748) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTTTCAAGATTTGGTAATGAC - AGAAAGAAATACTTAGCGTAA) on contig 5 (3689108 nt) Astart:1178657 Aend:1178636 Bstart:1163523 Bend:1163544 CALCULATED DISTANCE APART: 15134 Pairs unsatisfied in distance within a contig. Pair (TGATTTACTCTTGTGTTTTCT - GTAGGTTACCGTTTCAGCCGG) on contig 2 (5014909 nt) Astart:1268701 Aend:1268722 Bstart:1283363 Bend:1283342 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#34 -> -6318 <- tig#r.132, A=1705564 nt (start:1679286, end:1679307) B=34686 nt (start:34646, end:34667) CALCULATED DISTANCE APART: -6318 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTCTCAGGAGTCTAAGCTAAT - TCAAATAAATATCGATGTTAA) on contig 15 (3712591 nt) Astart:1719028 Aend:1719049 Bstart:1728990 Bend:1729011 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#7 -> -3853079 <- tig#36, A=3534247 nt (start:146084, end:146105) B=855454 nt (start:484916, end:484895) CALCULATED DISTANCE APART: -3853079 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGTTCTCTCTTTTTTTTAATA - GCCGATGCATTATCCCGAAGG) on contig 30 (1050452 nt) Astart:650239 Aend:650260 Bstart:666005 Bend:665984 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.15 -> -3863647 <- tig#1, B=3712591 nt (start:1966242, end:1966221) A=4853111 nt (start:1917405, end:1917384) CALCULATED DISTANCE APART: -3863647 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282002, end:282023) B=2196 nt (start:183, end:162) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.114 -> -31400 <- tig#135, B=54818 nt (start:17438, end:17417) A=39094 nt (start:33962, end:33941) CALCULATED DISTANCE APART: -31400 < -2000 Pairs unsatisfied in distance within a contig. Pair (CAAAGCTCTAGGTGTTAGTTT - TTTTGGAAGGATGTCACAAGT) on contig 6 (6870868 nt) Astart:1138424 Aend:1138403 Bstart:1129997 Bend:1130018 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -414175 <- tig#43, B=1135475 nt (start:825391, end:825412) A=1235946 nt (start:124091, end:124070) CALCULATED DISTANCE APART: -414175 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -1168778 <- tig#384, A=5070776 nt (start:3882305, end:3882326) B=1359 nt (start:307, end:286) CALCULATED DISTANCE APART: -1168778 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#6 -> -3712398 <- tig#1, A=6870868 nt (start:5007462, end:5007483) B=4853111 nt (start:1868992, end:1868971) CALCULATED DISTANCE APART: -3712398 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#36 -> -228778 <- tig#r.41, A=855454 nt (start:790510, end:790531) B=667251 nt (start:483417, end:483438) CALCULATED DISTANCE APART: -228778 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16510, end:16489) A=1227811 nt (start:7305, end:7284) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#77 -> -122338 <- tig#99, B=160344 nt (start:25189, end:25210) A=88102 nt (start:7183, end:7162) CALCULATED DISTANCE APART: -122338 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219421, end:4219400) A=2598 nt (start:2200, end:2179) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.86 -> -194409 <- tig#49, B=280231 nt (start:170252, end:170231) A=399963 nt (start:44157, end:44136) CALCULATED DISTANCE APART: -194409 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#46 -> -3144174 <- tig#12, B=577887 nt (start:138222, end:138243) A=2766197 nt (start:2724509, end:2724488) CALCULATED DISTANCE APART: -3144174 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#39 -> -2984839 <- tig#12, B=736718 nt (start:457323, end:457344) A=2766197 nt (start:2725444, end:2725423) CALCULATED DISTANCE APART: -2984839 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CAAGTTCTTTTCGTTATTTTT - CCTCGCCGGGGGCTTTCAGTT) on contig 15 (3712591 nt) Astart:1719313 Aend:1719334 Bstart:1728705 Bend:1728726 Pairs unsatisfied in pairing logic within a contig. Pair (GTGACTTTTATTTTTTAATTA - TCCCAAATCCATTGCTCTCCA) on contig 19 (3531543 nt) Astart:3059911 Aend:3059890 Bstart:3048812 Bend:3048791 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082432, end:2082453) B=976128 nt (start:961090, end:961111) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in distance within a contig. Pair (AATATGACTATTTGATCATAT - GAGATCATTTGAAGTGGAAAG) on contig 6 (6870868 nt) Astart:1138099 Aend:1138078 Bstart:1129672 Bend:1129693 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#34 -> -1107961 <- tig#79, A=1705564 nt (start:661436, end:661457) B=136600 nt (start:83833, end:83812) CALCULATED DISTANCE APART: -1107961 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCGGTCATCACTAAAGGCTAA - TGCACTCTGCTTTTCTCTTAA) on contig 6 (6870868 nt) Astart:1137949 Aend:1137928 Bstart:1129522 Bend:1129543 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219181, end:4219160) A=2598 nt (start:2440, end:2419) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135958, end:135979) B=15068 nt (start:1718, end:1739) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AACGTCGCAAACGCCGGTGTG - TCACAACGACAACGTACGTTC) on contig 15 (3712591 nt) Astart:1718558 Aend:1718579 Bstart:1729460 Bend:1729481 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#114 -> -21780 <- tig#r.213, A=54818 nt (start:17414, end:17435) B=5391 nt (start:1015, end:1036) CALCULATED DISTANCE APART: -21780 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.47 -> -199642 <- tig#2, B=471458 nt (start:121986, end:121965) A=5014909 nt (start:97656, end:97635) CALCULATED DISTANCE APART: -199642 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#29 -> -579824 <- tig#28, A=1463708 nt (start:1144305, end:1144326) B=1171658 nt (start:280421, end:280400) CALCULATED DISTANCE APART: -579824 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CTTACATGAGAATTCGCATGG - ACTCAAACGCCGGAGTTAAGT) on contig 6 (6870868 nt) Astart:2439928 Aend:2439949 Bstart:2446765 Bend:2446786 Pairs unsatisfied in distance within a contig. Pair (GATTCCAACCTCCAAAAGCCC - TACAGTATTTAAAAAAATATC) on contig 14 (2271162 nt) Astart:1538031 Aend:1538052 Bstart:2003524 Bend:2003503 CALCULATED DISTANCE APART: 465493 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185799, end:4185778) A=3712591 nt (start:762, end:741) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#1 -> -4220727 <- tig#r.10, A=4853111 nt (start:1841144, end:1841165) B=3047199 nt (start:1818439, end:1818460) CALCULATED DISTANCE APART: -4220727 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#38 -> -1000456 <- tig#78, B=1143067 nt (start:253082, end:253103) A=184063 nt (start:130471, end:130450) CALCULATED DISTANCE APART: -1000456 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136118, end:136139) B=15068 nt (start:1558, end:1579) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATATACAATTCACATCAAAAT - TTCAAAATGTAATTATAATGA) on contig 37 (853709 nt) Astart:838659 Aend:838638 Bstart:823154 Bend:823175 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#54 -> -328165 <- tig#r.53, A=625914 nt (start:323462, end:323483) B=354284 nt (start:308571, end:308592) CALCULATED DISTANCE APART: -328165 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:281922, end:281943) B=2196 nt (start:103, end:82) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459599, end:459578) A=1345436 nt (start:26061, end:26040) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AACATTTTGTTAACTATGGTA - TCTTGCTAGATTTAAGGAAAC) on contig 15 (3712591 nt) Astart:1719188 Aend:1719209 Bstart:1728830 Bend:1728851 Pairs unsatisfied in distance within a contig. Pair (CAGTTATGTAATATCCATAAA - AGCAATTTCCCTAACTTCCTT) on contig 1 (4853111 nt) Astart:345721 Aend:345742 Bstart:390987 Bend:390966 CALCULATED DISTANCE APART: 45266 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.74 -> -1813119 <- tig#17, B=238371 nt (start:59066, end:59045) A=1959065 nt (start:1774053, end:1774032) CALCULATED DISTANCE APART: -1813119 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2295, end:2316) A=258385 nt (start:831, end:810) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAAGGCCCAAATACGTGAAGA - AGAGATCTTCTTAAAGGCCTA) on contig 1 (4853111 nt) Astart:346010 Aend:346031 Bstart:391287 Bend:391266 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136353, end:136374) B=15068 nt (start:1323, end:1344) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#120 -> -1341555 <- tig#29, B=44710 nt (start:44316, end:44337) A=1463708 nt (start:1361161, end:1361140) CALCULATED DISTANCE APART: -1341555 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#4 -> -7436980 <- tig#r.8, A=3837743 nt (start:690681, end:690702) B=5070776 nt (start:760858, end:760879) CALCULATED DISTANCE APART: -7436980 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#26 -> -90650 <- tig#95, B=1332708 nt (start:1310398, end:1310419) A=92653 nt (start:88340, end:88319) CALCULATED DISTANCE APART: -90650 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -414175 <- tig#43, B=1135475 nt (start:825386, end:825407) A=1235946 nt (start:124086, end:124065) CALCULATED DISTANCE APART: -414175 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#265 -> -3126344 <- tig#4, A=1946 nt (start:1606, end:1627) B=3837743 nt (start:3146004, end:3145983) CALCULATED DISTANCE APART: -3126344 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.521 -> -380132 <- tig#39, B=1100 nt (start:222, end:201) A=736718 nt (start:399910, end:399889) CALCULATED DISTANCE APART: -380132 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33879, end:33858) A=855454 nt (start:18570, end:18549) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#14 -> -765455 <- tig#43, B=2271162 nt (start:2082914, end:2082935) A=1235946 nt (start:597207, end:597186) CALCULATED DISTANCE APART: -765455 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#71 -> -88433 <- tig#521, A=271268 nt (start:163572, end:163593) B=1100 nt (start:737, end:716) CALCULATED DISTANCE APART: -88433 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CCTTTGGTCGCTTTGAGGTGG - AATAAGTTGACAAATCAAGAT) on contig 14 (2271162 nt) Astart:658506 Aend:658485 Bstart:495405 Bend:495384 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#46 -> -3144173 <- tig#12, B=577887 nt (start:138728, end:138749) A=2766197 nt (start:2725014, end:2724993) CALCULATED DISTANCE APART: -3144173 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GCTAAACCATAGTAACTGTTT - GGCCCTAGTAATTTTTGAAAG) on contig 19 (3531543 nt) Astart:3058223 Aend:3058202 Bstart:3050497 Bend:3050476 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#127 -> -57440 <- tig#17, B=80830 nt (start:63205, end:63226) A=1959065 nt (start:59815, end:59794) CALCULATED DISTANCE APART: -57440 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#22 -> -1607592 <- tig#31, A=1636463 nt (start:180494, end:180515) B=976128 nt (start:171623, end:171602) CALCULATED DISTANCE APART: -1607592 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#48 -> -127298 <- tig#r.65, A=487359 nt (start:470365, end:470386) B=286124 nt (start:155820, end:155841) CALCULATED DISTANCE APART: -127298 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGTCTTGAATAATGTTGAGTT - TGATCCAACATGTTTAACTTT) on contig 37 (853709 nt) Astart:538502 Aend:538523 Bstart:551175 Bend:551154 CALCULATED DISTANCE APART: 12673 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#51 -> -2153373 <- tig#5, B=875428 nt (start:195187, end:195208) A=3689108 nt (start:1493132, end:1493111) CALCULATED DISTANCE APART: -2153373 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#52 -> -355614 <- tig#3, B=356404 nt (start:107, end:128) A=3889482 nt (start:19317, end:19296) CALCULATED DISTANCE APART: -355614 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AAAATAGAAACAGAACTCCTT - ACTTTCAGCCGTTTCAGTCGT) on contig 4 (3837743 nt) Astart:2358326 Aend:2358347 Bstart:2359736 Bend:2359757 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17450, end:17429) A=1227811 nt (start:6365, end:6344) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#65 -> -1239086 <- tig#33, A=286124 nt (start:256575, end:256596) B=1290487 nt (start:1229537, end:1229516) CALCULATED DISTANCE APART: -1239086 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#9 -> -3369808 <- tig#22, A=3747885 nt (start:358128, end:358149) B=1636463 nt (start:51, end:30) CALCULATED DISTANCE APART: -3369808 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.42 -> -1433157 <- tig#20, B=659641 nt (start:2258, end:2237) A=2328057 nt (start:1450899, end:1450878) CALCULATED DISTANCE APART: -1433157 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135548, end:135569) B=15068 nt (start:2128, end:2149) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -322558 <- tig#r.572, A=2650694 nt (start:2308805, end:2308826) B=1031 nt (start:362, end:383) CALCULATED DISTANCE APART: -322558 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGGCGGCGGCATAATGGGAGG - GGTTTGGATCACTCTTCCACA) on contig 5 (3689108 nt) Astart:1169732 Aend:1169753 Bstart:1184867 Bend:1184846 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig. Pair (TTAACTTCTATTTTCTTATAA - TATCAATCTATGGAGTGTATG) on contig 34 (1705564 nt) Astart:679629 Aend:679608 Bstart:664666 Bend:664687 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#265 -> -3126344 <- tig#4, A=1946 nt (start:1721, end:1742) B=3837743 nt (start:3146119, end:3146098) CALCULATED DISTANCE APART: -3126344 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460504, end:460483) A=1345436 nt (start:25156, end:25135) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CTTATCATCGCAGGCAAACAA - CGAAAATAAAATTGTTTGAAA) on contig 15 (3712591 nt) Astart:1792116 Aend:1792095 Bstart:2056177 Bend:2056198 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -1335675 <- tig#4, B=3747885 nt (start:2858747, end:2858768) A=3837743 nt (start:466537, end:466516) CALCULATED DISTANCE APART: -1335675 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082677, end:2082698) B=976128 nt (start:960845, end:960866) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAGATTTGGTAATGACTAATG - GAGAGAGAAAGAAATACTTAG) on contig 5 (3689108 nt) Astart:1178652 Aend:1178631 Bstart:1163518 Bend:1163539 CALCULATED DISTANCE APART: 15134 Pairs unsatisfied in distance within a contig. Pair (AGGTTCTTGATAATGAACTTA - CTGTGTAAACTGTTGCGAAAC) on contig 2 (5014909 nt) Astart:1270031 Aend:1270052 Bstart:1284693 Bend:1284672 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.6 -> -5416206 <- tig#35, B=6870868 nt (start:4671640, end:4671619) A=1135475 nt (start:764566, end:764545) CALCULATED DISTANCE APART: -5416206 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#12 -> -2463577 <- tig#29, A=2766197 nt (start:1237464, end:1237485) B=1463708 nt (start:954844, end:954823) CALCULATED DISTANCE APART: -2463577 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136058, end:136079) B=15068 nt (start:1618, end:1639) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#127 -> -717436 <- tig#r.33, A=80830 nt (start:20211, end:20232) B=1290487 nt (start:613670, end:613691) CALCULATED DISTANCE APART: -717436 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.328 -> -54701 <- tig#102, B=1508 nt (start:1401, end:1380) A=83426 nt (start:73300, end:73279) CALCULATED DISTANCE APART: -54701 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2261082, end:2261103) B=356404 nt (start:342142, end:342163) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#77 -> -132351 <- tig#118, B=160344 nt (start:13302, end:13323) A=66247 nt (start:5309, end:5288) CALCULATED DISTANCE APART: -132351 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082672, end:2082693) B=976128 nt (start:960850, end:960871) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CGGAGGAGCCAACGTCGCAAA - AACGTACGTTCTCGTTTATTA) on contig 15 (3712591 nt) Astart:1718548 Aend:1718569 Bstart:1729470 Bend:1729491 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#14 -> -765455 <- tig#43, B=2271162 nt (start:2082924, end:2082945) A=1235946 nt (start:597217, end:597196) CALCULATED DISTANCE APART: -765455 < -2000 Pairs unsatisfied in distance within a contig. Pair (GCCAGAAAGTTGGTATTTTCT - TAACTTTATTGATGTCGTCTT) on contig 37 (853709 nt) Astart:838394 Aend:838373 Bstart:822889 Bend:822910 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -4201 <- tig#r.96, A=262460 nt (start:244406, end:244427) B=91302 nt (start:85155, end:85176) CALCULATED DISTANCE APART: -4201 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730082, end:730103) B=3531543 nt (start:3199656, end:3199635) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:134763, end:134784) B=15068 nt (start:2913, end:2934) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4186214, end:4186193) A=3712591 nt (start:347, end:326) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CCATGCGATGGGACCATTGTA - TTATGATGAGAGAACTTAGCT) on contig 15 (3712591 nt) Astart:1717953 Aend:1717974 Bstart:1730065 Bend:1730086 Pairs unsatisfied in distance within a contig. Pair (CCGGCTTTGGTTTGGTCATTA - TGAAGAGAAGAGGAATGAGGC) on contig 15 (3712591 nt) Astart:3349960 Aend:3349981 Bstart:3374948 Bend:3374927 CALCULATED DISTANCE APART: 24988 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.257 -> -2902765 <- tig#8, B=1995 nt (start:1356, end:1335) A=5070776 nt (start:2921409, end:2921388) CALCULATED DISTANCE APART: -2902765 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#38 -> -3178666 <- tig#7, A=1143067 nt (start:493387, end:493408) B=3534247 nt (start:2548986, end:2548965) CALCULATED DISTANCE APART: -3178666 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#48 -> -455296 <- tig#387, B=487359 nt (start:12505, end:12526) A=1354 nt (start:442, end:421) CALCULATED DISTANCE APART: -455296 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AAGCGAGTTGATTTACCGGCG - TACAAATTGAAATAATACAAT) on contig 15 (3712591 nt) Astart:1718678 Aend:1718699 Bstart:1729340 Bend:1729361 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#34 -> -1107957 <- tig#79, A=1705564 nt (start:661621, end:661642) B=136600 nt (start:84014, end:83993) CALCULATED DISTANCE APART: -1107957 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#19 -> -1649636 <- tig#31, A=3531543 nt (start:1878102, end:1878123) B=976128 nt (start:16195, end:16174) CALCULATED DISTANCE APART: -1649636 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATTTTGAGAAGATGTGGGGAT - CTCTAATTATGGCGGAATGAG) on contig 71 (271268 nt) Astart:124119 Aend:124098 Bstart:118751 Bend:118772 CALCULATED DISTANCE APART: 5368 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.1 -> -4590180 <- tig#16, B=4853111 nt (start:3208542, end:3208521) A=2098954 nt (start:1401638, end:1401617) CALCULATED DISTANCE APART: -4590180 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#74 -> -258226 <- tig#56, B=238371 nt (start:59016, end:59037) A=262460 nt (start:98871, end:98850) CALCULATED DISTANCE APART: -258226 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#265 -> -3126344 <- tig#4, A=1946 nt (start:1541, end:1562) B=3837743 nt (start:3145939, end:3145918) CALCULATED DISTANCE APART: -3126344 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATATTTTAATAAGCATTAACA - TGGAAGAGGTTCTTGCAAACA) on contig 109 (66564 nt) Astart:5889 Aend:5868 Bstart:253 Bend:274 CALCULATED DISTANCE APART: 5636 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#19 -> -2095240 <- tig#5, B=3531543 nt (start:1923448, end:1923469) A=3689108 nt (start:507145, end:507124) CALCULATED DISTANCE APART: -2095240 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CTCATACTTTCCACATTGCTT - TACCTCTCAGGTCGAGCTTTC) on contig 9 (3747885 nt) Astart:2878239 Aend:2878218 Bstart:2862926 Bend:2862905 Pairs unsatisfied in pairing logic within a contig. Pair (AATATTTTTGTGGATTTCTAT - TTAAGAAATGTTTTCATTTGA) on contig 32 (972151 nt) Astart:760943 Aend:760964 Bstart:525989 Bend:526010 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730887, end:730908) B=3531543 nt (start:3200461, end:3200440) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig. Pair (GGTTTAAGTTGTTATACTCAA - TTGAGTATAACAACTTAAACC) on contig 84 (197079 nt) Astart:196823 Aend:196802 Bstart:196802 Bend:196823 CALCULATED DISTANCE APART: 21 Pairs unsatisfied in distance within a contig. Pair (GGTTTAAGTTGTTATACTCAA - ATGATTGAGTATAACAACTTA) on contig 84 (197079 nt) Astart:196823 Aend:196802 Bstart:196798 Bend:196819 CALCULATED DISTANCE APART: 25 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282027, end:282048) B=2196 nt (start:208, end:187) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730697, end:730718) B=3531543 nt (start:3200271, end:3200250) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCGTTAACAAGAAGCAAGAAC - TACCAGGATCAGCGAATAATA) on contig 5 (3689108 nt) Astart:1171882 Aend:1171903 Bstart:1187018 Bend:1186997 CALCULATED DISTANCE APART: 15136 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.28 -> -4041595 <- tig#8, B=1171658 nt (start:689921, end:689900) A=5070776 nt (start:3371674, end:3371653) CALCULATED DISTANCE APART: -4041595 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.257 -> -2902765 <- tig#8, B=1995 nt (start:1676, end:1655) A=5070776 nt (start:2921089, end:2921068) CALCULATED DISTANCE APART: -2902765 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.328 -> -54701 <- tig#102, B=1508 nt (start:1256, end:1235) A=83426 nt (start:73445, end:73424) CALCULATED DISTANCE APART: -54701 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGAGCATACACTCAACGATTT - AGATTATTTTTTATTTACCAT) on contig 19 (3531543 nt) Astart:1348199 Aend:1348178 Bstart:1311054 Bend:1311075 CALCULATED DISTANCE APART: 37145 Pairs unsatisfied in pairing logic within a contig. Pair (AGAGCTTCATCAAGCAGTTCG - TTGCTTTAGATAGAAGTAGAC) on contig 15 (3712591 nt) Astart:1717318 Aend:1717339 Bstart:1730700 Bend:1730721 Pairs unsatisfied in pairing logic within a contig. Pair (AGTTGTATCCGCCCGTCATGT - CAAACAAATAAAAAAAGGTTG) on contig 14 (2271162 nt) Astart:658416 Aend:658395 Bstart:495495 Bend:495474 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3582 <- tig#26, B=1171658 nt (start:1170964, end:1170985) A=1332708 nt (start:22888, end:22867) CALCULATED DISTANCE APART: -3582 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135673, end:135694) B=15068 nt (start:2003, end:2024) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAAGTTGGTATTTTCTTAAAC - CCTAATAACTTTATTGATGTC) on contig 37 (853709 nt) Astart:838389 Aend:838368 Bstart:822884 Bend:822905 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#77 -> -122338 <- tig#99, B=160344 nt (start:25119, end:25140) A=88102 nt (start:7113, end:7092) CALCULATED DISTANCE APART: -122338 < -2000 Pairs unsatisfied in distance within a contig. Pair (GGATACAATTCTTACGCCTTT - ATCTTAAAGGCGTAAGAATTG) on contig 34 (1705564 nt) Astart:1679300 Aend:1679279 Bstart:1679274 Bend:1679295 CALCULATED DISTANCE APART: 26 Pairs unsatisfied in pairing logic within a contig. Pair (GTTTAATATTGGTTTACATCA - CTTGTTGTTATAAATATTGAG) on contig 51 (875428 nt) Astart:133681 Aend:133660 Bstart:867765 Bend:867744 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3583 <- tig#26, B=1171658 nt (start:1171203, end:1171224) A=1332708 nt (start:23128, end:23107) CALCULATED DISTANCE APART: -3583 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#92 -> -2121566 <- tig#16, B=101136 nt (start:3378, end:3399) A=2098954 nt (start:2043808, end:2043787) CALCULATED DISTANCE APART: -2121566 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459324, end:459303) A=1345436 nt (start:26336, end:26315) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#12 -> -245456 <- tig#56, B=2766197 nt (start:2696551, end:2696572) A=262460 nt (start:195810, end:195789) CALCULATED DISTANCE APART: -245456 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#22 -> -6369342 <- tig#6, B=1636463 nt (start:14565, end:14586) A=6870868 nt (start:4767444, end:4767423) CALCULATED DISTANCE APART: -6369342 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33494, end:33473) A=855454 nt (start:18955, end:18934) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.32 -> -889372 <- tig#17, B=972151 nt (start:418903, end:418882) A=1959065 nt (start:490469, end:490448) CALCULATED DISTANCE APART: -889372 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#43 -> -1055899 <- tig#67, B=1235946 nt (start:225081, end:225102) A=197815 nt (start:65034, end:65013) CALCULATED DISTANCE APART: -1055899 < -2000 Pairs unsatisfied in distance within a contig. Pair (CAAAAATGGCATATGAAGATA - TGGCGATCAATCAAGAAACAA) on contig 2 (5014909 nt) Astart:1269661 Aend:1269682 Bstart:1284323 Bend:1284302 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#22 -> -6369340 <- tig#6, B=1636463 nt (start:14767, end:14788) A=6870868 nt (start:4767644, end:4767623) CALCULATED DISTANCE APART: -6369340 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.6 -> -4769564 <- tig#49, B=6870868 nt (start:4746019, end:4745998) A=399963 nt (start:43545, end:43524) CALCULATED DISTANCE APART: -4769564 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.34 -> -1904715 <- tig#30, B=1705564 nt (start:1210699, end:1210678) A=1050452 nt (start:714016, end:713995) CALCULATED DISTANCE APART: -1904715 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGGAGACCAGCTCCTCAAGTT - AAGCATCATGCGATCTGGGTA) on contig 4 (3837743 nt) Astart:1822719 Aend:1822698 Bstart:1799644 Bend:1799665 CALCULATED DISTANCE APART: 23075 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#46 -> -2095457 <- tig#16, A=577887 nt (start:505855, end:505876) B=2098954 nt (start:2043425, end:2043404) CALCULATED DISTANCE APART: -2095457 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGAAGATTGTGAGTCCTTGGA - CATACAAGAGAGCTAGCTTAC) on contig 6 (6870868 nt) Astart:4411859 Aend:4411880 Bstart:4445813 Bend:4445792 CALCULATED DISTANCE APART: 33954 Pairs unsatisfied in pairing logic within a contig. Pair (AGTTGATTTACCGGCGGCGGA - CTTATTACAAATTGAAATAAT) on contig 15 (3712591 nt) Astart:1718683 Aend:1718704 Bstart:1729335 Bend:1729356 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -3661475 <- tig#r.3, A=262460 nt (start:68594, end:68615) B=3889482 nt (start:401873, end:401894) CALCULATED DISTANCE APART: -3661475 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#11 -> -4257877 <- tig#r.48, A=4628067 nt (start:450542, end:450563) B=487359 nt (start:387007, end:387028) CALCULATED DISTANCE APART: -4257877 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATTAATCAATTTTTGATATAT - ACGATAATAAATAAGATTAAA) on contig 19 (3531543 nt) Astart:3059391 Aend:3059370 Bstart:3049332 Bend:3049311 Pairs unsatisfied in distance within a contig. Pair (ACGAAAAACAGAATCGACGTA - TTGATTACTGTATTTGTTACT) on contig 5 (3689108 nt) Astart:1170197 Aend:1170218 Bstart:1185332 Bend:1185311 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.25 -> -1123940 <- tig#98, B=1290536 nt (start:1121801, end:1121780) A=88184 nt (start:22139, end:22118) CALCULATED DISTANCE APART: -1123940 < -2000 Pairs unsatisfied in distance within a contig. Pair (GGAAAAAACAAAAACCCAGAT - AAGTGTATTTCACAAAATCTT) on contig 6 (6870868 nt) Astart:1138019 Aend:1137998 Bstart:1129592 Bend:1129613 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#125 -> -23921 <- tig#r.129, A=54013 nt (start:10174, end:10195) B=39603 nt (start:39521, end:39542) CALCULATED DISTANCE APART: -23921 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#36 -> -64204 <- tig#94, A=855454 nt (start:790195, end:790216) B=93323 nt (start:18945, end:18924) CALCULATED DISTANCE APART: -64204 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#22 -> -1615678 <- tig#20, B=1636463 nt (start:10981, end:11002) A=2328057 nt (start:10196, end:10175) CALCULATED DISTANCE APART: -1615678 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#127 -> -57440 <- tig#17, B=80830 nt (start:63295, end:63316) A=1959065 nt (start:59905, end:59884) CALCULATED DISTANCE APART: -57440 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#43 -> -1009149 <- tig#73, B=1235946 nt (start:225791, end:225812) A=171056 nt (start:18994, end:18973) CALCULATED DISTANCE APART: -1009149 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#342 -> -576943 <- tig#43, B=1467 nt (start:1336, end:1357) A=1235946 nt (start:596812, end:596791) CALCULATED DISTANCE APART: -576943 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ACAAATTCTTCGAAATTATAG - CATGAAATAGCTCGGGTCTTT) on contig 19 (3531543 nt) Astart:3058343 Aend:3058322 Bstart:3050377 Bend:3050356 Pairs unsatisfied in pairing logic within a contig. Pair (GAGAATAGGAATATAACTGGA - TTGGAGGGTTCTATTTATAGC) on contig 15 (3712591 nt) Astart:1717878 Aend:1717899 Bstart:1730140 Bend:1730161 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#28 -> -1362300 <- tig#r.12, A=1171658 nt (start:256461, end:256482) B=2766197 nt (start:2299094, end:2299115) CALCULATED DISTANCE APART: -1362300 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTTAAGTTGTTATACTCAATC - TGATTGAGTATAACAACTTAA) on contig 84 (197079 nt) Astart:196821 Aend:196800 Bstart:196799 Bend:196820 CALCULATED DISTANCE APART: 22 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.7 -> -3574109 <- tig#38, B=3534247 nt (start:2548541, end:2548520) A=1143067 nt (start:1045568, end:1045547) CALCULATED DISTANCE APART: -3574109 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#31 -> -496427 <- tig#41, B=976128 nt (start:946370, end:946391) A=667251 nt (start:486669, end:486648) CALCULATED DISTANCE APART: -496427 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#64 -> -218030 <- tig#r.139, A=211265 nt (start:17, end:38) B=27696 nt (start:914, end:935) CALCULATED DISTANCE APART: -218030 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4186219, end:4186198) A=3712591 nt (start:342, end:321) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#103 -> -259870 <- tig#r.48, A=211876 nt (start:14014, end:14035) B=487359 nt (start:405351, end:405372) CALCULATED DISTANCE APART: -259870 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGTTCGTCACGCAGGTAAGGC - ATGTTTATGTGAATCTTGCTT) on contig 15 (3712591 nt) Astart:1717333 Aend:1717354 Bstart:1730685 Bend:1730706 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.409 -> -1019852 <- tig#23, B=1303 nt (start:686, end:665) A=1345436 nt (start:1039166, end:1039145) CALCULATED DISTANCE APART: -1019852 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#3 -> -3618470 <- tig#27, B=3889482 nt (start:316579, end:316600) A=1227811 nt (start:65567, end:65546) CALCULATED DISTANCE APART: -3618470 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#48 -> -449949 <- tig#78, A=487359 nt (start:152710, end:152731) B=184063 nt (start:135300, end:135279) CALCULATED DISTANCE APART: -449949 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CAAACAAATCGAAGGGTCAAG - TGTGGTTGAGACAAGAAGGAT) on contig 15 (3712591 nt) Astart:1716768 Aend:1716789 Bstart:1731250 Bend:1731271 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.521 -> -111709 <- tig#63, B=1100 nt (start:687, end:666) A=274372 nt (start:131022, end:131001) CALCULATED DISTANCE APART: -111709 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#11 -> -4352558 <- tig#79, A=4628067 nt (start:266722, end:266743) B=136600 nt (start:11213, end:11192) CALCULATED DISTANCE APART: -4352558 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.1 -> -4590186 <- tig#16, B=4853111 nt (start:3207967, end:3207946) A=2098954 nt (start:1402219, end:1402198) CALCULATED DISTANCE APART: -4590186 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#9 -> -3401512 <- tig#r.107, A=3747885 nt (start:358038, end:358059) B=68734 nt (start:37069, end:37090) CALCULATED DISTANCE APART: -3401512 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16180, end:16159) A=1227811 nt (start:7635, end:7614) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -322558 <- tig#r.572, A=2650694 nt (start:2308885, end:2308906) B=1031 nt (start:282, end:303) CALCULATED DISTANCE APART: -322558 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185969, end:4185948) A=3712591 nt (start:592, end:571) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGCTCTAAAGTGAAATGTGTT - CAATTAAGCTCCTTGATGGAG) on contig 19 (3531543 nt) Astart:3059596 Aend:3059575 Bstart:3049127 Bend:3049106 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:1700, end:1721) A=258385 nt (start:236, end:215) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#265 -> -3126344 <- tig#4, A=1946 nt (start:1771, end:1792) B=3837743 nt (start:3146169, end:3146148) CALCULATED DISTANCE APART: -3126344 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTTTGATGGAGAAGGAACTTA - CACTCTGCCTCATATTCAGCT) on contig 27 (1227811 nt) Astart:434695 Aend:434716 Bstart:450948 Bend:450927 CALCULATED DISTANCE APART: 16253 Pairs unsatisfied in distance within a contig. Pair (ACCAGAACCAGAATAAAAGGT - TTAGACCAATATTTTCACATA) on contig 13 (2650694 nt) Astart:1947300 Aend:1947321 Bstart:1962948 Bend:1962927 CALCULATED DISTANCE APART: 15648 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#52 -> -353986 <- tig#1, B=356404 nt (start:94, end:115) A=4853111 nt (start:17676, end:17655) CALCULATED DISTANCE APART: -353986 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -201249 <- tig#r.53, A=2766197 nt (start:2558273, end:2558294) B=354284 nt (start:340959, end:340980) CALCULATED DISTANCE APART: -201249 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#453 -> -16426 <- tig#68, A=1197 nt (start:1014, end:1035) B=189499 nt (start:36243, end:36222) CALCULATED DISTANCE APART: -16426 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136113, end:136134) B=15068 nt (start:1563, end:1584) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#53 -> -314811 <- tig#75, B=354284 nt (start:24939, end:24960) A=373953 nt (start:5466, end:5445) CALCULATED DISTANCE APART: -314811 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730167, end:730188) B=3531543 nt (start:3199741, end:3199720) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219076, end:4219055) A=2598 nt (start:2545, end:2524) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GTTAAGAATTCAGTAGTCGAG - GCTATTCATAGGTAATAGGTT) on contig 15 (3712591 nt) Astart:1719088 Aend:1719109 Bstart:1728930 Bend:1728951 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259942, end:2259963) B=356404 nt (start:343282, end:343303) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig. Pair (GATAATGATAGGAAAGACATT - CATTGGTTAGTGGGTTTGGGC) on contig 30 (1050452 nt) Astart:648504 Aend:648525 Bstart:673538 Bend:673517 CALCULATED DISTANCE APART: 25034 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460649, end:460628) A=1345436 nt (start:25011, end:24990) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TAAGATCTCAGTCCATGATTT - TCAGCATATTATTTATGTGTG) on contig 15 (3712591 nt) Astart:1717553 Aend:1717574 Bstart:1730465 Bend:1730486 Pairs unsatisfied in distance within a contig. Pair (TGTCGTTTGAGGTGGTGATTT - TTCACAACTTTACAGGCGTTT) on contig 31 (976128 nt) Astart:41334 Aend:41355 Bstart:68880 Bend:68859 CALCULATED DISTANCE APART: 27546 Pairs unsatisfied in distance within a contig. Pair (GTCTATAAATTAATAAAAATA - TTATGGCTTTAGCTGGTGAAC) on contig 109 (66564 nt) Astart:5664 Aend:5643 Bstart:28 Bend:49 CALCULATED DISTANCE APART: 5636 Pairs unsatisfied in pairing logic within a contig. Pair (TTTAGCTACAATTTTTTATTT - TGGTCTCTTGTTTTAACTTTG) on contig 15 (3712591 nt) Astart:1717418 Aend:1717439 Bstart:1730600 Bend:1730621 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219176, end:4219155) A=2598 nt (start:2445, end:2424) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#10 -> -2837213 <- tig#45, B=3047199 nt (start:393004, end:393025) A=528133 nt (start:203018, end:202997) CALCULATED DISTANCE APART: -2837213 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#1 -> -4815319 <- tig#10, A=4853111 nt (start:1841356, end:1841377) B=3047199 nt (start:1823564, end:1823543) CALCULATED DISTANCE APART: -4815319 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TAAGATTAAAGTCAACCGCCA - ATTCCAAGGAAATAAGTCAAT) on contig 19 (3531543 nt) Astart:3059113 Aend:3059092 Bstart:3049607 Bend:3049586 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.17 -> -1813129 <- tig#74, B=1959065 nt (start:1774041, end:1774020) A=238371 nt (start:59088, end:59067) CALCULATED DISTANCE APART: -1813129 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -1443756 <- tig#r.4, A=2650694 nt (start:2066518, end:2066539) B=3837743 nt (start:2958163, end:2958184) CALCULATED DISTANCE APART: -1443756 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#305 -> -2202335 <- tig#r.19, A=1638 nt (start:37, end:58) B=3531543 nt (start:1310809, end:1310830) CALCULATED DISTANCE APART: -2202335 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#54 -> -556581 <- tig#320, B=625914 nt (start:49561, end:49582) A=1552 nt (start:228, end:207) CALCULATED DISTANCE APART: -556581 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.38 -> -1426766 <- tig#29, B=1143067 nt (start:1039579, end:1039558) A=1463708 nt (start:407187, end:407166) CALCULATED DISTANCE APART: -1426766 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTTAGAGCCATGCAGTTCCGT - TATTATAACATAAACTAATAT) on contig 15 (3712591 nt) Astart:1717093 Aend:1717114 Bstart:1730925 Bend:1730946 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3583 <- tig#26, B=1171658 nt (start:1171538, end:1171559) A=1332708 nt (start:23463, end:23442) CALCULATED DISTANCE APART: -3583 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#86 -> -735496 <- tig#17, B=280231 nt (start:15089, end:15110) A=1959065 nt (start:490354, end:490333) CALCULATED DISTANCE APART: -735496 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CCAGGTAATGATGATAATGTT - CTCCTTTGGGCTTCGCTCATG) on contig 6 (6870868 nt) Astart:2439998 Aend:2440019 Bstart:2446695 Bend:2446716 Pairs unsatisfied in distance within a contig. Pair (AAGAAGTAGAGAGAGTCTGCA - TCACGAACCAAGAAATGAGTA) on contig 1 (4853111 nt) Astart:346480 Aend:346501 Bstart:391757 Bend:391736 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in pairing logic within a contig. Pair (ATGGTCACCAATCACCAATTT - GCAAGGGATATTTCAGTTACC) on contig 19 (3531543 nt) Astart:3058303 Aend:3058282 Bstart:3050417 Bend:3050396 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#33 -> -492044 <- tig#32, A=1290487 nt (start:1235912, end:1235933) B=972151 nt (start:457469, end:457448) CALCULATED DISTANCE APART: -492044 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460274, end:460253) A=1345436 nt (start:25386, end:25365) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#433 -> -944078 <- tig#r.29, A=1238 nt (start:671, end:692) B=1463708 nt (start:500197, end:500218) CALCULATED DISTANCE APART: -944078 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -4201 <- tig#r.96, A=262460 nt (start:244281, end:244302) B=91302 nt (start:85280, end:85301) CALCULATED DISTANCE APART: -4201 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.257 -> -2902765 <- tig#8, B=1995 nt (start:1156, end:1135) A=5070776 nt (start:2921609, end:2921588) CALCULATED DISTANCE APART: -2902765 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGACCCGGTTTTGTTGTATAT - TGTCTTTGACATCTTCTAAGA) on contig 2 (5014909 nt) Astart:1269546 Aend:1269567 Bstart:1284208 Bend:1284187 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#120 -> -1341555 <- tig#29, B=44710 nt (start:44346, end:44367) A=1463708 nt (start:1361191, end:1361170) CALCULATED DISTANCE APART: -1341555 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#49 -> -1152645 <- tig#r.43, A=399963 nt (start:352056, end:352077) B=1235946 nt (start:111208, end:111229) CALCULATED DISTANCE APART: -1152645 < -2000 Pairs unsatisfied in distance within a contig. Pair (GCTGTTTTCATTCATAGAAAG - GATCTAATGTCGACCTATCGT) on contig 5 (3689108 nt) Astart:1169317 Aend:1169338 Bstart:1184452 Bend:1184431 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in pairing logic within a contig. Pair (AAGAACTTGTATGGATAAATA - GCAGTTTTTTTTTACAGCAAA) on contig 19 (3531543 nt) Astart:3059193 Aend:3059172 Bstart:3049527 Bend:3049506 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#5 -> -5542232 <- tig#7, B=3689108 nt (start:381208, end:381229) A=3534247 nt (start:2254332, end:2254311) CALCULATED DISTANCE APART: -5542232 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459214, end:459193) A=1345436 nt (start:26446, end:26425) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082492, end:2082513) B=976128 nt (start:961030, end:961051) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136758, end:136779) B=15068 nt (start:918, end:939) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#9 -> -6907516 <- tig#r.5, A=3747885 nt (start:149288, end:149309) B=3689108 nt (start:360189, end:360210) CALCULATED DISTANCE APART: -6907516 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#3 -> -3661478 <- tig#r.56, A=3889482 nt (start:401871, end:401892) B=262460 nt (start:68593, end:68614) CALCULATED DISTANCE APART: -3661478 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459794, end:459773) A=1345436 nt (start:25866, end:25845) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259627, end:2259648) B=356404 nt (start:343597, end:343618) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTTGGTTTGGTCATTATAGGC - GCGAGTGAAGAGAAGAGGAAT) on contig 15 (3712591 nt) Astart:3349965 Aend:3349986 Bstart:3374953 Bend:3374932 CALCULATED DISTANCE APART: 24988 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.409 -> -1019852 <- tig#23, B=1303 nt (start:691, end:670) A=1345436 nt (start:1039161, end:1039140) CALCULATED DISTANCE APART: -1019852 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282032, end:282053) B=2196 nt (start:213, end:192) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.403 -> -2330792 <- tig#13, B=1321 nt (start:115, end:94) A=2650694 nt (start:2350677, end:2350656) CALCULATED DISTANCE APART: -2330792 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGTGTGTTTTTTAAAAACAGC - TTACCATCCTTGCTATTTTGT) on contig 5 (3689108 nt) Astart:1169497 Aend:1169518 Bstart:1184632 Bend:1184611 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#19 -> -3044633 <- tig#r.72, A=3531543 nt (start:471091, end:471112) B=172011 nt (start:167830, end:167851) CALCULATED DISTANCE APART: -3044633 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -214292 <- tig#6, A=354284 nt (start:134300, end:134321) B=6870868 nt (start:14308, end:14287) CALCULATED DISTANCE APART: -214292 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219556, end:4219535) A=2598 nt (start:2065, end:2044) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGAAAACATTCAACTTTTCTG - AAATCAATGATTCATATCGTT) on contig 4 (3837743 nt) Astart:2358371 Aend:2358392 Bstart:2359691 Bend:2359712 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#48 -> -3151835 <- tig#12, B=487359 nt (start:39093, end:39114) A=2766197 nt (start:2723569, end:2723548) CALCULATED DISTANCE APART: -3151835 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282082, end:282103) B=2196 nt (start:263, end:242) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.91 -> -52889 <- tig#31, B=101959 nt (start:14980, end:14959) A=976128 nt (start:57909, end:57888) CALCULATED DISTANCE APART: -52889 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.257 -> -2902765 <- tig#8, B=1995 nt (start:1586, end:1565) A=5070776 nt (start:2921179, end:2921158) CALCULATED DISTANCE APART: -2902765 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082587, end:2082608) B=976128 nt (start:960935, end:960956) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCTATTTCAAAGCTAATAAAA - AACACTATATTCAAAAGCAGG) on contig 60 (232804 nt) Astart:31327 Aend:31348 Bstart:57605 Bend:57584 CALCULATED DISTANCE APART: 26278 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#305 -> -2202335 <- tig#r.19, A=1638 nt (start:272, end:293) B=3531543 nt (start:1310574, end:1310595) CALCULATED DISTANCE APART: -2202335 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#101 -> -2656718 <- tig#12, A=84691 nt (start:11205, end:11226) B=2766197 nt (start:2603232, end:2603211) CALCULATED DISTANCE APART: -2656718 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#120 -> -1341554 <- tig#29, B=44710 nt (start:43992, end:44013) A=1463708 nt (start:1360836, end:1360815) CALCULATED DISTANCE APART: -1341554 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#37 -> -738474 <- tig#r.53, A=853709 nt (start:109355, end:109376) B=354284 nt (start:340164, end:340185) CALCULATED DISTANCE APART: -738474 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#19 -> -1649636 <- tig#31, A=3531543 nt (start:1878737, end:1878758) B=976128 nt (start:16830, end:16809) CALCULATED DISTANCE APART: -1649636 < -2000 Pairs unsatisfied in distance within a contig. Pair (GTCATTGTAGAGAACATAAAC - CTCTTTATCTGATGTAGTACA) on contig 123 (42452 nt) Astart:14641 Aend:14620 Bstart:1509 Bend:1530 CALCULATED DISTANCE APART: 13132 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#33 -> -492044 <- tig#32, A=1290487 nt (start:1236057, end:1236078) B=972151 nt (start:457614, end:457593) CALCULATED DISTANCE APART: -492044 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#9 -> -3369808 <- tig#22, A=3747885 nt (start:358183, end:358204) B=1636463 nt (start:106, end:85) CALCULATED DISTANCE APART: -3369808 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728223, end:728244) A=1096 nt (start:308, end:287) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -1335763 <- tig#4, B=3747885 nt (start:2857677, end:2857698) A=3837743 nt (start:465555, end:465534) CALCULATED DISTANCE APART: -1335763 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.20 -> -2413469 <- tig#37, B=2328057 nt (start:2055430, end:2055409) A=853709 nt (start:378039, end:378018) CALCULATED DISTANCE APART: -2413469 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#87 -> -40904 <- tig#387, B=109083 nt (start:48256, end:48277) A=1354 nt (start:77, end:56) CALCULATED DISTANCE APART: -40904 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#49 -> -1152645 <- tig#r.43, A=399963 nt (start:351721, end:351742) B=1235946 nt (start:111543, end:111564) CALCULATED DISTANCE APART: -1152645 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#22 -> -1615678 <- tig#20, B=1636463 nt (start:10971, end:10992) A=2328057 nt (start:10186, end:10165) CALCULATED DISTANCE APART: -1615678 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17135, end:17114) A=1227811 nt (start:6680, end:6659) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#6 -> -40186 <- tig#91, A=6870868 nt (start:6827637, end:6827658) B=101959 nt (start:16955, end:16934) CALCULATED DISTANCE APART: -40186 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -1443756 <- tig#r.4, A=2650694 nt (start:2066503, end:2066524) B=3837743 nt (start:2958178, end:2958199) CALCULATED DISTANCE APART: -1443756 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TATCTGAATTTCAAACGGAAT - GTCTGCACTCTGCAATATCGT) on contig 19 (3531543 nt) Astart:3058783 Aend:3058762 Bstart:3049937 Bend:3049916 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#39 -> -522825 <- tig#r.32, A=736718 nt (start:483788, end:483809) B=972151 nt (start:682256, end:682277) CALCULATED DISTANCE APART: -522825 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#433 -> -944078 <- tig#r.29, A=1238 nt (start:816, end:837) B=1463708 nt (start:500052, end:500073) CALCULATED DISTANCE APART: -944078 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#39 -> -500696 <- tig#r.30, A=736718 nt (start:679351, end:679372) B=1050452 nt (start:587123, end:587144) CALCULATED DISTANCE APART: -500696 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460564, end:460543) A=1345436 nt (start:25096, end:25075) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCAATAAGATGTGTCTGCTCT - TCCCAGATATAGACACCACTT) on contig 2 (5014909 nt) Astart:1269921 Aend:1269942 Bstart:1284583 Bend:1284562 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728588, end:728609) A=1096 nt (start:673, end:652) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282277, end:282298) B=2196 nt (start:458, end:437) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTGACAACAACCGTTTCTTGA - TACCATGTGAACTATTACCAC) on contig 2 (5014909 nt) Astart:1269106 Aend:1269127 Bstart:1283768 Bend:1283747 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#6 -> -3712398 <- tig#1, A=6870868 nt (start:5007482, end:5007503) B=4853111 nt (start:1869012, end:1868991) CALCULATED DISTANCE APART: -3712398 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730132, end:730153) B=3531543 nt (start:3199706, end:3199685) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#127 -> -57440 <- tig#17, B=80830 nt (start:63215, end:63236) A=1959065 nt (start:59825, end:59804) CALCULATED DISTANCE APART: -57440 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCTTGATTTTCAGTTATGTAA - CTAACTTCCTTAACCAAACTC) on contig 1 (4853111 nt) Astart:345711 Aend:345732 Bstart:390977 Bend:390956 CALCULATED DISTANCE APART: 45266 Pairs unsatisfied in distance within a contig. Pair (GCTAGGAATTGGACTAATAAT - AGAACTTTTTTTGTTTTGTTT) on contig 34 (1705564 nt) Astart:679669 Aend:679648 Bstart:664706 Bend:664727 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig. Pair (TACACTGTTCTACTCAATGGT - GTTTGGTTCAACGGCATGTTG) on contig 1 (4853111 nt) Astart:346995 Aend:347016 Bstart:392272 Bend:392251 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in pairing logic within a contig. Pair (ATATTACCGCAATCACTATGT - CCCACAATGGAGATATAAGAG) on contig 19 (3531543 nt) Astart:3060091 Aend:3060070 Bstart:3048632 Bend:3048611 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#148 -> -1869235 <- tig#15, A=35830 nt (start:33989, end:34010) B=3712591 nt (start:1887394, end:1887373) CALCULATED DISTANCE APART: -1869235 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGATGCTCAAAAGACTCAACC - TCTATATACCTACGTTTTATG) on contig 5 (3689108 nt) Astart:1178452 Aend:1178431 Bstart:1163318 Bend:1163339 CALCULATED DISTANCE APART: 15134 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33499, end:33478) A=855454 nt (start:18950, end:18929) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#36 -> -890564 <- tig#31, B=855454 nt (start:85224, end:85245) A=976128 nt (start:140334, end:140313) CALCULATED DISTANCE APART: -890564 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185864, end:4185843) A=3712591 nt (start:697, end:676) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTCCTCTGTACAACTGCTTGA - TTCCCTTTCTCTTTGGTGATT) on contig 1 (4853111 nt) Astart:346325 Aend:346346 Bstart:391602 Bend:391581 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig. Pair (CATTTCTATTAGGAGACACAG - AATCTGAAAAGACTAGTAATA) on contig 15 (3712591 nt) Astart:3350040 Aend:3350061 Bstart:3375028 Bend:3375007 CALCULATED DISTANCE APART: 24988 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#9 -> -3401512 <- tig#r.107, A=3747885 nt (start:358023, end:358044) B=68734 nt (start:37084, end:37105) CALCULATED DISTANCE APART: -3401512 < -2000 Pairs unsatisfied in distance within a contig. Pair (GCCATACATATTGGCGTCTCA - TGAAACATGATGTTGAAAGAA) on contig 30 (1050452 nt) Astart:649929 Aend:649950 Bstart:665695 Bend:665674 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#103 -> -259870 <- tig#r.48, A=211876 nt (start:14089, end:14110) B=487359 nt (start:405276, end:405297) CALCULATED DISTANCE APART: -259870 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:1805, end:1826) A=258385 nt (start:341, end:320) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TATGTTTTCGAAAAAACATAC - AAGTGATATATCTTAAGATTA) on contig 19 (3531543 nt) Astart:3058493 Aend:3058472 Bstart:3050227 Bend:3050206 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#22 -> -6369409 <- tig#6, B=1636463 nt (start:14213, end:14234) A=6870868 nt (start:4767159, end:4767138) CALCULATED DISTANCE APART: -6369409 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.58 -> -1866109 <- tig#19, B=374416 nt (start:14026, end:14005) A=3531543 nt (start:1872083, end:1872062) CALCULATED DISTANCE APART: -1866109 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259227, end:2259248) B=356404 nt (start:343997, end:344018) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAGAGAGCCGGTGTGGCATAC - CAGAGAAATCTAAGCATTTCC) on contig 15 (3712591 nt) Astart:3350120 Aend:3350141 Bstart:3375108 Bend:3375087 CALCULATED DISTANCE APART: 24988 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730842, end:730863) B=3531543 nt (start:3200416, end:3200395) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#305 -> -2202335 <- tig#r.19, A=1638 nt (start:292, end:313) B=3531543 nt (start:1310554, end:1310575) CALCULATED DISTANCE APART: -2202335 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ACCGCAATCACTATGTCCATA - TCTAACCCACAATGGAGATAT) on contig 19 (3531543 nt) Astart:3060086 Aend:3060065 Bstart:3048637 Bend:3048616 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16830, end:16809) A=1227811 nt (start:6985, end:6964) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728608, end:728629) A=1096 nt (start:693, end:672) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTCCTGTTAATAGATAGATAG - AAATCGATTGATTTGACGAAA) on contig 19 (3531543 nt) Astart:3058618 Aend:3058597 Bstart:3050102 Bend:3050081 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135233, end:135254) B=15068 nt (start:2443, end:2464) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:134908, end:134929) B=15068 nt (start:2768, end:2789) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.91 -> -51057 <- tig#31, B=101959 nt (start:15505, end:15484) A=976128 nt (start:55552, end:55531) CALCULATED DISTANCE APART: -51057 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#11 -> -6440833 <- tig#r.9, A=4628067 nt (start:549464, end:549485) B=3747885 nt (start:1365655, end:1365676) CALCULATED DISTANCE APART: -6440833 < -2000 Pairs unsatisfied in distance within a contig. Pair (ACAGAAACAGCTTGTTGAATT - AAAGGGTCCCAATGAATAATG) on contig 2 (5014909 nt) Astart:1269146 Aend:1269167 Bstart:1283808 Bend:1283787 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig. Pair (GAGACGTCAATCTTGTACTCG - TAAAGTAGTCTACACAGTTTA) on contig 15 (3712591 nt) Astart:3352437 Aend:3352458 Bstart:3377423 Bend:3377402 CALCULATED DISTANCE APART: 24986 Pairs unsatisfied in distance within a contig. Pair (TTACAAATTGTTTCTTTGTTA - TTTCTCCTATATGGAGAGAAC) on contig 5 (3689108 nt) Astart:1169557 Aend:1169578 Bstart:1184692 Bend:1184671 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219171, end:4219150) A=2598 nt (start:2450, end:2429) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#433 -> -944078 <- tig#r.29, A=1238 nt (start:83, end:104) B=1463708 nt (start:500785, end:500806) CALCULATED DISTANCE APART: -944078 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2185, end:2206) A=258385 nt (start:721, end:700) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CGGTGGATGATAGATCTTATC - TTGAAACGTTTCTTAATTAGT) on contig 15 (3712591 nt) Astart:1792131 Aend:1792110 Bstart:2056192 Bend:2056213 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259637, end:2259658) B=356404 nt (start:343587, end:343608) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#120 -> -1341554 <- tig#29, B=44710 nt (start:44097, end:44118) A=1463708 nt (start:1360941, end:1360920) CALCULATED DISTANCE APART: -1341554 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#51 -> -179537 <- tig#r.93, A=875428 nt (start:751090, end:751111) B=152036 nt (start:76837, end:76858) CALCULATED DISTANCE APART: -179537 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260182, end:2260203) B=356404 nt (start:343042, end:343063) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig. Pair (ACTCAAGGGAAATTCACTTGC - GATGCTCCTCAATGCAAGGTA) on contig 14 (2271162 nt) Astart:1978619 Aend:1978640 Bstart:2002789 Bend:2002768 CALCULATED DISTANCE APART: 24170 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#46 -> -3136023 <- tig#r.7, A=577887 nt (start:341131, end:341152) B=3534247 nt (start:614980, end:615001) CALCULATED DISTANCE APART: -3136023 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -3661475 <- tig#r.3, A=262460 nt (start:68604, end:68625) B=3889482 nt (start:401863, end:401884) CALCULATED DISTANCE APART: -3661475 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185639, end:4185618) A=3712591 nt (start:922, end:901) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.47 -> -199642 <- tig#2, B=471458 nt (start:121981, end:121960) A=5014909 nt (start:97661, end:97640) CALCULATED DISTANCE APART: -199642 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTTATTCCAATCTAAATATAT - ATTCAGTGAAGCAAATCAGGT) on contig 4 (3837743 nt) Astart:2358001 Aend:2358022 Bstart:2360061 Bend:2360082 Pairs unsatisfied in pairing logic within a contig. Pair (TTGAGAATGTTAAAAAAAAAA - AGCTGCTAGTCCTCCAGTTAC) on contig 9 (3747885 nt) Astart:2849090 Aend:2849111 Bstart:2856752 Bend:2856773 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#217 -> -1125292 <- tig#25, A=5246 nt (start:3791, end:3812) B=1290536 nt (start:1143837, end:1143816) CALCULATED DISTANCE APART: -1125292 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#1 -> -4220727 <- tig#r.10, A=4853111 nt (start:1841104, end:1841125) B=3047199 nt (start:1818479, end:1818500) CALCULATED DISTANCE APART: -4220727 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.459 -> -147882 <- tig#53, B=1183 nt (start:126, end:105) A=354284 nt (start:167756, end:167735) CALCULATED DISTANCE APART: -147882 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135168, end:135189) B=15068 nt (start:2508, end:2529) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3583 <- tig#26, B=1171658 nt (start:1171443, end:1171464) A=1332708 nt (start:23368, end:23347) CALCULATED DISTANCE APART: -3583 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3583 <- tig#26, B=1171658 nt (start:1171348, end:1171369) A=1332708 nt (start:23273, end:23252) CALCULATED DISTANCE APART: -3583 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#103 -> -259849 <- tig#r.48, A=211876 nt (start:14494, end:14515) B=487359 nt (start:404892, end:404913) CALCULATED DISTANCE APART: -259849 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -322558 <- tig#r.572, A=2650694 nt (start:2308710, end:2308731) B=1031 nt (start:457, end:478) CALCULATED DISTANCE APART: -322558 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GTTTGAGTGACAAGTCGTGCG - AGTGATCTCATTCTCCTCGTA) on contig 19 (3531543 nt) Astart:3060221 Aend:3060200 Bstart:3048502 Bend:3048481 Pairs unsatisfied in distance within a contig. Pair (CTTGGGGCGAGTATATGTACA - TTTTCCCAAGTCCAGAAGAGA) on contig 41 (667251 nt) Astart:88718 Aend:88697 Bstart:76038 Bend:76059 CALCULATED DISTANCE APART: 12680 Pairs unsatisfied in distance within a contig. Pair (GCCTTCTGATGAACTGTTGAT - ATTGCCAACATATGTCCATCA) on contig 37 (853709 nt) Astart:839154 Aend:839133 Bstart:823649 Bend:823670 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#453 -> -16426 <- tig#68, A=1197 nt (start:1009, end:1030) B=189499 nt (start:36238, end:36217) CALCULATED DISTANCE APART: -16426 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#53 -> -35994 <- tig#r.133, A=354284 nt (start:325767, end:325788) B=34073 nt (start:6596, end:6617) CALCULATED DISTANCE APART: -35994 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.257 -> -2902765 <- tig#8, B=1995 nt (start:1666, end:1645) A=5070776 nt (start:2921099, end:2921078) CALCULATED DISTANCE APART: -2902765 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082837, end:2082858) B=976128 nt (start:960685, end:960706) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082732, end:2082753) B=976128 nt (start:960790, end:960811) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#283 -> -3818458 <- tig#2, A=1768 nt (start:263, end:284) B=5014909 nt (start:3836953, end:3836932) CALCULATED DISTANCE APART: -3818458 < -2000 Pairs unsatisfied in distance within a contig. Pair (AATTTGACCAAACGCGTTGAT - TCTCCATTTTTTTAGAAAAAA) on contig 34 (1705564 nt) Astart:679949 Aend:679928 Bstart:664986 Bend:665007 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in pairing logic within a contig. Pair (TATGATGTGTTGGGTAAACAA - TTTATTGGGTCAAAATTAAGA) on contig 19 (3531543 nt) Astart:3058143 Aend:3058122 Bstart:3050577 Bend:3050556 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#74 -> -258393 <- tig#56, A=238371 nt (start:58938, end:58959) B=262460 nt (start:98960, end:98939) CALCULATED DISTANCE APART: -258393 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#6 -> -25592 <- tig#56, A=6870868 nt (start:6843003, end:6843024) B=262460 nt (start:17727, end:17706) CALCULATED DISTANCE APART: -25592 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3583 <- tig#26, B=1171658 nt (start:1171353, end:1171374) A=1332708 nt (start:23278, end:23257) CALCULATED DISTANCE APART: -3583 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -6170543 <- tig#6, B=5014909 nt (start:649167, end:649146) A=6870868 nt (start:5541376, end:5541355) CALCULATED DISTANCE APART: -6170543 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GTCAAGAAGTCGAGAAGTCAA - CCGTATTTTCCTCTTCAATAA) on contig 19 (3531543 nt) Astart:3059441 Aend:3059420 Bstart:3049282 Bend:3049261 Pairs unsatisfied in pairing logic within a contig. Pair (TGGATCATAAGAACTTGAAGT - CTGTTGTTCAATGATTTGCGC) on contig 19 (3531543 nt) Astart:3059746 Aend:3059725 Bstart:3048977 Bend:3048956 Pairs unsatisfied in pairing logic within a contig. Pair (CTACAATTTTTTATTTTTTGG - ATGTGTGGTCTCTTGTTTTAA) on contig 15 (3712591 nt) Astart:1717423 Aend:1717444 Bstart:1730595 Bend:1730616 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#7 -> -3580537 <- tig#r.32, A=3534247 nt (start:380432, end:380453) B=972151 nt (start:525429, end:525450) CALCULATED DISTANCE APART: -3580537 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6228 <- tig#57, B=27696 nt (start:1489, end:1510) A=258385 nt (start:21, end:0) CALCULATED DISTANCE APART: -6228 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282662, end:282683) B=2196 nt (start:843, end:822) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TCGTCAACGACTTCGTTTAGA - TAATATCTTGACGTATACAAT) on contig 15 (3712591 nt) Astart:1717078 Aend:1717099 Bstart:1730940 Bend:1730961 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#7 -> -3853079 <- tig#36, A=3534247 nt (start:146104, end:146125) B=855454 nt (start:484936, end:484915) CALCULATED DISTANCE APART: -3853079 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTAGAGAGAAACAATAATCTC - ACCCAAACTTGCATTGTCAGT) on contig 19 (3531543 nt) Astart:3060006 Aend:3059985 Bstart:3048717 Bend:3048696 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17130, end:17109) A=1227811 nt (start:6685, end:6664) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#148 -> -836235 <- tig#r.36, A=35830 nt (start:33879, end:33900) B=855454 nt (start:1170, end:1191) CALCULATED DISTANCE APART: -836235 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.58 -> -1866109 <- tig#19, B=374416 nt (start:14021, end:14000) A=3531543 nt (start:1872088, end:1872067) CALCULATED DISTANCE APART: -1866109 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259372, end:2259393) B=356404 nt (start:343852, end:343873) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGGGCGATGAAAATCTATCGG - CCGCCGTCCTGGTCGACGAAT) on contig 95 (92653 nt) Astart:92488 Aend:92467 Bstart:92182 Bend:92203 CALCULATED DISTANCE APART: 306 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#11 -> -4878196 <- tig#29, A=4628067 nt (start:684345, end:684366) B=1463708 nt (start:954474, end:954453) CALCULATED DISTANCE APART: -4878196 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.403 -> -2330792 <- tig#13, B=1321 nt (start:270, end:249) A=2650694 nt (start:2350522, end:2350501) CALCULATED DISTANCE APART: -2330792 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#11 -> -5298498 <- tig#r.19, A=4628067 nt (start:147068, end:147089) B=3531543 nt (start:2694044, end:2694065) CALCULATED DISTANCE APART: -5298498 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#56 -> -1319014 <- tig#29, B=262460 nt (start:154730, end:154751) A=1463708 nt (start:1231284, end:1231263) CALCULATED DISTANCE APART: -1319014 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460719, end:460698) A=1345436 nt (start:24941, end:24920) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:458759, end:458738) A=1345436 nt (start:26901, end:26880) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ACAAATTAATATTAGTTTTCA - AAAAAATTCCGCTACGCATAA) on contig 19 (3531543 nt) Astart:3060486 Aend:3060465 Bstart:3048237 Bend:3048216 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:458664, end:458643) A=1345436 nt (start:26996, end:26975) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATACAATATGAAGATAAAAAC - CCAGAAGGTTTGTTACTGCAA) on contig 4 (3837743 nt) Astart:2358071 Aend:2358092 Bstart:2359991 Bend:2360012 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#79 -> -356040 <- tig#37, A=136600 nt (start:75722, end:75743) B=853709 nt (start:315162, end:315141) CALCULATED DISTANCE APART: -356040 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#38 -> -891893 <- tig#35, B=1143067 nt (start:995020, end:995041) A=1135475 nt (start:763846, end:763825) CALCULATED DISTANCE APART: -891893 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219246, end:4219225) A=2598 nt (start:2375, end:2354) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185974, end:4185953) A=3712591 nt (start:587, end:566) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.257 -> -2902765 <- tig#8, B=1995 nt (start:1551, end:1530) A=5070776 nt (start:2921214, end:2921193) CALCULATED DISTANCE APART: -2902765 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#611 -> -162268 <- tig#r.75, A=939 nt (start:581, end:602) B=373953 nt (start:192043, end:192064) CALCULATED DISTANCE APART: -162268 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.34 -> -1686692 <- tig#46, B=1705564 nt (start:1679308, end:1679287) A=577887 nt (start:27384, end:27363) CALCULATED DISTANCE APART: -1686692 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728343, end:728364) A=1096 nt (start:428, end:407) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#47 -> -583213 <- tig#r.69, A=471458 nt (start:9948, end:9969) B=186132 nt (start:44429, end:44450) CALCULATED DISTANCE APART: -583213 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219071, end:4219050) A=2598 nt (start:2550, end:2529) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig. Pair (AATATGTGGAGAAGATAGATG - AAGAACGCATAGGGTACAGAT) on contig 2 (5014909 nt) Astart:1269306 Aend:1269327 Bstart:1283968 Bend:1283947 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#57 -> -3231864 <- tig#7, A=258385 nt (start:256059, end:256080) B=3534247 nt (start:3249538, end:3249517) CALCULATED DISTANCE APART: -3231864 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TGTTTCACTCTTTGTTTTATT - CAAACACTAAAGCTATATGAT) on contig 19 (3531543 nt) Astart:3058538 Aend:3058517 Bstart:3050182 Bend:3050161 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#47 -> -583213 <- tig#r.69, A=471458 nt (start:9958, end:9979) B=186132 nt (start:44419, end:44440) CALCULATED DISTANCE APART: -583213 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185719, end:4185698) A=3712591 nt (start:842, end:821) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728458, end:728479) A=1096 nt (start:543, end:522) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135073, end:135094) B=15068 nt (start:2603, end:2624) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728668, end:728689) A=1096 nt (start:753, end:732) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATCATGTAGTCAGTAATATAA - TAACACCGAGCTCTGCTACGT) on contig 41 (667251 nt) Astart:88493 Aend:88472 Bstart:75813 Bend:75834 CALCULATED DISTANCE APART: 12680 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.84 -> -178422 <- tig#279, B=197079 nt (start:196823, end:196802) A=1777 nt (start:1599, end:1578) CALCULATED DISTANCE APART: -178422 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -1335763 <- tig#4, B=3747885 nt (start:2857682, end:2857703) A=3837743 nt (start:465560, end:465539) CALCULATED DISTANCE APART: -1335763 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#49 -> -158252 <- tig#78, B=399963 nt (start:351947, end:351968) A=184063 nt (start:130236, end:130215) CALCULATED DISTANCE APART: -158252 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#342 -> -576944 <- tig#43, B=1467 nt (start:1440, end:1461) A=1235946 nt (start:596917, end:596896) CALCULATED DISTANCE APART: -576944 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#25 -> -1269344 <- tig#r.12, A=1290536 nt (start:70841, end:70862) B=2766197 nt (start:2696548, end:2696569) CALCULATED DISTANCE APART: -1269344 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10683, end:10662) A=2766197 nt (start:2150880, end:2150859) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#77 -> -122338 <- tig#99, B=160344 nt (start:25094, end:25115) A=88102 nt (start:7088, end:7067) CALCULATED DISTANCE APART: -122338 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGATCGATTAGACAAAGGCAA - TGGAGTAAGCGTCGAAATTGT) on contig 131 (36503 nt) Astart:21147 Aend:21168 Bstart:13712 Bend:13733 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16140, end:16119) A=1227811 nt (start:7675, end:7654) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATTCTTTGTGGAACTTTTTTT - TAAAACCACTCTGGCTAGACA) on contig 37 (853709 nt) Astart:538967 Aend:538988 Bstart:551637 Bend:551616 CALCULATED DISTANCE APART: 12670 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#25 -> -666259 <- tig#2, B=1290536 nt (start:852802, end:852823) A=5014909 nt (start:248525, end:248504) CALCULATED DISTANCE APART: -666259 < -2000 Pairs unsatisfied in distance within a contig. Pair (GTGGAAAAGTGAGGTTGAGAG - CTCAGGTGTATTCCTCAGGAA) on contig 37 (853709 nt) Astart:838899 Aend:838878 Bstart:823394 Bend:823415 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#39 -> -2984839 <- tig#12, B=736718 nt (start:457358, end:457379) A=2766197 nt (start:2725479, end:2725458) CALCULATED DISTANCE APART: -2984839 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460559, end:460538) A=1345436 nt (start:25101, end:25080) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATTATAAGTTCAGTATCAATT - ATCACAAATATGGGTGCTTAT) on contig 25 (1290536 nt) Astart:1184002 Aend:1184023 Bstart:1199289 Bend:1199268 CALCULATED DISTANCE APART: 15287 Pairs unsatisfied in distance within a contig. Pair (GGATGTTTTGATGGAGAAGGA - TGCCTCATATTCAGCTGAAAC) on contig 27 (1227811 nt) Astart:434690 Aend:434711 Bstart:450943 Bend:450922 CALCULATED DISTANCE APART: 16253 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#148 -> -836231 <- tig#r.36, A=35830 nt (start:33844, end:33865) B=855454 nt (start:1209, end:1230) CALCULATED DISTANCE APART: -836231 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#46 -> -3144173 <- tig#12, B=577887 nt (start:139398, end:139419) A=2766197 nt (start:2725684, end:2725663) CALCULATED DISTANCE APART: -3144173 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16505, end:16484) A=1227811 nt (start:7310, end:7289) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#103 -> -188044 <- tig#521, A=211876 nt (start:4819, end:4840) B=1100 nt (start:987, end:966) CALCULATED DISTANCE APART: -188044 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#135 -> -8812 <- tig#r.114, A=39094 nt (start:37681, end:37702) B=54818 nt (start:27419, end:27440) CALCULATED DISTANCE APART: -8812 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:458914, end:458893) A=1345436 nt (start:26746, end:26725) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219191, end:4219170) A=2598 nt (start:2430, end:2409) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTCAACCGTTCAAGGCTAAGA - TTGCCGAACCTTGAGTGTAGA) on contig 27 (1227811 nt) Astart:434615 Aend:434636 Bstart:450868 Bend:450847 CALCULATED DISTANCE APART: 16253 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#19 -> -1649636 <- tig#31, A=3531543 nt (start:1878167, end:1878188) B=976128 nt (start:16260, end:16239) CALCULATED DISTANCE APART: -1649636 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.1 -> -4590180 <- tig#16, B=4853111 nt (start:3208417, end:3208396) A=2098954 nt (start:1401763, end:1401742) CALCULATED DISTANCE APART: -4590180 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTCGTATGATTCATTCTTCTA - CTTTAACAGCTTGAAACAACA) on contig 1 (4853111 nt) Astart:346270 Aend:346291 Bstart:391547 Bend:391526 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3582 <- tig#26, B=1171658 nt (start:1170974, end:1170995) A=1332708 nt (start:22898, end:22877) CALCULATED DISTANCE APART: -3582 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#433 -> -944078 <- tig#r.29, A=1238 nt (start:561, end:582) B=1463708 nt (start:500307, end:500328) CALCULATED DISTANCE APART: -944078 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.28 -> -4041595 <- tig#8, B=1171658 nt (start:690006, end:689985) A=5070776 nt (start:3371589, end:3371568) CALCULATED DISTANCE APART: -4041595 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.38 -> -1310007 <- tig#33, B=1143067 nt (start:1039169, end:1039148) A=1290487 nt (start:290838, end:290817) CALCULATED DISTANCE APART: -1310007 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#47 -> -314050 <- tig#6, A=471458 nt (start:149701, end:149722) B=6870868 nt (start:12293, end:12272) CALCULATED DISTANCE APART: -314050 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#40 -> -506904 <- tig#r.79, A=668174 nt (start:201387, end:201408) B=136600 nt (start:76483, end:76504) CALCULATED DISTANCE APART: -506904 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#46 -> -3144174 <- tig#12, B=577887 nt (start:138277, end:138298) A=2766197 nt (start:2724564, end:2724543) CALCULATED DISTANCE APART: -3144174 < -2000 Pairs unsatisfied in distance within a contig. Pair (TATCAAAATAGTATACTACTT - TTAACTAGACAAGTGTTCCAT) on contig 13 (2650694 nt) Astart:2350847 Aend:2350826 Bstart:2327499 Bend:2327520 CALCULATED DISTANCE APART: 23348 Pairs unsatisfied in pairing logic within a contig. Pair (AAGTAAACTGTTGACTAATAA - TGTCAGCTCGGATATTCAAAT) on contig 19 (3531543 nt) Astart:3059336 Aend:3059315 Bstart:3049387 Bend:3049366 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#19 -> -2183093 <- tig#r.32, A=3531543 nt (start:1774802, end:1774823) B=972151 nt (start:525799, end:525820) CALCULATED DISTANCE APART: -2183093 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#11 -> -10952403 <- tig#6, A=4628067 nt (start:266537, end:266558) B=6870868 nt (start:6610873, end:6610852) CALCULATED DISTANCE APART: -10952403 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16455, end:16434) A=1227811 nt (start:7360, end:7339) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CAGCAGAAGAAGAAGGAGAAT - TTTATTGGTCATTTGGATCTT) on contig 7 (3534247 nt) Astart:2256662 Aend:2256641 Bstart:2238116 Bend:2238095 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082487, end:2082508) B=976128 nt (start:961035, end:961056) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTTACTAATCAAGTATTTGTT - ATCAGACTCGTAACCACGTCG) on contig 19 (3531543 nt) Astart:3058573 Aend:3058552 Bstart:3050147 Bend:3050126 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.403 -> -2330792 <- tig#13, B=1321 nt (start:560, end:539) A=2650694 nt (start:2350232, end:2350211) CALCULATED DISTANCE APART: -2330792 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -6170543 <- tig#6, B=5014909 nt (start:649182, end:649161) A=6870868 nt (start:5541361, end:5541340) CALCULATED DISTANCE APART: -6170543 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#34 -> -332078 <- tig#53, B=1705564 nt (start:1679285, end:1679306) A=354284 nt (start:325799, end:325778) CALCULATED DISTANCE APART: -332078 < -2000 Pairs unsatisfied in distance within a contig. Pair (TAACAAGGATACACTACTTAG - AAGCCTAAGTAGTGTATCCTT) on contig 53 (354284 nt) Astart:325799 Aend:325778 Bstart:325774 Bend:325795 CALCULATED DISTANCE APART: 25 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#23 -> -1355672 <- tig#129, B=1345436 nt (start:9147, end:9168) A=39603 nt (start:39383, end:39362) CALCULATED DISTANCE APART: -1355672 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#11 -> -5298498 <- tig#r.19, A=4628067 nt (start:147073, end:147094) B=3531543 nt (start:2694039, end:2694060) CALCULATED DISTANCE APART: -5298498 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#22 -> -6369411 <- tig#6, B=1636463 nt (start:14276, end:14297) A=6870868 nt (start:4767224, end:4767203) CALCULATED DISTANCE APART: -6369411 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGGTCGAGCAATTTCACTGAA - GCTGCTGCTTGTATTCATGAA) on contig 2 (5014909 nt) Astart:1269051 Aend:1269072 Bstart:1283713 Bend:1283692 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259507, end:2259528) B=356404 nt (start:343717, end:343738) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -40662 <- tig#443, A=736718 nt (start:676821, end:676842) B=1213 nt (start:765, end:744) CALCULATED DISTANCE APART: -40662 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#74 -> -258350 <- tig#56, B=238371 nt (start:58981, end:59002) A=262460 nt (start:98960, end:98939) CALCULATED DISTANCE APART: -258350 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#7 -> -189847 <- tig#65, B=3534247 nt (start:3524802, end:3524823) A=286124 nt (start:200402, end:200381) CALCULATED DISTANCE APART: -189847 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260922, end:2260943) B=356404 nt (start:342302, end:342323) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#81 -> -3967 <- tig#189, A=258617 nt (start:240909, end:240930) B=7795 nt (start:6259, end:6238) CALCULATED DISTANCE APART: -3967 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082502, end:2082523) B=976128 nt (start:961020, end:961041) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185654, end:4185633) A=3712591 nt (start:907, end:886) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#33 -> -492044 <- tig#32, A=1290487 nt (start:1235762, end:1235783) B=972151 nt (start:457319, end:457298) CALCULATED DISTANCE APART: -492044 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TCACTCACCAGACGTAGGTAA - AATGCTCAATTTCAAGTTTTA) on contig 15 (3712591 nt) Astart:1716933 Aend:1716954 Bstart:1731085 Bend:1731106 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282202, end:282223) B=2196 nt (start:383, end:362) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#38 -> -1110027 <- tig#78, B=1143067 nt (start:142956, end:142977) A=184063 nt (start:129916, end:129895) CALCULATED DISTANCE APART: -1110027 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.15 -> -3863647 <- tig#1, B=3712591 nt (start:1966287, end:1966266) A=4853111 nt (start:1917360, end:1917339) CALCULATED DISTANCE APART: -3863647 < -2000 Pairs unsatisfied in distance within a contig. Pair (GCAGAGAGACAAGGATTTGCT - CTGAAGTTTTAAAGTGAAAAA) on contig 1 (4853111 nt) Astart:346650 Aend:346671 Bstart:391927 Bend:391906 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -1335758 <- tig#4, B=3747885 nt (start:2856817, end:2856838) A=3837743 nt (start:464690, end:464669) CALCULATED DISTANCE APART: -1335758 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATTTGTATGAGGATGTTTTGA - TCAGCTGAAACAAGTCATTAT) on contig 27 (1227811 nt) Astart:434680 Aend:434701 Bstart:450933 Bend:450912 CALCULATED DISTANCE APART: 16253 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460114, end:460093) A=1345436 nt (start:25546, end:25525) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTATACTCGGTGGAAGCTCCC - TATTACCTAACTTTCTTAAAA) on contig 30 (1050452 nt) Astart:650589 Aend:650610 Bstart:666355 Bend:666334 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282512, end:282533) B=2196 nt (start:693, end:672) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GTCAAGAGTCCATGATCCTTC - AAAAAAGAGAGTTGATGTGGT) on contig 15 (3712591 nt) Astart:1716783 Aend:1716804 Bstart:1731235 Bend:1731256 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.31 -> -71287 <- tig#98, B=976128 nt (start:16365, end:16344) A=88184 nt (start:74922, end:74901) CALCULATED DISTANCE APART: -71287 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#46 -> -3144173 <- tig#12, B=577887 nt (start:139423, end:139444) A=2766197 nt (start:2725709, end:2725688) CALCULATED DISTANCE APART: -3144173 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#58 -> -2789488 <- tig#12, A=374416 nt (start:239881, end:239902) B=2766197 nt (start:2674953, end:2674932) CALCULATED DISTANCE APART: -2789488 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.29 -> -1609386 <- tig#35, B=1463708 nt (start:953939, end:953918) A=1135475 nt (start:675447, end:675426) CALCULATED DISTANCE APART: -1609386 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -621133 <- tig#r.66, A=2766197 nt (start:2129813, end:2129834) B=201913 nt (start:197164, end:197185) CALCULATED DISTANCE APART: -621133 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ACTCTTTCATTTTTCTAGTGT - CCCAGTCATCTTCTTCATCAC) on contig 14 (2271162 nt) Astart:1848911 Aend:1848890 Bstart:2003839 Bend:2003818 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459799, end:459778) A=1345436 nt (start:25861, end:25840) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#36 -> -890564 <- tig#31, B=855454 nt (start:85219, end:85240) A=976128 nt (start:140329, end:140308) CALCULATED DISTANCE APART: -890564 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GAACTTGAAGTAAACTAAGAT - TCGTTTTCCGCTGTTGTTCAA) on contig 19 (3531543 nt) Astart:3059736 Aend:3059715 Bstart:3048987 Bend:3048966 Pairs unsatisfied in distance within a contig. Pair (ATCTTAAAGGCGTAAGAATTG - TTCTAACAAGGATACAATTCT) on contig 34 (1705564 nt) Astart:1679274 Aend:1679295 Bstart:1679309 Bend:1679288 CALCULATED DISTANCE APART: 35 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#34 -> -25019 <- tig#r.143, A=1705564 nt (start:1679274, end:1679295) B=24293 nt (start:5564, end:5585) CALCULATED DISTANCE APART: -25019 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATCTTAAAGGCGTAAGAATTG - ACAAGGATACAATTCTTACGC) on contig 34 (1705564 nt) Astart:1679274 Aend:1679295 Bstart:1679304 Bend:1679283 CALCULATED DISTANCE APART: 30 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#34 -> -6330 <- tig#r.132, A=1705564 nt (start:1679274, end:1679295) B=34686 nt (start:34646, end:34667) CALCULATED DISTANCE APART: -6330 < -2000 Pairs unsatisfied in distance within a contig. Pair (GAGGTATGTCTGAAATCAATA - CCACTTGAATGTTATCATTTT) on contig 2 (5014909 nt) Astart:1269906 Aend:1269927 Bstart:1284568 Bend:1284547 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#57 -> -3231864 <- tig#7, A=258385 nt (start:256009, end:256030) B=3534247 nt (start:3249488, end:3249467) CALCULATED DISTANCE APART: -3231864 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136593, end:136614) B=15068 nt (start:1083, end:1104) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#7 -> -3853079 <- tig#36, A=3534247 nt (start:145994, end:146015) B=855454 nt (start:484826, end:484805) CALCULATED DISTANCE APART: -3853079 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.28 -> -4041595 <- tig#8, B=1171658 nt (start:689901, end:689880) A=5070776 nt (start:3371694, end:3371673) CALCULATED DISTANCE APART: -4041595 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGGGATTACGTGAAAGTGACA - ACTTTTTATTTTTGGAGATGG) on contig 34 (1705564 nt) Astart:679814 Aend:679793 Bstart:664851 Bend:664872 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:281952, end:281973) B=2196 nt (start:133, end:112) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.403 -> -2330792 <- tig#13, B=1321 nt (start:1000, end:979) A=2650694 nt (start:2349792, end:2349771) CALCULATED DISTANCE APART: -2330792 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730212, end:730233) B=3531543 nt (start:3199786, end:3199765) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.41 -> -954030 <- tig#17, B=667251 nt (start:483476, end:483455) A=1959065 nt (start:490554, end:490533) CALCULATED DISTANCE APART: -954030 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#15 -> -8116131 <- tig#6, B=3712591 nt (start:343099, end:343120) A=6870868 nt (start:4766639, end:4766618) CALCULATED DISTANCE APART: -8116131 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#7 -> -62553 <- tig#74, B=3534247 nt (start:3523317, end:3523338) A=238371 nt (start:71623, end:71602) CALCULATED DISTANCE APART: -62553 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATATATGGATCATAAGAACTT - GTTCAATGATTTGCGCAAGTC) on contig 19 (3531543 nt) Astart:3059751 Aend:3059730 Bstart:3048972 Bend:3048951 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#63 -> -88117 <- tig#145, A=274372 nt (start:183346, end:183367) B=21756 nt (start:17091, end:17070) CALCULATED DISTANCE APART: -88117 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.34 -> -2993112 <- tig#12, B=1705564 nt (start:1160569, end:1160548) A=2766197 nt (start:1852543, end:1852522) CALCULATED DISTANCE APART: -2993112 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282747, end:282768) B=2196 nt (start:928, end:907) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#103 -> -259849 <- tig#r.48, A=211876 nt (start:14654, end:14675) B=487359 nt (start:404732, end:404753) CALCULATED DISTANCE APART: -259849 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219356, end:4219335) A=2598 nt (start:2265, end:2244) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#433 -> -944078 <- tig#r.29, A=1238 nt (start:576, end:597) B=1463708 nt (start:500292, end:500313) CALCULATED DISTANCE APART: -944078 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#77 -> -127682 <- tig#51, B=160344 nt (start:13496, end:13517) A=875428 nt (start:834, end:813) CALCULATED DISTANCE APART: -127682 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#7 -> -2854910 <- tig#r.68, A=3534247 nt (start:666602, end:666623) B=189499 nt (start:182234, end:182255) CALCULATED DISTANCE APART: -2854910 < -2000 Pairs unsatisfied in distance within a contig. Pair (GAGAAAGGGTTTTATGTGAGA - AATTAATAGAATAAAAATCTA) on contig 5 (3689108 nt) Astart:1178292 Aend:1178271 Bstart:1163158 Bend:1163179 CALCULATED DISTANCE APART: 15134 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3583 <- tig#26, B=1171658 nt (start:1171108, end:1171129) A=1332708 nt (start:23033, end:23012) CALCULATED DISTANCE APART: -3583 < -2000 Pairs unsatisfied in distance within a contig. Pair (CATAACATCTAGTCAGATTTG - GTCGACAAAAAGTCAATGGAA) on contig 74 (238371 nt) Astart:15384 Aend:15405 Bstart:26415 Bend:26394 CALCULATED DISTANCE APART: 11031 Pairs unsatisfied in pairing logic within a contig. Pair (GACATGCTTAGGAATCTCACC - GGAGCTTCAATGTGTATGGCT) on contig 9 (3747885 nt) Astart:2849124 Aend:2849145 Bstart:2856717 Bend:2856738 Pairs unsatisfied in pairing logic within a contig. Pair (TTATGATGTTGTTTCTTAGAG - GTCAGTGGACACTCAAAAAGA) on contig 19 (3531543 nt) Astart:3060021 Aend:3060000 Bstart:3048702 Bend:3048681 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#120 -> -1341554 <- tig#29, B=44710 nt (start:43727, end:43748) A=1463708 nt (start:1360571, end:1360550) CALCULATED DISTANCE APART: -1341554 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -3661475 <- tig#r.3, A=262460 nt (start:68589, end:68610) B=3889482 nt (start:401878, end:401899) CALCULATED DISTANCE APART: -3661475 < -2000 Pairs unsatisfied in distance within a contig. Pair (GGAGGTGGCGGCGGCATAATG - GGATCACTCTTCCACAAGAAG) on contig 5 (3689108 nt) Astart:1169727 Aend:1169748 Bstart:1184862 Bend:1184841 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#9 -> -2729016 <- tig#69, A=3747885 nt (start:1134458, end:1134479) B=186132 nt (start:135589, end:135568) CALCULATED DISTANCE APART: -2729016 < -2000 Pairs unsatisfied in distance within a contig. Pair (CCAAGCAAACCATTGTATGGC - GAGAGGTGTGAGTCGAGTGAG) on contig 27 (1227811 nt) Astart:434450 Aend:434471 Bstart:450703 Bend:450682 CALCULATED DISTANCE APART: 16253 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#81 -> -141016 <- tig#74, A=258617 nt (start:239830, end:239851) B=238371 nt (start:142229, end:142208) CALCULATED DISTANCE APART: -141016 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#265 -> -3126344 <- tig#4, A=1946 nt (start:1861, end:1882) B=3837743 nt (start:3146259, end:3146238) CALCULATED DISTANCE APART: -3126344 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#9 -> -3436465 <- tig#r.64, A=3747885 nt (start:435408, end:435429) B=211265 nt (start:67277, end:67298) CALCULATED DISTANCE APART: -3436465 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#48 -> -123655 <- tig#r.84, A=487359 nt (start:470695, end:470716) B=197079 nt (start:70088, end:70109) CALCULATED DISTANCE APART: -123655 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#39 -> -357382 <- tig#r.48, A=736718 nt (start:457871, end:457892) B=487359 nt (start:388824, end:388845) CALCULATED DISTANCE APART: -357382 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459539, end:459518) A=1345436 nt (start:26121, end:26100) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -4201 <- tig#r.96, A=262460 nt (start:244196, end:244217) B=91302 nt (start:85365, end:85386) CALCULATED DISTANCE APART: -4201 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -3645223 <- tig#14, B=5014909 nt (start:1663865, end:1663844) A=2271162 nt (start:2001358, end:2001337) CALCULATED DISTANCE APART: -3645223 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.139 -> -20703 <- tig#109, B=27696 nt (start:21672, end:21651) A=66564 nt (start:19031, end:19010) CALCULATED DISTANCE APART: -20703 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -214292 <- tig#6, A=354284 nt (start:133510, end:133531) B=6870868 nt (start:13518, end:13497) CALCULATED DISTANCE APART: -214292 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#433 -> -944078 <- tig#r.29, A=1238 nt (start:586, end:607) B=1463708 nt (start:500282, end:500303) CALCULATED DISTANCE APART: -944078 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730857, end:730878) B=3531543 nt (start:3200431, end:3200410) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -1631868 <- tig#18, A=736718 nt (start:271482, end:271503) B=1738864 nt (start:1186632, end:1186611) CALCULATED DISTANCE APART: -1631868 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTTGTTGAATTAACTTGTTTC - TCTTATCATTAAAGGGTCCCA) on contig 2 (5014909 nt) Astart:1269156 Aend:1269177 Bstart:1283818 Bend:1283797 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.17 -> -4235404 <- tig#3, B=1959065 nt (start:1446466, end:1446445) A=3889482 nt (start:2808938, end:2808917) CALCULATED DISTANCE APART: -4235404 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#100 -> -20341 <- tig#r.90, A=122157 nt (start:87042, end:87063) B=112304 nt (start:107078, end:107099) CALCULATED DISTANCE APART: -20341 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460639, end:460618) A=1345436 nt (start:25021, end:25000) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728288, end:728309) A=1096 nt (start:373, end:352) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12846, end:12825) A=91302 nt (start:11347, end:11326) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTGAGAGCACATGCCATCTTT - ATATAACGTAACGTAAGCAAC) on contig 15 (3712591 nt) Astart:2103246 Aend:2103225 Bstart:2056432 Bend:2056453 CALCULATED DISTANCE APART: 46814 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259792, end:2259813) B=356404 nt (start:343432, end:343453) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730217, end:730238) B=3531543 nt (start:3199791, end:3199770) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#16 -> -1845669 <- tig#270, B=2098954 nt (start:233436, end:233457) A=1880 nt (start:151, end:130) CALCULATED DISTANCE APART: -1845669 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GAAACAGCTGTCTCTGCTCTT - TTGAAATAGCCATGATTCTCC) on contig 15 (3712591 nt) Astart:1717983 Aend:1718004 Bstart:1730035 Bend:1730056 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:731012, end:731033) B=3531543 nt (start:3200586, end:3200565) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10633, end:10612) A=2766197 nt (start:2150930, end:2150909) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTGGTATCTTTGAGTTGATGA - GCAGCGCTTCTAAAGAAAACG) on contig 1 (4853111 nt) Astart:346840 Aend:346861 Bstart:392117 Bend:392096 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#23 -> -893555 <- tig#101, A=1345436 nt (start:455665, end:455686) B=84691 nt (start:23784, end:23763) CALCULATED DISTANCE APART: -893555 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#4 -> -1832202 <- tig#36, B=3837743 nt (start:2583740, end:2583761) A=855454 nt (start:598199, end:598178) CALCULATED DISTANCE APART: -1832202 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259937, end:2259958) B=356404 nt (start:343287, end:343308) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#4 -> -4036387 <- tig#8, B=3837743 nt (start:690678, end:690699) A=5070776 nt (start:909322, end:909301) CALCULATED DISTANCE APART: -4036387 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#5 -> -710554 <- tig#54, A=3689108 nt (start:3494770, end:3494791) B=625914 nt (start:536216, end:536195) CALCULATED DISTANCE APART: -710554 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#52 -> -356009 <- tig#3, B=356404 nt (start:27, end:48) A=3889482 nt (start:19632, end:19611) CALCULATED DISTANCE APART: -356009 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#91 -> -2722890 <- tig#12, B=101959 nt (start:82963, end:82984) A=2766197 nt (start:2723894, end:2723873) CALCULATED DISTANCE APART: -2722890 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#48 -> -1362255 <- tig#32, B=487359 nt (start:11541, end:11562) A=972151 nt (start:906437, end:906416) CALCULATED DISTANCE APART: -1362255 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#62 -> -6861560 <- tig#6, A=354710 nt (start:128190, end:128211) B=6870868 nt (start:6655040, end:6655019) CALCULATED DISTANCE APART: -6861560 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#25 -> -666259 <- tig#2, B=1290536 nt (start:852777, end:852798) A=5014909 nt (start:248500, end:248479) CALCULATED DISTANCE APART: -666259 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -214292 <- tig#6, A=354284 nt (start:134195, end:134216) B=6870868 nt (start:14203, end:14182) CALCULATED DISTANCE APART: -214292 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6228 <- tig#57, B=27696 nt (start:1539, end:1560) A=258385 nt (start:71, end:50) CALCULATED DISTANCE APART: -6228 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259857, end:2259878) B=356404 nt (start:343367, end:343388) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#590 -> -1631326 <- tig#r.34, A=1018 nt (start:367, end:388) B=1705564 nt (start:54889, end:54910) CALCULATED DISTANCE APART: -1631326 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:134833, end:134854) B=15068 nt (start:2843, end:2864) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CTGCGGAGAAGCAGGCCGGAC - TGGCCTAACTTTCACACCTGA) on contig 48 (487359 nt) Astart:38524 Aend:38545 Bstart:385477 Bend:385498 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282252, end:282273) B=2196 nt (start:433, end:412) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.28 -> -4041595 <- tig#8, B=1171658 nt (start:689976, end:689955) A=5070776 nt (start:3371619, end:3371598) CALCULATED DISTANCE APART: -4041595 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#42 -> -205591 <- tig#11, A=659641 nt (start:536135, end:536156) B=4628067 nt (start:102085, end:102064) CALCULATED DISTANCE APART: -205591 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.521 -> -380132 <- tig#39, B=1100 nt (start:272, end:251) A=736718 nt (start:399860, end:399839) CALCULATED DISTANCE APART: -380132 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136018, end:136039) B=15068 nt (start:1658, end:1679) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460479, end:460458) A=1345436 nt (start:25181, end:25160) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATTACTCAGAGTTATCAGGTT - TTTTATTTGGTATTCTAGACA) on contig 13 (2650694 nt) Astart:2351042 Aend:2351021 Bstart:2336103 Bend:2336124 CALCULATED DISTANCE APART: 14939 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.43 -> -1595889 <- tig#17, B=1235946 nt (start:1125190, end:1125169) A=1959065 nt (start:490699, end:490678) CALCULATED DISTANCE APART: -1595889 < -2000 Pairs unsatisfied in distance within a contig. Pair (TATATCTGCAAGGGTCCTCGA - TGTTTAACCACATTTGGGACC) on contig 30 (1050452 nt) Astart:648734 Aend:648755 Bstart:673768 Bend:673747 CALCULATED DISTANCE APART: 25034 Pairs unsatisfied in distance within a contig. Pair (ATCCTCCTGCTTCCAAAAAAA - ATTTGTTTTAACAATAATTGA) on contig 5 (3689108 nt) Astart:1178417 Aend:1178396 Bstart:1163283 Bend:1163304 CALCULATED DISTANCE APART: 15134 Pairs unsatisfied in distance within a contig. Pair (AAAACCTGTAAAACATCCAAA - ACTAGGGGGCAAAGCAAAATA) on contig 15 (3712591 nt) Astart:3349990 Aend:3350011 Bstart:3374978 Bend:3374957 CALCULATED DISTANCE APART: 24988 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12076, end:12055) A=91302 nt (start:12117, end:12096) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#53 -> -314812 <- tig#75, B=354284 nt (start:24614, end:24635) A=373953 nt (start:5142, end:5121) CALCULATED DISTANCE APART: -314812 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TGTCGGATTAATCATGACCCT - AAGACGTGTGGGACGGCCGAC) on contig 19 (3531543 nt) Astart:3058648 Aend:3058627 Bstart:3050072 Bend:3050051 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#33 -> -492044 <- tig#32, A=1290487 nt (start:1235737, end:1235758) B=972151 nt (start:457294, end:457273) CALCULATED DISTANCE APART: -492044 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTTAAGGTTTTGGAAAGCGTT - CTGCAGGAACCAAATATGGTG) on contig 37 (853709 nt) Astart:839199 Aend:839178 Bstart:823694 Bend:823715 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#7 -> -189847 <- tig#65, B=3534247 nt (start:3524837, end:3524858) A=286124 nt (start:200437, end:200416) CALCULATED DISTANCE APART: -189847 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#53 -> -314811 <- tig#75, B=354284 nt (start:24894, end:24915) A=373953 nt (start:5421, end:5400) CALCULATED DISTANCE APART: -314811 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#64 -> -210549 <- tig#109, B=211265 nt (start:787, end:808) A=66564 nt (start:20071, end:20050) CALCULATED DISTANCE APART: -210549 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#10 -> -2837213 <- tig#45, B=3047199 nt (start:393009, end:393030) A=528133 nt (start:203023, end:203002) CALCULATED DISTANCE APART: -2837213 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#34 -> -6337 <- tig#129, B=1705564 nt (start:1679280, end:1679301) A=39603 nt (start:53, end:32) CALCULATED DISTANCE APART: -6337 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTTAAGATCCGGTTGCGGTTT - GCTTTGAGAAGCAAGATGAAG) on contig 129 (39603 nt) Astart:53 Aend:32 Bstart:3086 Bend:3107 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136288, end:136309) B=15068 nt (start:1388, end:1409) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TGTTTTACAACATGAGCCTGA - CACGTGTTGTCCACCGTCAGA) on contig 7 (3534247 nt) Astart:2255757 Aend:2255736 Bstart:2239020 Bend:2238999 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#19 -> -9908551 <- tig#6, A=3531543 nt (start:469431, end:469452) B=6870868 nt (start:6866439, end:6866418) CALCULATED DISTANCE APART: -9908551 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATCGGATGCACAAAATGACTC - GCTGCATGTGTCATATACAAA) on contig 6 (6870868 nt) Astart:1138064 Aend:1138043 Bstart:1129637 Bend:1129658 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in pairing logic within a contig. Pair (AAGTTTTAATGGACTCGTCAA - GGAAGAAGACTTTGGTCTCGA) on contig 3 (3889482 nt) Astart:2808568 Aend:2808547 Bstart:2767890 Bend:2767869 Pairs unsatisfied in distance within a contig. Pair (AATCATACCTTAAAAGATTTT - AAATGCAGCAACTTAGAAATC) on contig 109 (66564 nt) Astart:6609 Aend:6588 Bstart:984 Bend:1005 CALCULATED DISTANCE APART: 5625 Pairs unsatisfied in pairing logic within a contig. Pair (CTTTTGGCTTTTTCTTCAAGC - ACAATTTCATATTTTCATACA) on contig 19 (3531543 nt) Astart:3058738 Aend:3058717 Bstart:3049982 Bend:3049961 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#120 -> -1341554 <- tig#29, B=44710 nt (start:43592, end:43613) A=1463708 nt (start:1360436, end:1360415) CALCULATED DISTANCE APART: -1341554 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12806, end:12785) A=91302 nt (start:11387, end:11366) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12491, end:12470) A=91302 nt (start:11702, end:11681) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33454, end:33433) A=855454 nt (start:18995, end:18974) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#10 -> -4643997 <- tig#13, B=3047199 nt (start:390574, end:390595) A=2650694 nt (start:2007372, end:2007351) CALCULATED DISTANCE APART: -4643997 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#453 -> -16426 <- tig#68, A=1197 nt (start:1019, end:1040) B=189499 nt (start:36248, end:36227) CALCULATED DISTANCE APART: -16426 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#8 -> -3464017 <- tig#r.65, A=5070776 nt (start:1617068, end:1617089) B=286124 nt (start:255815, end:255836) CALCULATED DISTANCE APART: -3464017 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460269, end:460248) A=1345436 nt (start:25391, end:25370) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16900, end:16879) A=1227811 nt (start:6915, end:6894) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10153, end:10132) A=2766197 nt (start:2151410, end:2151389) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#4 -> -4480521 <- tig#6, B=3837743 nt (start:2243824, end:2243845) A=6870868 nt (start:2906602, end:2906581) CALCULATED DISTANCE APART: -4480521 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#46 -> -84483 <- tig#r.100, A=577887 nt (start:576103, end:576124) B=122157 nt (start:19458, end:19479) CALCULATED DISTANCE APART: -84483 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10473, end:10452) A=2766197 nt (start:2151090, end:2151069) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.257 -> -2902765 <- tig#8, B=1995 nt (start:1746, end:1725) A=5070776 nt (start:2921019, end:2920998) CALCULATED DISTANCE APART: -2902765 < -2000 Pairs unsatisfied in distance within a contig. Pair (GCCTTAGCATTCTGGGAGACG - AGTTTACCCCTTTGAGATGTG) on contig 15 (3712591 nt) Astart:3352422 Aend:3352443 Bstart:3377408 Bend:3377387 CALCULATED DISTANCE APART: 24986 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260822, end:2260843) B=356404 nt (start:342402, end:342423) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTTGTTTCCTGTTAATAGATA - GATTGATTTGACGAAATCTTA) on contig 19 (3531543 nt) Astart:3058623 Aend:3058602 Bstart:3050097 Bend:3050076 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260427, end:2260448) B=356404 nt (start:342797, end:342818) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728283, end:728304) A=1096 nt (start:368, end:347) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTTATGTTTATTTGGTGTTAG - ATAGCTGAAACCTAGTGTTTG) on contig 2 (5014909 nt) Astart:1268751 Aend:1268772 Bstart:1283413 Bend:1283392 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig. Pair (AAAAGAGGCAAAAAAATATAT - TGTTATAAACTTCGTGTCATG) on contig 6 (6870868 nt) Astart:1137974 Aend:1137953 Bstart:1129547 Bend:1129568 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.35 -> -772931 <- tig#95, B=1135475 nt (start:700807, end:700786) A=92653 nt (start:92124, end:92103) CALCULATED DISTANCE APART: -772931 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#43 -> -461668 <- tig#53, B=1235946 nt (start:923924, end:923945) A=354284 nt (start:169646, end:169625) CALCULATED DISTANCE APART: -461668 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TACAATTATATTTCTTCTGAA - ATACATGGAAATACCTACGGA) on contig 7 (3534247 nt) Astart:2257147 Aend:2257126 Bstart:2237636 Bend:2237615 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#120 -> -1341554 <- tig#29, B=44710 nt (start:43782, end:43803) A=1463708 nt (start:1360626, end:1360605) CALCULATED DISTANCE APART: -1341554 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -322558 <- tig#r.572, A=2650694 nt (start:2308765, end:2308786) B=1031 nt (start:402, end:423) CALCULATED DISTANCE APART: -322558 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#305 -> -2202335 <- tig#r.19, A=1638 nt (start:202, end:223) B=3531543 nt (start:1310644, end:1310665) CALCULATED DISTANCE APART: -2202335 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#265 -> -3126344 <- tig#4, A=1946 nt (start:1481, end:1502) B=3837743 nt (start:3145879, end:3145858) CALCULATED DISTANCE APART: -3126344 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.17 -> -4235404 <- tig#3, B=1959065 nt (start:1446441, end:1446420) A=3889482 nt (start:2808963, end:2808942) CALCULATED DISTANCE APART: -4235404 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219321, end:4219300) A=2598 nt (start:2300, end:2279) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#47 -> -583213 <- tig#r.69, A=471458 nt (start:10008, end:10029) B=186132 nt (start:44369, end:44390) CALCULATED DISTANCE APART: -583213 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17220, end:17199) A=1227811 nt (start:6595, end:6574) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.38 -> -1309655 <- tig#33, B=1143067 nt (start:1037349, end:1037328) A=1290487 nt (start:292306, end:292285) CALCULATED DISTANCE APART: -1309655 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#133 -> -163994 <- tig#47, A=34073 nt (start:3766, end:3787) B=471458 nt (start:153687, end:153666) CALCULATED DISTANCE APART: -163994 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.47 -> -199625 <- tig#2, B=471458 nt (start:121829, end:121808) A=5014909 nt (start:97796, end:97775) CALCULATED DISTANCE APART: -199625 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#46 -> -3500665 <- tig#6, B=577887 nt (start:567070, end:567091) A=6870868 nt (start:3509848, end:3509827) CALCULATED DISTANCE APART: -3500665 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.257 -> -2902765 <- tig#8, B=1995 nt (start:1346, end:1325) A=5070776 nt (start:2921419, end:2921398) CALCULATED DISTANCE APART: -2902765 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082647, end:2082668) B=976128 nt (start:960875, end:960896) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282677, end:282698) B=2196 nt (start:858, end:837) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTTGTTCAATATATAATTTTG - AATGAGTTTGGATTGGACGGG) on contig 71 (271268 nt) Astart:124134 Aend:124113 Bstart:118766 Bend:118787 CALCULATED DISTANCE APART: 5368 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#47 -> -583213 <- tig#r.69, A=471458 nt (start:9878, end:9899) B=186132 nt (start:44499, end:44520) CALCULATED DISTANCE APART: -583213 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185629, end:4185608) A=3712591 nt (start:932, end:911) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#9 -> -2729016 <- tig#69, A=3747885 nt (start:1134498, end:1134519) B=186132 nt (start:135629, end:135608) CALCULATED DISTANCE APART: -2729016 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#33 -> -492044 <- tig#32, A=1290487 nt (start:1235702, end:1235723) B=972151 nt (start:457259, end:457238) CALCULATED DISTANCE APART: -492044 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728298, end:728319) A=1096 nt (start:383, end:362) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#33 -> -492044 <- tig#32, A=1290487 nt (start:1235697, end:1235718) B=972151 nt (start:457254, end:457233) CALCULATED DISTANCE APART: -492044 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGCAACACACACTCTCTTTGT - AACTTATTACTTATATGTTTT) on contig 10 (3047199 nt) Astart:790139 Aend:790118 Bstart:776251 Bend:776272 CALCULATED DISTANCE APART: 13888 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -8119244 <- tig#6, B=3747885 nt (start:376480, end:376501) A=6870868 nt (start:4767839, end:4767818) CALCULATED DISTANCE APART: -8119244 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#48 -> -3151847 <- tig#12, B=487359 nt (start:40431, end:40452) A=2766197 nt (start:2724919, end:2724898) CALCULATED DISTANCE APART: -3151847 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTGTTAAACAACAGTAGATCC - CACCAGCTCGGTACAATTCGT) on contig 19 (3531543 nt) Astart:3059466 Aend:3059445 Bstart:3049257 Bend:3049236 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.47 -> -199675 <- tig#2, B=471458 nt (start:122249, end:122228) A=5014909 nt (start:97426, end:97405) CALCULATED DISTANCE APART: -199675 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAAACCAACACAAATCTCAAC - TGTAGATGGCCACACAAATAA) on contig 27 (1227811 nt) Astart:434600 Aend:434621 Bstart:450853 Bend:450832 CALCULATED DISTANCE APART: 16253 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#81 -> -2917495 <- tig#r.7, A=258617 nt (start:240654, end:240675) B=3534247 nt (start:614715, end:614736) CALCULATED DISTANCE APART: -2917495 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTTCAATTCGACAGTATCAGA - CATCAGCCTGGACGAGTTGGA) on contig 15 (3712591 nt) Astart:1718043 Aend:1718064 Bstart:1729975 Bend:1729996 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#52 -> -355614 <- tig#3, B=356404 nt (start:92, end:113) A=3889482 nt (start:19302, end:19281) CALCULATED DISTANCE APART: -355614 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#6 -> -40182 <- tig#91, A=6870868 nt (start:6825851, end:6825872) B=101959 nt (start:15165, end:15144) CALCULATED DISTANCE APART: -40182 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ACGAGTAAGATTAAAGTCAAC - AAGGAAATAAGTCAATAACAC) on contig 19 (3531543 nt) Astart:3059118 Aend:3059097 Bstart:3049602 Bend:3049581 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#34 -> -2271848 <- tig#31, A=1705564 nt (start:174166, end:174187) B=976128 nt (start:760450, end:760429) CALCULATED DISTANCE APART: -2271848 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATGGTTCAAAAAGAATTATAA - CACACGGAACAATCGATCTCT) on contig 75 (373953 nt) Astart:275785 Aend:275806 Bstart:300501 Bend:300480 CALCULATED DISTANCE APART: 24716 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#48 -> -127299 <- tig#r.65, A=487359 nt (start:470680, end:470701) B=286124 nt (start:155504, end:155525) CALCULATED DISTANCE APART: -127299 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#36 -> -228778 <- tig#r.41, A=855454 nt (start:790515, end:790536) B=667251 nt (start:483412, end:483433) CALCULATED DISTANCE APART: -228778 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.41 -> -1008083 <- tig#32, B=667251 nt (start:483305, end:483284) A=972151 nt (start:544778, end:544757) CALCULATED DISTANCE APART: -1008083 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#53 -> -314812 <- tig#75, B=354284 nt (start:24849, end:24870) A=373953 nt (start:5377, end:5356) CALCULATED DISTANCE APART: -314812 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGCCATCTTCATGGGACCAAA - TGGTCCTTTTTGCGAATGCTT) on contig 15 (3712591 nt) Astart:1716728 Aend:1716749 Bstart:1731290 Bend:1731311 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3583 <- tig#26, B=1171658 nt (start:1171363, end:1171384) A=1332708 nt (start:23288, end:23267) CALCULATED DISTANCE APART: -3583 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219381, end:4219360) A=2598 nt (start:2240, end:2219) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.257 -> -2902765 <- tig#8, B=1995 nt (start:1146, end:1125) A=5070776 nt (start:2921619, end:2921598) CALCULATED DISTANCE APART: -2902765 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#52 -> -356009 <- tig#3, B=356404 nt (start:137, end:158) A=3889482 nt (start:19742, end:19721) CALCULATED DISTANCE APART: -356009 < -2000 Pairs unsatisfied in distance within a contig. Pair (GATTCGGATGAATTCATTTCC - TCTAATCATTTCCAGCATCTT) on contig 1 (4853111 nt) Astart:346185 Aend:346206 Bstart:391462 Bend:391441 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig. Pair (TCTAACAAGGATACACTACTT - GCCTAAGTAGTGTATCCTTGT) on contig 53 (354284 nt) Astart:325801 Aend:325780 Bstart:325776 Bend:325797 CALCULATED DISTANCE APART: 25 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#305 -> -2202335 <- tig#r.19, A=1638 nt (start:282, end:303) B=3531543 nt (start:1310564, end:1310585) CALCULATED DISTANCE APART: -2202335 < -2000 Pairs unsatisfied in distance within a contig. Pair (GAAGATGAATTTGAGCATATT - CCTTCACTGCATTGATAATTA) on contig 2 (5014909 nt) Astart:1268476 Aend:1268497 Bstart:1283138 Bend:1283117 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in pairing logic within a contig. Pair (GGTCGCTTTGAGGTGGAACAA - GACCAAATAAGTTGACAAATC) on contig 14 (2271162 nt) Astart:658501 Aend:658480 Bstart:495410 Bend:495389 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -1335763 <- tig#4, B=3747885 nt (start:2857642, end:2857663) A=3837743 nt (start:465520, end:465499) CALCULATED DISTANCE APART: -1335763 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#52 -> -353986 <- tig#1, B=356404 nt (start:99, end:120) A=4853111 nt (start:17681, end:17660) CALCULATED DISTANCE APART: -353986 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ACTCTTTTGGTAACGAAAGTA - GGCTTGCCAAAAGAAATGTTT) on contig 19 (3531543 nt) Astart:3060141 Aend:3060120 Bstart:3048582 Bend:3048561 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.133 -> -1664052 <- tig#34, B=34073 nt (start:4756, end:4735) A=1705564 nt (start:1679296, end:1679275) CALCULATED DISTANCE APART: -1664052 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#265 -> -3126344 <- tig#4, A=1946 nt (start:1786, end:1807) B=3837743 nt (start:3146184, end:3146163) CALCULATED DISTANCE APART: -3126344 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3583 <- tig#26, B=1171658 nt (start:1171038, end:1171059) A=1332708 nt (start:22963, end:22942) CALCULATED DISTANCE APART: -3583 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#433 -> -944078 <- tig#r.29, A=1238 nt (start:496, end:517) B=1463708 nt (start:500372, end:500393) CALCULATED DISTANCE APART: -944078 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATCTTGCTCGTCTTCTTTCTT - TGCTATGCCTTTGCGGTTATT) on contig 5 (3689108 nt) Astart:1169952 Aend:1169973 Bstart:1185087 Bend:1185066 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#43 -> -460206 <- tig#53, B=1235946 nt (start:924326, end:924347) A=354284 nt (start:168586, end:168565) CALCULATED DISTANCE APART: -460206 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CTCAGATTTTTGTTTTGACTT - TGTAACATGTGAGAAATATGT) on contig 15 (3712591 nt) Astart:1718123 Aend:1718144 Bstart:1729895 Bend:1729916 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.46 -> -213331 <- tig#51, B=577887 nt (start:159898, end:159877) A=875428 nt (start:73433, end:73412) CALCULATED DISTANCE APART: -213331 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TATTGACTTGCAAACAAATCG - ACAAGAAGGATGAGAGGAAGT) on contig 15 (3712591 nt) Astart:1716758 Aend:1716779 Bstart:1731260 Bend:1731281 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.103 -> -86798 <- tig#165, B=211876 nt (start:104662, end:104641) A=13843 nt (start:2136, end:2115) CALCULATED DISTANCE APART: -86798 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.25 -> -1123940 <- tig#98, B=1290536 nt (start:1121791, end:1121770) A=88184 nt (start:22149, end:22128) CALCULATED DISTANCE APART: -1123940 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#51 -> -623213 <- tig#r.54, A=875428 nt (start:750785, end:750806) B=625914 nt (start:107344, end:107365) CALCULATED DISTANCE APART: -623213 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CCGATTTCGCCTAGGGTTTGT - GTACTTAGACCTAAACTCTAT) on contig 15 (3712591 nt) Astart:1717253 Aend:1717274 Bstart:1730765 Bend:1730786 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#19 -> -9908551 <- tig#6, A=3531543 nt (start:469401, end:469422) B=6870868 nt (start:6866409, end:6866388) CALCULATED DISTANCE APART: -9908551 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460749, end:460728) A=1345436 nt (start:24911, end:24890) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGAAGAGCTCTCCGCCGTAAA - CTACTACTTCAATAGAGAGAT) on contig 1 (4853111 nt) Astart:346025 Aend:346046 Bstart:391302 Bend:391281 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig. Pair (ACAACTATGAGCCACTCACTA - AAGAAGCGGCTTCCCCGGTAA) on contig 41 (667251 nt) Astart:88083 Aend:88062 Bstart:75403 Bend:75424 CALCULATED DISTANCE APART: 12680 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#34 -> -648420 <- tig#r.90, A=1705564 nt (start:1042325, end:1042346) B=112304 nt (start:107123, end:107144) CALCULATED DISTANCE APART: -648420 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#305 -> -2202335 <- tig#r.19, A=1638 nt (start:57, end:78) B=3531543 nt (start:1310789, end:1310810) CALCULATED DISTANCE APART: -2202335 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.132 -> -16308 <- tig#236, B=34686 nt (start:34668, end:34647) A=2565 nt (start:1640, end:1619) CALCULATED DISTANCE APART: -16308 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATTCTTGCTTCTCAAAGCTTT - TTGAGTATAACAACTTAAACC) on contig 84 (197079 nt) Astart:195673 Aend:195652 Bstart:196802 Bend:196823 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#7 -> -62553 <- tig#74, B=3534247 nt (start:3523312, end:3523333) A=238371 nt (start:71618, end:71597) CALCULATED DISTANCE APART: -62553 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AAAACACAAGCCAACGTCTAG - TTTCTAGATCAATCTTTATGT) on contig 15 (3712591 nt) Astart:1716618 Aend:1716639 Bstart:1731400 Bend:1731421 Pairs unsatisfied in distance within a contig. Pair (CCATCTCGTTAACAAGAAGCA - GGATCAGCGAATAATAATTTT) on contig 5 (3689108 nt) Astart:1171877 Aend:1171898 Bstart:1187013 Bend:1186992 CALCULATED DISTANCE APART: 15136 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728023, end:728044) A=1096 nt (start:108, end:87) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#12 -> -1284160 <- tig#25, A=2766197 nt (start:2563307, end:2563328) B=1290536 nt (start:1101270, end:1101249) CALCULATED DISTANCE APART: -1284160 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -418494 <- tig#46, A=736718 nt (start:457852, end:457873) B=577887 nt (start:159628, end:159607) CALCULATED DISTANCE APART: -418494 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#48 -> -156052 <- tig#51, B=487359 nt (start:406451, end:406472) A=875428 nt (start:95144, end:95123) CALCULATED DISTANCE APART: -156052 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#23 -> -761556 <- tig#18, B=1345436 nt (start:1334063, end:1334084) A=1738864 nt (start:770183, end:770162) CALCULATED DISTANCE APART: -761556 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -621133 <- tig#r.66, A=2766197 nt (start:2129733, end:2129754) B=201913 nt (start:197244, end:197265) CALCULATED DISTANCE APART: -621133 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGGGGGAAAAGGGATTTTCAT - GGCTTATGTATACAGGTAATT) on contig 6 (6870868 nt) Astart:1138734 Aend:1138713 Bstart:1130279 Bend:1130300 CALCULATED DISTANCE APART: 8455 Pairs unsatisfied in pairing logic within a contig. Pair (CTCTTACATCTGGCTCAACGA - CGCTCTTCATACGATGTATGT) on contig 15 (3712591 nt) Astart:1717028 Aend:1717049 Bstart:1730990 Bend:1731011 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#283 -> -3818458 <- tig#2, A=1768 nt (start:213, end:234) B=5014909 nt (start:3836903, end:3836882) CALCULATED DISTANCE APART: -3818458 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.46 -> -1210864 <- tig#16, B=577887 nt (start:502389, end:502368) A=2098954 nt (start:728475, end:728454) CALCULATED DISTANCE APART: -1210864 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAAACTTGTTGTCTGCTTACC - TGCAAACATTTCATATATACA) on contig 2 (5014909 nt) Astart:1268876 Aend:1268897 Bstart:1283538 Bend:1283517 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#118 -> -33564 <- tig#97, B=66247 nt (start:37882, end:37903) A=91050 nt (start:25199, end:25178) CALCULATED DISTANCE APART: -33564 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4186029, end:4186008) A=3712591 nt (start:532, end:511) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135703, end:135724) B=15068 nt (start:1973, end:1994) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGTAAATATTGATGAAGTATG - AAGAATAATGTAAGTTAGCAA) on contig 5 (3689108 nt) Astart:1178627 Aend:1178606 Bstart:1163493 Bend:1163514 CALCULATED DISTANCE APART: 15134 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#34 -> -7175 <- tig#129, A=1705564 nt (start:1679275, end:1679296) B=39603 nt (start:886, end:865) CALCULATED DISTANCE APART: -7175 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#34 -> -15928 <- tig#r.132, A=1705564 nt (start:1679275, end:1679296) B=34686 nt (start:25047, end:25068) CALCULATED DISTANCE APART: -15928 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185884, end:4185863) A=3712591 nt (start:677, end:656) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#39 -> -2984839 <- tig#12, B=736718 nt (start:457353, end:457374) A=2766197 nt (start:2725474, end:2725453) CALCULATED DISTANCE APART: -2984839 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#19 -> -1832843 <- tig#r.56, A=3531543 nt (start:1923448, end:1923469) B=262460 nt (start:17712, end:17733) CALCULATED DISTANCE APART: -1832843 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259297, end:2259318) B=356404 nt (start:343927, end:343948) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGTTTGAAAGGCAGGACGTAA - ATCATGTGGCCGAAGTTCTTG) on contig 2 (5014909 nt) Astart:1270076 Aend:1270097 Bstart:1284738 Bend:1284717 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig. Pair (TTTACTCTTTTCCTTTTTCTC - GGAATGCGCTCAAGAGGTTGT) on contig 43 (1235946 nt) Astart:243816 Aend:243795 Bstart:226406 Bend:226427 CALCULATED DISTANCE APART: 17410 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730087, end:730108) B=3531543 nt (start:3199661, end:3199640) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#74 -> -453293 <- tig#r.47, A=238371 nt (start:73318, end:73339) B=471458 nt (start:163218, end:163239) CALCULATED DISTANCE APART: -453293 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#58 -> -765518 <- tig#r.41, A=374416 nt (start:44364, end:44385) B=667251 nt (start:211785, end:211806) CALCULATED DISTANCE APART: -765518 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATGCACAAAATGACTCAAATT - CTGTTGCTGCATGTGTCATAT) on contig 6 (6870868 nt) Astart:1138059 Aend:1138038 Bstart:1129632 Bend:1129653 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig. Pair (TACGAAAGGTCTATTGACGAT - CTTAAAAGCGGTTGATACATC) on contig 1 (4853111 nt) Astart:346760 Aend:346781 Bstart:392037 Bend:392016 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#283 -> -3818458 <- tig#2, A=1768 nt (start:498, end:519) B=5014909 nt (start:3837188, end:3837167) CALCULATED DISTANCE APART: -3818458 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#120 -> -1341554 <- tig#29, B=44710 nt (start:43007, end:43028) A=1463708 nt (start:1359851, end:1359830) CALCULATED DISTANCE APART: -1341554 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730767, end:730788) B=3531543 nt (start:3200341, end:3200320) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTAAGTCATCTTGTTAACCAT - TTGTTCGACTGCACTTTGCAA) on contig 19 (3531543 nt) Astart:3058823 Aend:3058802 Bstart:3049897 Bend:3049876 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12531, end:12510) A=91302 nt (start:11662, end:11641) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#136 -> -15648 <- tig#r.174, A=49085 nt (start:18893, end:18914) B=11297 nt (start:5841, end:5862) CALCULATED DISTANCE APART: -15648 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCAACAGATGCATAGTCACCA - CAGATTCTTCTCAGCATCTTT) on contig 14 (2271162 nt) Astart:2001248 Aend:2001227 Bstart:1734481 Bend:1734502 CALCULATED DISTANCE APART: 266767 Pairs unsatisfied in distance within a contig. Pair (GAATGGGAGGTGGCGGCGGCA - ACTCTTCCACAAGAAGGTATG) on contig 5 (3689108 nt) Astart:1169722 Aend:1169743 Bstart:1184857 Bend:1184836 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig. Pair (AAAATCGATGTTGCATTGCAG - ATCTTCTTCTTTAGCACAAAA) on contig 5 (3689108 nt) Astart:1170107 Aend:1170128 Bstart:1185242 Bend:1185221 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.45 -> -5709644 <- tig#6, B=528133 nt (start:188618, end:188597) A=6870868 nt (start:5541026, end:5541005) CALCULATED DISTANCE APART: -5709644 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CAAGAATATTACCGCAATCAC - AATGGAGATATAAGAGTCTGC) on contig 19 (3531543 nt) Astart:3060096 Aend:3060075 Bstart:3048627 Bend:3048606 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.403 -> -2330792 <- tig#13, B=1321 nt (start:355, end:334) A=2650694 nt (start:2350437, end:2350416) CALCULATED DISTANCE APART: -2330792 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTATAAGATCAAAATATATAC - TAATGAACAAGTACATAGAAT) on contig 37 (853709 nt) Astart:838674 Aend:838653 Bstart:823169 Bend:823190 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17095, end:17074) A=1227811 nt (start:6720, end:6699) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#2 -> -607451 <- tig#56, A=5014909 nt (start:4622853, end:4622874) B=262460 nt (start:235395, end:235374) CALCULATED DISTANCE APART: -607451 < -2000 Pairs unsatisfied in distance within a contig. Pair (CATATAAAAGTTGGATTATGT - ATGTTGTTTCCCGACTTGCCA) on contig 14 (2271162 nt) Astart:1739877 Aend:1739898 Bstart:2002449 Bend:2002428 CALCULATED DISTANCE APART: 262572 Pairs unsatisfied in distance within a contig. Pair (ATTTCCAGTCAAAGCCGCGTA - CACTAGCCTCTTGCCTCTAAT) on contig 1 (4853111 nt) Astart:346200 Aend:346221 Bstart:391477 Bend:391456 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in pairing logic within a contig. Pair (TGATCTCTCTCGTCTTCTTCG - TGCCAACGGTTAGTCCCGGAC) on contig 15 (3712591 nt) Astart:1792071 Aend:1792050 Bstart:2056132 Bend:2056153 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2330, end:2351) A=258385 nt (start:866, end:845) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#34 -> -1056103 <- tig#r.65, A=1705564 nt (start:662451, end:662472) B=286124 nt (start:253134, end:253155) CALCULATED DISTANCE APART: -1056103 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.6 -> -5416206 <- tig#35, B=6870868 nt (start:4672205, end:4672184) A=1135475 nt (start:764001, end:763980) CALCULATED DISTANCE APART: -5416206 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTGACTTTTGTGTTAGGTTTT - TTCTCGTACGTAGATCTACGT) on contig 19 (3531543 nt) Astart:3058803 Aend:3058782 Bstart:3049917 Bend:3049896 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#43 -> -320297 <- tig#37, B=1235946 nt (start:935029, end:935050) A=853709 nt (start:39380, end:39359) CALCULATED DISTANCE APART: -320297 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460724, end:460703) A=1345436 nt (start:24936, end:24915) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GATACAACCTTTGTTTGTTTA - CTAGAAATGGTAAATAGATTT) on contig 15 (3712591 nt) Astart:1717588 Aend:1717609 Bstart:1730430 Bend:1730451 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#305 -> -2202335 <- tig#r.19, A=1638 nt (start:102, end:123) B=3531543 nt (start:1310744, end:1310765) CALCULATED DISTANCE APART: -2202335 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GAAAGAAATGGTTTGAGTGAC - TTCTCCTCGTAGTACTATTGA) on contig 19 (3531543 nt) Astart:3060231 Aend:3060210 Bstart:3048492 Bend:3048471 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185939, end:4185918) A=3712591 nt (start:622, end:601) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AATAGACATTCCGAGTAGATT - ACGAATCGTATCTTTAAACAT) on contig 19 (3531543 nt) Astart:3058173 Aend:3058152 Bstart:3050547 Bend:3050526 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33749, end:33728) A=855454 nt (start:18700, end:18679) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTCGCCTAGGGTTTGTGCTTG - ATGATGTACTTAGACCTAAAC) on contig 15 (3712591 nt) Astart:1717258 Aend:1717279 Bstart:1730760 Bend:1730781 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#283 -> -3818458 <- tig#2, A=1768 nt (start:403, end:424) B=5014909 nt (start:3837093, end:3837072) CALCULATED DISTANCE APART: -3818458 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAGGTGTTGCTCCATCTCTTT - GTAAACTTTTAGTAAAATGTC) on contig 5 (3689108 nt) Astart:1178252 Aend:1178231 Bstart:1163118 Bend:1163139 CALCULATED DISTANCE APART: 15134 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#77 -> -122338 <- tig#99, B=160344 nt (start:25184, end:25205) A=88102 nt (start:7178, end:7157) CALCULATED DISTANCE APART: -122338 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.6 -> -5416200 <- tig#35, B=6870868 nt (start:4671944, end:4671923) A=1135475 nt (start:764256, end:764235) CALCULATED DISTANCE APART: -5416200 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2340, end:2361) A=258385 nt (start:876, end:855) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#39 -> -500696 <- tig#r.30, A=736718 nt (start:679366, end:679387) B=1050452 nt (start:587108, end:587129) CALCULATED DISTANCE APART: -500696 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16495, end:16474) A=1227811 nt (start:7320, end:7299) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig. Pair (ACCAGCCGGGCCAGGAGCCGG - AATCATTGGTAAACAAATCAA) on contig 37 (853709 nt) Astart:839034 Aend:839013 Bstart:823529 Bend:823550 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.140 -> -147248 <- tig#70, B=26310 nt (start:11110, end:11089) A=236880 nt (start:156138, end:156117) CALCULATED DISTANCE APART: -147248 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#54 -> -612862 <- tig#49, B=625914 nt (start:36387, end:36408) A=399963 nt (start:43335, end:43314) CALCULATED DISTANCE APART: -612862 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGTTTCAACAAATGGTGAATC - ATGACGTCGGACAGTGTCATG) on contig 2 (5014909 nt) Astart:1269986 Aend:1270007 Bstart:1284648 Bend:1284627 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259392, end:2259413) B=356404 nt (start:343832, end:343853) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.39 -> -384043 <- tig#56, B=736718 nt (start:333663, end:333642) A=262460 nt (start:70380, end:70359) CALCULATED DISTANCE APART: -384043 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136738, end:136759) B=15068 nt (start:938, end:959) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10728, end:10707) A=2766197 nt (start:2150835, end:2150814) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.32 -> -5808936 <- tig#6, B=972151 nt (start:287175, end:287154) A=6870868 nt (start:5541761, end:5541740) CALCULATED DISTANCE APART: -5808936 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#11 -> -5298498 <- tig#r.19, A=4628067 nt (start:147083, end:147104) B=3531543 nt (start:2694029, end:2694050) CALCULATED DISTANCE APART: -5298498 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219351, end:4219330) A=2598 nt (start:2270, end:2249) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.42 -> -1433157 <- tig#20, B=659641 nt (start:2328, end:2307) A=2328057 nt (start:1450829, end:1450808) CALCULATED DISTANCE APART: -1433157 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CCTAAGTATCTAGTGAGATTT - GTGAGTATGCGGAGATGAGAA) on contig 15 (3712591 nt) Astart:1717473 Aend:1717494 Bstart:1730545 Bend:1730566 Pairs unsatisfied in pairing logic within a contig. Pair (TTCTCAAGAGTTTCTTTCTTC - TTGTTGTTTTTCTTTTCGTTT) on contig 15 (3712591 nt) Astart:1716548 Aend:1716569 Bstart:1731470 Bend:1731491 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259797, end:2259818) B=356404 nt (start:343427, end:343448) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TGTTGTCAAAAAAAGAAGAAG - TATTAAATATGCCAAGATTGT) on contig 15 (3712591 nt) Astart:1719408 Aend:1719429 Bstart:1728610 Bend:1728631 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#118 -> -33564 <- tig#97, B=66247 nt (start:37562, end:37583) A=91050 nt (start:24879, end:24858) CALCULATED DISTANCE APART: -33564 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -40662 <- tig#443, A=736718 nt (start:676886, end:676907) B=1213 nt (start:830, end:809) CALCULATED DISTANCE APART: -40662 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4186134, end:4186113) A=3712591 nt (start:427, end:406) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.38 -> -1310007 <- tig#33, B=1143067 nt (start:1039134, end:1039113) A=1290487 nt (start:290873, end:290852) CALCULATED DISTANCE APART: -1310007 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTGGCGTCTCAGGCAAAGATG - TGGCCACACATGAAACATGAT) on contig 30 (1050452 nt) Astart:649939 Aend:649960 Bstart:665705 Bend:665684 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in distance within a contig. Pair (AAGCTATTACTCAGAGTTATC - TTTGGTATTCTAGACATGAAA) on contig 13 (2650694 nt) Astart:2351047 Aend:2351026 Bstart:2336108 Bend:2336129 CALCULATED DISTANCE APART: 14939 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16780, end:16759) A=1227811 nt (start:7035, end:7014) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#6 -> -45255 <- tig#75, B=6870868 nt (start:6825298, end:6825319) A=373953 nt (start:19685, end:19664) CALCULATED DISTANCE APART: -45255 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -7514397 <- tig#2, B=4628067 nt (start:4149972, end:4149951) A=5014909 nt (start:3384425, end:3384404) CALCULATED DISTANCE APART: -7514397 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#64 -> -210549 <- tig#109, B=211265 nt (start:817, end:838) A=66564 nt (start:20101, end:20080) CALCULATED DISTANCE APART: -210549 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16265, end:16244) A=1227811 nt (start:7550, end:7529) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260147, end:2260168) B=356404 nt (start:343077, end:343098) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#26 -> -3719054 <- tig#7, A=1332708 nt (start:142680, end:142701) B=3534247 nt (start:2549026, end:2549005) CALCULATED DISTANCE APART: -3719054 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459209, end:459188) A=1345436 nt (start:26451, end:26430) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459564, end:459543) A=1345436 nt (start:26096, end:26075) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATCTTGAAGCCCAAGGCAACA - TTCACAGGACATGACTCTTGC) on contig 6 (6870868 nt) Astart:1137809 Aend:1137788 Bstart:1129382 Bend:1129403 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig. Pair (CAACGATGATCTGAAACCAGA - GTTGCATTGCATGCTTGTAAA) on contig 29 (1463708 nt) Astart:122952 Aend:122931 Bstart:100885 Bend:100906 CALCULATED DISTANCE APART: 22067 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#64 -> -210568 <- tig#109, B=211265 nt (start:63, end:84) A=66564 nt (start:19366, end:19345) CALCULATED DISTANCE APART: -210568 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.257 -> -2902765 <- tig#8, B=1995 nt (start:1491, end:1470) A=5070776 nt (start:2921274, end:2921253) CALCULATED DISTANCE APART: -2902765 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17145, end:17124) A=1227811 nt (start:6670, end:6649) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig. Pair (GTAGTCAGTAATATAAGTCTG - GTCGCTAACACCGAGCTCTGC) on contig 41 (667251 nt) Astart:88488 Aend:88467 Bstart:75808 Bend:75829 CALCULATED DISTANCE APART: 12680 Pairs unsatisfied in pairing logic within a contig. Pair (GATTCGGGTCGAAACATAGTG - TTTAACGTTAGGTTTAATAAA) on contig 15 (3712591 nt) Astart:1718213 Aend:1718234 Bstart:1729805 Bend:1729826 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#70 -> -123179 <- tig#122, A=236880 nt (start:108768, end:108789) B=43035 nt (start:15067, end:15046) CALCULATED DISTANCE APART: -123179 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.38 -> -1310113 <- tig#33, B=1143067 nt (start:1039539, end:1039518) A=1290487 nt (start:290574, end:290553) CALCULATED DISTANCE APART: -1310113 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282887, end:282908) B=2196 nt (start:1068, end:1047) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259552, end:2259573) B=356404 nt (start:343672, end:343693) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAAAAACCAATCAATCTTCTT - CAATACATGTTTTAGAGCCGG) on contig 5 (3689108 nt) Astart:1178377 Aend:1178356 Bstart:1163243 Bend:1163264 CALCULATED DISTANCE APART: 15134 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#51 -> -486163 <- tig#r.46, A=875428 nt (start:750490, end:750511) B=577887 nt (start:196662, end:196683) CALCULATED DISTANCE APART: -486163 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#77 -> -122338 <- tig#99, B=160344 nt (start:25104, end:25125) A=88102 nt (start:7098, end:7077) CALCULATED DISTANCE APART: -122338 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ACTTTCCACATTGCTTAATTG - TCAGATACCTCTCAGGTCGAG) on contig 9 (3747885 nt) Astart:2878234 Aend:2878213 Bstart:2862931 Bend:2862910 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -621133 <- tig#r.66, A=2766197 nt (start:2129323, end:2129344) B=201913 nt (start:197654, end:197675) CALCULATED DISTANCE APART: -621133 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#42 -> -1103003 <- tig#r.43, A=659641 nt (start:546553, end:546574) B=1235946 nt (start:226031, end:226052) CALCULATED DISTANCE APART: -1103003 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CCAAACCTTTGGTCGCTTTGA - GTTGACAAATCAAGATAAACT) on contig 14 (2271162 nt) Astart:658511 Aend:658490 Bstart:495400 Bend:495379 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282607, end:282628) B=2196 nt (start:788, end:767) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#3 -> -819933 <- tig#117, A=3889482 nt (start:3054613, end:3054634) B=48188 nt (start:5064, end:5043) CALCULATED DISTANCE APART: -819933 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTTCTGAAAAACCAGTCATCA - ACTTTGAAAGAAAGTAAATCA) on contig 4 (3837743 nt) Astart:2358386 Aend:2358407 Bstart:2359676 Bend:2359697 Pairs unsatisfied in pairing logic within a contig. Pair (AAATGCGAATGGCTTGGCAAA - TCGGTTGGTGGTGCGTATAAA) on contig 15 (3712591 nt) Astart:1717498 Aend:1717519 Bstart:1730520 Bend:1730541 Pairs unsatisfied in pairing logic within a contig. Pair (CTTCTAACAAGGATACACTAC - TAACAAGGATACACTACTTAG) on contig 53 (354284 nt) Astart:325803 Aend:325782 Bstart:325799 Bend:325778 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:134528, end:134549) B=15068 nt (start:3148, end:3169) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig. Pair (GTTATACAAGTGGAGGAGAAA - AATCTAACACATAGATAAATG) on contig 5 (3689108 nt) Astart:1178307 Aend:1178286 Bstart:1163173 Bend:1163194 CALCULATED DISTANCE APART: 15134 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.54 -> -24615 <- tig#165, B=625914 nt (start:42919, end:42898) A=13843 nt (start:1696, end:1675) CALCULATED DISTANCE APART: -24615 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -1335762 <- tig#4, B=3747885 nt (start:2857377, end:2857398) A=3837743 nt (start:465254, end:465233) CALCULATED DISTANCE APART: -1335762 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TCTATTGGTTTGACTATATAT - CAAGTCTCCAGTTAGTGGCTT) on contig 19 (3531543 nt) Astart:3059766 Aend:3059745 Bstart:3048957 Bend:3048936 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.257 -> -2902765 <- tig#8, B=1995 nt (start:1466, end:1445) A=5070776 nt (start:2921299, end:2921278) CALCULATED DISTANCE APART: -2902765 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#43 -> -676653 <- tig#56, A=1235946 nt (start:637841, end:637862) B=262460 nt (start:98548, end:98527) CALCULATED DISTANCE APART: -676653 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TCGGTCTCTTACATCTGGCTC - TTCATACGATGTATGTGATCT) on contig 15 (3712591 nt) Astart:1717023 Aend:1717044 Bstart:1730995 Bend:1731016 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#103 -> -188044 <- tig#521, A=211876 nt (start:4834, end:4855) B=1100 nt (start:1002, end:981) CALCULATED DISTANCE APART: -188044 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTGAATCTGTGCATGAAAAAC - ACCAATTCTTTAACACTCTGC) on contig 2 (5014909 nt) Astart:1269871 Aend:1269892 Bstart:1284533 Bend:1284512 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728843, end:728864) A=1096 nt (start:928, end:907) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATTAGAGACTGGTTTACTTCT - TATAGGAGATTTGTCATGGAA) on contig 30 (1050452 nt) Astart:650734 Aend:650755 Bstart:666500 Bend:666479 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#11 -> -5083518 <- tig#19, B=4628067 nt (start:2218607, end:2218628) A=3531543 nt (start:2694058, end:2694037) CALCULATED DISTANCE APART: -5083518 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGGTGTTGAAACCATTAATTG - ACCACACGAGAGACAGGACAA) on contig 1 (4853111 nt) Astart:346880 Aend:346901 Bstart:392157 Bend:392136 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#3 -> -833035 <- tig#r.111, A=3889482 nt (start:3066637, end:3066658) B=72605 nt (start:42415, end:42436) CALCULATED DISTANCE APART: -833035 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#167 -> -1674340 <- tig#34, B=25236 nt (start:10189, end:10210) A=1705564 nt (start:1679293, end:1679272) CALCULATED DISTANCE APART: -1674340 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#67 -> -163343 <- tig#51, B=197815 nt (start:180225, end:180246) A=875428 nt (start:165753, end:165732) CALCULATED DISTANCE APART: -163343 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#10 -> -2925313 <- tig#9, A=3047199 nt (start:251211, end:251232) B=3747885 nt (start:149325, end:149304) CALCULATED DISTANCE APART: -2925313 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#10 -> -2925312 <- tig#9, A=3047199 nt (start:251211, end:251232) B=3747885 nt (start:149324, end:149303) CALCULATED DISTANCE APART: -2925312 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4186269, end:4186248) A=3712591 nt (start:292, end:271) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGGGCCTTTAATGGGTCAAAA - AATTAAACCTGGGAGCATGAC) on contig 1 (4853111 nt) Astart:345960 Aend:345981 Bstart:391237 Bend:391216 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig. Pair (CTTCTCTCGTATGATTCATTC - ACAGCTTGAAACAACAAACAA) on contig 1 (4853111 nt) Astart:346265 Aend:346286 Bstart:391542 Bend:391521 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#10 -> -2925312 <- tig#9, A=3047199 nt (start:251221, end:251242) B=3747885 nt (start:149334, end:149313) CALCULATED DISTANCE APART: -2925312 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#10 -> -2925313 <- tig#9, A=3047199 nt (start:251221, end:251242) B=3747885 nt (start:149335, end:149314) CALCULATED DISTANCE APART: -2925313 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTTAAACATGATCATGAAGTT - TGAGTCTGAAGTTCCATTAAG) on contig 6 (6870868 nt) Astart:1139164 Aend:1139143 Bstart:1130681 Bend:1130702 CALCULATED DISTANCE APART: 8483 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.42 -> -1433157 <- tig#20, B=659641 nt (start:2383, end:2362) A=2328057 nt (start:1450774, end:1450753) CALCULATED DISTANCE APART: -1433157 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:1800, end:1821) A=258385 nt (start:336, end:315) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33569, end:33548) A=855454 nt (start:18880, end:18859) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#37 -> -1821163 <- tig#25, A=853709 nt (start:114456, end:114477) B=1290536 nt (start:1101910, end:1101889) CALCULATED DISTANCE APART: -1821163 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGATATGGCTCTATCTTTCCA - CATTTATGTACTATTTCAATG) on contig 6 (6870868 nt) Astart:1138204 Aend:1138183 Bstart:1129777 Bend:1129798 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#30 -> -556808 <- tig#80, A=1050452 nt (start:648974, end:648995) B=191116 nt (start:175330, end:175309) CALCULATED DISTANCE APART: -556808 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#329 -> -177487 <- tig#84, A=1505 nt (start:839, end:860) B=197079 nt (start:196821, end:196800) CALCULATED DISTANCE APART: -177487 < -2000 Pairs unsatisfied in distance within a contig. Pair (CAAGAAAATTTCGTAATTGGC - TTTAAAGTAGTTAGTGGTTCA) on contig 34 (1705564 nt) Astart:680109 Aend:680088 Bstart:665146 Bend:665167 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#64 -> -210568 <- tig#109, B=211265 nt (start:168, end:189) A=66564 nt (start:19471, end:19450) CALCULATED DISTANCE APART: -210568 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATCAGTACAATTATATTTCTT - TGGAAATACCTACGGATATGT) on contig 7 (3534247 nt) Astart:2257152 Aend:2257131 Bstart:2237631 Bend:2237610 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -322558 <- tig#r.572, A=2650694 nt (start:2308520, end:2308541) B=1031 nt (start:647, end:668) CALCULATED DISTANCE APART: -322558 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16185, end:16164) A=1227811 nt (start:7630, end:7609) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#6 -> -3712398 <- tig#1, A=6870868 nt (start:5007457, end:5007478) B=4853111 nt (start:1868987, end:1868966) CALCULATED DISTANCE APART: -3712398 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730202, end:730223) B=3531543 nt (start:3199776, end:3199755) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.31 -> -1935964 <- tig#5, B=976128 nt (start:608681, end:608660) A=3689108 nt (start:1347283, end:1347262) CALCULATED DISTANCE APART: -1935964 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2095, end:2116) A=258385 nt (start:631, end:610) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33584, end:33563) A=855454 nt (start:18865, end:18844) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGATGCATAGTCACCAAGAAC - TCAAACAGATTCTTCTCAGCA) on contig 14 (2271162 nt) Astart:2001243 Aend:2001222 Bstart:1734476 Bend:1734497 CALCULATED DISTANCE APART: 266767 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -3959278 <- tig#2, B=3747885 nt (start:2104285, end:2104306) A=5014909 nt (start:2335678, end:2335657) CALCULATED DISTANCE APART: -3959278 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12091, end:12070) A=91302 nt (start:12102, end:12081) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730282, end:730303) B=3531543 nt (start:3199856, end:3199835) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728443, end:728464) A=1096 nt (start:528, end:507) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTGTGGTTTATAACTTATAAG - TTTTTATGGACGAATTCTCGA) on contig 5 (3689108 nt) Astart:1169397 Aend:1169418 Bstart:1184532 Bend:1184511 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#77 -> -122338 <- tig#99, B=160344 nt (start:24859, end:24880) A=88102 nt (start:6853, end:6832) CALCULATED DISTANCE APART: -122338 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#265 -> -3126344 <- tig#4, A=1946 nt (start:1611, end:1632) B=3837743 nt (start:3146009, end:3145988) CALCULATED DISTANCE APART: -3126344 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#590 -> -1631326 <- tig#r.34, A=1018 nt (start:457, end:478) B=1705564 nt (start:54799, end:54820) CALCULATED DISTANCE APART: -1631326 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#3 -> -3148938 <- tig#14, A=3889482 nt (start:2724268, end:2724289) B=2271162 nt (start:2003724, end:2003703) CALCULATED DISTANCE APART: -3148938 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.403 -> -2330792 <- tig#13, B=1321 nt (start:510, end:489) A=2650694 nt (start:2350282, end:2350261) CALCULATED DISTANCE APART: -2330792 < -2000 Pairs unsatisfied in distance within a contig. Pair (TAAAGGCGTAAGAATTGTATC - ACAAGGATACAATTCTTACGC) on contig 34 (1705564 nt) Astart:1679278 Aend:1679299 Bstart:1679304 Bend:1679283 CALCULATED DISTANCE APART: 26 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#34 -> -332091 <- tig#53, A=1705564 nt (start:1679278, end:1679299) B=354284 nt (start:325805, end:325784) CALCULATED DISTANCE APART: -332091 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#34 -> -203106 <- tig#84, A=1705564 nt (start:1679278, end:1679299) B=197079 nt (start:196820, end:196799) CALCULATED DISTANCE APART: -203106 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#34 -> -16498 <- tig#167, A=1705564 nt (start:1679278, end:1679299) B=25236 nt (start:10212, end:10191) CALCULATED DISTANCE APART: -16498 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGTCTTAAAATGTCTTGAATA - TGTTTAACTTTTAGAGCAAGC) on contig 37 (853709 nt) Astart:538492 Aend:538513 Bstart:551165 Bend:551144 CALCULATED DISTANCE APART: 12673 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.31 -> -769542 <- tig#32, B=976128 nt (start:199370, end:199349) A=972151 nt (start:590172, end:590151) CALCULATED DISTANCE APART: -769542 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGACTTACACTGTTCTACTCA - GTTCAACGGCATGTTGGCTTC) on contig 1 (4853111 nt) Astart:346990 Aend:347011 Bstart:392267 Bend:392246 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728898, end:728919) A=1096 nt (start:983, end:962) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730037, end:730058) B=3531543 nt (start:3199611, end:3199590) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCATGACTCAAGAACATATAA - ATCTTGGTTCCATTCTTCTTC) on contig 1 (4853111 nt) Astart:346670 Aend:346691 Bstart:391947 Bend:391926 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#52 -> -354278 <- tig#1, B=356404 nt (start:127, end:148) A=4853111 nt (start:18001, end:17980) CALCULATED DISTANCE APART: -354278 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AATATTCTATTGGTTTGACTA - CTCCAGTTAGTGGCTTCCGAA) on contig 19 (3531543 nt) Astart:3059771 Aend:3059750 Bstart:3048952 Bend:3048931 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082602, end:2082623) B=976128 nt (start:960920, end:960941) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in distance within a contig. Pair (GCAACGAGATTTTGGGAATGG - GGTATGATTCTCATATGAGAG) on contig 5 (3689108 nt) Astart:1169707 Aend:1169728 Bstart:1184842 Bend:1184821 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in pairing logic within a contig. Pair (GTAATCATGAGACCAAGTCAT - TAACATATTTATAAGGCAGAC) on contig 19 (3531543 nt) Astart:3058463 Aend:3058442 Bstart:3050257 Bend:3050236 Pairs unsatisfied in pairing logic within a contig. Pair (ACGTGTCATTTTTCAATTCGA - GACGAGTTGGAGAACAAGAAG) on contig 15 (3712591 nt) Astart:1718033 Aend:1718054 Bstart:1729985 Bend:1730006 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.34 -> -1659328 <- tig#279, B=1705564 nt (start:1679299, end:1679278) A=1777 nt (start:29, end:8) CALCULATED DISTANCE APART: -1659328 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ACAGACCATACAAAAAATAAT - CTACCTAATGTCACAAATAAA) on contig 4 (3837743 nt) Astart:2358126 Aend:2358147 Bstart:2359936 Bend:2359957 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728198, end:728219) A=1096 nt (start:283, end:262) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig. Pair (CCTCTTTATATAGTCAAAACG - AGGCGCTCAGACCATTGTTGA) on contig 43 (1235946 nt) Astart:243896 Aend:243875 Bstart:226486 Bend:226507 CALCULATED DISTANCE APART: 17410 Pairs unsatisfied in pairing logic within a contig. Pair (CAACACGGTTCTTCTTCGTCT - TGCGAAAAAATGGAAAACACC) on contig 15 (3712591 nt) Astart:1717003 Aend:1717024 Bstart:1731015 Bend:1731036 Pairs unsatisfied in distance within a contig. Pair (ACCCAAAGTTCTCAAATATCA - TTGACATTTTATATCAATTCT) on contig 13 (2650694 nt) Astart:1947135 Aend:1947156 Bstart:1962783 Bend:1962762 CALCULATED DISTANCE APART: 15648 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -40662 <- tig#443, A=736718 nt (start:676826, end:676847) B=1213 nt (start:770, end:749) CALCULATED DISTANCE APART: -40662 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATGGAGATGAAATTTAGAATT - TATGCGACTAGAGAGTGAAGA) on contig 19 (3531543 nt) Astart:3058713 Aend:3058692 Bstart:3050007 Bend:3049986 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#19 -> -2537248 <- tig#r.40, A=3531543 nt (start:1004908, end:1004929) B=668174 nt (start:637561, end:637582) CALCULATED DISTANCE APART: -2537248 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#79 -> -614150 <- tig#r.2, A=136600 nt (start:76407, end:76428) B=5014909 nt (start:4440952, end:4440973) CALCULATED DISTANCE APART: -614150 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.28 -> -4041595 <- tig#8, B=1171658 nt (start:690011, end:689990) A=5070776 nt (start:3371584, end:3371563) CALCULATED DISTANCE APART: -4041595 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATGAGAATTCGCATGGGGAAA - TAATAACTCAAACGCCGGAGT) on contig 6 (6870868 nt) Astart:2439933 Aend:2439954 Bstart:2446760 Bend:2446781 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219506, end:4219485) A=2598 nt (start:2115, end:2094) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#265 -> -3126344 <- tig#4, A=1946 nt (start:1641, end:1662) B=3837743 nt (start:3146039, end:3146018) CALCULATED DISTANCE APART: -3126344 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#26 -> -90650 <- tig#95, B=1332708 nt (start:1310563, end:1310584) A=92653 nt (start:88505, end:88484) CALCULATED DISTANCE APART: -90650 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -214291 <- tig#6, A=354284 nt (start:133106, end:133127) B=6870868 nt (start:13113, end:13092) CALCULATED DISTANCE APART: -214291 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.403 -> -2330792 <- tig#13, B=1321 nt (start:915, end:894) A=2650694 nt (start:2349877, end:2349856) CALCULATED DISTANCE APART: -2330792 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGCGATAATGATGAAGAAACT - CAAGTACACAAACATGACATT) on contig 1 (4853111 nt) Astart:346425 Aend:346446 Bstart:391702 Bend:391681 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2655, end:2676) A=258385 nt (start:1191, end:1170) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -4201 <- tig#r.96, A=262460 nt (start:244351, end:244372) B=91302 nt (start:85210, end:85231) CALCULATED DISTANCE APART: -4201 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728103, end:728124) A=1096 nt (start:188, end:167) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:729972, end:729993) B=3531543 nt (start:3199546, end:3199525) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730452, end:730473) B=3531543 nt (start:3200026, end:3200005) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGTCTTTCACTGTGATGGCTT - TTATAAGTACGGACATACTAA) on contig 7 (3534247 nt) Astart:502249 Aend:502270 Bstart:3249643 Bend:3249622 CALCULATED DISTANCE APART: 2747394 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -1335763 <- tig#4, B=3747885 nt (start:2857562, end:2857583) A=3837743 nt (start:465440, end:465419) CALCULATED DISTANCE APART: -1335763 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259882, end:2259903) B=356404 nt (start:343342, end:343363) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082762, end:2082783) B=976128 nt (start:960760, end:960781) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TACAACTTGCACACACAAACC - AAAATCATCGACTTGGACTCT) on contig 19 (3531543 nt) Astart:3060311 Aend:3060290 Bstart:3048412 Bend:3048391 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -3661458 <- tig#r.3, A=262460 nt (start:68611, end:68632) B=3889482 nt (start:401873, end:401894) CALCULATED DISTANCE APART: -3661458 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTCTTTGTATTTGGGAAACGA - GAGAGAGGAAAGAGCAACAAC) on contig 2 (5014909 nt) Astart:1268666 Aend:1268687 Bstart:1283328 Bend:1283307 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282832, end:282853) B=2196 nt (start:1013, end:992) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4186124, end:4186103) A=3712591 nt (start:437, end:416) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTCTTCATTCGATTCGGATGA - TCCAGCATCTTTGTAGCATTG) on contig 1 (4853111 nt) Astart:346175 Aend:346196 Bstart:391452 Bend:391431 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.403 -> -2330792 <- tig#13, B=1321 nt (start:745, end:724) A=2650694 nt (start:2350047, end:2350026) CALCULATED DISTANCE APART: -2330792 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219386, end:4219365) A=2598 nt (start:2235, end:2214) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#147 -> -2122509 <- tig#6, A=21323 nt (start:6653, end:6674) B=6870868 nt (start:2127839, end:2127818) CALCULATED DISTANCE APART: -2122509 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTTTAGGTATCCGATTTCGCC - CTAAACTCTATTATTAGTTTG) on contig 15 (3712591 nt) Astart:1717243 Aend:1717264 Bstart:1730775 Bend:1730796 Pairs unsatisfied in distance within a contig. Pair (TGATCTCTTCAAACTCTTCCC - AGGTGTAACTTAAAAGTTGAA) on contig 15 (3712591 nt) Astart:3352282 Aend:3352303 Bstart:3377268 Bend:3377247 CALCULATED DISTANCE APART: 24986 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.115 -> -3755846 <- tig#9, B=66709 nt (start:40953, end:40932) A=3747885 nt (start:3734893, end:3734872) CALCULATED DISTANCE APART: -3755846 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#75 -> -1731898 <- tig#19, A=373953 nt (start:296411, end:296432) B=3531543 nt (start:1674356, end:1674335) CALCULATED DISTANCE APART: -1731898 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#6 -> -40182 <- tig#91, A=6870868 nt (start:6825946, end:6825967) B=101959 nt (start:15260, end:15239) CALCULATED DISTANCE APART: -40182 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#146 -> -25215 <- tig#r.139, A=21489 nt (start:2836, end:2857) B=27696 nt (start:1134, end:1155) CALCULATED DISTANCE APART: -25215 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12326, end:12305) A=91302 nt (start:11867, end:11846) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#47 -> -583213 <- tig#r.69, A=471458 nt (start:9868, end:9889) B=186132 nt (start:44509, end:44530) CALCULATED DISTANCE APART: -583213 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#120 -> -1341555 <- tig#29, B=44710 nt (start:44341, end:44362) A=1463708 nt (start:1361186, end:1361165) CALCULATED DISTANCE APART: -1341555 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GGTTCATAGAGCTGATCACTC - GTTTTATTTTGTGTTGATCTC) on contig 15 (3712591 nt) Astart:1716918 Aend:1716939 Bstart:1731100 Bend:1731121 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185809, end:4185788) A=3712591 nt (start:752, end:731) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGATGAAGTTTATGATATATG - GATCAGAGATAACCTAAAGAA) on contig 6 (6870868 nt) Astart:1138694 Aend:1138673 Bstart:1130239 Bend:1130260 CALCULATED DISTANCE APART: 8455 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#31 -> -3401904 <- tig#4, A=976128 nt (start:201347, end:201368) B=3837743 nt (start:2647123, end:2647102) CALCULATED DISTANCE APART: -3401904 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -6170543 <- tig#6, B=5014909 nt (start:649172, end:649151) A=6870868 nt (start:5541371, end:5541350) CALCULATED DISTANCE APART: -6170543 < -2000 Pairs unsatisfied in distance within a contig. Pair (GGGAATACATACAGGTGAACA - TTTCATTCATTGCCTGCTTAT) on contig 14 (2271162 nt) Astart:2001173 Aend:2001152 Bstart:1734406 Bend:1734427 CALCULATED DISTANCE APART: 266767 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#37 -> -1821163 <- tig#25, A=853709 nt (start:114206, end:114227) B=1290536 nt (start:1101660, end:1101639) CALCULATED DISTANCE APART: -1821163 < -2000 Pairs unsatisfied in distance within a contig. Pair (AACTCAGGAAAATGGATTGTA - TTGAACCGATGCGATGAGTCA) on contig 2 (5014909 nt) Astart:1268951 Aend:1268972 Bstart:1283613 Bend:1283592 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.42 -> -1433157 <- tig#20, B=659641 nt (start:2398, end:2377) A=2328057 nt (start:1450759, end:1450738) CALCULATED DISTANCE APART: -1433157 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10523, end:10502) A=2766197 nt (start:2151040, end:2151019) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136033, end:136054) B=15068 nt (start:1643, end:1664) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10598, end:10577) A=2766197 nt (start:2150965, end:2150944) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12411, end:12390) A=91302 nt (start:11782, end:11761) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#10 -> -2925313 <- tig#9, A=3047199 nt (start:251216, end:251237) B=3747885 nt (start:149330, end:149309) CALCULATED DISTANCE APART: -2925313 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#10 -> -2925312 <- tig#9, A=3047199 nt (start:251216, end:251237) B=3747885 nt (start:149329, end:149308) CALCULATED DISTANCE APART: -2925312 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AAATAAGATGTGAAAAATAAA - CTTCCACTTCAGCTTGAAGGG) on contig 19 (3531543 nt) Astart:3059546 Aend:3059525 Bstart:3049177 Bend:3049156 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#19 -> -9908551 <- tig#6, A=3531543 nt (start:469351, end:469372) B=6870868 nt (start:6866359, end:6866338) CALCULATED DISTANCE APART: -9908551 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728778, end:728799) A=1096 nt (start:863, end:842) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#119 -> -7707 <- tig#r.49, A=46878 nt (start:31770, end:31791) B=399963 nt (start:387364, end:387385) CALCULATED DISTANCE APART: -7707 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#34 -> -63808 <- tig#r.86, A=1705564 nt (start:1679282, end:1679303) B=280231 nt (start:222705, end:222726) CALCULATED DISTANCE APART: -63808 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#34 -> -42645 <- tig#r.131, A=1705564 nt (start:1679282, end:1679303) B=36503 nt (start:140, end:161) CALCULATED DISTANCE APART: -42645 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#34 -> -332088 <- tig#53, A=1705564 nt (start:1679282, end:1679303) B=354284 nt (start:325806, end:325785) CALCULATED DISTANCE APART: -332088 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#34 -> -6321 <- tig#r.132, A=1705564 nt (start:1679282, end:1679303) B=34686 nt (start:34647, end:34668) CALCULATED DISTANCE APART: -6321 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#34 -> -6322 <- tig#r.132, A=1705564 nt (start:1679282, end:1679303) B=34686 nt (start:34646, end:34667) CALCULATED DISTANCE APART: -6322 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.38 -> -1310113 <- tig#33, B=1143067 nt (start:1039454, end:1039433) A=1290487 nt (start:290659, end:290638) CALCULATED DISTANCE APART: -1310113 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.46 -> -213331 <- tig#51, B=577887 nt (start:159968, end:159947) A=875428 nt (start:73363, end:73342) CALCULATED DISTANCE APART: -213331 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#104 -> -41347 <- tig#r.7, A=97911 nt (start:45439, end:45460) B=3534247 nt (start:3525372, end:3525393) CALCULATED DISTANCE APART: -41347 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#9 -> -2729018 <- tig#69, A=3747885 nt (start:1134206, end:1134227) B=186132 nt (start:135339, end:135318) CALCULATED DISTANCE APART: -2729018 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATTTTTGCATAATTACGAACT - AACCATTCTGAAATCTTATAA) on contig 19 (3531543 nt) Astart:3059263 Aend:3059242 Bstart:3049457 Bend:3049436 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#32 -> -635088 <- tig#7, B=972151 nt (start:533395, end:533416) A=3534247 nt (start:216332, end:216311) CALCULATED DISTANCE APART: -635088 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#167 -> -119421 <- tig#r.63, A=25236 nt (start:10193, end:10214) B=274372 nt (start:149994, end:150015) CALCULATED DISTANCE APART: -119421 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#167 -> -4347 <- tig#r.132, A=25236 nt (start:10193, end:10214) B=34686 nt (start:25382, end:25403) CALCULATED DISTANCE APART: -4347 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17415, end:17394) A=1227811 nt (start:6400, end:6379) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2575, end:2596) A=258385 nt (start:1111, end:1090) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#52 -> -354278 <- tig#1, B=356404 nt (start:137, end:158) A=4853111 nt (start:18011, end:17990) CALCULATED DISTANCE APART: -354278 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#48 -> -3151847 <- tig#12, B=487359 nt (start:40661, end:40682) A=2766197 nt (start:2725149, end:2725128) CALCULATED DISTANCE APART: -3151847 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#136 -> -49732 <- tig#122, B=49085 nt (start:911, end:932) A=43035 nt (start:21558, end:21537) CALCULATED DISTANCE APART: -49732 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259692, end:2259713) B=356404 nt (start:343532, end:343553) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33329, end:33308) A=855454 nt (start:19120, end:19099) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#4 -> -3798683 <- tig#16, B=3837743 nt (start:350935, end:350956) A=2098954 nt (start:331875, end:331854) CALCULATED DISTANCE APART: -3798683 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CACCAAAAATTAATTATGAGT - ATATGTAAATATAATAAGTAA) on contig 15 (3712591 nt) Astart:1717168 Aend:1717189 Bstart:1730850 Bend:1730871 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#48 -> -585449 <- tig#46, A=487359 nt (start:41948, end:41969) B=577887 nt (start:160038, end:160017) CALCULATED DISTANCE APART: -585449 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.38 -> -1426766 <- tig#29, B=1143067 nt (start:1039574, end:1039553) A=1463708 nt (start:407192, end:407171) CALCULATED DISTANCE APART: -1426766 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.403 -> -2330792 <- tig#13, B=1321 nt (start:425, end:404) A=2650694 nt (start:2350367, end:2350346) CALCULATED DISTANCE APART: -2330792 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGCCGGTGTGGCATACTTGGG - AGTTGCAGAGAAATCTAAGCA) on contig 15 (3712591 nt) Astart:3350125 Aend:3350146 Bstart:3375113 Bend:3375092 CALCULATED DISTANCE APART: 24988 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2985, end:3006) A=258385 nt (start:1521, end:1500) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#51 -> -548585 <- tig#79, B=875428 nt (start:391141, end:391162) A=136600 nt (start:84298, end:84277) CALCULATED DISTANCE APART: -548585 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -1436807 <- tig#39, B=3747885 nt (start:2893049, end:2893070) A=736718 nt (start:601971, end:601950) CALCULATED DISTANCE APART: -1436807 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:729842, end:729863) B=3531543 nt (start:3199416, end:3199395) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig. Pair (AACAGCTTGTTGAATTAACTT - TCATTAAAGGGTCCCAATGAA) on contig 2 (5014909 nt) Astart:1269151 Aend:1269172 Bstart:1283813 Bend:1283792 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#74 -> -258226 <- tig#56, B=238371 nt (start:58981, end:59002) A=262460 nt (start:98836, end:98815) CALCULATED DISTANCE APART: -258226 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CCGTCCATGACAACTAACTTA - TTGTAAGTATGGTTAATTAAT) on contig 15 (3712591 nt) Astart:1716823 Aend:1716844 Bstart:1731195 Bend:1731216 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282452, end:282473) B=2196 nt (start:633, end:612) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATGATTCATTCTTCTACTTAT - GGGATCTTTAACAGCTTGAAA) on contig 1 (4853111 nt) Astart:346275 Aend:346296 Bstart:391552 Bend:391531 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2261067, end:2261088) B=356404 nt (start:342157, end:342178) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.6 -> -5416206 <- tig#35, B=6870868 nt (start:4672210, end:4672189) A=1135475 nt (start:763996, end:763975) CALCULATED DISTANCE APART: -5416206 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460499, end:460478) A=1345436 nt (start:25161, end:25140) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#433 -> -944078 <- tig#r.29, A=1238 nt (start:911, end:932) B=1463708 nt (start:499957, end:499978) CALCULATED DISTANCE APART: -944078 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -1168778 <- tig#384, A=5070776 nt (start:3882380, end:3882401) B=1359 nt (start:382, end:361) CALCULATED DISTANCE APART: -1168778 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#10 -> -2837213 <- tig#45, B=3047199 nt (start:392999, end:393020) A=528133 nt (start:203013, end:202992) CALCULATED DISTANCE APART: -2837213 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.6 -> -33388 <- tig#115, B=6870868 nt (start:12348, end:12327) A=66709 nt (start:41040, end:41019) CALCULATED DISTANCE APART: -33388 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#34 -> -877091 <- tig#r.90, A=1705564 nt (start:813799, end:813820) B=112304 nt (start:106978, end:106999) CALCULATED DISTANCE APART: -877091 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12406, end:12385) A=91302 nt (start:11787, end:11766) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#12 -> -2083947 <- tig#47, A=2766197 nt (start:947688, end:947709) B=471458 nt (start:285438, end:285417) CALCULATED DISTANCE APART: -2083947 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -418494 <- tig#46, A=736718 nt (start:457952, end:457973) B=577887 nt (start:159728, end:159707) CALCULATED DISTANCE APART: -418494 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#9 -> -3369808 <- tig#22, A=3747885 nt (start:358188, end:358209) B=1636463 nt (start:111, end:90) CALCULATED DISTANCE APART: -3369808 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGCTTCCTAGATTGAGCCGAA - AAAGTAAAAGGTAAAGATATG) on contig 15 (3712591 nt) Astart:3350355 Aend:3350376 Bstart:3375343 Bend:3375322 CALCULATED DISTANCE APART: 24988 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.409 -> -1019852 <- tig#23, B=1303 nt (start:751, end:730) A=1345436 nt (start:1039101, end:1039080) CALCULATED DISTANCE APART: -1019852 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#25 -> -666259 <- tig#2, B=1290536 nt (start:852922, end:852943) A=5014909 nt (start:248645, end:248624) CALCULATED DISTANCE APART: -666259 < -2000 Pairs unsatisfied in distance within a contig. Pair (CAGACGTCATTGTAGAGAACA - TATCTGATGTAGTACAGCTCT) on contig 123 (42452 nt) Astart:14646 Aend:14625 Bstart:1514 Bend:1535 CALCULATED DISTANCE APART: 13132 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730482, end:730503) B=3531543 nt (start:3200056, end:3200035) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#11 -> -6130585 <- tig#5, A=4628067 nt (start:1179165, end:1179186) B=3689108 nt (start:2701683, end:2701662) CALCULATED DISTANCE APART: -6130585 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#47 -> -347215 <- tig#53, B=471458 nt (start:285518, end:285539) A=354284 nt (start:181275, end:181254) CALCULATED DISTANCE APART: -347215 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082427, end:2082448) B=976128 nt (start:961095, end:961116) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#19 -> -3098757 <- tig#47, A=3531543 nt (start:470161, end:470182) B=471458 nt (start:57375, end:57354) CALCULATED DISTANCE APART: -3098757 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#7 -> -3853079 <- tig#36, A=3534247 nt (start:146159, end:146180) B=855454 nt (start:484991, end:484970) CALCULATED DISTANCE APART: -3853079 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#73 -> -115952 <- tig#r.85, A=171056 nt (start:152236, end:152257) B=121353 nt (start:4221, end:4242) CALCULATED DISTANCE APART: -115952 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.22 -> -757174 <- tig#37, B=1636463 nt (start:338758, end:338737) A=853709 nt (start:438416, end:438395) CALCULATED DISTANCE APART: -757174 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.84 -> -129073 <- tig#120, B=197079 nt (start:125136, end:125115) A=44710 nt (start:23937, end:23916) CALCULATED DISTANCE APART: -129073 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATACATACTCCAACGAAGAGT - TATATGCGGTCGAAAAACTTG) on contig 19 (3531543 nt) Astart:3058378 Aend:3058357 Bstart:3050342 Bend:3050321 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33414, end:33393) A=855454 nt (start:19035, end:19014) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTTGATAATGAACTTAGAGCC - CGCTTCTGTGTAAACTGTTGC) on contig 2 (5014909 nt) Astart:1270036 Aend:1270057 Bstart:1284698 Bend:1284677 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.101 -> -46827 <- tig#107, B=84691 nt (start:24044, end:24023) A=68734 nt (start:42783, end:42762) CALCULATED DISTANCE APART: -46827 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730292, end:730313) B=3531543 nt (start:3199866, end:3199845) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#103 -> -1235093 <- tig#25, A=211876 nt (start:58648, end:58669) B=1290536 nt (start:1101865, end:1101844) CALCULATED DISTANCE APART: -1235093 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#6 -> -3007884 <- tig#29, A=6870868 nt (start:4553294, end:4553315) B=1463708 nt (start:710310, end:710289) CALCULATED DISTANCE APART: -3007884 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#37 -> -1821163 <- tig#25, A=853709 nt (start:114201, end:114222) B=1290536 nt (start:1101655, end:1101634) CALCULATED DISTANCE APART: -1821163 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CACATTGTATTTGTTCATACA - TCAATTTCCGTCTCAAATACT) on contig 19 (3531543 nt) Astart:3059416 Aend:3059395 Bstart:3049307 Bend:3049286 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728203, end:728224) A=1096 nt (start:288, end:267) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.35 -> -676591 <- tig#2, B=1135475 nt (start:599460, end:599439) A=5014909 nt (start:97131, end:97110) CALCULATED DISTANCE APART: -676591 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460099, end:460078) A=1345436 nt (start:25561, end:25540) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig. Pair (GGCAGGGCTACTCTTGAATGT - TTCTTTCGGGTTTAAAGTTCA) on contig 5 (3689108 nt) Astart:1170127 Aend:1170148 Bstart:1185262 Bend:1185241 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10488, end:10467) A=2766197 nt (start:2151075, end:2151054) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -1168778 <- tig#384, A=5070776 nt (start:3882375, end:3882396) B=1359 nt (start:377, end:356) CALCULATED DISTANCE APART: -1168778 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.21 -> -483124 <- tig#109, B=1811326 nt (start:483883, end:483862) A=66564 nt (start:19241, end:19220) CALCULATED DISTANCE APART: -483124 < -2000 Pairs unsatisfied in distance within a contig. Pair (GATTTTCATTTGAATCTATTG - CTTATAGCTAACAACACATTT) on contig 2 (5014909 nt) Astart:1268546 Aend:1268567 Bstart:1283208 Bend:1283187 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082802, end:2082823) B=976128 nt (start:960720, end:960741) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TAGATTTAAGAAAAGGGATAT - AGAAAAATGTGAGATCGAAAA) on contig 19 (3531543 nt) Astart:3059361 Aend:3059340 Bstart:3049362 Bend:3049341 Pairs unsatisfied in distance within a contig. Pair (CTTAAAGGCGTAAGAATTGTA - AACAAGGATACAATTCTTACG) on contig 34 (1705564 nt) Astart:1679276 Aend:1679297 Bstart:1679305 Bend:1679284 CALCULATED DISTANCE APART: 29 Pairs unsatisfied in distance within a contig. Pair (CTTAAAGGCGTAAGAATTGTA - TAACAAGGATACAATTCTTAC) on contig 34 (1705564 nt) Astart:1679276 Aend:1679297 Bstart:1679306 Bend:1679285 CALCULATED DISTANCE APART: 30 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#34 -> -203107 <- tig#84, A=1705564 nt (start:1679276, end:1679297) B=197079 nt (start:196819, end:196798) CALCULATED DISTANCE APART: -203107 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TCATCTTGTTAACCATTGACT - CTACGTTGTTCGACTGCACTT) on contig 19 (3531543 nt) Astart:3058818 Aend:3058797 Bstart:3049902 Bend:3049881 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#53 -> -24524 <- tig#2, B=354284 nt (start:340739, end:340760) A=5014909 nt (start:30979, end:30958) CALCULATED DISTANCE APART: -24524 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.328 -> -54701 <- tig#102, B=1508 nt (start:1196, end:1175) A=83426 nt (start:73505, end:73484) CALCULATED DISTANCE APART: -54701 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATTTTTAACTAACTCAGGAAA - GCGATGAGTCAAACCTATCAT) on contig 2 (5014909 nt) Astart:1268941 Aend:1268962 Bstart:1283603 Bend:1283582 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17530, end:17509) A=1227811 nt (start:6285, end:6264) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#19 -> -1649636 <- tig#31, A=3531543 nt (start:1878747, end:1878768) B=976128 nt (start:16840, end:16819) CALCULATED DISTANCE APART: -1649636 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#127 -> -717436 <- tig#r.33, A=80830 nt (start:20216, end:20237) B=1290487 nt (start:613665, end:613686) CALCULATED DISTANCE APART: -717436 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282037, end:282058) B=2196 nt (start:218, end:197) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CATAATGAAAACGCAATTTTT - ATAACTCTATTATCTAACTTC) on contig 5 (3689108 nt) Astart:506906 Aend:506885 Bstart:921575 Bend:921554 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282992, end:283013) B=2196 nt (start:1173, end:1152) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#37 -> -738605 <- tig#r.53, A=853709 nt (start:109434, end:109455) B=354284 nt (start:339954, end:339975) CALCULATED DISTANCE APART: -738605 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#26 -> -90650 <- tig#95, B=1332708 nt (start:1310478, end:1310499) A=92653 nt (start:88420, end:88399) CALCULATED DISTANCE APART: -90650 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGTCACCAAGCAAACCATTGT - GTGTGAGTCGAGTGAGCTCAA) on contig 27 (1227811 nt) Astart:434445 Aend:434466 Bstart:450698 Bend:450677 CALCULATED DISTANCE APART: 16253 Pairs unsatisfied in distance within a contig. Pair (ATGGAGAAGGAACTTATAAGG - AGCACCACTCTGCCTCATATT) on contig 27 (1227811 nt) Astart:434700 Aend:434721 Bstart:450953 Bend:450932 CALCULATED DISTANCE APART: 16253 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459954, end:459933) A=1345436 nt (start:25706, end:25685) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TCTGTTTCTACGGTGGATGAT - TCTTAATTAGTAGTAGTGTTT) on contig 15 (3712591 nt) Astart:1792141 Aend:1792120 Bstart:2056202 Bend:2056223 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.12 -> -433254 <- tig#78, B=2766197 nt (start:323113, end:323092) A=184063 nt (start:130141, end:130120) CALCULATED DISTANCE APART: -433254 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.19 -> -1163378 <- tig#75, B=3531543 nt (start:1172006, end:1171985) A=373953 nt (start:11372, end:11351) CALCULATED DISTANCE APART: -1163378 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17215, end:17194) A=1227811 nt (start:6600, end:6579) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TGAATATTATCAAGAATATTA - TAAGAGTCTGCTAGAGTCGCT) on contig 19 (3531543 nt) Astart:3060106 Aend:3060085 Bstart:3048617 Bend:3048596 Pairs unsatisfied in distance within a contig. Pair (GGAAACTATTTTGAAACCATA - ATAGAAGTTTCTGGGAAGAGA) on contig 6 (6870868 nt) Astart:1138774 Aend:1138753 Bstart:1130319 Bend:1130340 CALCULATED DISTANCE APART: 8455 Pairs unsatisfied in distance within a contig. Pair (GTATACTGCCTACAATGTTAA - AGTCACTTTTGGAAAACATTG) on contig 30 (1050452 nt) Astart:649599 Aend:649620 Bstart:665365 Bend:665344 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in distance within a contig. Pair (CCTATTTGAGTTGTGTTTAAA - TGGCTGCCTTAAAATATTATA) on contig 37 (853709 nt) Astart:839114 Aend:839093 Bstart:823609 Bend:823630 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459849, end:459828) A=1345436 nt (start:25811, end:25790) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig. Pair (GATGGCATGCTATATACATAT - TCACTTACCAATAACTCTAAA) on contig 34 (1705564 nt) Astart:679549 Aend:679528 Bstart:664586 Bend:664607 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in pairing logic within a contig. Pair (TTAATGGACTCGTCAATTTCT - ATCACGGAAGAAGACTTTGGT) on contig 3 (3889482 nt) Astart:2808563 Aend:2808542 Bstart:2767895 Bend:2767874 Pairs unsatisfied in distance within a contig. Pair (ATAAAATTCATCTTTTAGGTT - TTCATTCCTACTCATAACACT) on contig 60 (232804 nt) Astart:31342 Aend:31363 Bstart:57620 Bend:57599 CALCULATED DISTANCE APART: 26278 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259622, end:2259643) B=356404 nt (start:343602, end:343623) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -40662 <- tig#443, A=736718 nt (start:676741, end:676762) B=1213 nt (start:685, end:664) CALCULATED DISTANCE APART: -40662 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GAGAAACAATAATCTCTCTTT - ACAAAACCCAAACTTGCATTG) on contig 19 (3531543 nt) Astart:3060001 Aend:3059980 Bstart:3048722 Bend:3048701 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.91 -> -51057 <- tig#31, B=101959 nt (start:15580, end:15559) A=976128 nt (start:55477, end:55456) CALCULATED DISTANCE APART: -51057 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#265 -> -3126344 <- tig#4, A=1946 nt (start:1796, end:1817) B=3837743 nt (start:3146194, end:3146173) CALCULATED DISTANCE APART: -3126344 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#148 -> -836235 <- tig#r.36, A=35830 nt (start:33894, end:33915) B=855454 nt (start:1155, end:1176) CALCULATED DISTANCE APART: -836235 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136448, end:136469) B=15068 nt (start:1228, end:1249) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAAATATTTATTTTTACTAAC - AGATTGCTAGGGAAGTTATGG) on contig 109 (66564 nt) Astart:5649 Aend:5628 Bstart:13 Bend:34 CALCULATED DISTANCE APART: 5636 Pairs unsatisfied in distance within a contig. Pair (GAAAAATTAGATGATTAAACT - TGCGAGGATGCTTTTCAGGAA) on contig 131 (36503 nt) Astart:30917 Aend:30896 Bstart:14547 Bend:14568 CALCULATED DISTANCE APART: 16370 Pairs unsatisfied in distance within a contig. Pair (TCCTTTTTCTCATCAAACTCC - TCAGAGCTACGGAATGCGCTC) on contig 43 (1235946 nt) Astart:243806 Aend:243785 Bstart:226396 Bend:226417 CALCULATED DISTANCE APART: 17410 Pairs unsatisfied in pairing logic within a contig. Pair (CTCATTTGACTAACTTCTTTT - GTCAAATATCTTTGATTTGAG) on contig 19 (3531543 nt) Astart:3058948 Aend:3058927 Bstart:3049772 Bend:3049751 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#9 -> -6067963 <- tig#12, A=3747885 nt (start:357943, end:357964) B=2766197 nt (start:2698021, end:2698000) CALCULATED DISTANCE APART: -6067963 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459134, end:459113) A=1345436 nt (start:26526, end:26505) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig. Pair (GAAAGGCAGGACGTAAAGCAC - TCCGCATCATGTGGCCGAAGT) on contig 2 (5014909 nt) Astart:1270081 Aend:1270102 Bstart:1284743 Bend:1284722 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730912, end:730933) B=3531543 nt (start:3200486, end:3200465) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCATTATAGGCCTGCAAAACC - AAAATACCCAGCGAGTGAAGA) on contig 15 (3712591 nt) Astart:3349975 Aend:3349996 Bstart:3374963 Bend:3374942 CALCULATED DISTANCE APART: 24988 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#51 -> -1001622 <- tig#r.77, A=875428 nt (start:813, end:834) B=160344 nt (start:13337, end:13358) CALCULATED DISTANCE APART: -1001622 < -2000 Pairs unsatisfied in distance within a contig. Pair (CCGGGCCAGGAGCCGGAGCAG - ACAATAATCATTGGTAAACAA) on contig 37 (853709 nt) Astart:839029 Aend:839008 Bstart:823524 Bend:823545 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in pairing logic within a contig. Pair (ATCGCCAATCTCCGATGATCG - GAATTTAAGGCAATGTTTTCT) on contig 15 (3712591 nt) Astart:1792316 Aend:1792295 Bstart:2056372 Bend:2056393 Pairs unsatisfied in pairing logic within a contig. Pair (AAGGTTTTACTAATCAAGTAT - ACTCGTAACCACGTCGAAATA) on contig 19 (3531543 nt) Astart:3058578 Aend:3058557 Bstart:3050142 Bend:3050121 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730757, end:730778) B=3531543 nt (start:3200331, end:3200310) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig. Pair (GTGGAGAAGATAGATGAATTA - AGAACAAGAACGCATAGGGTA) on contig 2 (5014909 nt) Astart:1269311 Aend:1269332 Bstart:1283973 Bend:1283952 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12331, end:12310) A=91302 nt (start:11862, end:11841) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAACTAGATTTATCACATGAT - CTTTCCATCTGGAAGAGGTTC) on contig 1 (4853111 nt) Astart:346560 Aend:346581 Bstart:391837 Bend:391816 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#127 -> -208845 <- tig#r.20, A=80830 nt (start:73490, end:73511) B=2328057 nt (start:2106552, end:2106573) CALCULATED DISTANCE APART: -208845 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TGACTTGCATATTTTTCCTGA - CTGCAAGAATATTGTTGTAAC) on contig 15 (3712591 nt) Astart:1718138 Aend:1718159 Bstart:1729880 Bend:1729901 Pairs unsatisfied in distance within a contig. Pair (TTATGCTAGTTCTCGAGATCC - AAAACTGATGATGCATTGCAT) on contig 30 (1050452 nt) Astart:649704 Aend:649725 Bstart:665470 Bend:665449 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in distance within a contig. Pair (TGAGTAGTTTTTTATGTGCTC - TGGAAAAAAGAAGACTGGGAT) on contig 37 (853709 nt) Astart:538732 Aend:538753 Bstart:551402 Bend:551381 CALCULATED DISTANCE APART: 12670 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.43 -> -310233 <- tig#67, B=1235946 nt (start:265887, end:265866) A=197815 nt (start:64346, end:64325) CALCULATED DISTANCE APART: -310233 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#47 -> -293197 <- tig#6, A=471458 nt (start:171899, end:171920) B=6870868 nt (start:13638, end:13617) CALCULATED DISTANCE APART: -293197 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGGAGTCGTTTTAATGTGTTT - AGGGTGGAAGGGAGGCTTGGA) on contig 25 (1290536 nt) Astart:990159 Aend:990138 Bstart:975625 Bend:975646 CALCULATED DISTANCE APART: 14534 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -1263675 <- tig#29, A=736718 nt (start:407172, end:407193) B=1463708 nt (start:954129, end:954108) CALCULATED DISTANCE APART: -1263675 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -40662 <- tig#443, A=736718 nt (start:676426, end:676447) B=1213 nt (start:370, end:349) CALCULATED DISTANCE APART: -40662 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -1168778 <- tig#384, A=5070776 nt (start:3882660, end:3882681) B=1359 nt (start:662, end:641) CALCULATED DISTANCE APART: -1168778 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459304, end:459283) A=1345436 nt (start:26356, end:26335) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.257 -> -2902765 <- tig#8, B=1995 nt (start:1596, end:1575) A=5070776 nt (start:2921169, end:2921148) CALCULATED DISTANCE APART: -2902765 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -3878119 <- tig#7, B=3747885 nt (start:2103603, end:2103624) A=3534247 nt (start:2253837, end:2253816) CALCULATED DISTANCE APART: -3878119 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#12 -> -167604 <- tig#557, B=2766197 nt (start:2579509, end:2579530) A=1050 nt (start:916, end:895) CALCULATED DISTANCE APART: -167604 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#12 -> -167604 <- tig#557, B=2766197 nt (start:2579429, end:2579450) A=1050 nt (start:836, end:815) CALCULATED DISTANCE APART: -167604 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#34 -> -1107967 <- tig#79, A=1705564 nt (start:661826, end:661847) B=136600 nt (start:84229, end:84208) CALCULATED DISTANCE APART: -1107967 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -621133 <- tig#r.66, A=2766197 nt (start:2129398, end:2129419) B=201913 nt (start:197579, end:197600) CALCULATED DISTANCE APART: -621133 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.4 -> -2312101 <- tig#96, B=3837743 nt (start:2294600, end:2294579) A=91302 nt (start:37501, end:37480) CALCULATED DISTANCE APART: -2312101 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.6 -> -5416199 <- tig#35, B=6870868 nt (start:4671863, end:4671842) A=1135475 nt (start:764336, end:764315) CALCULATED DISTANCE APART: -5416199 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33864, end:33843) A=855454 nt (start:18585, end:18564) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGGTACAGAGCATTTAAGGCA - AGCTGAGATAGAGTGCTTCAG) on contig 27 (1227811 nt) Astart:434580 Aend:434601 Bstart:450833 Bend:450812 CALCULATED DISTANCE APART: 16253 Pairs unsatisfied in distance within a contig. Pair (AGGAGAAGGTGTTGCTCCATC - CTTTTAGTAAAATGTCATCAC) on contig 5 (3689108 nt) Astart:1178257 Aend:1178236 Bstart:1163123 Bend:1163144 CALCULATED DISTANCE APART: 15134 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259772, end:2259793) B=356404 nt (start:343452, end:343473) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#22 -> -6369342 <- tig#6, B=1636463 nt (start:14535, end:14556) A=6870868 nt (start:4767414, end:4767393) CALCULATED DISTANCE APART: -6369342 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.155 -> -199872 <- tig#62, B=18420 nt (start:15956, end:15935) A=354710 nt (start:203916, end:203895) CALCULATED DISTANCE APART: -199872 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -322558 <- tig#r.572, A=2650694 nt (start:2308635, end:2308656) B=1031 nt (start:532, end:553) CALCULATED DISTANCE APART: -322558 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#106 -> -120131 <- tig#85, B=117163 nt (start:27776, end:27797) A=121353 nt (start:50744, end:50723) CALCULATED DISTANCE APART: -120131 < -2000 Pairs unsatisfied in distance within a contig. Pair (GATAATTCTTCCAAGTATTAT - TCTTCGTGAGCTTAGAAAGGA) on contig 2 (5014909 nt) Astart:1269021 Aend:1269042 Bstart:1283683 Bend:1283662 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3583 <- tig#26, B=1171658 nt (start:1171133, end:1171154) A=1332708 nt (start:23058, end:23037) CALCULATED DISTANCE APART: -3583 < -2000 Pairs unsatisfied in distance within a contig. Pair (CATAGTCACCAAGAACTGAAA - GCCGATCAAACAGATTCTTCT) on contig 14 (2271162 nt) Astart:2001238 Aend:2001217 Bstart:1734471 Bend:1734492 CALCULATED DISTANCE APART: 266767 Pairs unsatisfied in pairing logic within a contig. Pair (TAGGAATATAACTGGAGAACA - AGAACTTGGAGGGTTCTATTT) on contig 15 (3712591 nt) Astart:1717883 Aend:1717904 Bstart:1730135 Bend:1730156 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#26 -> -90650 <- tig#95, B=1332708 nt (start:1310588, end:1310609) A=92653 nt (start:88530, end:88509) CALCULATED DISTANCE APART: -90650 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10163, end:10142) A=2766197 nt (start:2151400, end:2151379) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#41 -> -193683 <- tig#r.31, A=667251 nt (start:483406, end:483427) B=976128 nt (start:946290, end:946311) CALCULATED DISTANCE APART: -193683 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.403 -> -2330792 <- tig#13, B=1321 nt (start:385, end:364) A=2650694 nt (start:2350407, end:2350386) CALCULATED DISTANCE APART: -2330792 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -3661475 <- tig#r.3, A=262460 nt (start:68601, end:68622) B=3889482 nt (start:401866, end:401887) CALCULATED DISTANCE APART: -3661475 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -3661476 <- tig#r.3, A=262460 nt (start:68601, end:68622) B=3889482 nt (start:401865, end:401886) CALCULATED DISTANCE APART: -3661476 < -2000 Pairs unsatisfied in distance within a contig. Pair (CCAAGGGAGCGATCGAAAGCG - AGCAAGAAAGCTCAGTACAGA) on contig 15 (3712591 nt) Astart:3352512 Aend:3352533 Bstart:3377498 Bend:3377477 CALCULATED DISTANCE APART: 24986 Pairs unsatisfied in pairing logic within a contig. Pair (ACATTCCGAGTAGATTTTCGG - TTCTTACGAATCGTATCTTTA) on contig 19 (3531543 nt) Astart:3058168 Aend:3058147 Bstart:3050552 Bend:3050531 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#22 -> -6369340 <- tig#6, B=1636463 nt (start:14777, end:14798) A=6870868 nt (start:4767654, end:4767633) CALCULATED DISTANCE APART: -6369340 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.51 -> -247947 <- tig#2, B=875428 nt (start:65608, end:65587) A=5014909 nt (start:202339, end:202318) CALCULATED DISTANCE APART: -247947 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:134903, end:134924) B=15068 nt (start:2773, end:2794) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#46 -> -523125 <- tig#r.48, A=577887 nt (start:135694, end:135715) B=487359 nt (start:386427, end:386448) CALCULATED DISTANCE APART: -523125 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#26 -> -90650 <- tig#95, B=1332708 nt (start:1310428, end:1310449) A=92653 nt (start:88370, end:88349) CALCULATED DISTANCE APART: -90650 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260732, end:2260753) B=356404 nt (start:342492, end:342513) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#67 -> -163343 <- tig#51, B=197815 nt (start:180385, end:180406) A=875428 nt (start:165913, end:165892) CALCULATED DISTANCE APART: -163343 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -214292 <- tig#6, A=354284 nt (start:133890, end:133911) B=6870868 nt (start:13898, end:13877) CALCULATED DISTANCE APART: -214292 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AACAGAGAGAGCCGTTGTATA - GCTTTAATAATTATTGTCAAC) on contig 15 (3712591 nt) Astart:1792034 Aend:1792013 Bstart:2056097 Bend:2056118 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730362, end:730383) B=3531543 nt (start:3199936, end:3199915) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082832, end:2082853) B=976128 nt (start:960690, end:960711) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4186024, end:4186003) A=3712591 nt (start:537, end:516) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.12 -> -2913010 <- tig#41, B=2766197 nt (start:2675328, end:2675307) A=667251 nt (start:257682, end:257661) CALCULATED DISTANCE APART: -2913010 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#74 -> -258393 <- tig#56, A=238371 nt (start:58943, end:58964) B=262460 nt (start:98965, end:98944) CALCULATED DISTANCE APART: -258393 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -40662 <- tig#443, A=736718 nt (start:676496, end:676517) B=1213 nt (start:440, end:419) CALCULATED DISTANCE APART: -40662 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260347, end:2260368) B=356404 nt (start:342877, end:342898) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#51 -> -548580 <- tig#79, B=875428 nt (start:390846, end:390867) A=136600 nt (start:83998, end:83977) CALCULATED DISTANCE APART: -548580 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TCTTTCCGGCCGTTGTTCTGA - TGATTTTCCTACATGTTCTTA) on contig 19 (3531543 nt) Astart:3060161 Aend:3060140 Bstart:3048562 Bend:3048541 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#81 -> -2917593 <- tig#r.7, A=258617 nt (start:239365, end:239386) B=3534247 nt (start:615906, end:615927) CALCULATED DISTANCE APART: -2917593 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2490, end:2511) A=258385 nt (start:1026, end:1005) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATTTGGGAGAAACTTATTATT - TTCTAAAGGTATACGGTCTAG) on contig 5 (3689108 nt) Astart:1169877 Aend:1169898 Bstart:1185012 Bend:1184991 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig. Pair (TGACTTCTTTCTGTGGTTTAT - CGAATTCTCGATTAACCATGA) on contig 5 (3689108 nt) Astart:1169387 Aend:1169408 Bstart:1184522 Bend:1184501 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459689, end:459668) A=1345436 nt (start:25971, end:25950) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#65 -> -1239086 <- tig#33, A=286124 nt (start:256565, end:256586) B=1290487 nt (start:1229527, end:1229506) CALCULATED DISTANCE APART: -1239086 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#111 -> -65350 <- tig#17, B=72605 nt (start:57574, end:57595) A=1959065 nt (start:70319, end:70298) CALCULATED DISTANCE APART: -65350 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459044, end:459023) A=1345436 nt (start:26616, end:26595) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#14 -> -765455 <- tig#43, B=2271162 nt (start:2082944, end:2082965) A=1235946 nt (start:597237, end:597216) CALCULATED DISTANCE APART: -765455 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.328 -> -54701 <- tig#102, B=1508 nt (start:1416, end:1395) A=83426 nt (start:73285, end:73264) CALCULATED DISTANCE APART: -54701 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#33 -> -492044 <- tig#32, A=1290487 nt (start:1235657, end:1235678) B=972151 nt (start:457214, end:457193) CALCULATED DISTANCE APART: -492044 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.20 -> -2413469 <- tig#37, B=2328057 nt (start:2055435, end:2055414) A=853709 nt (start:378034, end:378013) CALCULATED DISTANCE APART: -2413469 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12156, end:12135) A=91302 nt (start:12037, end:12016) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#5 -> -2510619 <- tig#43, A=3689108 nt (start:1493229, end:1493250) B=1235946 nt (start:334740, end:334719) CALCULATED DISTANCE APART: -2510619 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3583 <- tig#26, B=1171658 nt (start:1171123, end:1171144) A=1332708 nt (start:23048, end:23027) CALCULATED DISTANCE APART: -3583 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -4201 <- tig#r.96, A=262460 nt (start:244411, end:244432) B=91302 nt (start:85150, end:85171) CALCULATED DISTANCE APART: -4201 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -214291 <- tig#6, A=354284 nt (start:133111, end:133132) B=6870868 nt (start:13118, end:13097) CALCULATED DISTANCE APART: -214291 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459239, end:459218) A=1345436 nt (start:26421, end:26400) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig. Pair (TATCACATGATCTCATCGTTG - ATATTAGCACCTTTCCATCTG) on contig 1 (4853111 nt) Astart:346570 Aend:346591 Bstart:391847 Bend:391826 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig. Pair (GGCTAAACAAAGTAACAAACT - GTGACCTGAACATTGCAACAA) on contig 60 (232804 nt) Astart:31257 Aend:31278 Bstart:57535 Bend:57514 CALCULATED DISTANCE APART: 26278 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2650, end:2671) A=258385 nt (start:1186, end:1165) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CTTGTGGTTTATAACCCGAGA - TATTCTTATACTCAGCTAGTC) on contig 15 (3712591 nt) Astart:1718828 Aend:1718849 Bstart:1729190 Bend:1729211 Pairs unsatisfied in distance within a contig. Pair (CACCCCTAACATCTTTCTCAT - TCATAATGGGAAATTGGGAAT) on contig 15 (3712591 nt) Astart:3352312 Aend:3352333 Bstart:3377298 Bend:3377277 CALCULATED DISTANCE APART: 24986 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728663, end:728684) A=1096 nt (start:748, end:727) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -1335763 <- tig#4, B=3747885 nt (start:2857437, end:2857458) A=3837743 nt (start:465315, end:465294) CALCULATED DISTANCE APART: -1335763 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#112 -> -20255 <- tig#r.126, A=54810 nt (start:45408, end:45429) B=40796 nt (start:9943, end:9964) CALCULATED DISTANCE APART: -20255 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATCAAAAGGAACACAACATTT - AAAATTTATTTATTTCCTCAT) on contig 5 (3689108 nt) Astart:1169577 Aend:1169598 Bstart:1184712 Bend:1184691 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in pairing logic within a contig. Pair (AACATGAGAAATGCCCCAAAC - GTTAATATATGCCGTGAAGTT) on contig 19 (3531543 nt) Astart:3058993 Aend:3058972 Bstart:3049727 Bend:3049706 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730517, end:730538) B=3531543 nt (start:3200091, end:3200070) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730752, end:730773) B=3531543 nt (start:3200326, end:3200305) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:458999, end:458978) A=1345436 nt (start:26661, end:26640) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig. Pair (TAAAGGTTTTTCCTTTTCTCT - AGTTGTATGCCTTGGTCCGAG) on contig 30 (1050452 nt) Astart:650439 Aend:650460 Bstart:666205 Bend:666184 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in pairing logic within a contig. Pair (ACACACAAACCCAAACTACAG - GAATCCAACAAAAATCATCGA) on contig 19 (3531543 nt) Astart:3060301 Aend:3060280 Bstart:3048422 Bend:3048401 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#95 -> -17880 <- tig#54, B=92653 nt (start:92105, end:92126) A=625914 nt (start:37332, end:37311) CALCULATED DISTANCE APART: -17880 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#38 -> -1215223 <- tig#78, B=1143067 nt (start:38510, end:38531) A=184063 nt (start:130666, end:130645) CALCULATED DISTANCE APART: -1215223 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -418494 <- tig#46, A=736718 nt (start:457987, end:458008) B=577887 nt (start:159763, end:159742) CALCULATED DISTANCE APART: -418494 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#3 -> -3661467 <- tig#r.56, A=3889482 nt (start:401867, end:401888) B=262460 nt (start:68608, end:68629) CALCULATED DISTANCE APART: -3661467 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.34 -> -1666421 <- tig#93, B=1705564 nt (start:1679308, end:1679287) A=152036 nt (start:7113, end:7092) CALCULATED DISTANCE APART: -1666421 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#54 -> -327960 <- tig#r.53, A=625914 nt (start:324117, end:324138) B=354284 nt (start:308121, end:308142) CALCULATED DISTANCE APART: -327960 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:134873, end:134894) B=15068 nt (start:2803, end:2824) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#77 -> -224069 <- tig#9, B=160344 nt (start:87933, end:87954) A=3747885 nt (start:171658, end:171637) CALCULATED DISTANCE APART: -224069 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12886, end:12865) A=91302 nt (start:11307, end:11286) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282087, end:282108) B=2196 nt (start:268, end:247) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459854, end:459833) A=1345436 nt (start:25806, end:25785) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTTGGAGAGACTAGATTGCTC - GCACTTGTCTTGTGCCATACA) on contig 6 (6870868 nt) Astart:4411874 Aend:4411895 Bstart:4445828 Bend:4445807 CALCULATED DISTANCE APART: 33954 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#29 -> -25385 <- tig#51, B=1463708 nt (start:1422725, end:1422746) A=875428 nt (start:4402, end:4381) CALCULATED DISTANCE APART: -25385 < -2000 Pairs unsatisfied in distance within a contig. Pair (GGTTTCTCTAGTGGTAGTTCT - AAGATTAAAGTCATATTGTAC) on contig 1 (4853111 nt) Astart:346365 Aend:346386 Bstart:391642 Bend:391621 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.51 -> -1848888 <- tig#2, B=875428 nt (start:106995, end:106974) A=5014909 nt (start:1761893, end:1761872) CALCULATED DISTANCE APART: -1848888 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16330, end:16309) A=1227811 nt (start:7485, end:7464) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#54 -> -868465 <- tig#30, A=625914 nt (start:323562, end:323583) B=1050452 nt (start:586113, end:586092) CALCULATED DISTANCE APART: -868465 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCATATGTCACCAAGCAAACC - AGTCGAGTGAGCTCAAAAGTT) on contig 27 (1227811 nt) Astart:434440 Aend:434461 Bstart:450693 Bend:450672 CALCULATED DISTANCE APART: 16253 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#39 -> -522825 <- tig#r.32, A=736718 nt (start:483783, end:483804) B=972151 nt (start:682261, end:682282) CALCULATED DISTANCE APART: -522825 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10528, end:10507) A=2766197 nt (start:2151035, end:2151014) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTCTTCGAAATTATAGAATTT - TATTTCATGAAATAGCTCGGG) on contig 19 (3531543 nt) Astart:3058338 Aend:3058317 Bstart:3050382 Bend:3050361 Pairs unsatisfied in distance within a contig. Pair (TCTGTAGGCGATAGATGATGA - CCTAGCATGAGAAACACAAAT) on contig 37 (853709 nt) Astart:538582 Aend:538603 Bstart:551254 Bend:551233 CALCULATED DISTANCE APART: 12672 Pairs unsatisfied in distance within a contig. Pair (TGTAACTAGGAATTATTGCAA - ATGTTTGTGGATGTCCCAACC) on contig 10 (3047199 nt) Astart:790084 Aend:790063 Bstart:776171 Bend:776192 CALCULATED DISTANCE APART: 13913 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.42 -> -1433157 <- tig#20, B=659641 nt (start:2238, end:2217) A=2328057 nt (start:1450919, end:1450898) CALCULATED DISTANCE APART: -1433157 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#26 -> -1319331 <- tig#1, B=1332708 nt (start:576515, end:576536) A=4853111 nt (start:583138, end:583117) CALCULATED DISTANCE APART: -1319331 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -6170543 <- tig#6, B=5014909 nt (start:649177, end:649156) A=6870868 nt (start:5541366, end:5541345) CALCULATED DISTANCE APART: -6170543 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#9 -> -3369808 <- tig#22, A=3747885 nt (start:358203, end:358224) B=1636463 nt (start:126, end:105) CALCULATED DISTANCE APART: -3369808 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -621133 <- tig#r.66, A=2766197 nt (start:2129263, end:2129284) B=201913 nt (start:197714, end:197735) CALCULATED DISTANCE APART: -621133 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TGTTAATCTACATATTACTGG - GTTGCCCCAGTACCCAGAGAT) on contig 14 (2271162 nt) Astart:1853289 Aend:1853268 Bstart:2002529 Bend:2002508 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.101 -> -46827 <- tig#107, B=84691 nt (start:23934, end:23913) A=68734 nt (start:42893, end:42872) CALCULATED DISTANCE APART: -46827 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#305 -> -2202335 <- tig#r.19, A=1638 nt (start:27, end:48) B=3531543 nt (start:1310819, end:1310840) CALCULATED DISTANCE APART: -2202335 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16890, end:16869) A=1227811 nt (start:6925, end:6904) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#423 -> -926237 <- tig#34, A=1276 nt (start:24, end:45) B=1705564 nt (start:944985, end:944964) CALCULATED DISTANCE APART: -926237 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.38 -> -1310007 <- tig#33, B=1143067 nt (start:1039089, end:1039068) A=1290487 nt (start:290918, end:290897) CALCULATED DISTANCE APART: -1310007 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282247, end:282268) B=2196 nt (start:428, end:407) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig. Pair (ACGAAGATAAGATGCATACAG - TGTACAATGGATAATCACTAT) on contig 1 (4853111 nt) Astart:345851 Aend:345872 Bstart:391117 Bend:391096 CALCULATED DISTANCE APART: 45266 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282052, end:282073) B=2196 nt (start:233, end:212) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.58 -> -1866109 <- tig#19, B=374416 nt (start:14266, end:14245) A=3531543 nt (start:1871843, end:1871822) CALCULATED DISTANCE APART: -1866109 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136108, end:136129) B=15068 nt (start:1568, end:1589) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -1168778 <- tig#384, A=5070776 nt (start:3882535, end:3882556) B=1359 nt (start:537, end:516) CALCULATED DISTANCE APART: -1168778 < -2000 Pairs unsatisfied in distance within a contig. Pair (CAAACTTCCTTGGCCTAAACG - TTTGAGGCAATAACAGGTCTG) on contig 76 (322881 nt) Astart:41954 Aend:41975 Bstart:41958 Bend:41937 CALCULATED DISTANCE APART: 4 Pairs unsatisfied in pairing logic within a contig. Pair (CTTCTGATCGTCATCCCCAAA - GTCGTGATTGATGGCGGAGCC) on contig 8 (5070776 nt) Astart:792509 Aend:792530 Bstart:760688 Bend:760709 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#42 -> -1103003 <- tig#r.43, A=659641 nt (start:546718, end:546739) B=1235946 nt (start:225866, end:225887) CALCULATED DISTANCE APART: -1103003 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGAAATTAGTTAGGAACATAC - GTTGGCCTACTAAAGCAAAGT) on contig 41 (667251 nt) Astart:88233 Aend:88212 Bstart:75553 Bend:75574 CALCULATED DISTANCE APART: 12680 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2100, end:2121) A=258385 nt (start:636, end:615) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGTGATATAATTGCTATCACA - AAATGAATCAACGATGATTTT) on contig 15 (3712591 nt) Astart:1719263 Aend:1719284 Bstart:1728755 Bend:1728776 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2261002, end:2261023) B=356404 nt (start:342222, end:342243) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2405, end:2426) A=258385 nt (start:941, end:920) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig. Pair (AACTTCTATGTTTAAAGGCTA - CTCCAAGTCTCGAGAGAACGT) on contig 41 (667251 nt) Astart:88043 Aend:88022 Bstart:75363 Bend:75384 CALCULATED DISTANCE APART: 12680 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#39 -> -357382 <- tig#r.48, A=736718 nt (start:457846, end:457867) B=487359 nt (start:388849, end:388870) CALCULATED DISTANCE APART: -357382 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.101 -> -46850 <- tig#107, B=84691 nt (start:24149, end:24128) A=68734 nt (start:42701, end:42680) CALCULATED DISTANCE APART: -46850 < -2000 Pairs unsatisfied in distance within a contig. Pair (CCGTTTCTTGATTCTTCAGGT - ATAAAATATATACCATGTGAA) on contig 2 (5014909 nt) Astart:1269116 Aend:1269137 Bstart:1283778 Bend:1283757 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -322558 <- tig#r.572, A=2650694 nt (start:2308880, end:2308901) B=1031 nt (start:287, end:308) CALCULATED DISTANCE APART: -322558 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGTTATCGTCTTCCCCATTTT - TGATTTGAATCTTCCTCTTTT) on contig 5 (3689108 nt) Astart:1169602 Aend:1169623 Bstart:1184737 Bend:1184716 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3583 <- tig#26, B=1171658 nt (start:1171043, end:1171064) A=1332708 nt (start:22968, end:22947) CALCULATED DISTANCE APART: -3583 < -2000 Pairs unsatisfied in distance within a contig. Pair (GTTTATGTGTTTTGAGTATAG - ATTCCAAGCCGGGATGAGTTG) on contig 37 (853709 nt) Astart:838919 Aend:838898 Bstart:823414 Bend:823435 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4186094, end:4186073) A=3712591 nt (start:467, end:446) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATTTTCGCCTCGTAATATAGC - ACGAGAACGCTGAGGTGACCA) on contig 118 (66247 nt) Astart:2131 Aend:2152 Bstart:7065 Bend:7044 CALCULATED DISTANCE APART: 4934 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#103 -> -188044 <- tig#521, A=211876 nt (start:4824, end:4845) B=1100 nt (start:992, end:971) CALCULATED DISTANCE APART: -188044 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#119 -> -7707 <- tig#r.49, A=46878 nt (start:31765, end:31786) B=399963 nt (start:387369, end:387390) CALCULATED DISTANCE APART: -7707 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTGTCCTAATTCAGACAGAGA - GCAAGAAATTTCATTTCTGCT) on contig 19 (3531543 nt) Astart:3058073 Aend:3058052 Bstart:3050647 Bend:3050626 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#57 -> -2800746 <- tig#3, B=258385 nt (start:190692, end:190713) A=3889482 nt (start:2753053, end:2753032) CALCULATED DISTANCE APART: -2800746 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.1 -> -4590180 <- tig#16, B=4853111 nt (start:3208482, end:3208461) A=2098954 nt (start:1401698, end:1401677) CALCULATED DISTANCE APART: -4590180 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#34 -> -1107958 <- tig#79, A=1705564 nt (start:661541, end:661562) B=136600 nt (start:83935, end:83914) CALCULATED DISTANCE APART: -1107958 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#9 -> -2729018 <- tig#69, A=3747885 nt (start:1134211, end:1134232) B=186132 nt (start:135344, end:135323) CALCULATED DISTANCE APART: -2729018 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#34 -> -6336 <- tig#129, B=1705564 nt (start:1679280, end:1679301) A=39603 nt (start:52, end:31) CALCULATED DISTANCE APART: -6336 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TGAACAGAATGGCCACAGGAC - GACTATTCACATATAATTTAT) on contig 19 (3531543 nt) Astart:3058968 Aend:3058947 Bstart:3049752 Bend:3049731 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460439, end:460418) A=1345436 nt (start:25221, end:25200) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:1845, end:1866) A=258385 nt (start:381, end:360) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#48 -> -156052 <- tig#51, B=487359 nt (start:406291, end:406312) A=875428 nt (start:94984, end:94963) CALCULATED DISTANCE APART: -156052 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.6 -> -5416206 <- tig#35, B=6870868 nt (start:4672200, end:4672179) A=1135475 nt (start:764006, end:763985) CALCULATED DISTANCE APART: -5416206 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:729807, end:729828) B=3531543 nt (start:3199381, end:3199360) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig. Pair (GAAGTTGGTTTTTAGTTTGTA - TGAAAGCAAACAATGTGAGTC) on contig 6 (6870868 nt) Astart:1139149 Aend:1139128 Bstart:1130666 Bend:1130687 CALCULATED DISTANCE APART: 8483 Pairs unsatisfied in pairing logic within a contig. Pair (AGAAAGCGACTTTTGTTTATT - CCTCGACGGAAACAAAATCTC) on contig 7 (3534247 nt) Astart:2256472 Aend:2256451 Bstart:2238312 Bend:2238291 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3583 <- tig#26, B=1171658 nt (start:1171508, end:1171529) A=1332708 nt (start:23433, end:23412) CALCULATED DISTANCE APART: -3583 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#136 -> -18358 <- tig#r.174, A=49085 nt (start:17433, end:17454) B=11297 nt (start:4591, end:4612) CALCULATED DISTANCE APART: -18358 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.38 -> -1426764 <- tig#29, B=1143067 nt (start:1039684, end:1039663) A=1463708 nt (start:407080, end:407059) CALCULATED DISTANCE APART: -1426764 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#27 -> -2275220 <- tig#14, A=1227811 nt (start:935865, end:935886) B=2271162 nt (start:2003274, end:2003253) CALCULATED DISTANCE APART: -2275220 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGAAACTTAGGTGCATAATAT - AAGAATTATTGCCTAGGCCAA) on contig 37 (853709 nt) Astart:838704 Aend:838683 Bstart:823199 Bend:823220 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in distance within a contig. Pair (GCGGTAAGCACTACTAATTTT - GATCTGATGTATACCTAAACT) on contig 2 (5014909 nt) Astart:1269746 Aend:1269767 Bstart:1284408 Bend:1284387 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig. Pair (GGTTTACTTCTTCTTCTTCGT - TGCAGGATTTTATAGGAGATT) on contig 30 (1050452 nt) Astart:650744 Aend:650765 Bstart:666510 Bend:666489 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#46 -> -354208 <- tig#186, B=577887 nt (start:211978, end:211999) A=8794 nt (start:8299, end:8278) CALCULATED DISTANCE APART: -354208 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33969, end:33948) A=855454 nt (start:18480, end:18459) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282977, end:282998) B=2196 nt (start:1158, end:1137) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.25 -> -1385598 <- tig#38, B=1290536 nt (start:1101560, end:1101539) A=1143067 nt (start:304038, end:304017) CALCULATED DISTANCE APART: -1385598 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#48 -> -3151847 <- tig#12, B=487359 nt (start:40666, end:40687) A=2766197 nt (start:2725154, end:2725133) CALCULATED DISTANCE APART: -3151847 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#54 -> -868463 <- tig#30, A=625914 nt (start:324597, end:324618) B=1050452 nt (start:587146, end:587125) CALCULATED DISTANCE APART: -868463 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.46 -> -14847 <- tig#3, B=577887 nt (start:15665, end:15644) A=3889482 nt (start:19182, end:19161) CALCULATED DISTANCE APART: -14847 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.1 -> -4590180 <- tig#16, B=4853111 nt (start:3208492, end:3208471) A=2098954 nt (start:1401688, end:1401667) CALCULATED DISTANCE APART: -4590180 < -2000 Pairs unsatisfied in distance within a contig. Pair (GCATGGATTCACTGTTAAGTT - ACACTCAAAGCAACTGGAGCA) on contig 6 (6870868 nt) Astart:1138359 Aend:1138338 Bstart:1129932 Bend:1129953 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16425, end:16404) A=1227811 nt (start:7390, end:7369) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135728, end:135749) B=15068 nt (start:1948, end:1969) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136513, end:136534) B=15068 nt (start:1163, end:1184) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#36 -> -60275 <- tig#86, A=855454 nt (start:790290, end:790311) B=280231 nt (start:15111, end:15090) CALCULATED DISTANCE APART: -60275 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16660, end:16639) A=1227811 nt (start:7155, end:7134) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#43 -> -1695228 <- tig#r.7, A=1235946 nt (start:1223086, end:1223107) B=3534247 nt (start:1831879, end:1831900) CALCULATED DISTANCE APART: -1695228 < -2000 Pairs unsatisfied in distance within a contig. Pair (GGATAAACTTGAGAAGGTTAA - ATCTAGCGGTTTCCAATAATT) on contig 2 (5014909 nt) Astart:1270146 Aend:1270167 Bstart:1284808 Bend:1284787 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in pairing logic within a contig. Pair (GTTGATGAGAAGCCTTTTTGG - TGTGAGGACTTACACTTGGAC) on contig 33 (1290487 nt) Astart:109122 Aend:109143 Bstart:244479 Bend:244500 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136338, end:136359) B=15068 nt (start:1338, end:1359) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.77 -> -3517647 <- tig#7, B=160344 nt (start:13515, end:13494) A=3534247 nt (start:3524132, end:3524111) CALCULATED DISTANCE APART: -3517647 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#15 -> -8116131 <- tig#6, B=3712591 nt (start:343144, end:343165) A=6870868 nt (start:4766684, end:4766663) CALCULATED DISTANCE APART: -8116131 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#103 -> -216461 <- tig#48, A=211876 nt (start:14539, end:14560) B=487359 nt (start:39124, end:39103) CALCULATED DISTANCE APART: -216461 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTAAAGTCAACCGCCAAAATC - AGCTTATTCCAAGGAAATAAG) on contig 19 (3531543 nt) Astart:3059108 Aend:3059087 Bstart:3049612 Bend:3049591 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16500, end:16479) A=1227811 nt (start:7315, end:7294) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#19 -> -4948844 <- tig#11, B=3531543 nt (start:13184, end:13205) A=4628067 nt (start:1450485, end:1450464) CALCULATED DISTANCE APART: -4948844 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTTCAGGTTTTAGAATGCAAA - TCTTATTATATAATGTTTAGT) on contig 37 (853709 nt) Astart:538397 Aend:538418 Bstart:551066 Bend:551045 CALCULATED DISTANCE APART: 12669 Pairs unsatisfied in distance within a contig. Pair (GAGTCCTTGGAGAGACTAGAT - TGTCTTGTGCCATACAAGAGA) on contig 6 (6870868 nt) Astart:4411869 Aend:4411890 Bstart:4445823 Bend:4445802 CALCULATED DISTANCE APART: 33954 Pairs unsatisfied in distance within a contig. Pair (CAAACCATTGTATGGCCTACG - ATTGCGAGAGGTGTGAGTCGA) on contig 27 (1227811 nt) Astart:434455 Aend:434476 Bstart:450708 Bend:450687 CALCULATED DISTANCE APART: 16253 Pairs unsatisfied in distance within a contig. Pair (TTGTTGGCTAGCTCTTGATAA - TTTAAATGAACGGAATAGTAC) on contig 5 (3689108 nt) Astart:1171712 Aend:1171733 Bstart:1186848 Bend:1186827 CALCULATED DISTANCE APART: 15136 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33659, end:33638) A=855454 nt (start:18790, end:18769) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.38 -> -1426764 <- tig#29, B=1143067 nt (start:1039739, end:1039718) A=1463708 nt (start:407025, end:407004) CALCULATED DISTANCE APART: -1426764 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GGGCGGGTTAATATGCAGGAG - ACTAGATTATAGTATTAATTA) on contig 14 (2271162 nt) Astart:658336 Aend:658315 Bstart:495575 Bend:495554 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#58 -> -765518 <- tig#r.41, A=374416 nt (start:44354, end:44375) B=667251 nt (start:211795, end:211816) CALCULATED DISTANCE APART: -765518 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGGCGATCCGATTTCTGAATG - TTCATTTATCACCATACTTCA) on contig 5 (3689108 nt) Astart:1171807 Aend:1171828 Bstart:1186943 Bend:1186922 CALCULATED DISTANCE APART: 15136 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.403 -> -2330792 <- tig#13, B=1321 nt (start:350, end:329) A=2650694 nt (start:2350442, end:2350421) CALCULATED DISTANCE APART: -2330792 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#75 -> -1731898 <- tig#19, A=373953 nt (start:296406, end:296427) B=3531543 nt (start:1674351, end:1674330) CALCULATED DISTANCE APART: -1731898 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16350, end:16329) A=1227811 nt (start:7465, end:7444) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -40662 <- tig#443, A=736718 nt (start:676906, end:676927) B=1213 nt (start:850, end:829) CALCULATED DISTANCE APART: -40662 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16260, end:16239) A=1227811 nt (start:7555, end:7534) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.29 -> -1609393 <- tig#35, B=1463708 nt (start:953674, end:953653) A=1135475 nt (start:675719, end:675698) CALCULATED DISTANCE APART: -1609393 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#14 -> -765455 <- tig#43, B=2271162 nt (start:2082909, end:2082930) A=1235946 nt (start:597202, end:597181) CALCULATED DISTANCE APART: -765455 < -2000 Pairs unsatisfied in distance within a contig. Pair (ACCATTAATTGCTTGCTTGAT - GGTCTATAAAACCACACGAGA) on contig 1 (4853111 nt) Astart:346890 Aend:346911 Bstart:392167 Bend:392146 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -1335762 <- tig#4, B=3747885 nt (start:2857362, end:2857383) A=3837743 nt (start:465239, end:465218) CALCULATED DISTANCE APART: -1335762 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.328 -> -54701 <- tig#102, B=1508 nt (start:1406, end:1385) A=83426 nt (start:73295, end:73274) CALCULATED DISTANCE APART: -54701 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#19 -> -2734537 <- tig#r.2, A=3531543 nt (start:1923338, end:1923359) B=5014909 nt (start:3868577, end:3868598) CALCULATED DISTANCE APART: -2734537 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCCGTTACTTCTTAGAAATAT - AGACAAGACGGGTTTCTCTTC) on contig 30 (1050452 nt) Astart:650089 Aend:650110 Bstart:665855 Bend:665834 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#64 -> -210549 <- tig#109, B=211265 nt (start:897, end:918) A=66564 nt (start:20181, end:20160) CALCULATED DISTANCE APART: -210549 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CGATCTCTTTCATTGTGTTGC - ACCCATGAATACACCACTCTC) on contig 4 (3837743 nt) Astart:2357846 Aend:2357867 Bstart:2360216 Bend:2360237 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.86 -> -821321 <- tig#33, B=280231 nt (start:15141, end:15120) A=1290487 nt (start:826180, end:826159) CALCULATED DISTANCE APART: -821321 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#57 -> -2800746 <- tig#3, B=258385 nt (start:190687, end:190708) A=3889482 nt (start:2753048, end:2753027) CALCULATED DISTANCE APART: -2800746 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#9 -> -3401550 <- tig#r.107, A=3747885 nt (start:358288, end:358309) B=68734 nt (start:36781, end:36802) CALCULATED DISTANCE APART: -3401550 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2605, end:2626) A=258385 nt (start:1141, end:1120) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#7 -> -3853079 <- tig#36, A=3534247 nt (start:146094, end:146115) B=855454 nt (start:484926, end:484905) CALCULATED DISTANCE APART: -3853079 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.53 -> -324432 <- tig#35, B=354284 nt (start:292452, end:292431) A=1135475 nt (start:51980, end:51959) CALCULATED DISTANCE APART: -324432 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#47 -> -293192 <- tig#6, A=471458 nt (start:171024, end:171045) B=6870868 nt (start:12758, end:12737) CALCULATED DISTANCE APART: -293192 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16415, end:16394) A=1227811 nt (start:7400, end:7379) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#48 -> -3151835 <- tig#12, B=487359 nt (start:39098, end:39119) A=2766197 nt (start:2723574, end:2723553) CALCULATED DISTANCE APART: -3151835 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#79 -> -654168 <- tig#r.2, A=136600 nt (start:36939, end:36960) B=5014909 nt (start:4440402, end:4440423) CALCULATED DISTANCE APART: -654168 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#31 -> -496427 <- tig#41, B=976128 nt (start:946395, end:946416) A=667251 nt (start:486694, end:486673) CALCULATED DISTANCE APART: -496427 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#54 -> -868463 <- tig#30, A=625914 nt (start:324512, end:324533) B=1050452 nt (start:587061, end:587040) CALCULATED DISTANCE APART: -868463 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#77 -> -122338 <- tig#99, B=160344 nt (start:24849, end:24870) A=88102 nt (start:6843, end:6822) CALCULATED DISTANCE APART: -122338 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219301, end:4219280) A=2598 nt (start:2320, end:2299) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GAGTTAGGTCCGGAGGATTCG - AATAAAAATCATATAATTACC) on contig 15 (3712591 nt) Astart:1718198 Aend:1718219 Bstart:1729820 Bend:1729841 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136198, end:136219) B=15068 nt (start:1478, end:1499) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GAACAAATTTCGAGACGTCAG - CAACGATTAGACTTAGACCAA) on contig 14 (2271162 nt) Astart:658486 Aend:658465 Bstart:495425 Bend:495404 Pairs unsatisfied in distance within a contig. Pair (ATCTCAACAACTTTGGAACCC - TTTAATTTATTTTGGAAATTT) on contig 34 (1705564 nt) Astart:680029 Aend:680008 Bstart:665066 Bend:665087 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135538, end:135559) B=15068 nt (start:2138, end:2159) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig. Pair (GGATAAGCTTTCTAGTAATGT - GATTCTCCATCTCATTCACAC) on contig 2 (5014909 nt) Astart:1268911 Aend:1268932 Bstart:1283573 Bend:1283552 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259962, end:2259983) B=356404 nt (start:343262, end:343283) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#305 -> -2202335 <- tig#r.19, A=1638 nt (start:42, end:63) B=3531543 nt (start:1310804, end:1310825) CALCULATED DISTANCE APART: -2202335 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#14 -> -765455 <- tig#43, B=2271162 nt (start:2082949, end:2082970) A=1235946 nt (start:597242, end:597221) CALCULATED DISTANCE APART: -765455 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TAAGTAAATGTTCTTCTGAAT - AAAAATCCTGATTCATTGATA) on contig 15 (3712591 nt) Astart:1717188 Aend:1717209 Bstart:1730830 Bend:1730851 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17295, end:17274) A=1227811 nt (start:6520, end:6499) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460834, end:460813) A=1345436 nt (start:24826, end:24805) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33419, end:33398) A=855454 nt (start:19030, end:19009) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CGGCCTCTTTCCGGCCGTTGT - TTCCTACATGTTCTTAACTTC) on contig 19 (3531543 nt) Astart:3060166 Aend:3060145 Bstart:3048557 Bend:3048536 Pairs unsatisfied in distance within a contig. Pair (AACTTACAACTATGAGCCACT - GCGGCTTCCCCGGTAAGTGAA) on contig 41 (667251 nt) Astart:88088 Aend:88067 Bstart:75408 Bend:75429 CALCULATED DISTANCE APART: 12680 Pairs unsatisfied in pairing logic within a contig. Pair (TAACGAAGATGTTCTTGGCAA - AGACTCCCTCAACACCCACCC) on contig 49 (399963 nt) Astart:43349 Aend:43328 Bstart:44128 Bend:44149 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#129 -> -19487 <- tig#520, A=39603 nt (start:547, end:568) B=1101 nt (start:431, end:410) CALCULATED DISTANCE APART: -19487 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.101 -> -46827 <- tig#107, B=84691 nt (start:23944, end:23923) A=68734 nt (start:42883, end:42862) CALCULATED DISTANCE APART: -46827 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -1335675 <- tig#4, B=3747885 nt (start:2858767, end:2858788) A=3837743 nt (start:466557, end:466536) CALCULATED DISTANCE APART: -1335675 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ACATTCAACTTTTCTGAAAAA - AAAGTAAATCAATGATTCATA) on contig 4 (3837743 nt) Astart:2358376 Aend:2358397 Bstart:2359686 Bend:2359707 Pairs unsatisfied in distance within a contig. Pair (TCCCATTAGACCATAAGGCTT - GAGACAATGAGTACATCATTG) on contig 14 (2271162 nt) Astart:2001198 Aend:2001177 Bstart:1734431 Bend:1734452 CALCULATED DISTANCE APART: 266767 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#43 -> -1009149 <- tig#73, B=1235946 nt (start:225796, end:225817) A=171056 nt (start:18999, end:18978) CALCULATED DISTANCE APART: -1009149 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.32 -> -889372 <- tig#17, B=972151 nt (start:418893, end:418872) A=1959065 nt (start:490479, end:490458) CALCULATED DISTANCE APART: -889372 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#62 -> -438762 <- tig#r.31, A=354710 nt (start:50641, end:50662) B=976128 nt (start:821435, end:821456) CALCULATED DISTANCE APART: -438762 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#148 -> -836231 <- tig#r.36, A=35830 nt (start:33834, end:33855) B=855454 nt (start:1219, end:1240) CALCULATED DISTANCE APART: -836231 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#6 -> -39937 <- tig#91, A=6870868 nt (start:6825391, end:6825412) B=101959 nt (start:14460, end:14439) CALCULATED DISTANCE APART: -39937 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282902, end:282923) B=2196 nt (start:1083, end:1062) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#1 -> -4767289 <- tig#17, A=4853111 nt (start:1551537, end:1551558) B=1959065 nt (start:1485715, end:1485694) CALCULATED DISTANCE APART: -4767289 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#38 -> -2074550 <- tig#25, B=1143067 nt (start:41622, end:41643) A=1290536 nt (start:993105, end:993084) CALCULATED DISTANCE APART: -2074550 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -1263678 <- tig#29, A=736718 nt (start:407354, end:407375) B=1463708 nt (start:954314, end:954293) CALCULATED DISTANCE APART: -1263678 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#103 -> -259849 <- tig#r.48, A=211876 nt (start:14669, end:14690) B=487359 nt (start:404717, end:404738) CALCULATED DISTANCE APART: -259849 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#127 -> -717436 <- tig#r.33, A=80830 nt (start:20206, end:20227) B=1290487 nt (start:613675, end:613696) CALCULATED DISTANCE APART: -717436 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#73 -> -6652852 <- tig#6, A=171056 nt (start:153829, end:153850) B=6870868 nt (start:6655625, end:6655604) CALCULATED DISTANCE APART: -6652852 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.13 -> -1699354 <- tig#8, B=2650694 nt (start:809937, end:809916) A=5070776 nt (start:909417, end:909396) CALCULATED DISTANCE APART: -1699354 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282407, end:282428) B=2196 nt (start:588, end:567) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCCATTGTTGGAGATGCAGTG - AACAAAGAAATAGATAAATAT) on contig 5 (3689108 nt) Astart:1178577 Aend:1178556 Bstart:1163443 Bend:1163464 CALCULATED DISTANCE APART: 15134 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#129 -> -161975 <- tig#r.77, A=39603 nt (start:4372, end:4393) B=160344 nt (start:13600, end:13621) CALCULATED DISTANCE APART: -161975 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GAACTTAATTAGTGCTTAGAG - ATGAGACTTCCCCTCTAGGTT) on contig 19 (3531543 nt) Astart:3058103 Aend:3058082 Bstart:3050617 Bend:3050596 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728048, end:728069) A=1096 nt (start:133, end:112) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGGCGCCACAAAAACACAAGC - AATCTTTATGTTTGGTTTTAA) on contig 15 (3712591 nt) Astart:1716608 Aend:1716629 Bstart:1731410 Bend:1731431 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.459 -> -147882 <- tig#53, B=1183 nt (start:66, end:45) A=354284 nt (start:167816, end:167795) CALCULATED DISTANCE APART: -147882 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4186099, end:4186078) A=3712591 nt (start:462, end:441) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#63 -> -330553 <- tig#78, B=274372 nt (start:54675, end:54696) A=184063 nt (start:130856, end:130835) CALCULATED DISTANCE APART: -330553 < -2000 Pairs unsatisfied in distance within a contig. Pair (GTGTCTTCTAACAAGGAAACA - GTGTTTCCTTGTTAGAAGACA) on contig 167 (25236 nt) Astart:10212 Aend:10191 Bstart:10190 Bend:10211 CALCULATED DISTANCE APART: 22 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#7 -> -3853079 <- tig#36, A=3534247 nt (start:146089, end:146110) B=855454 nt (start:484921, end:484900) CALCULATED DISTANCE APART: -3853079 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATTAGCGCTTAGAACCTTTTT - ATTCCATATCTAGGTAAGAAA) on contig 15 (3712591 nt) Astart:3352367 Aend:3352388 Bstart:3377353 Bend:3377332 CALCULATED DISTANCE APART: 24986 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#34 -> -3900848 <- tig#r.11, A=1705564 nt (start:54527, end:54548) B=4628067 nt (start:2358256, end:2358277) CALCULATED DISTANCE APART: -3900848 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGTCACAAGCGAAGAAACTCA - GATTAAGAACAAAATAAAAAT) on contig 5 (3689108 nt) Astart:1178537 Aend:1178516 Bstart:1163403 Bend:1163424 CALCULATED DISTANCE APART: 15134 Pairs unsatisfied in distance within a contig. Pair (AAGAGATGGGTACGAAAGGTC - GTTGATACATCGAGTTTGGGA) on contig 1 (4853111 nt) Astart:346750 Aend:346771 Bstart:392027 Bend:392006 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in pairing logic within a contig. Pair (TAAACAGTTGTATCCGCCCGT - AAATAAAAAAAGGTTGCTTGC) on contig 14 (2271162 nt) Astart:658421 Aend:658400 Bstart:495490 Bend:495469 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#433 -> -944078 <- tig#r.29, A=1238 nt (start:666, end:687) B=1463708 nt (start:500202, end:500223) CALCULATED DISTANCE APART: -944078 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#77 -> -127681 <- tig#51, A=160344 nt (start:13497, end:13518) B=875428 nt (start:834, end:813) CALCULATED DISTANCE APART: -127681 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGAATCTATTGATTCGGAAAA - GCACTAAACCCTTATAGCTAA) on contig 2 (5014909 nt) Astart:1268556 Aend:1268577 Bstart:1283218 Bend:1283197 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730682, end:730703) B=3531543 nt (start:3200256, end:3200235) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATGAATGTAAATGTATACACT - GTCAATAGATGTATAAAACAG) on contig 37 (853709 nt) Astart:838594 Aend:838573 Bstart:823089 Bend:823110 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#283 -> -3818458 <- tig#2, A=1768 nt (start:578, end:599) B=5014909 nt (start:3837268, end:3837247) CALCULATED DISTANCE APART: -3818458 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#119 -> -7707 <- tig#r.49, A=46878 nt (start:31780, end:31801) B=399963 nt (start:387354, end:387375) CALCULATED DISTANCE APART: -7707 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.1 -> -4590180 <- tig#16, B=4853111 nt (start:3208422, end:3208401) A=2098954 nt (start:1401758, end:1401737) CALCULATED DISTANCE APART: -4590180 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#18 -> -3612340 <- tig#r.4, A=1738864 nt (start:1593032, end:1593053) B=3837743 nt (start:351235, end:351256) CALCULATED DISTANCE APART: -3612340 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATGCATTTGTACTGTTTCTTT - CAGCCATAAACTACTCGTCGA) on contig 2 (5014909 nt) Astart:1269351 Aend:1269372 Bstart:1284013 Bend:1283992 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728693, end:728714) A=1096 nt (start:778, end:757) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219111, end:4219090) A=2598 nt (start:2510, end:2489) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260262, end:2260283) B=356404 nt (start:342962, end:342983) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459924, end:459903) A=1345436 nt (start:25736, end:25715) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#11 -> -3991891 <- tig#25, A=4628067 nt (start:890913, end:890934) B=1290536 nt (start:274737, end:274716) CALCULATED DISTANCE APART: -3991891 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.15 -> -3863647 <- tig#1, B=3712591 nt (start:1966212, end:1966191) A=4853111 nt (start:1917435, end:1917414) CALCULATED DISTANCE APART: -3863647 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#47 -> -583213 <- tig#r.69, A=471458 nt (start:9933, end:9954) B=186132 nt (start:44444, end:44465) CALCULATED DISTANCE APART: -583213 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#265 -> -3126344 <- tig#4, A=1946 nt (start:1881, end:1902) B=3837743 nt (start:3146279, end:3146258) CALCULATED DISTANCE APART: -3126344 < -2000 Pairs unsatisfied in distance within a contig. Pair (GTCTCATTTTGCAAATTCTTA - GGAGGAAGCACAAGAAGAAGC) on contig 30 (1050452 nt) Astart:650654 Aend:650675 Bstart:666420 Bend:666399 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in pairing logic within a contig. Pair (AGCTTTAAACAGTTGTATCCG - AAAAAAGGTTGCTTGCAAGTT) on contig 14 (2271162 nt) Astart:658426 Aend:658405 Bstart:495485 Bend:495464 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -1168778 <- tig#384, A=5070776 nt (start:3882310, end:3882331) B=1359 nt (start:312, end:291) CALCULATED DISTANCE APART: -1168778 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#52 -> -356009 <- tig#3, B=356404 nt (start:32, end:53) A=3889482 nt (start:19637, end:19616) CALCULATED DISTANCE APART: -356009 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460284, end:460263) A=1345436 nt (start:25376, end:25355) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728703, end:728724) A=1096 nt (start:788, end:767) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCTTTCTGTGGTTTATAACTT - ATGGACGAATTCTCGATTAAC) on contig 5 (3689108 nt) Astart:1169392 Aend:1169413 Bstart:1184527 Bend:1184506 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#26 -> -90650 <- tig#95, B=1332708 nt (start:1310443, end:1310464) A=92653 nt (start:88385, end:88364) CALCULATED DISTANCE APART: -90650 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135778, end:135799) B=15068 nt (start:1898, end:1919) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282012, end:282033) B=2196 nt (start:193, end:172) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135238, end:135259) B=15068 nt (start:2438, end:2459) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2335, end:2356) A=258385 nt (start:871, end:850) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2365, end:2386) A=258385 nt (start:901, end:880) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GAATTCAGTAGTCGAGTGGGT - TATATGCTATTCATAGGTAAT) on contig 15 (3712591 nt) Astart:1719093 Aend:1719114 Bstart:1728925 Bend:1728946 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#34 -> -1056103 <- tig#r.65, A=1705564 nt (start:662551, end:662572) B=286124 nt (start:253034, end:253055) CALCULATED DISTANCE APART: -1056103 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#25 -> -666259 <- tig#2, B=1290536 nt (start:852722, end:852743) A=5014909 nt (start:248445, end:248424) CALCULATED DISTANCE APART: -666259 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#48 -> -91507 <- tig#r.67, A=487359 nt (start:470650, end:470671) B=197815 nt (start:103017, end:103038) CALCULATED DISTANCE APART: -91507 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CCGAGTAGATTTTCGGTATGT - AACATTTCTTACGAATCGTAT) on contig 19 (3531543 nt) Astart:3058163 Aend:3058142 Bstart:3050557 Bend:3050536 Pairs unsatisfied in distance within a contig. Pair (GGTGTGAAGGATGAGGCAGAG - TTTTCAGAAGAAAGGATTCAA) on contig 2 (5014909 nt) Astart:1269591 Aend:1269612 Bstart:1284253 Bend:1284232 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#52 -> -1912480 <- tig#r.15, A=356404 nt (start:82853, end:82874) B=3712591 nt (start:2053662, end:2053683) CALCULATED DISTANCE APART: -1912480 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#120 -> -1341554 <- tig#29, B=44710 nt (start:43877, end:43898) A=1463708 nt (start:1360721, end:1360700) CALCULATED DISTANCE APART: -1341554 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#119 -> -7707 <- tig#r.49, A=46878 nt (start:31975, end:31996) B=399963 nt (start:387159, end:387180) CALCULATED DISTANCE APART: -7707 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282597, end:282618) B=2196 nt (start:778, end:757) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig. Pair (TAAAAGTGATCAAGGAAAATC - AACTATCTGCCAAAAAGAATT) on contig 34 (1705564 nt) Astart:679894 Aend:679873 Bstart:664931 Bend:664952 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig. Pair (ATCAGCTTTATGTCCAGAAAA - AAAATCGGATCTATGAAACGG) on contig 34 (1705564 nt) Astart:679749 Aend:679728 Bstart:664786 Bend:664807 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#48 -> -3151835 <- tig#12, B=487359 nt (start:39103, end:39124) A=2766197 nt (start:2723579, end:2723558) CALCULATED DISTANCE APART: -3151835 < -2000 Pairs unsatisfied in distance within a contig. Pair (GTTAAACTATTACGAGGTTTT - ACTAGAACATGAAAGGATTCT) on contig 30 (1050452 nt) Astart:649779 Aend:649800 Bstart:665545 Bend:665524 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136503, end:136524) B=15068 nt (start:1173, end:1194) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:134758, end:134779) B=15068 nt (start:2918, end:2939) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#54 -> -78399 <- tig#68, B=625914 nt (start:572486, end:572507) A=189499 nt (start:44971, end:44950) CALCULATED DISTANCE APART: -78399 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#29 -> -579824 <- tig#28, A=1463708 nt (start:1144445, end:1144466) B=1171658 nt (start:280561, end:280540) CALCULATED DISTANCE APART: -579824 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#26 -> -90650 <- tig#95, B=1332708 nt (start:1310608, end:1310629) A=92653 nt (start:88550, end:88529) CALCULATED DISTANCE APART: -90650 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#120 -> -1341554 <- tig#29, B=44710 nt (start:44277, end:44298) A=1463708 nt (start:1361121, end:1361100) CALCULATED DISTANCE APART: -1341554 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#51 -> -859260 <- tig#118, B=875428 nt (start:1402, end:1423) A=66247 nt (start:5234, end:5213) CALCULATED DISTANCE APART: -859260 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCTTTTAGGTTGGGGAAGCCT - CCACAGGTATTTCATTCCTAC) on contig 60 (232804 nt) Astart:31352 Aend:31373 Bstart:57630 Bend:57609 CALCULATED DISTANCE APART: 26278 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16740, end:16719) A=1227811 nt (start:7075, end:7054) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136523, end:136544) B=15068 nt (start:1153, end:1174) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTGTCGACCAGGAGTTGAAAT - CCTGGTCGACAAATCCTCGAC) on contig 95 (92653 nt) Astart:92570 Aend:92549 Bstart:92558 Bend:92579 CALCULATED DISTANCE APART: 12 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728143, end:728164) A=1096 nt (start:228, end:207) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#127 -> -717436 <- tig#r.33, A=80830 nt (start:20226, end:20247) B=1290487 nt (start:613655, end:613676) CALCULATED DISTANCE APART: -717436 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -1687794 <- tig#34, A=354284 nt (start:325784, end:325805) B=1705564 nt (start:1679294, end:1679273) CALCULATED DISTANCE APART: -1687794 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -25935 <- tig#114, A=354284 nt (start:325784, end:325805) B=54818 nt (start:17435, end:17414) CALCULATED DISTANCE APART: -25935 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#33 -> -492044 <- tig#32, A=1290487 nt (start:1235677, end:1235698) B=972151 nt (start:457234, end:457213) CALCULATED DISTANCE APART: -492044 < -2000 Pairs unsatisfied in distance within a contig. Pair (TATTTGATGAATAGAGTTTGA - AAACATCTGAATGAAAAGCAA) on contig 6 (6870868 nt) Astart:1137864 Aend:1137843 Bstart:1129437 Bend:1129458 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#51 -> -598185 <- tig#54, A=875428 nt (start:751170, end:751191) B=625914 nt (start:493927, end:493906) CALCULATED DISTANCE APART: -598185 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -14650 <- tig#57, B=27696 nt (start:14269, end:14290) A=258385 nt (start:21223, end:21202) CALCULATED DISTANCE APART: -14650 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10608, end:10587) A=2766197 nt (start:2150955, end:2150934) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#19 -> -1649636 <- tig#31, A=3531543 nt (start:1879037, end:1879058) B=976128 nt (start:17130, end:17109) CALCULATED DISTANCE APART: -1649636 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGCGTATAGTACCTGGAGAAA - ATAACCATCTCTGTGGGAGGA) on contig 7 (3534247 nt) Astart:2256687 Aend:2256666 Bstart:2238091 Bend:2238070 Pairs unsatisfied in distance within a contig. Pair (ATTCACTACTCAGACGTCATT - AGTACAGCTCTAATTCCCAAT) on contig 123 (42452 nt) Astart:14656 Aend:14635 Bstart:1524 Bend:1545 CALCULATED DISTANCE APART: 13132 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#34 -> -2271848 <- tig#31, A=1705564 nt (start:173771, end:173792) B=976128 nt (start:760055, end:760034) CALCULATED DISTANCE APART: -2271848 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TAATACACATGACATCAAGTC - GTTTTTTTAATAAAGATGCAG) on contig 261 (1974 nt) Astart:67 Aend:46 Bstart:1411 Bend:1432 Pairs unsatisfied in pairing logic within a contig. Pair (GTATCTAGTGAGATTTTCGTA - AAGTTGTGAGTATGCGGAGAT) on contig 15 (3712591 nt) Astart:1717478 Aend:1717499 Bstart:1730540 Bend:1730561 Pairs unsatisfied in distance within a contig. Pair (TACATACAGGTGAACAACGGA - TGGAGTTTCATTCATTGCCTG) on contig 14 (2271162 nt) Astart:2001168 Aend:2001147 Bstart:1734401 Bend:1734422 CALCULATED DISTANCE APART: 266767 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#28 -> -913193 <- tig#475, A=1171658 nt (start:238660, end:238681) B=1157 nt (start:195, end:174) CALCULATED DISTANCE APART: -913193 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#7 -> -40376 <- tig#74, B=3534247 nt (start:3500294, end:3500315) A=238371 nt (start:26423, end:26402) CALCULATED DISTANCE APART: -40376 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#6 -> -1309140 <- tig#11, B=6870868 nt (start:6432663, end:6432684) A=4628067 nt (start:890935, end:890914) CALCULATED DISTANCE APART: -1309140 < -2000 Pairs unsatisfied in distance within a contig. Pair (AATGTGGGCTGTAAGTGATAG - ATGAGTCCATTATCATCCAAT) on contig 41 (667251 nt) Astart:88573 Aend:88552 Bstart:75893 Bend:75914 CALCULATED DISTANCE APART: 12680 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -621133 <- tig#r.66, A=2766197 nt (start:2129503, end:2129524) B=201913 nt (start:197474, end:197495) CALCULATED DISTANCE APART: -621133 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2905, end:2926) A=258385 nt (start:1441, end:1420) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728673, end:728694) A=1096 nt (start:758, end:737) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGAATCTGAATGCGATAATGA - AACATGACATTAACACAACCA) on contig 1 (4853111 nt) Astart:346415 Aend:346436 Bstart:391692 Bend:391671 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in pairing logic within a contig. Pair (AAAAACTCAGATTTTTGTTTT - CATGTGAGAAATATGTTTTTG) on contig 15 (3712591 nt) Astart:1718118 Aend:1718139 Bstart:1729900 Bend:1729921 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#131 -> -56242 <- tig#91, B=36503 nt (start:13947, end:13968) A=101959 nt (start:53686, end:53665) CALCULATED DISTANCE APART: -56242 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTTGATAAAATTTGCCAATTA - ATACCAAAGAATCCATGGAAA) on contig 19 (3531543 nt) Astart:3059866 Aend:3059845 Bstart:3048857 Bend:3048836 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.6 -> -8213068 <- tig#34, B=6870868 nt (start:6553774, end:6553753) A=1705564 nt (start:1679294, end:1679273) CALCULATED DISTANCE APART: -8213068 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -4201 <- tig#r.96, A=262460 nt (start:244441, end:244462) B=91302 nt (start:85120, end:85141) CALCULATED DISTANCE APART: -4201 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATGACAGCGGCCTACGTGCAA - TCATGGTTGTTAGCGGATAAA) on contig 19 (3531543 nt) Astart:1348164 Aend:1348143 Bstart:1311019 Bend:1311040 CALCULATED DISTANCE APART: 37145 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#48 -> -123655 <- tig#r.84, A=487359 nt (start:470330, end:470351) B=197079 nt (start:70453, end:70474) CALCULATED DISTANCE APART: -123655 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -1168778 <- tig#384, A=5070776 nt (start:3882470, end:3882491) B=1359 nt (start:472, end:451) CALCULATED DISTANCE APART: -1168778 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#48 -> -585449 <- tig#46, A=487359 nt (start:41943, end:41964) B=577887 nt (start:160033, end:160012) CALCULATED DISTANCE APART: -585449 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAGGATTTGCTCATGACTCAA - CATTCTTCTTCTGAAGTTTTA) on contig 1 (4853111 nt) Astart:346660 Aend:346681 Bstart:391937 Bend:391916 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259712, end:2259733) B=356404 nt (start:343512, end:343533) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#118 -> -33564 <- tig#97, B=66247 nt (start:38052, end:38073) A=91050 nt (start:25369, end:25348) CALCULATED DISTANCE APART: -33564 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#145 -> -53311 <- tig#51, A=21756 nt (start:14293, end:14314) B=875428 nt (start:65848, end:65827) CALCULATED DISTANCE APART: -53311 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#67 -> -163343 <- tig#51, B=197815 nt (start:180345, end:180366) A=875428 nt (start:165873, end:165852) CALCULATED DISTANCE APART: -163343 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.32 -> -889372 <- tig#17, B=972151 nt (start:418898, end:418877) A=1959065 nt (start:490474, end:490453) CALCULATED DISTANCE APART: -889372 < -2000 Pairs unsatisfied in distance within a contig. Pair (CCAAAAAACTCAAGGGGAAAG - ACCATTATCGGACAAAACCGA) on contig 2 (5014909 nt) Astart:1269076 Aend:1269097 Bstart:1283738 Bend:1283717 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in pairing logic within a contig. Pair (TGTTTTGACTTGCATATTTTT - AGAATATTGTTGTAACATGTG) on contig 15 (3712591 nt) Astart:1718133 Aend:1718154 Bstart:1729885 Bend:1729906 Pairs unsatisfied in pairing logic within a contig. Pair (ACAAAATCTAGTAGTTTGCAA - GGATCCACGTAATATATTGTA) on contig 19 (3531543 nt) Astart:3060401 Aend:3060380 Bstart:3048322 Bend:3048301 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#92 -> -2121735 <- tig#16, B=101136 nt (start:2938, end:2959) A=2098954 nt (start:2043537, end:2043516) CALCULATED DISTANCE APART: -2121735 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#27 -> -2274981 <- tig#14, A=1227811 nt (start:935474, end:935495) B=2271162 nt (start:2002644, end:2002623) CALCULATED DISTANCE APART: -2274981 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCCTCTCGTAATGTAATCGTG - CTGAAACTCTCTTCATAATCA) on contig 34 (1705564 nt) Astart:679594 Aend:679573 Bstart:664631 Bend:664652 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig. Pair (TTCTTTGACTTGCTTAGAAGT - ATGGGGGTGTACATCGATGAT) on contig 131 (36503 nt) Astart:30586 Aend:30565 Bstart:14217 Bend:14238 CALCULATED DISTANCE APART: 16369 Pairs unsatisfied in pairing logic within a contig. Pair (ACTAATGAAGACAAAAGCTTT - CAAGTTGCACAGCCTTACCAA) on contig 14 (2271162 nt) Astart:658441 Aend:658420 Bstart:495470 Bend:495449 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#63 -> -539468 <- tig#r.35, A=274372 nt (start:182966, end:182987) B=1135475 nt (start:667413, end:667434) CALCULATED DISTANCE APART: -539468 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33744, end:33723) A=855454 nt (start:18705, end:18684) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.28 -> -4041595 <- tig#8, B=1171658 nt (start:690051, end:690030) A=5070776 nt (start:3371544, end:3371523) CALCULATED DISTANCE APART: -4041595 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#28 -> -913193 <- tig#475, A=1171658 nt (start:238665, end:238686) B=1157 nt (start:200, end:179) CALCULATED DISTANCE APART: -913193 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#11 -> -4878223 <- tig#29, A=4628067 nt (start:683933, end:683954) B=1463708 nt (start:954089, end:954068) CALCULATED DISTANCE APART: -4878223 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGCTTCATATAAAAGTTGGAT - GTTTCCCGACTTGCCACTGCC) on contig 14 (2271162 nt) Astart:1739872 Aend:1739893 Bstart:2002444 Bend:2002423 CALCULATED DISTANCE APART: 262572 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.28 -> -4041595 <- tig#8, B=1171658 nt (start:689981, end:689960) A=5070776 nt (start:3371614, end:3371593) CALCULATED DISTANCE APART: -4041595 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.46 -> -213331 <- tig#51, B=577887 nt (start:159953, end:159932) A=875428 nt (start:73378, end:73357) CALCULATED DISTANCE APART: -213331 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.49 -> -4789751 <- tig#6, B=399963 nt (start:43642, end:43621) A=6870868 nt (start:4766109, end:4766088) CALCULATED DISTANCE APART: -4789751 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -4201 <- tig#r.96, A=262460 nt (start:244251, end:244272) B=91302 nt (start:85310, end:85331) CALCULATED DISTANCE APART: -4201 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTCGAGTTGAGGTTTATATAT - ATTCGCATGGGTCTGTGTTTC) on contig 37 (853709 nt) Astart:538907 Aend:538928 Bstart:551577 Bend:551556 CALCULATED DISTANCE APART: 12670 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.28 -> -4041595 <- tig#8, B=1171658 nt (start:690021, end:690000) A=5070776 nt (start:3371574, end:3371553) CALCULATED DISTANCE APART: -4041595 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460804, end:460783) A=1345436 nt (start:24856, end:24835) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#52 -> -353986 <- tig#1, B=356404 nt (start:104, end:125) A=4853111 nt (start:17686, end:17665) CALCULATED DISTANCE APART: -353986 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#146 -> -25286 <- tig#r.139, A=21489 nt (start:2695, end:2716) B=27696 nt (start:1204, end:1225) CALCULATED DISTANCE APART: -25286 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#73 -> -448830 <- tig#31, B=171056 nt (start:135325, end:135346) A=976128 nt (start:433099, end:433078) CALCULATED DISTANCE APART: -448830 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10368, end:10347) A=2766197 nt (start:2151195, end:2151174) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259307, end:2259328) B=356404 nt (start:343917, end:343938) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#305 -> -2202335 <- tig#r.19, A=1638 nt (start:192, end:213) B=3531543 nt (start:1310654, end:1310675) CALCULATED DISTANCE APART: -2202335 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATTTAGAAGAAAACCCTTTAA - ATGAGAAACAAGCAAAGAACA) on contig 75 (373953 nt) Astart:275710 Aend:275731 Bstart:300428 Bend:300407 CALCULATED DISTANCE APART: 24718 Pairs unsatisfied in distance within a contig. Pair (GAAGTTGAATCTGAATGCGAT - GACATTAACACAACCACACGC) on contig 1 (4853111 nt) Astart:346410 Aend:346431 Bstart:391687 Bend:391666 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig. Pair (TAAAGCGGTCTCCCATTAGAC - GTACATCATTGGTCATTACCG) on contig 14 (2271162 nt) Astart:2001208 Aend:2001187 Bstart:1734441 Bend:1734462 CALCULATED DISTANCE APART: 266767 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#35 -> -916421 <- tig#r.48, A=1135475 nt (start:200709, end:200730) B=487359 nt (start:485704, end:485725) CALCULATED DISTANCE APART: -916421 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.51 -> -3504535 <- tig#7, B=875428 nt (start:833, end:812) A=3534247 nt (start:3523702, end:3523681) CALCULATED DISTANCE APART: -3504535 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219116, end:4219095) A=2598 nt (start:2505, end:2484) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CCCATCTGTCAGATCGAACGG - GCACTCCCACAATCTATATAT) on contig 15 (3712591 nt) Astart:1718273 Aend:1718294 Bstart:1729745 Bend:1729766 Pairs unsatisfied in distance within a contig. Pair (TTCCAAACCTTGGAAGATTTG - TAAAGGGAAGCGTGAACAAAT) on contig 30 (1050452 nt) Astart:649204 Aend:649225 Bstart:664970 Bend:664949 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in distance within a contig. Pair (TCTATAGATGTCCAAAGTGTG - TTTTGTTACTTCGTGTAGAAC) on contig 5 (3689108 nt) Astart:1169482 Aend:1169503 Bstart:1184617 Bend:1184596 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -7514397 <- tig#2, B=4628067 nt (start:4149962, end:4149941) A=5014909 nt (start:3384435, end:3384414) CALCULATED DISTANCE APART: -7514397 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CCGGATAGAACCTCCAACATC - GTACTGTTAAAATAATCACAT) on contig 15 (3712591 nt) Astart:1792221 Aend:1792200 Bstart:2056277 Bend:2056298 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#25 -> -666259 <- tig#2, B=1290536 nt (start:852917, end:852938) A=5014909 nt (start:248640, end:248619) CALCULATED DISTANCE APART: -666259 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282117, end:282138) B=2196 nt (start:298, end:277) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTCTGTTTATCTCAGTCTACA - CACAGCTACCAAAACAGATTC) on contig 31 (976128 nt) Astart:479850 Aend:479871 Bstart:492684 Bend:492663 CALCULATED DISTANCE APART: 12834 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2325, end:2346) A=258385 nt (start:861, end:840) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig. Pair (AATGGTGAATCACCTTATCTT - ATCCATCAAAATGACGTCGGA) on contig 2 (5014909 nt) Astart:1269996 Aend:1270017 Bstart:1284658 Bend:1284637 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -1168778 <- tig#384, A=5070776 nt (start:3882195, end:3882216) B=1359 nt (start:197, end:176) CALCULATED DISTANCE APART: -1168778 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CCAGATGGATTTCACACAAAA - GTTTGGTCTCAGAACAACTTA) on contig 4 (3837743 nt) Astart:2358416 Aend:2358437 Bstart:2359646 Bend:2359667 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#38 -> -2074550 <- tig#25, B=1143067 nt (start:41617, end:41638) A=1290536 nt (start:993100, end:993079) CALCULATED DISTANCE APART: -2074550 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282507, end:282528) B=2196 nt (start:688, end:667) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17185, end:17164) A=1227811 nt (start:6630, end:6609) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#120 -> -1341554 <- tig#29, B=44710 nt (start:43032, end:43053) A=1463708 nt (start:1359876, end:1359855) CALCULATED DISTANCE APART: -1341554 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259532, end:2259553) B=356404 nt (start:343692, end:343713) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#305 -> -2202335 <- tig#r.19, A=1638 nt (start:212, end:233) B=3531543 nt (start:1310634, end:1310655) CALCULATED DISTANCE APART: -2202335 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730162, end:730183) B=3531543 nt (start:3199736, end:3199715) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTTGAGTATAGTGGAAAAGTG - TTCCTCAGGAATTCCAAGCCG) on contig 37 (853709 nt) Astart:838909 Aend:838888 Bstart:823404 Bend:823425 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in pairing logic within a contig. Pair (CCCGGCCAGGTAATGATGATA - TTGGGCTTCGCTCATGTATGT) on contig 6 (6870868 nt) Astart:2439993 Aend:2440014 Bstart:2446700 Bend:2446721 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#47 -> -583213 <- tig#r.69, A=471458 nt (start:9923, end:9944) B=186132 nt (start:44454, end:44475) CALCULATED DISTANCE APART: -583213 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135783, end:135804) B=15068 nt (start:1893, end:1914) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728833, end:728854) A=1096 nt (start:918, end:897) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig. Pair (GAGAATCATAAAGAAGACAAA - CTCCAGAACCACTCACACCGC) on contig 14 (2271162 nt) Astart:1978674 Aend:1978695 Bstart:2002844 Bend:2002823 CALCULATED DISTANCE APART: 24170 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#49 -> -1152645 <- tig#r.43, A=399963 nt (start:351726, end:351747) B=1235946 nt (start:111538, end:111559) CALCULATED DISTANCE APART: -1152645 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728743, end:728764) A=1096 nt (start:828, end:807) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#5 -> -5542232 <- tig#7, B=3689108 nt (start:381178, end:381199) A=3534247 nt (start:2254302, end:2254281) CALCULATED DISTANCE APART: -5542232 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AAATAGTGTGGGAGTGGCAGA - TAACAAAACGAATTTTTCAGT) on contig 15 (3712591 nt) Astart:1719243 Aend:1719264 Bstart:1728775 Bend:1728796 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -4201 <- tig#r.96, A=262460 nt (start:244326, end:244347) B=91302 nt (start:85235, end:85256) CALCULATED DISTANCE APART: -4201 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#12 -> -167604 <- tig#557, B=2766197 nt (start:2579514, end:2579535) A=1050 nt (start:921, end:900) CALCULATED DISTANCE APART: -167604 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#25 -> -666259 <- tig#2, B=1290536 nt (start:852827, end:852848) A=5014909 nt (start:248550, end:248529) CALCULATED DISTANCE APART: -666259 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.257 -> -2902765 <- tig#8, B=1995 nt (start:1591, end:1570) A=5070776 nt (start:2921174, end:2921153) CALCULATED DISTANCE APART: -2902765 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4186204, end:4186183) A=3712591 nt (start:357, end:336) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460744, end:460723) A=1345436 nt (start:24916, end:24895) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTAATTACGCTTTAGCTACAA - TTTTAACTTTGATCAATGGAT) on contig 15 (3712591 nt) Astart:1717408 Aend:1717429 Bstart:1730610 Bend:1730631 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730297, end:730318) B=3531543 nt (start:3199871, end:3199850) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.115 -> -3755846 <- tig#9, B=66709 nt (start:40963, end:40942) A=3747885 nt (start:3734883, end:3734862) CALCULATED DISTANCE APART: -3755846 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728178, end:728199) A=1096 nt (start:263, end:242) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CGTCATCGTCAACGACTTCGT - TCTTGACGTATACAATGACTT) on contig 15 (3712591 nt) Astart:1717073 Aend:1717094 Bstart:1730945 Bend:1730966 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#34 -> -3900848 <- tig#r.11, A=1705564 nt (start:54557, end:54578) B=4628067 nt (start:2358226, end:2358247) CALCULATED DISTANCE APART: -3900848 < -2000 Pairs unsatisfied in distance within a contig. Pair (CGATGTTGCATTGCAGGCAGG - AGTTCATCTTCTTCTTTAGCA) on contig 5 (3689108 nt) Astart:1170112 Aend:1170133 Bstart:1185247 Bend:1185226 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in pairing logic within a contig. Pair (AGCTAGTTGAGAATTGTGATT - TATTATCATTCCTACCTTTCC) on contig 19 (3531543 nt) Astart:3059841 Aend:3059820 Bstart:3048882 Bend:3048861 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460759, end:460738) A=1345436 nt (start:24901, end:24880) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCTCTTATTTATTGTGAATTT - GGGCCAGCAGAAACTTAACAA) on contig 30 (1050452 nt) Astart:650339 Aend:650360 Bstart:666105 Bend:666084 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in pairing logic within a contig. Pair (AATATGTGATTTTTTATACGG - GTCCATAGCCCAAGTAAGGGC) on contig 19 (3531543 nt) Astart:3059526 Aend:3059505 Bstart:3049197 Bend:3049176 Pairs unsatisfied in pairing logic within a contig. Pair (CGTTATAAAATTTAAATTATA - AAAGAAAACTTTGTACATTAA) on contig 19 (3531543 nt) Astart:3060421 Aend:3060400 Bstart:3048302 Bend:3048281 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:1925, end:1946) A=258385 nt (start:461, end:440) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136363, end:136384) B=15068 nt (start:1313, end:1334) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#84 -> -18433 <- tig#r.290, A=197079 nt (start:159360, end:159381) B=1721 nt (start:1007, end:1028) CALCULATED DISTANCE APART: -18433 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -4201 <- tig#r.96, A=262460 nt (start:244501, end:244522) B=91302 nt (start:85060, end:85081) CALCULATED DISTANCE APART: -4201 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2425, end:2446) A=258385 nt (start:961, end:940) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTGTAAATCACACGTACCATC - CACTAATGGTTCTTGTCATGA) on contig 25 (1290536 nt) Astart:990309 Aend:990288 Bstart:975775 Bend:975796 CALCULATED DISTANCE APART: 14534 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -621133 <- tig#r.66, A=2766197 nt (start:2129528, end:2129549) B=201913 nt (start:197449, end:197470) CALCULATED DISTANCE APART: -621133 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GGATATTTTGAAGTAAACTGT - GATATTCAAATTTATAGAAAA) on contig 19 (3531543 nt) Astart:3059346 Aend:3059325 Bstart:3049377 Bend:3049356 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730327, end:730348) B=3531543 nt (start:3199901, end:3199880) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#118 -> -33564 <- tig#97, B=66247 nt (start:38282, end:38303) A=91050 nt (start:25599, end:25578) CALCULATED DISTANCE APART: -33564 < -2000 Pairs unsatisfied in distance within a contig. Pair (GCTCGTCTTCTTTCTTTGGCA - CTTTTTGCTATGCCTTTGCGG) on contig 5 (3689108 nt) Astart:1169957 Aend:1169978 Bstart:1185092 Bend:1185071 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728063, end:728084) A=1096 nt (start:148, end:127) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185619, end:4185598) A=3712591 nt (start:942, end:921) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig. Pair (GATTCTCTATACAGTTTTACA - CGTTTTGAAAGATCATATATA) on contig 37 (853709 nt) Astart:838764 Aend:838743 Bstart:823259 Bend:823280 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#265 -> -3126344 <- tig#4, A=1946 nt (start:1686, end:1707) B=3837743 nt (start:3146084, end:3146063) CALCULATED DISTANCE APART: -3126344 < -2000 Pairs unsatisfied in distance within a contig. Pair (TATTATATCAATGAGAGGTCG - CATGAATGTTAAGCTTCTTCG) on contig 2 (5014909 nt) Astart:1269036 Aend:1269057 Bstart:1283698 Bend:1283677 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#54 -> -868447 <- tig#30, A=625914 nt (start:324412, end:324433) B=1050452 nt (start:586945, end:586924) CALCULATED DISTANCE APART: -868447 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#3 -> -3661478 <- tig#r.56, A=3889482 nt (start:401876, end:401897) B=262460 nt (start:68588, end:68609) CALCULATED DISTANCE APART: -3661478 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4186189, end:4186168) A=3712591 nt (start:372, end:351) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -214292 <- tig#6, A=354284 nt (start:133735, end:133756) B=6870868 nt (start:13743, end:13722) CALCULATED DISTANCE APART: -214292 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728473, end:728494) A=1096 nt (start:558, end:537) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#56 -> -1319014 <- tig#29, B=262460 nt (start:154760, end:154781) A=1463708 nt (start:1231314, end:1231293) CALCULATED DISTANCE APART: -1319014 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#22 -> -6369342 <- tig#6, B=1636463 nt (start:14560, end:14581) A=6870868 nt (start:4767439, end:4767418) CALCULATED DISTANCE APART: -6369342 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAAGTTCAGATCATTGGCCAC - GGGATTTTTGTTTTGTAAAGA) on contig 34 (1705564 nt) Astart:679699 Aend:679678 Bstart:664736 Bend:664757 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#16 -> -1845669 <- tig#270, B=2098954 nt (start:233406, end:233427) A=1880 nt (start:121, end:100) CALCULATED DISTANCE APART: -1845669 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#119 -> -7707 <- tig#r.49, A=46878 nt (start:31815, end:31836) B=399963 nt (start:387319, end:387340) CALCULATED DISTANCE APART: -7707 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#64 -> -210549 <- tig#109, B=211265 nt (start:392, end:413) A=66564 nt (start:19676, end:19655) CALCULATED DISTANCE APART: -210549 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.38 -> -1426764 <- tig#29, B=1143067 nt (start:1039694, end:1039673) A=1463708 nt (start:407070, end:407049) CALCULATED DISTANCE APART: -1426764 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135403, end:135424) B=15068 nt (start:2273, end:2294) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.403 -> -2330792 <- tig#13, B=1321 nt (start:750, end:729) A=2650694 nt (start:2350042, end:2350021) CALCULATED DISTANCE APART: -2330792 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135553, end:135574) B=15068 nt (start:2123, end:2144) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AATACATATAATCATAAAAAT - CTCGAAAATATACAGATTTCA) on contig 19 (3531543 nt) Astart:3060256 Aend:3060235 Bstart:3048467 Bend:3048446 Pairs unsatisfied in distance within a contig. Pair (TCTTGTTTGTCTTTTTTTTTT - CTGATTAAATTTCATATTAAT) on contig 5 (3689108 nt) Astart:1170057 Aend:1170078 Bstart:1185192 Bend:1185171 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.459 -> -147882 <- tig#53, B=1183 nt (start:61, end:40) A=354284 nt (start:167821, end:167800) CALCULATED DISTANCE APART: -147882 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#118 -> -33564 <- tig#97, B=66247 nt (start:37942, end:37963) A=91050 nt (start:25259, end:25238) CALCULATED DISTANCE APART: -33564 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259952, end:2259973) B=356404 nt (start:343272, end:343293) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460764, end:460743) A=1345436 nt (start:24896, end:24875) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.91 -> -51057 <- tig#31, B=101959 nt (start:15590, end:15569) A=976128 nt (start:55467, end:55446) CALCULATED DISTANCE APART: -51057 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#77 -> -122338 <- tig#99, B=160344 nt (start:25164, end:25185) A=88102 nt (start:7158, end:7137) CALCULATED DISTANCE APART: -122338 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -946177 <- tig#r.35, A=2650694 nt (start:2507763, end:2507784) B=1135475 nt (start:312229, end:312250) CALCULATED DISTANCE APART: -946177 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CTCACTGATGTCATCTCCTAT - CCTGTGATATGATTGTAGTAA) on contig 7 (3534247 nt) Astart:2255062 Aend:2255041 Bstart:2239712 Bend:2239691 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282342, end:282363) B=2196 nt (start:523, end:502) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGAAACAGAACTCCTTATCGT - ACAGTACTTTCAGCCGTTTCA) on contig 4 (3837743 nt) Astart:2358331 Aend:2358352 Bstart:2359731 Bend:2359752 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -621133 <- tig#r.66, A=2766197 nt (start:2129728, end:2129749) B=201913 nt (start:197249, end:197270) CALCULATED DISTANCE APART: -621133 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.42 -> -1433157 <- tig#20, B=659641 nt (start:2313, end:2292) A=2328057 nt (start:1450844, end:1450823) CALCULATED DISTANCE APART: -1433157 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#10 -> -2925308 <- tig#9, B=3047199 nt (start:251219, end:251240) A=3747885 nt (start:149328, end:149307) CALCULATED DISTANCE APART: -2925308 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:34049, end:34028) A=855454 nt (start:18400, end:18379) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728233, end:728254) A=1096 nt (start:318, end:297) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16580, end:16559) A=1227811 nt (start:7235, end:7214) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282212, end:282233) B=2196 nt (start:393, end:372) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#36 -> -890564 <- tig#31, B=855454 nt (start:85209, end:85230) A=976128 nt (start:140319, end:140298) CALCULATED DISTANCE APART: -890564 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#11 -> -4878196 <- tig#29, A=4628067 nt (start:684350, end:684371) B=1463708 nt (start:954479, end:954458) CALCULATED DISTANCE APART: -4878196 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4186119, end:4186098) A=3712591 nt (start:442, end:421) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig. Pair (AACGCGTTGATTAAGATGTAT - TGTCTCTTCTTCTCCATTTTT) on contig 34 (1705564 nt) Astart:679939 Aend:679918 Bstart:664976 Bend:664997 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in pairing logic within a contig. Pair (CTGTCAGATCGAACGGATATT - CACACGCACTCCCACAATCTA) on contig 15 (3712591 nt) Astart:1718278 Aend:1718299 Bstart:1729740 Bend:1729761 Pairs unsatisfied in distance within a contig. Pair (CAACTGCTTGATGCGAGTCTT - GAAGCTATAATTCCCTTTCTC) on contig 1 (4853111 nt) Astart:346335 Aend:346356 Bstart:391612 Bend:391591 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12601, end:12580) A=91302 nt (start:11592, end:11571) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig. Pair (TATTGTTGTCCTGAAGGTGAA - ACTGTTGAAATCCCGAAGAGT) on contig 41 (667251 nt) Astart:88333 Aend:88312 Bstart:75653 Bend:75674 CALCULATED DISTANCE APART: 12680 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259237, end:2259258) B=356404 nt (start:343987, end:344008) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig. Pair (CATCGAAGGTAACAGAGTAGT - TACATGAAGCACTTTTTCTTC) on contig 37 (853709 nt) Astart:538662 Aend:538683 Bstart:551332 Bend:551311 CALCULATED DISTANCE APART: 12670 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.403 -> -2330792 <- tig#13, B=1321 nt (start:465, end:444) A=2650694 nt (start:2350327, end:2350306) CALCULATED DISTANCE APART: -2330792 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#38 -> -2074550 <- tig#25, B=1143067 nt (start:41627, end:41648) A=1290536 nt (start:993110, end:993089) CALCULATED DISTANCE APART: -2074550 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#34 -> -1056103 <- tig#r.65, A=1705564 nt (start:662501, end:662522) B=286124 nt (start:253084, end:253105) CALCULATED DISTANCE APART: -1056103 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TAAGAAAAGGAAATTTGACAA - ATCAAAAATCTGGCTAAATAC) on contig 48 (487359 nt) Astart:38267 Aend:38288 Bstart:385707 Bend:385728 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#423 -> -926237 <- tig#34, A=1276 nt (start:19, end:40) B=1705564 nt (start:944980, end:944959) CALCULATED DISTANCE APART: -926237 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#19 -> -2666312 <- tig#74, A=3531543 nt (start:871665, end:871686) B=238371 nt (start:26434, end:26413) CALCULATED DISTANCE APART: -2666312 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#47 -> -293197 <- tig#6, A=471458 nt (start:171889, end:171910) B=6870868 nt (start:13628, end:13607) CALCULATED DISTANCE APART: -293197 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGAAATCAATAAGATGTGTCT - GATATAGACACCACTTGAATG) on contig 2 (5014909 nt) Astart:1269916 Aend:1269937 Bstart:1284578 Bend:1284557 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#22 -> -1615678 <- tig#20, B=1636463 nt (start:10966, end:10987) A=2328057 nt (start:10181, end:10160) CALCULATED DISTANCE APART: -1615678 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33424, end:33403) A=855454 nt (start:19025, end:19004) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#25 -> -666259 <- tig#2, B=1290536 nt (start:852907, end:852928) A=5014909 nt (start:248630, end:248609) CALCULATED DISTANCE APART: -666259 < -2000 Pairs unsatisfied in distance within a contig. Pair (GATTGTGCAAGTGAAATGGAG - TTTCTGATTAAATTGCACGTT) on contig 6 (6870868 nt) Astart:1137734 Aend:1137713 Bstart:1129307 Bend:1129328 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728578, end:728599) A=1096 nt (start:663, end:642) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.86 -> -399562 <- tig#84, B=280231 nt (start:222728, end:222707) A=197079 nt (start:196834, end:196813) CALCULATED DISTANCE APART: -399562 < -2000 Pairs unsatisfied in distance within a contig. Pair (GAAGCACAAAAATAAAATAAA - TATATAAGAATTTATGGTACT) on contig 6 (6870868 nt) Astart:1137894 Aend:1137873 Bstart:1129467 Bend:1129488 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#9 -> -2729016 <- tig#69, A=3747885 nt (start:1134553, end:1134574) B=186132 nt (start:135684, end:135663) CALCULATED DISTANCE APART: -2729016 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#36 -> -64204 <- tig#94, A=855454 nt (start:790180, end:790201) B=93323 nt (start:18930, end:18909) CALCULATED DISTANCE APART: -64204 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -40662 <- tig#443, A=736718 nt (start:676536, end:676557) B=1213 nt (start:480, end:459) CALCULATED DISTANCE APART: -40662 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3583 <- tig#26, B=1171658 nt (start:1171523, end:1171544) A=1332708 nt (start:23448, end:23427) CALCULATED DISTANCE APART: -3583 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728523, end:728544) A=1096 nt (start:608, end:587) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#26 -> -90650 <- tig#95, B=1332708 nt (start:1310508, end:1310529) A=92653 nt (start:88450, end:88429) CALCULATED DISTANCE APART: -90650 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#38 -> -1662869 <- tig#54, A=1143067 nt (start:65296, end:65317) B=625914 nt (start:605098, end:605077) CALCULATED DISTANCE APART: -1662869 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#84 -> -19704 <- tig#129, B=197079 nt (start:196802, end:196823) A=39603 nt (start:39427, end:39406) CALCULATED DISTANCE APART: -19704 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3583 <- tig#26, B=1171658 nt (start:1171048, end:1171069) A=1332708 nt (start:22973, end:22952) CALCULATED DISTANCE APART: -3583 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730197, end:730218) B=3531543 nt (start:3199771, end:3199750) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#6 -> -444421 <- tig#98, B=6870868 nt (start:6428121, end:6428142) A=88184 nt (start:21674, end:21653) CALCULATED DISTANCE APART: -444421 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2895, end:2916) A=258385 nt (start:1431, end:1410) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460894, end:460873) A=1345436 nt (start:24766, end:24745) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33589, end:33568) A=855454 nt (start:18860, end:18839) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.328 -> -54701 <- tig#102, B=1508 nt (start:1156, end:1135) A=83426 nt (start:73545, end:73524) CALCULATED DISTANCE APART: -54701 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#12 -> -2853192 <- tig#9, B=2766197 nt (start:1812596, end:1812617) A=3747885 nt (start:1919591, end:1919570) CALCULATED DISTANCE APART: -2853192 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.403 -> -2330792 <- tig#13, B=1321 nt (start:185, end:164) A=2650694 nt (start:2350607, end:2350586) CALCULATED DISTANCE APART: -2330792 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AAACAACAGTAGATCCATAAG - ATTTTCACCAGCTCGGTACAA) on contig 19 (3531543 nt) Astart:3059461 Aend:3059440 Bstart:3049262 Bend:3049241 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2085, end:2106) A=258385 nt (start:621, end:600) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GAGCCACAGCGGAACTTGCTG - AATACCCTTTGACTAGAAAAA) on contig 48 (487359 nt) Astart:38342 Aend:38363 Bstart:385632 Bend:385653 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.42 -> -1433157 <- tig#20, B=659641 nt (start:2388, end:2367) A=2328057 nt (start:1450769, end:1450748) CALCULATED DISTANCE APART: -1433157 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219561, end:4219540) A=2598 nt (start:2060, end:2039) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:729922, end:729943) B=3531543 nt (start:3199496, end:3199475) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -214291 <- tig#6, A=354284 nt (start:133101, end:133122) B=6870868 nt (start:13108, end:13087) CALCULATED DISTANCE APART: -214291 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730047, end:730068) B=3531543 nt (start:3199621, end:3199600) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136583, end:136604) B=15068 nt (start:1093, end:1114) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259557, end:2259578) B=356404 nt (start:343667, end:343688) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CATGACTCCCGAAGCCTAAAA - GTACGAATTTTCTCATAAGAG) on contig 15 (3712591 nt) Astart:1792286 Aend:1792265 Bstart:2056257 Bend:2056278 Pairs unsatisfied in pairing logic within a contig. Pair (GCATCAAATCTTAGAATATAT - AATCTAGAATTCTATGTATCG) on contig 19 (3531543 nt) Astart:3059501 Aend:3059480 Bstart:3049222 Bend:3049201 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#2 -> -6085454 <- tig#25, A=5014909 nt (start:11420, end:11441) B=1290536 nt (start:1101965, end:1101944) CALCULATED DISTANCE APART: -6085454 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#127 -> -57440 <- tig#17, B=80830 nt (start:63145, end:63166) A=1959065 nt (start:59755, end:59734) CALCULATED DISTANCE APART: -57440 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185789, end:4185768) A=3712591 nt (start:772, end:751) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.403 -> -2330792 <- tig#13, B=1321 nt (start:360, end:339) A=2650694 nt (start:2350432, end:2350411) CALCULATED DISTANCE APART: -2330792 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#118 -> -33564 <- tig#97, B=66247 nt (start:38127, end:38148) A=91050 nt (start:25444, end:25423) CALCULATED DISTANCE APART: -33564 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAGGCAAAACCAACACAAATC - ATGGCCACACAAATAAGCTGA) on contig 27 (1227811 nt) Astart:434595 Aend:434616 Bstart:450848 Bend:450827 CALCULATED DISTANCE APART: 16253 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#36 -> -786940 <- tig#23, A=855454 nt (start:790050, end:790071) B=1345436 nt (start:741536, end:741515) CALCULATED DISTANCE APART: -786940 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#26 -> -90650 <- tig#95, B=1332708 nt (start:1310638, end:1310659) A=92653 nt (start:88580, end:88559) CALCULATED DISTANCE APART: -90650 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#43 -> -1009131 <- tig#73, B=1235946 nt (start:225486, end:225507) A=171056 nt (start:18671, end:18650) CALCULATED DISTANCE APART: -1009131 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAAGTACACAAAATATCTAGA - CGAAAGATAGAATAGAGGCTA) on contig 13 (2650694 nt) Astart:1947180 Aend:1947201 Bstart:1962828 Bend:1962807 CALCULATED DISTANCE APART: 15648 Pairs unsatisfied in distance within a contig. Pair (AGTAGTTCCCTCGACTACAAT - AGCTCTTATGGTACATACATG) on contig 37 (853709 nt) Astart:538677 Aend:538698 Bstart:551347 Bend:551326 CALCULATED DISTANCE APART: 12670 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728593, end:728614) A=1096 nt (start:678, end:657) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185979, end:4185958) A=3712591 nt (start:582, end:561) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig. Pair (ACCATTTATATTATTCCCATT - ACAGAGAGACAAAGAGATAAC) on contig 34 (1705564 nt) Astart:679334 Aend:679313 Bstart:664371 Bend:664392 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in pairing logic within a contig. Pair (ATTTATCGATAGATTTACCAT - AATTGAGAAATCATTTGTATT) on contig 15 (3712591 nt) Astart:1717663 Aend:1717684 Bstart:1730355 Bend:1730376 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12321, end:12300) A=91302 nt (start:11872, end:11851) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260832, end:2260853) B=356404 nt (start:342392, end:342413) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#7 -> -192832 <- tig#35, B=3534247 nt (start:3524777, end:3524798) A=1135475 nt (start:203362, end:203341) CALCULATED DISTANCE APART: -192832 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#118 -> -33564 <- tig#97, B=66247 nt (start:37887, end:37908) A=91050 nt (start:25204, end:25183) CALCULATED DISTANCE APART: -33564 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:458644, end:458623) A=1345436 nt (start:27016, end:26995) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2530, end:2551) A=258385 nt (start:1066, end:1045) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTAAAATAGTTCAAAAATATT - CCCTGTTAATTGAGTTTATTT) on contig 109 (66564 nt) Astart:6139 Aend:6118 Bstart:518 Bend:539 CALCULATED DISTANCE APART: 5621 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#283 -> -3818458 <- tig#2, A=1768 nt (start:493, end:514) B=5014909 nt (start:3837183, end:3837162) CALCULATED DISTANCE APART: -3818458 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#56 -> -1319384 <- tig#29, B=262460 nt (start:154755, end:154776) A=1463708 nt (start:1231679, end:1231658) CALCULATED DISTANCE APART: -1319384 < -2000 Pairs unsatisfied in distance within a contig. Pair (TAAATCGGCAGGTCTATATTT - TATATTTTATGATTTCATATT) on contig 5 (3689108 nt) Astart:1169897 Aend:1169918 Bstart:1185032 Bend:1185011 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.91 -> -52839 <- tig#31, B=101959 nt (start:14725, end:14704) A=976128 nt (start:58114, end:58093) CALCULATED DISTANCE APART: -52839 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTAAGAGAGTACGTTTTTCTT - AAAAGAGTAAGTATTGATGGT) on contig 30 (1050452 nt) Astart:649314 Aend:649335 Bstart:665080 Bend:665059 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10648, end:10627) A=2766197 nt (start:2150915, end:2150894) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGTTCACTGCATTCTTTGTGG - CTGGCTAGACAAGTCTTTCAT) on contig 37 (853709 nt) Astart:538957 Aend:538978 Bstart:551627 Bend:551606 CALCULATED DISTANCE APART: 12670 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#90 -> -432931 <- tig#r.49, A=112304 nt (start:16008, end:16029) B=399963 nt (start:43328, end:43349) CALCULATED DISTANCE APART: -432931 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#4 -> -2752665 <- tig#9, B=3837743 nt (start:2984579, end:2984600) A=3747885 nt (start:1919501, end:1919480) CALCULATED DISTANCE APART: -2752665 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#42 -> -1103003 <- tig#r.43, A=659641 nt (start:546723, end:546744) B=1235946 nt (start:225861, end:225882) CALCULATED DISTANCE APART: -1103003 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#6 -> -40181 <- tig#91, A=6870868 nt (start:6825692, end:6825713) B=101959 nt (start:15005, end:14984) CALCULATED DISTANCE APART: -40181 < -2000 Pairs unsatisfied in distance within a contig. Pair (GGTTGGTACTTAGTAGTCTAA - TAAAATATTCTGTAGATGACG) on contig 37 (853709 nt) Astart:838504 Aend:838483 Bstart:822999 Bend:823020 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in pairing logic within a contig. Pair (CGTATAGGCCCTTGGATTTAT - TGTATTTTATCATTTTTCATT) on contig 15 (3712591 nt) Astart:1717648 Aend:1717669 Bstart:1730370 Bend:1730391 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459609, end:459588) A=1345436 nt (start:26051, end:26030) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.304 -> -169359 <- tig#48, B=1641 nt (start:694, end:673) A=487359 nt (start:188665, end:188644) CALCULATED DISTANCE APART: -169359 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#120 -> -1341554 <- tig#29, B=44710 nt (start:43517, end:43538) A=1463708 nt (start:1360361, end:1360340) CALCULATED DISTANCE APART: -1341554 < -2000 Pairs unsatisfied in distance within a contig. Pair (TATTATCATATATAGCATTTC - GTAATAAAGAGGGAAATAAAT) on contig 15 (3712591 nt) Astart:3350025 Aend:3350046 Bstart:3375013 Bend:3374992 CALCULATED DISTANCE APART: 24988 Pairs unsatisfied in pairing logic within a contig. Pair (GTTTGTGCTTGTTCCCAATGT - ATTGACTTCTATGATGTACTT) on contig 15 (3712591 nt) Astart:1717268 Aend:1717289 Bstart:1730750 Bend:1730771 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#135 -> -2671150 <- tig#12, A=39094 nt (start:37701, end:37722) B=2766197 nt (start:2689757, end:2689736) CALCULATED DISTANCE APART: -2671150 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.54 -> -242536 <- tig#53, B=625914 nt (start:94515, end:94494) A=354284 nt (start:168021, end:168000) CALCULATED DISTANCE APART: -242536 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259162, end:2259183) B=356404 nt (start:344062, end:344083) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#23 -> -1012915 <- tig#r.43, A=1345436 nt (start:859984, end:860005) B=1235946 nt (start:688483, end:688504) CALCULATED DISTANCE APART: -1012915 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10483, end:10462) A=2766197 nt (start:2151080, end:2151059) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig. Pair (CAAGTTATTTTGAAACTTAGG - GCCTAGGCCAATCAAGCCAGC) on contig 37 (853709 nt) Astart:838714 Aend:838693 Bstart:823209 Bend:823230 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in distance within a contig. Pair (GAAGGATGAGGCAGAGACTTA - AAGTATTTTCAGAAGAAAGGA) on contig 2 (5014909 nt) Astart:1269596 Aend:1269617 Bstart:1284258 Bend:1284237 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.5 -> -540657 <- tig#9, B=3689108 nt (start:388879, end:388858) A=3747885 nt (start:171778, end:171757) CALCULATED DISTANCE APART: -540657 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.257 -> -2902765 <- tig#8, B=1995 nt (start:1061, end:1040) A=5070776 nt (start:2921704, end:2921683) CALCULATED DISTANCE APART: -2902765 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#11 -> -4381731 <- tig#79, A=4628067 nt (start:266822, end:266843) B=136600 nt (start:40486, end:40465) CALCULATED DISTANCE APART: -4381731 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282652, end:282673) B=2196 nt (start:833, end:812) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:729817, end:729838) B=3531543 nt (start:3199391, end:3199370) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig. Pair (GCTAGAATACCTTGGGGCGAG - TCCAGAAGAGACAAGTTGATC) on contig 41 (667251 nt) Astart:88728 Aend:88707 Bstart:76048 Bend:76069 CALCULATED DISTANCE APART: 12680 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#6 -> -3712398 <- tig#1, A=6870868 nt (start:5007477, end:5007498) B=4853111 nt (start:1869007, end:1868986) CALCULATED DISTANCE APART: -3712398 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.403 -> -2330792 <- tig#13, B=1321 nt (start:1040, end:1019) A=2650694 nt (start:2349752, end:2349731) CALCULATED DISTANCE APART: -2330792 < -2000 Pairs unsatisfied in distance within a contig. Pair (TAACAGCTCTTGATGTTACAA - GTCGGGGTGGAGCAGAGTGTT) on contig 37 (853709 nt) Astart:539062 Aend:539083 Bstart:551732 Bend:551711 CALCULATED DISTANCE APART: 12670 Pairs unsatisfied in pairing logic within a contig. Pair (ACGGTTTCCAAGGAAAATCTG - ATCCACATATATACGCCAAAG) on contig 15 (3712591 nt) Astart:1718523 Aend:1718544 Bstart:1729495 Bend:1729516 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#19 -> -1649636 <- tig#31, A=3531543 nt (start:1878912, end:1878933) B=976128 nt (start:17005, end:16984) CALCULATED DISTANCE APART: -1649636 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219186, end:4219165) A=2598 nt (start:2435, end:2414) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#79 -> -614150 <- tig#r.2, A=136600 nt (start:76387, end:76408) B=5014909 nt (start:4440972, end:4440993) CALCULATED DISTANCE APART: -614150 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#3 -> -3661478 <- tig#r.56, A=3889482 nt (start:401866, end:401887) B=262460 nt (start:68598, end:68619) CALCULATED DISTANCE APART: -3661478 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#36 -> -228489 <- tig#r.83, A=855454 nt (start:790810, end:790831) B=235136 nt (start:51291, end:51312) CALCULATED DISTANCE APART: -228489 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#125 -> -34982 <- tig#r.7, A=54013 nt (start:8621, end:8642) B=3534247 nt (start:3524657, end:3524678) CALCULATED DISTANCE APART: -34982 < -2000 Pairs unsatisfied in distance within a contig. Pair (CAAGCACCTTGCTCTGTCGGC - TTTTATTTTTATTTTCAGTTT) on contig 5 (3689108 nt) Astart:1171842 Aend:1171863 Bstart:1186978 Bend:1186957 CALCULATED DISTANCE APART: 15136 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460879, end:460858) A=1345436 nt (start:24781, end:24760) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#52 -> -353986 <- tig#1, B=356404 nt (start:109, end:130) A=4853111 nt (start:17691, end:17670) CALCULATED DISTANCE APART: -353986 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082812, end:2082833) B=976128 nt (start:960710, end:960731) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:458679, end:458658) A=1345436 nt (start:26981, end:26960) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#148 -> -1869235 <- tig#15, A=35830 nt (start:34004, end:34025) B=3712591 nt (start:1887409, end:1887388) CALCULATED DISTANCE APART: -1869235 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282922, end:282943) B=2196 nt (start:1103, end:1082) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig. Pair (ACCAGATCAATGGGCCTTTAA - GGGAGCATGACAATCCTGAGG) on contig 1 (4853111 nt) Astart:345950 Aend:345971 Bstart:391227 Bend:391206 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig. Pair (AAGGAGAGGTTTACACCTAAT - CAATGACCTCCTGAGTTCCAT) on contig 1 (4853111 nt) Astart:346965 Aend:346986 Bstart:392242 Bend:392221 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.20 -> -2413469 <- tig#37, B=2328057 nt (start:2055455, end:2055434) A=853709 nt (start:378014, end:377993) CALCULATED DISTANCE APART: -2413469 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459694, end:459673) A=1345436 nt (start:25966, end:25945) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATTTATTTTTACTAACAAAAA - CGATGAGATTGCTAGGGAAGT) on contig 109 (66564 nt) Astart:5644 Aend:5623 Bstart:8 Bend:29 CALCULATED DISTANCE APART: 5636 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -40662 <- tig#443, A=736718 nt (start:676901, end:676922) B=1213 nt (start:845, end:824) CALCULATED DISTANCE APART: -40662 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAGAACCACATGAAAGCCTTA - TGTCAAAAGTTTAATTACCAG) on contig 5 (3689108 nt) Astart:1171897 Aend:1171918 Bstart:1187033 Bend:1187012 CALCULATED DISTANCE APART: 15136 Pairs unsatisfied in distance within a contig. Pair (CAAGCGAAGAAACTCAAATCC - TTTTTGATTAAGAACAAAATA) on contig 5 (3689108 nt) Astart:1178532 Aend:1178511 Bstart:1163398 Bend:1163419 CALCULATED DISTANCE APART: 15134 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082737, end:2082758) B=976128 nt (start:960785, end:960806) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -1168778 <- tig#384, A=5070776 nt (start:3882930, end:3882951) B=1359 nt (start:932, end:911) CALCULATED DISTANCE APART: -1168778 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459049, end:459028) A=1345436 nt (start:26611, end:26590) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282122, end:282143) B=2196 nt (start:303, end:282) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGAACTCACTTAAGATTTTGA - AATTTAATTGAATATTTAGAA) on contig 5 (3689108 nt) Astart:1169627 Aend:1169648 Bstart:1184762 Bend:1184741 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#6 -> -2693509 <- tig#r.54, A=6870868 nt (start:4745964, end:4745985) B=625914 nt (start:37309, end:37330) CALCULATED DISTANCE APART: -2693509 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGGCTATTTTTTCCCCTCTTC - TAGGGATTAAGGGGATCTCCT) on contig 6 (6870868 nt) Astart:1138539 Aend:1138518 Bstart:1130114 Bend:1130135 CALCULATED DISTANCE APART: 8425 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728113, end:728134) A=1096 nt (start:198, end:177) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#34 -> -1107961 <- tig#79, A=1705564 nt (start:661381, end:661402) B=136600 nt (start:83778, end:83757) CALCULATED DISTANCE APART: -1107961 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460254, end:460233) A=1345436 nt (start:25406, end:25385) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTAATGTGTTTTACATACTTA - GTCTCTGATGAGGGTGGAAGG) on contig 25 (1290536 nt) Astart:990149 Aend:990128 Bstart:975615 Bend:975636 CALCULATED DISTANCE APART: 14534 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -621133 <- tig#r.66, A=2766197 nt (start:2129423, end:2129444) B=201913 nt (start:197554, end:197575) CALCULATED DISTANCE APART: -621133 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CAGGTAATGACACCAAAAATT - ATAATAAGTAAGTTGAACGAT) on contig 15 (3712591 nt) Astart:1717158 Aend:1717179 Bstart:1730860 Bend:1730881 Pairs unsatisfied in pairing logic within a contig. Pair (CAATCTCCGATGATCGCTCCA - CCAGAGAATTTAAGGCAATGT) on contig 15 (3712591 nt) Astart:1792311 Aend:1792290 Bstart:2056367 Bend:2056388 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -621133 <- tig#r.66, A=2766197 nt (start:2129238, end:2129259) B=201913 nt (start:197739, end:197760) CALCULATED DISTANCE APART: -621133 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TAACTTCTTTTTGATTGTTAA - TGCAATACAAGTCAAATATCT) on contig 19 (3531543 nt) Astart:3058938 Aend:3058917 Bstart:3049782 Bend:3049761 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#39 -> -2984839 <- tig#12, B=736718 nt (start:457328, end:457349) A=2766197 nt (start:2725449, end:2725428) CALCULATED DISTANCE APART: -2984839 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#12 -> -245458 <- tig#56, A=2766197 nt (start:2696528, end:2696549) B=262460 nt (start:195789, end:195768) CALCULATED DISTANCE APART: -245458 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16825, end:16804) A=1227811 nt (start:6990, end:6969) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#40 -> -2348094 <- tig#7, B=668174 nt (start:554952, end:554973) A=3534247 nt (start:2254872, end:2254851) CALCULATED DISTANCE APART: -2348094 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135698, end:135719) B=15068 nt (start:1978, end:1999) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260602, end:2260623) B=356404 nt (start:342622, end:342643) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728188, end:728209) A=1096 nt (start:273, end:252) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#133 -> -6566395 <- tig#6, A=34073 nt (start:1402, end:1423) B=6870868 nt (start:6553724, end:6553703) CALCULATED DISTANCE APART: -6566395 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATGTAATCGTGTCACTGAAAG - CTGAGAATATCTGAAACTCTC) on contig 34 (1705564 nt) Astart:679584 Aend:679563 Bstart:664621 Bend:664642 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -4201 <- tig#r.96, A=262460 nt (start:244491, end:244512) B=91302 nt (start:85070, end:85091) CALCULATED DISTANCE APART: -4201 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459159, end:459138) A=1345436 nt (start:26501, end:26480) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:134523, end:134544) B=15068 nt (start:3153, end:3174) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ACAGTAGATCCATAAGTCAAG - CAATAATTTTCACCAGCTCGG) on contig 19 (3531543 nt) Astart:3059456 Aend:3059435 Bstart:3049267 Bend:3049246 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#51 -> -548580 <- tig#79, B=875428 nt (start:390801, end:390822) A=136600 nt (start:83953, end:83932) CALCULATED DISTANCE APART: -548580 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.46 -> -38916 <- tig#210, B=577887 nt (start:57576, end:57555) A=5560 nt (start:1340, end:1319) CALCULATED DISTANCE APART: -38916 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#129 -> -19665 <- tig#520, A=39603 nt (start:459, end:480) B=1101 nt (start:521, end:500) CALCULATED DISTANCE APART: -19665 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#53 -> -314812 <- tig#75, B=354284 nt (start:24854, end:24875) A=373953 nt (start:5382, end:5361) CALCULATED DISTANCE APART: -314812 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -1247555 <- tig#r.29, A=2650694 nt (start:2507853, end:2507874) B=1463708 nt (start:338994, end:339015) CALCULATED DISTANCE APART: -1247555 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#127 -> -57440 <- tig#17, B=80830 nt (start:62980, end:63001) A=1959065 nt (start:59590, end:59569) CALCULATED DISTANCE APART: -57440 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -621133 <- tig#r.66, A=2766197 nt (start:2129688, end:2129709) B=201913 nt (start:197289, end:197310) CALCULATED DISTANCE APART: -621133 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#120 -> -1341554 <- tig#29, B=44710 nt (start:43887, end:43908) A=1463708 nt (start:1360731, end:1360710) CALCULATED DISTANCE APART: -1341554 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.29 -> -1609386 <- tig#35, B=1463708 nt (start:953944, end:953923) A=1135475 nt (start:675442, end:675421) CALCULATED DISTANCE APART: -1609386 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33579, end:33558) A=855454 nt (start:18870, end:18849) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig. Pair (GGAAAGACATTTTCTTAAGTG - AGGATGGAGGCATTGGTTAGT) on contig 30 (1050452 nt) Astart:648514 Aend:648535 Bstart:673548 Bend:673527 CALCULATED DISTANCE APART: 25034 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459919, end:459898) A=1345436 nt (start:25741, end:25720) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.38 -> -1310006 <- tig#33, B=1143067 nt (start:1039254, end:1039233) A=1290487 nt (start:290752, end:290731) CALCULATED DISTANCE APART: -1310006 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#7 -> -2322212 <- tig#r.38, A=3534247 nt (start:1958325, end:1958346) B=1143067 nt (start:376777, end:376798) CALCULATED DISTANCE APART: -2322212 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#12 -> -245456 <- tig#56, B=2766197 nt (start:2696556, end:2696577) A=262460 nt (start:195815, end:195794) CALCULATED DISTANCE APART: -245456 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTCAAAAGACTCAACCTTTTC - GTCCTTCTATATACCTACGTT) on contig 5 (3689108 nt) Astart:1178447 Aend:1178426 Bstart:1163313 Bend:1163334 CALCULATED DISTANCE APART: 15134 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259312, end:2259333) B=356404 nt (start:343912, end:343933) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16655, end:16634) A=1227811 nt (start:7160, end:7139) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#10 -> -2984380 <- tig#23, A=3047199 nt (start:1346455, end:1346476) B=1345436 nt (start:1303636, end:1303615) CALCULATED DISTANCE APART: -2984380 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728018, end:728039) A=1096 nt (start:103, end:82) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig. Pair (CCAAAGCTGTTTTCATTCATA - AATGTCGACCTATCGTAGTAT) on contig 5 (3689108 nt) Astart:1169312 Aend:1169333 Bstart:1184447 Bend:1184426 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459774, end:459753) A=1345436 nt (start:25886, end:25865) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:458964, end:458943) A=1345436 nt (start:26696, end:26675) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GCTATCTCACTGATGTCATCT - GATATGATTGTAGTAAGCAAC) on contig 7 (3534247 nt) Astart:2255067 Aend:2255046 Bstart:2239707 Bend:2239686 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460259, end:460238) A=1345436 nt (start:25401, end:25380) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082482, end:2082503) B=976128 nt (start:961040, end:961061) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730642, end:730663) B=3531543 nt (start:3200216, end:3200195) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTAAAGAAGCACAAAAATAAA - AAGAATTTATGGTACTAATTG) on contig 6 (6870868 nt) Astart:1137899 Aend:1137878 Bstart:1129472 Bend:1129493 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#56 -> -532300 <- tig#5, B=262460 nt (start:70360, end:70381) A=3689108 nt (start:360200, end:360179) CALCULATED DISTANCE APART: -532300 < -2000 Pairs unsatisfied in distance within a contig. Pair (CAGCTAATAGATTTGTATGAG - CAAGTCATTATCTGATAAACT) on contig 27 (1227811 nt) Astart:434670 Aend:434691 Bstart:450923 Bend:450902 CALCULATED DISTANCE APART: 16253 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -3661475 <- tig#r.3, A=262460 nt (start:68599, end:68620) B=3889482 nt (start:401868, end:401889) CALCULATED DISTANCE APART: -3661475 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#86 -> -1157724 <- tig#r.5, A=280231 nt (start:170135, end:170156) B=3689108 nt (start:2621480, end:2621501) CALCULATED DISTANCE APART: -1157724 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TCAGACAGAGAATGTTTTTGG - ATGAAATTGCGCAAGAAATTT) on contig 19 (3531543 nt) Astart:3058063 Aend:3058042 Bstart:3050657 Bend:3050636 Pairs unsatisfied in distance within a contig. Pair (ACAACTGTCTCAACAGTGTCG - TTCTGCAGCTGGAGGAATAGC) on contig 41 (667251 nt) Astart:88363 Aend:88342 Bstart:75683 Bend:75704 CALCULATED DISTANCE APART: 12680 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#9 -> -6907531 <- tig#r.5, A=3747885 nt (start:149279, end:149300) B=3689108 nt (start:360183, end:360204) CALCULATED DISTANCE APART: -6907531 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#9 -> -6907534 <- tig#r.5, A=3747885 nt (start:149279, end:149300) B=3689108 nt (start:360180, end:360201) CALCULATED DISTANCE APART: -6907534 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#9 -> -6907529 <- tig#r.5, A=3747885 nt (start:149279, end:149300) B=3689108 nt (start:360185, end:360206) CALCULATED DISTANCE APART: -6907529 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#35 -> -7558830 <- tig#6, A=1135475 nt (start:212245, end:212266) B=6870868 nt (start:6655600, end:6655579) CALCULATED DISTANCE APART: -7558830 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#1 -> -4220727 <- tig#r.10, A=4853111 nt (start:1841099, end:1841120) B=3047199 nt (start:1818484, end:1818505) CALCULATED DISTANCE APART: -4220727 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTGTGGAACTTTTTTTGTGAT - ATTGGTAAAACCACTCTGGCT) on contig 37 (853709 nt) Astart:538972 Aend:538993 Bstart:551642 Bend:551621 CALCULATED DISTANCE APART: 12670 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#106 -> -176217 <- tig#90, B=117163 nt (start:27801, end:27822) A=112304 nt (start:106855, end:106834) CALCULATED DISTANCE APART: -176217 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#3 -> -3618470 <- tig#27, B=3889482 nt (start:316524, end:316545) A=1227811 nt (start:65512, end:65491) CALCULATED DISTANCE APART: -3618470 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#118 -> -33564 <- tig#97, B=66247 nt (start:38047, end:38068) A=91050 nt (start:25364, end:25343) CALCULATED DISTANCE APART: -33564 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#74 -> -258227 <- tig#56, B=238371 nt (start:59091, end:59112) A=262460 nt (start:98947, end:98926) CALCULATED DISTANCE APART: -258227 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#49 -> -426974 <- tig#95, B=399963 nt (start:45569, end:45590) A=92653 nt (start:92580, end:92559) CALCULATED DISTANCE APART: -426974 < -2000 Pairs unsatisfied in distance within a contig. Pair (GGTCGAGGATTTGTCGACCAG - AAATCCTCGACCACTCCTCGT) on contig 95 (92653 nt) Astart:92580 Aend:92559 Bstart:92383 Bend:92404 CALCULATED DISTANCE APART: 197 Pairs unsatisfied in distance within a contig. Pair (TGCTGAGAAAAAACTAGAGAG - TCTCCAGTCACCCATCTCCCA) on contig 27 (1227811 nt) Astart:434775 Aend:434796 Bstart:451028 Bend:451007 CALCULATED DISTANCE APART: 16253 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#12 -> -2816174 <- tig#43, B=2766197 nt (start:264779, end:264800) A=1235946 nt (start:334756, end:334735) CALCULATED DISTANCE APART: -2816174 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12396, end:12375) A=91302 nt (start:11797, end:11776) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#6 -> -25592 <- tig#56, A=6870868 nt (start:6843008, end:6843029) B=262460 nt (start:17732, end:17711) CALCULATED DISTANCE APART: -25592 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#84 -> -306083 <- tig#53, A=197079 nt (start:196801, end:196822) B=354284 nt (start:325805, end:325784) CALCULATED DISTANCE APART: -306083 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -322558 <- tig#r.572, A=2650694 nt (start:2308790, end:2308811) B=1031 nt (start:377, end:398) CALCULATED DISTANCE APART: -322558 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.328 -> -54701 <- tig#102, B=1508 nt (start:1236, end:1215) A=83426 nt (start:73465, end:73444) CALCULATED DISTANCE APART: -54701 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATTTATGTTTTAAAAGTGATC - CAAAAAGAATTTGAGCGAAGC) on contig 34 (1705564 nt) Astart:679904 Aend:679883 Bstart:664941 Bend:664962 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig. Pair (TCCGGTATGAGGTGCTACGGA - CTACAAAATTGAAAACAGATT) on contig 123 (42452 nt) Astart:4850 Aend:4871 Bstart:9124 Bend:9103 CALCULATED DISTANCE APART: 4274 Pairs unsatisfied in pairing logic within a contig. Pair (AAAGAAACTCTCACATTCTCA - TCGTTTCCACTCTTGGTTGTT) on contig 15 (3712591 nt) Astart:1716533 Aend:1716554 Bstart:1731485 Bend:1731506 Pairs unsatisfied in pairing logic within a contig. Pair (TAAGAAATAAAAATAAATATA - CCACTCGTCTAGCTTGACTGG) on contig 7 (3534247 nt) Astart:725283 Aend:725304 Bstart:730878 Bend:730899 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.403 -> -2330792 <- tig#13, B=1321 nt (start:395, end:374) A=2650694 nt (start:2350397, end:2350376) CALCULATED DISTANCE APART: -2330792 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16225, end:16204) A=1227811 nt (start:7590, end:7569) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#119 -> -7707 <- tig#r.49, A=46878 nt (start:31775, end:31796) B=399963 nt (start:387359, end:387380) CALCULATED DISTANCE APART: -7707 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCAATTATTTTGCAATTCTTC - AAAATCATAAAATTACCAATA) on contig 71 (271268 nt) Astart:123895 Aend:123874 Bstart:118521 Bend:118542 CALCULATED DISTANCE APART: 5374 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.143 -> -106916 <- tig#80, B=24293 nt (start:3261, end:3240) A=191116 nt (start:123655, end:123634) CALCULATED DISTANCE APART: -106916 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#67 -> -23669 <- tig#134, B=197815 nt (start:180270, end:180291) A=33262 nt (start:26124, end:26103) CALCULATED DISTANCE APART: -23669 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460984, end:460963) A=1345436 nt (start:24676, end:24655) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728823, end:728844) A=1096 nt (start:908, end:887) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GAGAAATGCCCCAAACACTAT - TTCACGTTAATATATGCCGTG) on contig 19 (3531543 nt) Astart:3058988 Aend:3058967 Bstart:3049732 Bend:3049711 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460959, end:460938) A=1345436 nt (start:24701, end:24680) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#76 -> -676617 <- tig#r.32, A=322881 nt (start:71861, end:71882) B=972151 nt (start:526554, end:526575) CALCULATED DISTANCE APART: -676617 < -2000 Pairs unsatisfied in distance within a contig. Pair (GCATGTTTTACTCTGGATAAT - TTGGGCCTTGAAACTCCGATT) on contig 30 (1050452 nt) Astart:648489 Aend:648510 Bstart:673523 Bend:673502 CALCULATED DISTANCE APART: 25034 Pairs unsatisfied in distance within a contig. Pair (CTCTAGGTGTTAGTTTTTTTG - TCCCTTTTTGGAAGGATGTCA) on contig 6 (6870868 nt) Astart:1138419 Aend:1138398 Bstart:1129992 Bend:1130013 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in pairing logic within a contig. Pair (ACATACATATAGACAGTAATC - GCAGACCGGACCACGAAGTGA) on contig 19 (3531543 nt) Astart:3058478 Aend:3058457 Bstart:3050242 Bend:3050221 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#15 -> -3774506 <- tig#4, B=3712591 nt (start:1741004, end:1741025) A=3837743 nt (start:1822919, end:1822898) CALCULATED DISTANCE APART: -3774506 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.46 -> -633076 <- tig#11, B=577887 nt (start:505878, end:505857) A=4628067 nt (start:147198, end:147177) CALCULATED DISTANCE APART: -633076 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.328 -> -54701 <- tig#102, B=1508 nt (start:1241, end:1220) A=83426 nt (start:73460, end:73439) CALCULATED DISTANCE APART: -54701 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219516, end:4219495) A=2598 nt (start:2105, end:2084) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#9 -> -3369808 <- tig#22, A=3747885 nt (start:358123, end:358144) B=1636463 nt (start:46, end:25) CALCULATED DISTANCE APART: -3369808 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.38 -> -1310113 <- tig#33, B=1143067 nt (start:1039544, end:1039523) A=1290487 nt (start:290569, end:290548) CALCULATED DISTANCE APART: -1310113 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#98 -> -8012 <- tig#161, B=88184 nt (start:68304, end:68325) A=15506 nt (start:8132, end:8111) CALCULATED DISTANCE APART: -8012 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2135, end:2156) A=258385 nt (start:671, end:650) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#33 -> -492044 <- tig#32, A=1290487 nt (start:1236012, end:1236033) B=972151 nt (start:457569, end:457548) CALCULATED DISTANCE APART: -492044 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGCCACTATACTCGGTGGAAG - CCTAACTTTCTTAAAACGTTT) on contig 30 (1050452 nt) Astart:650584 Aend:650605 Bstart:666350 Bend:666329 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.328 -> -54701 <- tig#102, B=1508 nt (start:1166, end:1145) A=83426 nt (start:73535, end:73514) CALCULATED DISTANCE APART: -54701 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3582 <- tig#26, B=1171658 nt (start:1170979, end:1171000) A=1332708 nt (start:22903, end:22882) CALCULATED DISTANCE APART: -3582 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#103 -> -216461 <- tig#48, A=211876 nt (start:14459, end:14480) B=487359 nt (start:39044, end:39023) CALCULATED DISTANCE APART: -216461 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCATTCTTCTACTTATCATCC - CTCTTGGGATCTTTAACAGCT) on contig 1 (4853111 nt) Astart:346280 Aend:346301 Bstart:391557 Bend:391536 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#120 -> -1341554 <- tig#29, B=44710 nt (start:43192, end:43213) A=1463708 nt (start:1360036, end:1360015) CALCULATED DISTANCE APART: -1341554 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#185 -> -12926 <- tig#r.53, A=9655 nt (start:5236, end:5257) B=354284 nt (start:325777, end:325798) CALCULATED DISTANCE APART: -12926 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#265 -> -3126344 <- tig#4, A=1946 nt (start:1846, end:1867) B=3837743 nt (start:3146244, end:3146223) CALCULATED DISTANCE APART: -3126344 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -55857 <- tig#165, B=5014909 nt (start:73526, end:73505) A=13843 nt (start:2331, end:2310) CALCULATED DISTANCE APART: -55857 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.257 -> -2902765 <- tig#8, B=1995 nt (start:1751, end:1730) A=5070776 nt (start:2921014, end:2920993) CALCULATED DISTANCE APART: -2902765 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#52 -> -356009 <- tig#3, B=356404 nt (start:102, end:123) A=3889482 nt (start:19707, end:19686) CALCULATED DISTANCE APART: -356009 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#126 -> -11249 <- tig#167, B=40796 nt (start:10008, end:10029) A=25236 nt (start:461, end:440) CALCULATED DISTANCE APART: -11249 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282927, end:282948) B=2196 nt (start:1108, end:1087) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TCAAAGGAGTCATTCGTTTTT - TCCATCGCATCTCATACATGT) on contig 19 (3531543 nt) Astart:3060061 Aend:3060040 Bstart:3048662 Bend:3048641 Pairs unsatisfied in pairing logic within a contig. Pair (AACGAATCACACCAAAGATTA - TCTTTGTTTCCAAATTCAAGT) on contig 15 (3712591 nt) Astart:1791989 Aend:1791968 Bstart:2056052 Bend:2056073 Pairs unsatisfied in pairing logic within a contig. Pair (AAAAGGGATATTTTGAAGTAA - TCAAATTTATAGAAAAATGTG) on contig 19 (3531543 nt) Astart:3059351 Aend:3059330 Bstart:3049372 Bend:3049351 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -214292 <- tig#6, A=354284 nt (start:133740, end:133761) B=6870868 nt (start:13748, end:13727) CALCULATED DISTANCE APART: -214292 < -2000 Pairs unsatisfied in distance within a contig. Pair (TATTTTGAAACTTAGGTGCAT - TTATTGCCTAGGCCAATCAAG) on contig 37 (853709 nt) Astart:838709 Aend:838688 Bstart:823204 Bend:823225 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in distance within a contig. Pair (TCAATCAATAAACAAGATCAG - ACGACTTGAGGCAAGTTGAAG) on contig 6 (6870868 nt) Astart:1138609 Aend:1138588 Bstart:1130154 Bend:1130175 CALCULATED DISTANCE APART: 8455 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082592, end:2082613) B=976128 nt (start:960930, end:960951) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.48 -> -3108447 <- tig#12, B=487359 nt (start:404713, end:404692) A=2766197 nt (start:2723734, end:2723713) CALCULATED DISTANCE APART: -3108447 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#79 -> -2152 <- tig#r.186, A=136600 nt (start:115451, end:115472) B=8794 nt (start:7791, end:7812) CALCULATED DISTANCE APART: -2152 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2250, end:2271) A=258385 nt (start:786, end:765) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTTCTACTTATCATCCTTACC - ATACTCTCTTGGGATCTTTAA) on contig 1 (4853111 nt) Astart:346285 Aend:346306 Bstart:391562 Bend:391541 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in pairing logic within a contig. Pair (AGCCATGCAGTTCCGTAAACT - TGTTATATTATAACATAAACT) on contig 15 (3712591 nt) Astart:1717098 Aend:1717119 Bstart:1730920 Bend:1730941 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#207 -> -1387873 <- tig#19, B=5890 nt (start:439, end:460) A=3531543 nt (start:1402422, end:1402401) CALCULATED DISTANCE APART: -1387873 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33929, end:33908) A=855454 nt (start:18520, end:18499) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -621133 <- tig#r.66, A=2766197 nt (start:2129243, end:2129264) B=201913 nt (start:197734, end:197755) CALCULATED DISTANCE APART: -621133 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730407, end:730428) B=3531543 nt (start:3199981, end:3199960) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#34 -> -1107781 <- tig#79, A=1705564 nt (start:662211, end:662232) B=136600 nt (start:84428, end:84407) CALCULATED DISTANCE APART: -1107781 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#305 -> -2202335 <- tig#r.19, A=1638 nt (start:262, end:283) B=3531543 nt (start:1310584, end:1310605) CALCULATED DISTANCE APART: -2202335 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#120 -> -1341554 <- tig#29, B=44710 nt (start:43947, end:43968) A=1463708 nt (start:1360791, end:1360770) CALCULATED DISTANCE APART: -1341554 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#81 -> -2917495 <- tig#r.7, A=258617 nt (start:240729, end:240750) B=3534247 nt (start:614640, end:614661) CALCULATED DISTANCE APART: -2917495 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:134918, end:134939) B=15068 nt (start:2758, end:2779) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#48 -> -3151847 <- tig#12, B=487359 nt (start:40501, end:40522) A=2766197 nt (start:2724989, end:2724968) CALCULATED DISTANCE APART: -3151847 < -2000 Pairs unsatisfied in distance within a contig. Pair (GATGAATGGGCGATGAAAATC - CATTCATCGTCCTGGTCGAGG) on contig 95 (92653 nt) Astart:92494 Aend:92473 Bstart:92301 Bend:92322 CALCULATED DISTANCE APART: 193 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:458974, end:458953) A=1345436 nt (start:26686, end:26665) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.1 -> -4590186 <- tig#16, B=4853111 nt (start:3207807, end:3207786) A=2098954 nt (start:1402379, end:1402358) CALCULATED DISTANCE APART: -4590186 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CTTCGTGGTTATTTACAAAGT - ATAAATTCAAAATTGTCCGCA) on contig 15 (3712591 nt) Astart:1718863 Aend:1718884 Bstart:1729155 Bend:1729176 Pairs unsatisfied in distance within a contig. Pair (TGCTCCTGGTGGACCCAATGG - CCAATTCATGTAATTAAGATC) on contig 1 (4853111 nt) Astart:345920 Aend:345941 Bstart:391197 Bend:391176 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136608, end:136629) B=15068 nt (start:1068, end:1089) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082752, end:2082773) B=976128 nt (start:960770, end:960791) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260747, end:2260768) B=356404 nt (start:342477, end:342498) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGTGAAGGCGCGTGCACTTCA - AGTTGCACCTGTAGCAGCAAG) on contig 15 (3712591 nt) Astart:1718353 Aend:1718374 Bstart:1729665 Bend:1729686 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219306, end:4219285) A=2598 nt (start:2315, end:2294) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#64 -> -5182473 <- tig#6, A=211265 nt (start:62203, end:62224) B=6870868 nt (start:5053411, end:5053390) CALCULATED DISTANCE APART: -5182473 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:729952, end:729973) B=3531543 nt (start:3199526, end:3199505) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#57 -> -246884 <- tig#r.177, A=258385 nt (start:1910, end:1931) B=11085 nt (start:676, end:697) CALCULATED DISTANCE APART: -246884 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -4201 <- tig#r.96, A=262460 nt (start:244431, end:244452) B=91302 nt (start:85130, end:85151) CALCULATED DISTANCE APART: -4201 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#35 -> -1137087 <- tig#75, A=1135475 nt (start:222772, end:222793) B=373953 nt (start:244384, end:244363) CALCULATED DISTANCE APART: -1137087 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#38 -> -1110027 <- tig#78, B=1143067 nt (start:143096, end:143117) A=184063 nt (start:130056, end:130035) CALCULATED DISTANCE APART: -1110027 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2540, end:2561) A=258385 nt (start:1076, end:1055) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -1335763 <- tig#4, B=3747885 nt (start:2857607, end:2857628) A=3837743 nt (start:465485, end:465464) CALCULATED DISTANCE APART: -1335763 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -322558 <- tig#r.572, A=2650694 nt (start:2308795, end:2308816) B=1031 nt (start:372, end:393) CALCULATED DISTANCE APART: -322558 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#22 -> -1615678 <- tig#20, B=1636463 nt (start:11006, end:11027) A=2328057 nt (start:10221, end:10200) CALCULATED DISTANCE APART: -1615678 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#52 -> -353986 <- tig#1, B=356404 nt (start:24, end:45) A=4853111 nt (start:17606, end:17585) CALCULATED DISTANCE APART: -353986 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGGTTATGGGTTTGTGGCTAA - CAACAATATACAACACTGATT) on contig 60 (232804 nt) Astart:31242 Aend:31263 Bstart:57520 Bend:57499 CALCULATED DISTANCE APART: 26278 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#54 -> -328166 <- tig#r.53, A=625914 nt (start:323642, end:323663) B=354284 nt (start:308390, end:308411) CALCULATED DISTANCE APART: -328166 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16865, end:16844) A=1227811 nt (start:6950, end:6929) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730372, end:730393) B=3531543 nt (start:3199946, end:3199925) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.6 -> -5416206 <- tig#35, B=6870868 nt (start:4671645, end:4671624) A=1135475 nt (start:764561, end:764540) CALCULATED DISTANCE APART: -5416206 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTTTGACTCGTGTGTTGTGGA - ATTCCCTAGGAGAGATGAAAC) on contig 37 (853709 nt) Astart:538427 Aend:538448 Bstart:551100 Bend:551079 CALCULATED DISTANCE APART: 12673 Pairs unsatisfied in pairing logic within a contig. Pair (CAAACCCAAACTACAGAGCAT - TGTGTGAATCCAACAAAAATC) on contig 19 (3531543 nt) Astart:3060296 Aend:3060275 Bstart:3048427 Bend:3048406 Pairs unsatisfied in pairing logic within a contig. Pair (ATATGCAGGAGTTGATGTACG - TGTTCTGATTACTAGATTATA) on contig 14 (2271162 nt) Astart:658326 Aend:658305 Bstart:495585 Bend:495564 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.53 -> -305962 <- tig#131, B=354284 nt (start:325801, end:325780) A=36503 nt (start:161, end:140) CALCULATED DISTANCE APART: -305962 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#11 -> -5013150 <- tig#30, A=4628067 nt (start:267057, end:267078) B=1050452 nt (start:672140, end:672119) CALCULATED DISTANCE APART: -5013150 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.5 -> -1844442 <- tig#11, B=3689108 nt (start:1493106, end:1493085) A=4628067 nt (start:371336, end:371315) CALCULATED DISTANCE APART: -1844442 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTGTCTTCATACATAGTTCAT - TTGGATAAATTCTGACTTCGA) on contig 37 (853709 nt) Astart:670100 Aend:670079 Bstart:655838 Bend:655859 CALCULATED DISTANCE APART: 14262 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460989, end:460968) A=1345436 nt (start:24671, end:24650) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#9 -> -3469176 <- tig#58, A=3747885 nt (start:435718, end:435739) B=374416 nt (start:177009, end:176988) CALCULATED DISTANCE APART: -3469176 < -2000 Pairs unsatisfied in distance within a contig. Pair (CGTCAAATCTCTAGATCTTGT - ACTAATTTACATGTATATATT) on contig 37 (853709 nt) Astart:538342 Aend:538363 Bstart:551011 Bend:550990 CALCULATED DISTANCE APART: 12669 Pairs unsatisfied in pairing logic within a contig. Pair (CACCAGACGTAGGTAACTCGG - TCAATAATGCTCAATTTCAAG) on contig 15 (3712591 nt) Astart:1716938 Aend:1716959 Bstart:1731080 Bend:1731101 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.167 -> -1669514 <- tig#34, B=25236 nt (start:10210, end:10189) A=1705564 nt (start:1679304, end:1679283) CALCULATED DISTANCE APART: -1669514 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#84 -> -1659583 <- tig#34, B=197079 nt (start:196800, end:196821) A=1705564 nt (start:1679304, end:1679283) CALCULATED DISTANCE APART: -1659583 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#4 -> -3798685 <- tig#16, B=3837743 nt (start:350895, end:350916) A=2098954 nt (start:331837, end:331816) CALCULATED DISTANCE APART: -3798685 < -2000 Pairs unsatisfied in distance within a contig. Pair (ACAAGAACAGAGTGCTCTGCT - GGTTTTGGCGTATTGGTTATC) on contig 6 (6870868 nt) Astart:1138304 Aend:1138283 Bstart:1129877 Bend:1129898 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig. Pair (GATCTTATGAGTTTTTGGTCT - TCGTTGTGCGGACAGTCCAAA) on contig 174 (11297 nt) Astart:10438 Aend:10417 Bstart:5631 Bend:5652 CALCULATED DISTANCE APART: 4807 Pairs unsatisfied in pairing logic within a contig. Pair (TTTTGTGTTAGGTTTTATCTG - TATCGTTCTCGTACGTAGATC) on contig 19 (3531543 nt) Astart:3058798 Aend:3058777 Bstart:3049922 Bend:3049901 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#118 -> -33564 <- tig#97, B=66247 nt (start:38122, end:38143) A=91050 nt (start:25439, end:25418) CALCULATED DISTANCE APART: -33564 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGACGATCATGTAGTCAGTAA - CCGAGCTCTGCTACGTCTCTG) on contig 41 (667251 nt) Astart:88498 Aend:88477 Bstart:75818 Bend:75839 CALCULATED DISTANCE APART: 12680 Pairs unsatisfied in pairing logic within a contig. Pair (GTGAATGAGCCACAAGATGAA - ATATATTTATTTTGTTTTTTC) on contig 19 (3531543 nt) Astart:3059018 Aend:3058997 Bstart:3049702 Bend:3049681 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#12 -> -245458 <- tig#56, A=2766197 nt (start:2696543, end:2696564) B=262460 nt (start:195804, end:195783) CALCULATED DISTANCE APART: -245458 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#139 -> -6248 <- tig#57, A=27696 nt (start:8764, end:8785) B=258385 nt (start:7316, end:7295) CALCULATED DISTANCE APART: -6248 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTTACTTCTCTCTACAATTTC - TAGGATAATATATCATGAGAA) on contig 71 (271268 nt) Astart:123875 Aend:123854 Bstart:118501 Bend:118522 CALCULATED DISTANCE APART: 5374 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17425, end:17404) A=1227811 nt (start:6390, end:6369) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#27 -> -2275219 <- tig#14, A=1227811 nt (start:935711, end:935732) B=2271162 nt (start:2003119, end:2003098) CALCULATED DISTANCE APART: -2275219 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259427, end:2259448) B=356404 nt (start:343797, end:343818) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16255, end:16234) A=1227811 nt (start:7560, end:7539) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig. Pair (ACTGCATTCTTTGTGGAACTT - CCACTCTGGCTAGACAAGTCT) on contig 37 (853709 nt) Astart:538962 Aend:538983 Bstart:551632 Bend:551611 CALCULATED DISTANCE APART: 12670 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#173 -> -6636294 <- tig#6, A=11377 nt (start:10443, end:10464) B=6870868 nt (start:6655360, end:6655339) CALCULATED DISTANCE APART: -6636294 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082662, end:2082683) B=976128 nt (start:960860, end:960881) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.17 -> -1813129 <- tig#74, B=1959065 nt (start:1774056, end:1774035) A=238371 nt (start:59073, end:59052) CALCULATED DISTANCE APART: -1813129 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#75 -> -1731933 <- tig#19, A=373953 nt (start:275495, end:275516) B=3531543 nt (start:1653475, end:1653454) CALCULATED DISTANCE APART: -1731933 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259802, end:2259823) B=356404 nt (start:343422, end:343443) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GAAAAACCAGTCATCATAAAC - GACAAACTTTGAAAGAAAGTA) on contig 4 (3837743 nt) Astart:2358391 Aend:2358412 Bstart:2359671 Bend:2359692 Pairs unsatisfied in pairing logic within a contig. Pair (TTCAGCAACAGCCACCGGCCT - AACTTCCACACTTGTTTTTAA) on contig 19 (3531543 nt) Astart:3060181 Aend:3060160 Bstart:3048542 Bend:3048521 Pairs unsatisfied in pairing logic within a contig. Pair (GCAGGTAAGGCTTTTTTTTTC - ATGAAATTCAATGTTTATGTG) on contig 15 (3712591 nt) Astart:1717343 Aend:1717364 Bstart:1730675 Bend:1730696 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#119 -> -7707 <- tig#r.49, A=46878 nt (start:31860, end:31881) B=399963 nt (start:387274, end:387295) CALCULATED DISTANCE APART: -7707 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#31 -> -496426 <- tig#41, B=976128 nt (start:946430, end:946451) A=667251 nt (start:486728, end:486707) CALCULATED DISTANCE APART: -496426 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282762, end:282783) B=2196 nt (start:943, end:922) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.42 -> -1433157 <- tig#20, B=659641 nt (start:2303, end:2282) A=2328057 nt (start:1450854, end:1450833) CALCULATED DISTANCE APART: -1433157 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTGGAAAAGAAGCTCAGGTTC - CAAAGATGCAATAAAGAGATG) on contig 1 (4853111 nt) Astart:346930 Aend:346951 Bstart:392207 Bend:392186 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#48 -> -3151835 <- tig#12, B=487359 nt (start:39488, end:39509) A=2766197 nt (start:2723964, end:2723943) CALCULATED DISTANCE APART: -3151835 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.16 -> -2023999 <- tig#291, B=2098954 nt (start:2043649, end:2043628) A=1714 nt (start:350, end:329) CALCULATED DISTANCE APART: -2023999 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.16 -> -2023988 <- tig#291, B=2098954 nt (start:2043638, end:2043617) A=1714 nt (start:350, end:329) CALCULATED DISTANCE APART: -2023988 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#9 -> -2729016 <- tig#69, A=3747885 nt (start:1134473, end:1134494) B=186132 nt (start:135604, end:135583) CALCULATED DISTANCE APART: -2729016 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.54 -> -242538 <- tig#53, B=625914 nt (start:93232, end:93211) A=354284 nt (start:169306, end:169285) CALCULATED DISTANCE APART: -242538 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:283042, end:283063) B=2196 nt (start:1223, end:1202) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#118 -> -33564 <- tig#97, B=66247 nt (start:37962, end:37983) A=91050 nt (start:25279, end:25258) CALCULATED DISTANCE APART: -33564 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219251, end:4219230) A=2598 nt (start:2370, end:2349) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -2169736 <- tig#r.19, A=2650694 nt (start:2309485, end:2309506) B=3531543 nt (start:1683016, end:1683037) CALCULATED DISTANCE APART: -2169736 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGCCATTCACATTGACAGAGA - AAAAACCTTAAAACTTGGGAA) on contig 30 (1050452 nt) Astart:649464 Aend:649485 Bstart:665230 Bend:665209 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in distance within a contig. Pair (CATTGCCACACTCCTCTGTAC - CTTTGGTGATTCTTCGGTTGT) on contig 1 (4853111 nt) Astart:346315 Aend:346336 Bstart:391592 Bend:391571 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728038, end:728059) A=1096 nt (start:123, end:102) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#34 -> -3900848 <- tig#r.11, A=1705564 nt (start:54552, end:54573) B=4628067 nt (start:2358231, end:2358252) CALCULATED DISTANCE APART: -3900848 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GGTATCCGATTTCGCCTAGGG - TAGACCTAAACTCTATTATTA) on contig 15 (3712591 nt) Astart:1717248 Aend:1717269 Bstart:1730770 Bend:1730791 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.91 -> -51111 <- tig#31, B=101959 nt (start:16420, end:16399) A=976128 nt (start:54691, end:54670) CALCULATED DISTANCE APART: -51111 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.257 -> -2902765 <- tig#8, B=1995 nt (start:1911, end:1890) A=5070776 nt (start:2920854, end:2920833) CALCULATED DISTANCE APART: -2902765 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#433 -> -944078 <- tig#r.29, A=1238 nt (start:81, end:102) B=1463708 nt (start:500787, end:500808) CALCULATED DISTANCE APART: -944078 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.403 -> -2330792 <- tig#13, B=1321 nt (start:960, end:939) A=2650694 nt (start:2349832, end:2349811) CALCULATED DISTANCE APART: -2330792 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730647, end:730668) B=3531543 nt (start:3200221, end:3200200) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#118 -> -33564 <- tig#97, B=66247 nt (start:38217, end:38238) A=91050 nt (start:25534, end:25513) CALCULATED DISTANCE APART: -33564 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.31 -> -71287 <- tig#98, B=976128 nt (start:16360, end:16339) A=88184 nt (start:74927, end:74906) CALCULATED DISTANCE APART: -71287 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#9 -> -3443365 <- tig#93, A=3747885 nt (start:358573, end:358594) B=152036 nt (start:74053, end:74032) CALCULATED DISTANCE APART: -3443365 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460334, end:460313) A=1345436 nt (start:25326, end:25305) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2500, end:2521) A=258385 nt (start:1036, end:1015) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#5 -> -5542232 <- tig#7, B=3689108 nt (start:381173, end:381194) A=3534247 nt (start:2254297, end:2254276) CALCULATED DISTANCE APART: -5542232 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#102 -> -39033 <- tig#49, B=83426 nt (start:68278, end:68299) A=399963 nt (start:43885, end:43864) CALCULATED DISTANCE APART: -39033 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTGTTAACCATTGACTTTTGT - TAGATCTACGTTGTTCGACTG) on contig 19 (3531543 nt) Astart:3058813 Aend:3058792 Bstart:3049907 Bend:3049886 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -621133 <- tig#r.66, A=2766197 nt (start:2129413, end:2129434) B=201913 nt (start:197564, end:197585) CALCULATED DISTANCE APART: -621133 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.403 -> -2330792 <- tig#13, B=1321 nt (start:475, end:454) A=2650694 nt (start:2350317, end:2350296) CALCULATED DISTANCE APART: -2330792 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#119 -> -7707 <- tig#r.49, A=46878 nt (start:32045, end:32066) B=399963 nt (start:387089, end:387110) CALCULATED DISTANCE APART: -7707 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12281, end:12260) A=91302 nt (start:11912, end:11891) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ACCGCAGAAACCGAAGAAAGC - CACTTCTTCTTATGAGTTATG) on contig 15 (3712591 nt) Astart:1716693 Aend:1716714 Bstart:1731325 Bend:1731346 Pairs unsatisfied in distance within a contig. Pair (TTAGAGATTTGGATGAATTAG - TATAGTAACTTCTCATAAAAT) on contig 51 (875428 nt) Astart:52636 Aend:52657 Bstart:65678 Bend:65657 CALCULATED DISTANCE APART: 13042 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.101 -> -46827 <- tig#107, B=84691 nt (start:23979, end:23958) A=68734 nt (start:42848, end:42827) CALCULATED DISTANCE APART: -46827 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:283072, end:283093) B=2196 nt (start:1253, end:1232) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CATTGTGTTGCCTACCTTTGA - ATCGTCACCAACCCATGAATA) on contig 4 (3837743 nt) Astart:2357856 Aend:2357877 Bstart:2360206 Bend:2360227 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460109, end:460088) A=1345436 nt (start:25551, end:25530) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259747, end:2259768) B=356404 nt (start:343477, end:343498) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#92 -> -2121301 <- tig#16, A=101136 nt (start:3480, end:3501) B=2098954 nt (start:2043645, end:2043624) CALCULATED DISTANCE APART: -2121301 < -2000 Pairs unsatisfied in distance within a contig. Pair (CGGTTATCTCCGTGGAGAGGA - TAGCCTTCAGGACTAAAGAAA) on contig 37 (853709 nt) Astart:838999 Aend:838978 Bstart:823494 Bend:823515 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in pairing logic within a contig. Pair (CTCAAATTAATTAATTACGCT - GATCAATGGATTCGGTATAAC) on contig 15 (3712591 nt) Astart:1717398 Aend:1717419 Bstart:1730620 Bend:1730641 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#127 -> -717436 <- tig#r.33, A=80830 nt (start:20201, end:20222) B=1290487 nt (start:613680, end:613701) CALCULATED DISTANCE APART: -717436 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CTCAATCTCCATCGCCAATCT - CAATGTTTTCTTAATTAAGAC) on contig 15 (3712591 nt) Astart:1792326 Aend:1792305 Bstart:2056382 Bend:2056403 Pairs unsatisfied in pairing logic within a contig. Pair (CACAAAGAGTACGGTACTAAT - TACCAATATATATGTCTTTAT) on contig 14 (2271162 nt) Astart:658456 Aend:658435 Bstart:495455 Bend:495434 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#47 -> -293198 <- tig#6, A=471458 nt (start:172288, end:172309) B=6870868 nt (start:14028, end:14007) CALCULATED DISTANCE APART: -293198 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185709, end:4185688) A=3712591 nt (start:852, end:831) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#36 -> -60275 <- tig#86, A=855454 nt (start:790285, end:790306) B=280231 nt (start:15106, end:15085) CALCULATED DISTANCE APART: -60275 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATGTTGTTTCTTAGAGAGAAA - GCATTGTCAGTGGACACTCAA) on contig 19 (3531543 nt) Astart:3060016 Aend:3059995 Bstart:3048707 Bend:3048686 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#175 -> -2741574 <- tig#3, B=11120 nt (start:2749, end:2770) A=3889482 nt (start:2753203, end:2753182) CALCULATED DISTANCE APART: -2741574 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCCGCCGTAAATCAGTGGCTT - TCACCAACCACTACTACTTCA) on contig 1 (4853111 nt) Astart:346035 Aend:346056 Bstart:391312 Bend:391291 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig. Pair (AAGCACTACTAATTTTTCTTT - TCAATGATCTGATGTATACCT) on contig 2 (5014909 nt) Astart:1269751 Aend:1269772 Bstart:1284413 Bend:1284392 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#118 -> -33565 <- tig#97, B=66247 nt (start:54627, end:54648) A=91050 nt (start:41945, end:41924) CALCULATED DISTANCE APART: -33565 < -2000 Pairs unsatisfied in distance within a contig. Pair (TACAAGATTTTCATTTGAATC - AGCTAACAACACATTTCAGGT) on contig 2 (5014909 nt) Astart:1268541 Aend:1268562 Bstart:1283203 Bend:1283182 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219546, end:4219525) A=2598 nt (start:2075, end:2054) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260762, end:2260783) B=356404 nt (start:342462, end:342483) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ACTTCACCAAGTGATCCAGAA - TTTAGTTGGGTTTGTTTAAGA) on contig 7 (3534247 nt) Astart:2257257 Aend:2257236 Bstart:2237524 Bend:2237503 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#81 -> -2917594 <- tig#r.7, A=258617 nt (start:239760, end:239781) B=3534247 nt (start:615510, end:615531) CALCULATED DISTANCE APART: -2917594 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#1 -> -4220727 <- tig#r.10, A=4853111 nt (start:1841114, end:1841135) B=3047199 nt (start:1818469, end:1818490) CALCULATED DISTANCE APART: -4220727 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.167 -> -103487 <- tig#86, B=25236 nt (start:10214, end:10193) A=280231 nt (start:113273, end:113252) CALCULATED DISTANCE APART: -103487 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:458884, end:458863) A=1345436 nt (start:26776, end:26755) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460729, end:460708) A=1345436 nt (start:24931, end:24910) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730832, end:730853) B=3531543 nt (start:3200406, end:3200385) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16855, end:16834) A=1227811 nt (start:6960, end:6939) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#52 -> -356009 <- tig#3, B=356404 nt (start:97, end:118) A=3889482 nt (start:19702, end:19681) CALCULATED DISTANCE APART: -356009 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10173, end:10152) A=2766197 nt (start:2151390, end:2151369) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#7 -> -2355160 <- tig#r.32, A=3534247 nt (start:1604929, end:1604950) B=972151 nt (start:526309, end:526330) CALCULATED DISTANCE APART: -2355160 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTTAATTGGTGGTATACAAAC - ATGGCTTAGAGCAAAGTTGAA) on contig 19 (3531543 nt) Astart:3059706 Aend:3059685 Bstart:3049017 Bend:3048996 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.35 -> -676591 <- tig#2, B=1135475 nt (start:599415, end:599394) A=5014909 nt (start:97176, end:97155) CALCULATED DISTANCE APART: -676591 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -1443756 <- tig#r.4, A=2650694 nt (start:2066468, end:2066489) B=3837743 nt (start:2958213, end:2958234) CALCULATED DISTANCE APART: -1443756 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#37 -> -738300 <- tig#r.53, A=853709 nt (start:108294, end:108315) B=354284 nt (start:341399, end:341420) CALCULATED DISTANCE APART: -738300 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGTTATATAGTGTTGTCAAAA - GCCAAGATTGTCAGAGATTAT) on contig 15 (3712591 nt) Astart:1719398 Aend:1719419 Bstart:1728620 Bend:1728641 Pairs unsatisfied in distance within a contig. Pair (AGGTTTGTTGACGTTTTTCCT - CTCTTTCACTTCCATGTTTCT) on contig 2 (5014909 nt) Astart:1269516 Aend:1269537 Bstart:1284178 Bend:1284157 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in pairing logic within a contig. Pair (TGACTATATATGGATCATAAG - ATGATTTGCGCAAGTCTCCAG) on contig 19 (3531543 nt) Astart:3059756 Aend:3059735 Bstart:3048967 Bend:3048946 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282842, end:282863) B=2196 nt (start:1023, end:1002) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig. Pair (AACAAAGTTTCAGAGCTAATT - GAAACTATTAGAGGATTGTAA) on contig 2 (5014909 nt) Astart:1268781 Aend:1268802 Bstart:1283443 Bend:1283422 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12811, end:12790) A=91302 nt (start:11382, end:11361) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig. Pair (CAAAATGACTCAAATTTTACA - CAAGCCTGTTGCTGCATGTGT) on contig 6 (6870868 nt) Astart:1138054 Aend:1138033 Bstart:1129627 Bend:1129648 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#58 -> -329129 <- tig#94, A=374416 nt (start:44214, end:44235) B=93323 nt (start:18927, end:18906) CALCULATED DISTANCE APART: -329129 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#265 -> -3126344 <- tig#4, A=1946 nt (start:1866, end:1887) B=3837743 nt (start:3146264, end:3146243) CALCULATED DISTANCE APART: -3126344 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082352, end:2082373) B=976128 nt (start:961170, end:961191) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17050, end:17029) A=1227811 nt (start:6765, end:6744) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459779, end:459758) A=1345436 nt (start:25881, end:25860) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig. Pair (ACTAATATTGTTTCTTGAACG - TACCAAAGTTCTCCACAATAA) on contig 2 (5014909 nt) Astart:1269181 Aend:1269202 Bstart:1283843 Bend:1283822 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig. Pair (TATTATGAATAATACTAAGAT - TATATTTAAGAAGCATCTCAT) on contig 37 (853709 nt) Astart:838634 Aend:838613 Bstart:823129 Bend:823150 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#57 -> -4506482 <- tig#r.11, A=258385 nt (start:256006, end:256027) B=4628067 nt (start:103964, end:103985) CALCULATED DISTANCE APART: -4506482 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TAGAACCTCCAACATCATGAC - TAAGAGTACTGTTAAAATAAT) on contig 15 (3712591 nt) Astart:1792216 Aend:1792195 Bstart:2056272 Bend:2056293 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.47 -> -199625 <- tig#2, B=471458 nt (start:121749, end:121728) A=5014909 nt (start:97876, end:97855) CALCULATED DISTANCE APART: -199625 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#123 -> -347164 <- tig#62, B=42452 nt (start:2049, end:2070) A=354710 nt (start:326761, end:326740) CALCULATED DISTANCE APART: -347164 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -214288 <- tig#6, A=354284 nt (start:132854, end:132875) B=6870868 nt (start:12858, end:12837) CALCULATED DISTANCE APART: -214288 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#36 -> -741896 <- tig#37, A=855454 nt (start:790665, end:790686) B=853709 nt (start:697107, end:697086) CALCULATED DISTANCE APART: -741896 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#12 -> -2263482 <- tig#2, B=2766197 nt (start:1189081, end:1189102) A=5014909 nt (start:706366, end:706345) CALCULATED DISTANCE APART: -2263482 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTCTCTATTATCATATATAGC - AAAGAGGGAAATAAATGGATG) on contig 15 (3712591 nt) Astart:3350020 Aend:3350041 Bstart:3375008 Bend:3374987 CALCULATED DISTANCE APART: 24988 Pairs unsatisfied in pairing logic within a contig. Pair (TCTGTAGTATGACTTTTATAA - GAGAACTTGAAAGAACAACGA) on contig 21 (1811326 nt) Astart:154790 Aend:154769 Bstart:260907 Bend:260886 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#423 -> -926237 <- tig#34, A=1276 nt (start:59, end:80) B=1705564 nt (start:945020, end:944999) CALCULATED DISTANCE APART: -926237 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#118 -> -33564 <- tig#97, B=66247 nt (start:38192, end:38213) A=91050 nt (start:25509, end:25488) CALCULATED DISTANCE APART: -33564 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#265 -> -3126344 <- tig#4, A=1946 nt (start:1856, end:1877) B=3837743 nt (start:3146254, end:3146233) CALCULATED DISTANCE APART: -3126344 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#4 -> -2752665 <- tig#9, B=3837743 nt (start:2984574, end:2984595) A=3747885 nt (start:1919496, end:1919475) CALCULATED DISTANCE APART: -2752665 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.42 -> -1433157 <- tig#20, B=659641 nt (start:2233, end:2212) A=2328057 nt (start:1450924, end:1450903) CALCULATED DISTANCE APART: -1433157 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728418, end:728439) A=1096 nt (start:503, end:482) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#7 -> -3853079 <- tig#36, A=3534247 nt (start:146154, end:146175) B=855454 nt (start:484986, end:484965) CALCULATED DISTANCE APART: -3853079 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#79 -> -614151 <- tig#r.2, A=136600 nt (start:76216, end:76237) B=5014909 nt (start:4441142, end:4441163) CALCULATED DISTANCE APART: -614151 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728613, end:728634) A=1096 nt (start:698, end:677) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#9 -> -3369808 <- tig#22, A=3747885 nt (start:358113, end:358134) B=1636463 nt (start:36, end:15) CALCULATED DISTANCE APART: -3369808 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730722, end:730743) B=3531543 nt (start:3200296, end:3200275) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGATGGCTTGGTATGGTGAAA - TTTCTCACATAAGCGACAACC) on contig 5 (3689108 nt) Astart:1169797 Aend:1169818 Bstart:1184932 Bend:1184911 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.46 -> -633076 <- tig#11, B=577887 nt (start:505883, end:505862) A=4628067 nt (start:147193, end:147172) CALCULATED DISTANCE APART: -633076 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -214292 <- tig#6, A=354284 nt (start:134070, end:134091) B=6870868 nt (start:14078, end:14057) CALCULATED DISTANCE APART: -214292 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#42 -> -1103015 <- tig#r.43, A=659641 nt (start:546956, end:546977) B=1235946 nt (start:225616, end:225637) CALCULATED DISTANCE APART: -1103015 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2261107, end:2261128) B=356404 nt (start:342117, end:342138) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig. Pair (CAGCAAACATTGTTTAATATT - ATCGAGTTGATTCCGGTATGG) on contig 25 (1290536 nt) Astart:990349 Aend:990328 Bstart:975815 Bend:975836 CALCULATED DISTANCE APART: 14534 Pairs unsatisfied in distance within a contig. Pair (GTTGGACCTAATGGGAGTGGA - GTATTCTTGATTCAACAGCTT) on contig 2 (5014909 nt) Astart:1268621 Aend:1268642 Bstart:1283283 Bend:1283262 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig. Pair (ATTTTGCAAATTCTTAAAAAT - AAGTAGGAGGAAGCACAAGAA) on contig 30 (1050452 nt) Astart:650659 Aend:650680 Bstart:666425 Bend:666404 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#95 -> -24340 <- tig#49, B=92653 nt (start:92474, end:92495) A=399963 nt (start:44161, end:44140) CALCULATED DISTANCE APART: -24340 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CATAAGAACTTGAAGTAAACT - TTCCGCTGTTGTTCAATGATT) on contig 19 (3531543 nt) Astart:3059741 Aend:3059720 Bstart:3048982 Bend:3048961 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#27 -> -2327486 <- tig#10, A=1227811 nt (start:703814, end:703835) B=3047199 nt (start:1823489, end:1823468) CALCULATED DISTANCE APART: -2327486 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATTATCAAGAATATTACCGCA - AGATATAAGAGTCTGCTAGAG) on contig 19 (3531543 nt) Astart:3060101 Aend:3060080 Bstart:3048622 Bend:3048601 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136423, end:136444) B=15068 nt (start:1253, end:1274) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -621133 <- tig#r.66, A=2766197 nt (start:2129743, end:2129764) B=201913 nt (start:197234, end:197255) CALCULATED DISTANCE APART: -621133 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#3 -> -5324663 <- tig#7, A=3889482 nt (start:1093655, end:1093676) B=3534247 nt (start:2548836, end:2548815) CALCULATED DISTANCE APART: -5324663 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -322558 <- tig#r.572, A=2650694 nt (start:2308810, end:2308831) B=1031 nt (start:357, end:378) CALCULATED DISTANCE APART: -322558 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGTTGGCATTTAGATGGATAA - TACAATGTTGAAGATACTAGT) on contig 5 (3689108 nt) Astart:1178602 Aend:1178581 Bstart:1163468 Bend:1163489 CALCULATED DISTANCE APART: 15134 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.20 -> -2413469 <- tig#37, B=2328057 nt (start:2055460, end:2055439) A=853709 nt (start:378009, end:377988) CALCULATED DISTANCE APART: -2413469 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#65 -> -76362 <- tig#140, A=286124 nt (start:200777, end:200798) B=26310 nt (start:11015, end:10994) CALCULATED DISTANCE APART: -76362 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#57 -> -4506482 <- tig#r.11, A=258385 nt (start:255901, end:255922) B=4628067 nt (start:104069, end:104090) CALCULATED DISTANCE APART: -4506482 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#25 -> -666259 <- tig#2, B=1290536 nt (start:852812, end:852833) A=5014909 nt (start:248535, end:248514) CALCULATED DISTANCE APART: -666259 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:729812, end:729833) B=3531543 nt (start:3199386, end:3199365) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#34 -> -1107958 <- tig#79, A=1705564 nt (start:661526, end:661547) B=136600 nt (start:83920, end:83899) CALCULATED DISTANCE APART: -1107958 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.6 -> -33388 <- tig#115, B=6870868 nt (start:12313, end:12292) A=66709 nt (start:41075, end:41054) CALCULATED DISTANCE APART: -33388 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.27 -> -1225184 <- tig#1, B=1227811 nt (start:1227668, end:1227647) A=4853111 nt (start:17516, end:17495) CALCULATED DISTANCE APART: -1225184 < -2000 Pairs unsatisfied in distance within a contig. Pair (AATGGATTGTACGAAACTGTT - TTTCACGTTCTTGAACCGATG) on contig 2 (5014909 nt) Astart:1268961 Aend:1268982 Bstart:1283623 Bend:1283602 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#51 -> -623213 <- tig#r.54, A=875428 nt (start:750790, end:750811) B=625914 nt (start:107339, end:107360) CALCULATED DISTANCE APART: -623213 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATTTTTTATTTTTTGGTGTGT - GTATTATGTGTGGTCTCTTGT) on contig 15 (3712591 nt) Astart:1717428 Aend:1717449 Bstart:1730590 Bend:1730611 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -7514397 <- tig#2, B=4628067 nt (start:4149967, end:4149946) A=5014909 nt (start:3384430, end:3384409) CALCULATED DISTANCE APART: -7514397 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATATAATTCGTTTGTGCAGTA - CACTTTCAAGTTCGTCAATGC) on contig 37 (853709 nt) Astart:838744 Aend:838723 Bstart:823239 Bend:823260 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#15 -> -8116131 <- tig#6, B=3712591 nt (start:342984, end:343005) A=6870868 nt (start:4766524, end:4766503) CALCULATED DISTANCE APART: -8116131 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282282, end:282303) B=2196 nt (start:463, end:442) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4186264, end:4186243) A=3712591 nt (start:297, end:276) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#46 -> -354208 <- tig#186, B=577887 nt (start:211983, end:212004) A=8794 nt (start:8304, end:8283) CALCULATED DISTANCE APART: -354208 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTAATATTAGTTTTCAAAGTT - ATAAAAAAAAATTCCGCTACG) on contig 19 (3531543 nt) Astart:3060481 Aend:3060460 Bstart:3048242 Bend:3048221 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#126 -> -106004 <- tig#80, B=40796 nt (start:38587, end:38608) A=191116 nt (start:123795, end:123774) CALCULATED DISTANCE APART: -106004 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728543, end:728564) A=1096 nt (start:628, end:607) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460664, end:460643) A=1345436 nt (start:24996, end:24975) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#16 -> -1845669 <- tig#270, B=2098954 nt (start:233401, end:233422) A=1880 nt (start:116, end:95) CALCULATED DISTANCE APART: -1845669 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.403 -> -2330792 <- tig#13, B=1321 nt (start:995, end:974) A=2650694 nt (start:2349797, end:2349776) CALCULATED DISTANCE APART: -2330792 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#34 -> -6318 <- tig#r.132, A=1705564 nt (start:1679285, end:1679306) B=34686 nt (start:34647, end:34668) CALCULATED DISTANCE APART: -6318 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#34 -> -31471 <- tig#167, A=1705564 nt (start:1679285, end:1679306) B=25236 nt (start:25192, end:25171) CALCULATED DISTANCE APART: -31471 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#95 -> -16969 <- tig#54, B=92653 nt (start:92390, end:92411) A=625914 nt (start:36706, end:36685) CALCULATED DISTANCE APART: -16969 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGAAATCTATTTCAAAGCTAA - TATATTCAAAAGCAGGAATCG) on contig 60 (232804 nt) Astart:31322 Aend:31343 Bstart:57600 Bend:57579 CALCULATED DISTANCE APART: 26278 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.48 -> -3108448 <- tig#12, B=487359 nt (start:403999, end:403978) A=2766197 nt (start:2724449, end:2724428) CALCULATED DISTANCE APART: -3108448 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#114 -> -1696557 <- tig#34, A=54818 nt (start:17564, end:17585) B=1705564 nt (start:1679303, end:1679282) CALCULATED DISTANCE APART: -1696557 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16975, end:16954) A=1227811 nt (start:6840, end:6819) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#25 -> -666259 <- tig#2, B=1290536 nt (start:852832, end:852853) A=5014909 nt (start:248555, end:248534) CALCULATED DISTANCE APART: -666259 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16820, end:16799) A=1227811 nt (start:6995, end:6974) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#34 -> -3900848 <- tig#r.11, A=1705564 nt (start:54537, end:54558) B=4628067 nt (start:2358246, end:2358267) CALCULATED DISTANCE APART: -3900848 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.43 -> -2760956 <- tig#2, B=1235946 nt (start:445233, end:445212) A=5014909 nt (start:2335723, end:2335702) CALCULATED DISTANCE APART: -2760956 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#38 -> -891893 <- tig#35, B=1143067 nt (start:994950, end:994971) A=1135475 nt (start:763776, end:763755) CALCULATED DISTANCE APART: -891893 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGCTTTCTAGTAATGTGAATT - TATTGGATTCTCCATCTCATT) on contig 2 (5014909 nt) Astart:1268916 Aend:1268937 Bstart:1283578 Bend:1283557 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig. Pair (AGTCCAAAAGAGGCAAAAAAA - TAAACTTCGTGTCATGCAGGA) on contig 6 (6870868 nt) Astart:1137979 Aend:1137958 Bstart:1129552 Bend:1129573 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#52 -> -355614 <- tig#3, B=356404 nt (start:27, end:48) A=3889482 nt (start:19237, end:19216) CALCULATED DISTANCE APART: -355614 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#81 -> -2917515 <- tig#r.7, A=258617 nt (start:241229, end:241250) B=3534247 nt (start:614120, end:614141) CALCULATED DISTANCE APART: -2917515 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -214279 <- tig#6, A=354284 nt (start:132688, end:132709) B=6870868 nt (start:12683, end:12662) CALCULATED DISTANCE APART: -214279 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.38 -> -1310007 <- tig#33, B=1143067 nt (start:1039139, end:1039118) A=1290487 nt (start:290868, end:290847) CALCULATED DISTANCE APART: -1310007 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282592, end:282613) B=2196 nt (start:773, end:752) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#47 -> -347211 <- tig#53, B=471458 nt (start:285518, end:285539) A=354284 nt (start:181271, end:181250) CALCULATED DISTANCE APART: -347211 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#283 -> -3818458 <- tig#2, A=1768 nt (start:418, end:439) B=5014909 nt (start:3837108, end:3837087) CALCULATED DISTANCE APART: -3818458 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#36 -> -890709 <- tig#31, B=855454 nt (start:85384, end:85405) A=976128 nt (start:140639, end:140618) CALCULATED DISTANCE APART: -890709 < -2000 Pairs unsatisfied in distance within a contig. Pair (TATTGGGCCTCTGAGAGCACA - ACGTAAGCAACGTCGACAATT) on contig 15 (3712591 nt) Astart:2103256 Aend:2103235 Bstart:2056442 Bend:2056463 CALCULATED DISTANCE APART: 46814 Pairs unsatisfied in pairing logic within a contig. Pair (TCATGATTAGGTTAAGAATTC - GGTAATAGGTTCGATGTGTGG) on contig 15 (3712591 nt) Astart:1719078 Aend:1719099 Bstart:1728940 Bend:1728961 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#54 -> -327960 <- tig#r.53, A=625914 nt (start:324327, end:324348) B=354284 nt (start:307911, end:307932) CALCULATED DISTANCE APART: -327960 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#120 -> -1341554 <- tig#29, B=44710 nt (start:43317, end:43338) A=1463708 nt (start:1360161, end:1360140) CALCULATED DISTANCE APART: -1341554 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#1 -> -4220727 <- tig#r.10, A=4853111 nt (start:1841094, end:1841115) B=3047199 nt (start:1818489, end:1818510) CALCULATED DISTANCE APART: -4220727 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGTAAATGTATACACTATTTA - AATTAGTCAATAGATGTATAA) on contig 37 (853709 nt) Astart:838589 Aend:838568 Bstart:823084 Bend:823105 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:458889, end:458868) A=1345436 nt (start:26771, end:26750) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219466, end:4219445) A=2598 nt (start:2155, end:2134) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219166, end:4219145) A=2598 nt (start:2455, end:2434) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#19 -> -3044633 <- tig#r.72, A=3531543 nt (start:471421, end:471442) B=172011 nt (start:167500, end:167521) CALCULATED DISTANCE APART: -3044633 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -40662 <- tig#443, A=736718 nt (start:676501, end:676522) B=1213 nt (start:445, end:424) CALCULATED DISTANCE APART: -40662 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#74 -> -258350 <- tig#56, B=238371 nt (start:58966, end:58987) A=262460 nt (start:98945, end:98924) CALCULATED DISTANCE APART: -258350 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#6 -> -40178 <- tig#91, A=6870868 nt (start:6827070, end:6827091) B=101959 nt (start:16380, end:16359) CALCULATED DISTANCE APART: -40178 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#8 -> -4732278 <- tig#4, B=5070776 nt (start:760738, end:760759) A=3837743 nt (start:442240, end:442219) CALCULATED DISTANCE APART: -4732278 < -2000 Pairs unsatisfied in distance within a contig. Pair (TAACTCTTATGTTTATTTGGT - TGAAACCTAGTGTTTGTAAAA) on contig 2 (5014909 nt) Astart:1268746 Aend:1268767 Bstart:1283408 Bend:1283387 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459459, end:459438) A=1345436 nt (start:26201, end:26180) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -1168778 <- tig#384, A=5070776 nt (start:3882940, end:3882961) B=1359 nt (start:942, end:921) CALCULATED DISTANCE APART: -1168778 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#265 -> -3126344 <- tig#4, A=1946 nt (start:1616, end:1637) B=3837743 nt (start:3146014, end:3145993) CALCULATED DISTANCE APART: -3126344 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#53 -> -24523 <- tig#2, B=354284 nt (start:340899, end:340920) A=5014909 nt (start:31138, end:31117) CALCULATED DISTANCE APART: -24523 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.30 -> -1857118 <- tig#14, B=1050452 nt (start:59740, end:59719) A=2271162 nt (start:1817378, end:1817357) CALCULATED DISTANCE APART: -1857118 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33344, end:33323) A=855454 nt (start:19105, end:19084) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#22 -> -6369340 <- tig#6, B=1636463 nt (start:14772, end:14793) A=6870868 nt (start:4767649, end:4767628) CALCULATED DISTANCE APART: -6369340 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:458719, end:458698) A=1345436 nt (start:26941, end:26920) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.25 -> -1123940 <- tig#98, B=1290536 nt (start:1121796, end:1121775) A=88184 nt (start:22144, end:22123) CALCULATED DISTANCE APART: -1123940 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:458984, end:458963) A=1345436 nt (start:26676, end:26655) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.47 -> -199625 <- tig#2, B=471458 nt (start:121739, end:121718) A=5014909 nt (start:97886, end:97865) CALCULATED DISTANCE APART: -199625 < -2000 Pairs unsatisfied in distance within a contig. Pair (AATTTTTGTTATAATGTTTAA - TCATAATAATACAAATTCCTC) on contig 34 (1705564 nt) Astart:679424 Aend:679403 Bstart:664461 Bend:664482 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig. Pair (TGCAGAAACTGTTTACGCATC - TGCCGATTTGCTACAGTGACA) on contig 19 (3531543 nt) Astart:1348124 Aend:1348103 Bstart:1310979 Bend:1311000 CALCULATED DISTANCE APART: 37145 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459524, end:459503) A=1345436 nt (start:26136, end:26115) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AAAAGATGCTCGTTGTGCCGC - CGTAGTTTCCGTACGTACCCG) on contig 15 (3712591 nt) Astart:1718383 Aend:1718404 Bstart:1729635 Bend:1729656 Pairs unsatisfied in distance within a contig. Pair (TTGTGTTTTCTTTTAGTCACT - GTGAATGTAAGTAGGTTACCG) on contig 2 (5014909 nt) Astart:1268711 Aend:1268732 Bstart:1283373 Bend:1283352 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#53 -> -1687810 <- tig#34, B=354284 nt (start:325780, end:325801) A=1705564 nt (start:1679306, end:1679285) CALCULATED DISTANCE APART: -1687810 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#125 -> -1676823 <- tig#34, B=54013 nt (start:36496, end:36517) A=1705564 nt (start:1679306, end:1679285) CALCULATED DISTANCE APART: -1676823 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#33 -> -492044 <- tig#32, A=1290487 nt (start:1235772, end:1235793) B=972151 nt (start:457329, end:457308) CALCULATED DISTANCE APART: -492044 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TCCATGCACCGATGCACGAGT - TAACACATTACAGTTAATTTT) on contig 19 (3531543 nt) Astart:3059133 Aend:3059112 Bstart:3049587 Bend:3049566 Pairs unsatisfied in distance within a contig. Pair (TCCCGATAAAATCTCGAAACT - TAACAGGTCACCTGCTTCAGC) on contig 46 (577887 nt) Astart:183315 Aend:183336 Bstart:200765 Bend:200744 CALCULATED DISTANCE APART: 17450 Pairs unsatisfied in pairing logic within a contig. Pair (ATAATTTTAATAATTATTAAT - TGATCGGAGCTATAACGGCTT) on contig 5 (3689108 nt) Astart:208432 Aend:208453 Bstart:351725 Bend:351746 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082342, end:2082363) B=976128 nt (start:961180, end:961201) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#86 -> -37688 <- tig#131, B=280231 nt (start:222705, end:222726) A=36503 nt (start:162, end:141) CALCULATED DISTANCE APART: -37688 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#54 -> -327960 <- tig#r.53, A=625914 nt (start:324122, end:324143) B=354284 nt (start:308116, end:308137) CALCULATED DISTANCE APART: -327960 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#146 -> -3219 <- tig#109, B=21489 nt (start:5139, end:5160) A=66564 nt (start:6869, end:6848) CALCULATED DISTANCE APART: -3219 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGCATTCTGGGAGACGTCAAT - TACACAGTTTACCCCTTTGAG) on contig 15 (3712591 nt) Astart:3352427 Aend:3352448 Bstart:3377413 Bend:3377392 CALCULATED DISTANCE APART: 24986 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#47 -> -293198 <- tig#6, A=471458 nt (start:172283, end:172304) B=6870868 nt (start:14023, end:14002) CALCULATED DISTANCE APART: -293198 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#84 -> -306940 <- tig#53, A=197079 nt (start:195937, end:195958) B=354284 nt (start:325798, end:325777) CALCULATED DISTANCE APART: -306940 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCTTTGGGCTTTCCGAAAAAG - TGTTGTATGATGCGAGAGTTT) on contig 118 (66247 nt) Astart:2259 Aend:2280 Bstart:6680 Bend:6659 CALCULATED DISTANCE APART: 4421 Pairs unsatisfied in pairing logic within a contig. Pair (CAACAGAACACAATAAAGAAC - CAGTTTAATTTTGTTCGGATC) on contig 53 (354284 nt) Astart:242923 Aend:242902 Bstart:340314 Bend:340335 Pairs unsatisfied in distance within a contig. Pair (TTGAAACCCTCAATGAAAGCC - TATCAACTTGCTCATCAATTC) on contig 2 (5014909 nt) Astart:1269441 Aend:1269462 Bstart:1284103 Bend:1284082 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#8 -> -8582106 <- tig#6, B=5070776 nt (start:528017, end:528038) A=6870868 nt (start:4059347, end:4059326) CALCULATED DISTANCE APART: -8582106 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16170, end:16149) A=1227811 nt (start:7645, end:7624) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#133 -> -14721 <- tig#93, B=34073 nt (start:6200, end:6221) A=152036 nt (start:6848, end:6827) CALCULATED DISTANCE APART: -14721 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2665, end:2686) A=258385 nt (start:1201, end:1180) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730727, end:730748) B=3531543 nt (start:3200301, end:3200280) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4186114, end:4186093) A=3712591 nt (start:447, end:426) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#25 -> -666259 <- tig#2, B=1290536 nt (start:852842, end:852863) A=5014909 nt (start:248565, end:248544) CALCULATED DISTANCE APART: -666259 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282687, end:282708) B=2196 nt (start:868, end:847) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#33 -> -492044 <- tig#32, A=1290487 nt (start:1235672, end:1235693) B=972151 nt (start:457229, end:457208) CALCULATED DISTANCE APART: -492044 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#63 -> -436611 <- tig#r.75, A=274372 nt (start:182831, end:182852) B=373953 nt (start:8883, end:8904) CALCULATED DISTANCE APART: -436611 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#7 -> -70769 <- tig#51, A=3534247 nt (start:3500288, end:3500309) B=875428 nt (start:56810, end:56789) CALCULATED DISTANCE APART: -70769 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTTAGATGATTGTGTCATGAT - CAATTTACACAGAAACATGTT) on contig 37 (853709 nt) Astart:538882 Aend:538903 Bstart:551552 Bend:551531 CALCULATED DISTANCE APART: 12670 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#103 -> -259849 <- tig#r.48, A=211876 nt (start:14664, end:14685) B=487359 nt (start:404722, end:404743) CALCULATED DISTANCE APART: -259849 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#433 -> -944078 <- tig#r.29, A=1238 nt (start:811, end:832) B=1463708 nt (start:500057, end:500078) CALCULATED DISTANCE APART: -944078 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATAAACTCATTTGTAACAAAT - CTCCCTTTGTCTGTCCTGAAG) on contig 2 (5014909 nt) Astart:1269791 Aend:1269812 Bstart:1284453 Bend:1284432 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in pairing logic within a contig. Pair (GTGTGTGATCTCTCTCGTCTT - ACGGTTAGTCCCGGACCGAGA) on contig 15 (3712591 nt) Astart:1792076 Aend:1792055 Bstart:2056137 Bend:2056158 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#64 -> -210568 <- tig#109, B=211265 nt (start:53, end:74) A=66564 nt (start:19356, end:19335) CALCULATED DISTANCE APART: -210568 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728848, end:728869) A=1096 nt (start:933, end:912) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#26 -> -90650 <- tig#95, B=1332708 nt (start:1310448, end:1310469) A=92653 nt (start:88390, end:88369) CALCULATED DISTANCE APART: -90650 < -2000 Pairs unsatisfied in distance within a contig. Pair (TAGTAAAACATTTAACGAAAG - TTGGGTTTTTGTATAAAGAAA) on contig 34 (1705564 nt) Astart:679859 Aend:679838 Bstart:664896 Bend:664917 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#19 -> -5298475 <- tig#r.11, A=3531543 nt (start:2694055, end:2694076) B=4628067 nt (start:147080, end:147101) CALCULATED DISTANCE APART: -5298475 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCTTTAAAATGGATTGATGCT - CCAGGTATGACCTTCTTGTTT) on contig 6 (6870868 nt) Astart:4411839 Aend:4411860 Bstart:4445793 Bend:4445772 CALCULATED DISTANCE APART: 33954 Pairs unsatisfied in distance within a contig. Pair (TCATGAAGCCGAAAGCACAAG - TTAGTCAAAACTCTAAACTAA) on contig 2 (5014909 nt) Astart:1269231 Aend:1269252 Bstart:1283893 Bend:1283872 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig. Pair (AAGTTGATACAAGATTCAAGG - CAGTATCAGAAACCTTTGGTG) on contig 4 (3837743 nt) Astart:1822679 Aend:1822658 Bstart:1799604 Bend:1799625 CALCULATED DISTANCE APART: 23075 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#47 -> -583213 <- tig#r.69, A=471458 nt (start:9928, end:9949) B=186132 nt (start:44449, end:44470) CALCULATED DISTANCE APART: -583213 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTATAATTGAGGAAAATGCTA - ATTTTGTCTTTCATCCAGGTG) on contig 6 (6870868 nt) Astart:1138269 Aend:1138248 Bstart:1129842 Bend:1129863 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.521 -> -111709 <- tig#63, B=1100 nt (start:682, end:661) A=274372 nt (start:131027, end:131006) CALCULATED DISTANCE APART: -111709 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGATTAGGTTCTTGATAATGA - TAAACTGTTGCGAAACACAAA) on contig 2 (5014909 nt) Astart:1270026 Aend:1270047 Bstart:1284688 Bend:1284667 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#7 -> -3427098 <- tig#r.41, A=3534247 nt (start:666257, end:666278) B=667251 nt (start:88143, end:88164) CALCULATED DISTANCE APART: -3427098 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#136 -> -33122 <- tig#143, A=49085 nt (start:10225, end:10246) B=24293 nt (start:14262, end:14241) CALCULATED DISTANCE APART: -33122 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135558, end:135579) B=15068 nt (start:2118, end:2139) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#114 -> -25427 <- tig#115, B=54818 nt (start:17415, end:17436) A=66709 nt (start:8024, end:8003) CALCULATED DISTANCE APART: -25427 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.12 -> -2600836 <- tig#387, B=2766197 nt (start:2620529, end:2620508) A=1354 nt (start:307, end:286) CALCULATED DISTANCE APART: -2600836 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TATAACCTTGATATAGTTAAA - GTAGTAGCCAAAACTCAAAAG) on contig 19 (3531543 nt) Astart:3058398 Aend:3058377 Bstart:3050322 Bend:3050301 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#49 -> -1152645 <- tig#r.43, A=399963 nt (start:351821, end:351842) B=1235946 nt (start:111443, end:111464) CALCULATED DISTANCE APART: -1152645 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTTCGGTATGTATGATGTGTT - CAAAATTAAGAACATTTCTTA) on contig 19 (3531543 nt) Astart:3058153 Aend:3058132 Bstart:3050567 Bend:3050546 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136183, end:136204) B=15068 nt (start:1493, end:1514) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AAATCTTAGAATATATCTGTT - AACCAAATCTAGAATTCTATG) on contig 19 (3531543 nt) Astart:3059496 Aend:3059475 Bstart:3049227 Bend:3049206 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.47 -> -199625 <- tig#2, B=471458 nt (start:121409, end:121388) A=5014909 nt (start:98216, end:98195) CALCULATED DISTANCE APART: -199625 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730402, end:730423) B=3531543 nt (start:3199976, end:3199955) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig. Pair (CAGAAGGCTATTGTTGCTTTC - CATCGCTGTAATTTACAGGTG) on contig 31 (976128 nt) Astart:41249 Aend:41270 Bstart:68799 Bend:68778 CALCULATED DISTANCE APART: 27550 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -621133 <- tig#r.66, A=2766197 nt (start:2129658, end:2129679) B=201913 nt (start:197319, end:197340) CALCULATED DISTANCE APART: -621133 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TACTCGATGGGTTTACTATTT - TGTCACGTAAGTGCTAAGTTC) on contig 4 (3837743 nt) Astart:2358461 Aend:2358482 Bstart:2359601 Bend:2359622 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#77 -> -122338 <- tig#99, B=160344 nt (start:25174, end:25195) A=88102 nt (start:7168, end:7147) CALCULATED DISTANCE APART: -122338 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -4201 <- tig#r.96, A=262460 nt (start:244356, end:244377) B=91302 nt (start:85205, end:85226) CALCULATED DISTANCE APART: -4201 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#34 -> -1056226 <- tig#r.65, A=1705564 nt (start:662331, end:662352) B=286124 nt (start:253131, end:253152) CALCULATED DISTANCE APART: -1056226 < -2000 Pairs unsatisfied in distance within a contig. Pair (CAAGAACTTCAGTCACAAGCG - AAAATAAAAATAAGACTGAAA) on contig 5 (3689108 nt) Astart:1178547 Aend:1178526 Bstart:1163413 Bend:1163434 CALCULATED DISTANCE APART: 15134 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#101 -> -2656718 <- tig#12, A=84691 nt (start:11275, end:11296) B=2766197 nt (start:2603302, end:2603281) CALCULATED DISTANCE APART: -2656718 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#34 -> -1056226 <- tig#r.65, A=1705564 nt (start:662336, end:662357) B=286124 nt (start:253126, end:253147) CALCULATED DISTANCE APART: -1056226 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.22 -> -1086831 <- tig#42, B=1636463 nt (start:815545, end:815524) A=659641 nt (start:291286, end:291265) CALCULATED DISTANCE APART: -1086831 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#112 -> -911051 <- tig#11, B=54810 nt (start:14699, end:14720) A=4628067 nt (start:890940, end:890919) CALCULATED DISTANCE APART: -911051 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#6 -> -1309140 <- tig#11, B=6870868 nt (start:6432668, end:6432689) A=4628067 nt (start:890940, end:890919) CALCULATED DISTANCE APART: -1309140 < -2000 Pairs unsatisfied in distance within a contig. Pair (CAAACTAAATAATTAGTCCCA - AAGGTAAATTACCGTGTGACC) on contig 60 (232804 nt) Astart:31272 Aend:31293 Bstart:57550 Bend:57529 CALCULATED DISTANCE APART: 26278 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728773, end:728794) A=1096 nt (start:858, end:837) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig. Pair (CATCTCAACACTTGCTTCCAC - CGTTAATTTTTTCGATTTTGT) on contig 6 (6870868 nt) Astart:1138979 Aend:1138958 Bstart:1130496 Bend:1130517 CALCULATED DISTANCE APART: 8483 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -40662 <- tig#443, A=736718 nt (start:676586, end:676607) B=1213 nt (start:530, end:509) CALCULATED DISTANCE APART: -40662 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728263, end:728284) A=1096 nt (start:348, end:327) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.155 -> -71281 <- tig#71, B=18420 nt (start:16236, end:16215) A=271268 nt (start:75045, end:75024) CALCULATED DISTANCE APART: -71281 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#3 -> -3618470 <- tig#27, B=3889482 nt (start:316574, end:316595) A=1227811 nt (start:65562, end:65541) CALCULATED DISTANCE APART: -3618470 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#46 -> -523088 <- tig#r.48, A=577887 nt (start:136126, end:136147) B=487359 nt (start:386032, end:386053) CALCULATED DISTANCE APART: -523088 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282982, end:283003) B=2196 nt (start:1163, end:1142) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AAGTATTTGTTTCAATGTGAT - AAAAAAAGTTATCAGACTCGT) on contig 19 (3531543 nt) Astart:3058563 Aend:3058542 Bstart:3050157 Bend:3050136 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#11 -> -2613871 <- tig#45, A=4628067 nt (start:2029608, end:2029629) B=528133 nt (start:35412, end:35391) CALCULATED DISTANCE APART: -2613871 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGGAAGCTCCCTAATTGTCAC - CCTGTTTTGATATTACCTAAC) on contig 30 (1050452 nt) Astart:650599 Aend:650620 Bstart:666365 Bend:666344 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#103 -> -259870 <- tig#r.48, A=211876 nt (start:14084, end:14105) B=487359 nt (start:405281, end:405302) CALCULATED DISTANCE APART: -259870 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TCAATTTTTGATATATTGAAC - CAAAAACGATAATAAATAAGA) on contig 19 (3531543 nt) Astart:3059386 Aend:3059365 Bstart:3049337 Bend:3049316 Pairs unsatisfied in distance within a contig. Pair (CTAGGAATTATTGCAAAAACA - GAGATATGTTTGTGGATGTCC) on contig 10 (3047199 nt) Astart:790079 Aend:790058 Bstart:776166 Bend:776187 CALCULATED DISTANCE APART: 13913 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.20 -> -2413469 <- tig#37, B=2328057 nt (start:2055370, end:2055349) A=853709 nt (start:378099, end:378078) CALCULATED DISTANCE APART: -2413469 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17150, end:17129) A=1227811 nt (start:6665, end:6644) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGTGGAGAAACAACTCAAAAA - CTTCAACGTTACCATATTTTT) on contig 5 (3689108 nt) Astart:1169442 Aend:1169463 Bstart:1184577 Bend:1184556 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#3 -> -3661461 <- tig#r.56, A=3889482 nt (start:401879, end:401900) B=262460 nt (start:68602, end:68623) CALCULATED DISTANCE APART: -3661461 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGAACTCTTTTTCTATTACTA - CCAAAAACAACATAAATTATA) on contig 13 (2650694 nt) Astart:2350802 Aend:2350781 Bstart:2327454 Bend:2327475 CALCULATED DISTANCE APART: 23348 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#305 -> -2202335 <- tig#r.19, A=1638 nt (start:187, end:208) B=3531543 nt (start:1310659, end:1310680) CALCULATED DISTANCE APART: -2202335 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260742, end:2260763) B=356404 nt (start:342482, end:342503) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#38 -> -1110027 <- tig#78, B=1143067 nt (start:143151, end:143172) A=184063 nt (start:130111, end:130090) CALCULATED DISTANCE APART: -1110027 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#11 -> -4878195 <- tig#29, A=4628067 nt (start:684241, end:684262) B=1463708 nt (start:954369, end:954348) CALCULATED DISTANCE APART: -4878195 < -2000 Pairs unsatisfied in distance within a contig. Pair (CCTAGATTGAGCCGAATGATT - TTGAGAAAGTAAAAGGTAAAG) on contig 15 (3712591 nt) Astart:3350360 Aend:3350381 Bstart:3375348 Bend:3375327 CALCULATED DISTANCE APART: 24988 Pairs unsatisfied in pairing logic within a contig. Pair (TTACTTACATAATATTAGATA - TGCGAAATATCCCGACTGACT) on contig 131 (36503 nt) Astart:19753 Aend:19774 Bstart:13862 Bend:13883 Pairs unsatisfied in distance within a contig. Pair (CGACTGTCATGTGATTATGAG - AATGCTCTTTTTCCCTGCCTT) on contig 30 (1050452 nt) Astart:648629 Aend:648650 Bstart:673663 Bend:673642 CALCULATED DISTANCE APART: 25034 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#49 -> -1738522 <- tig#19, B=399963 nt (start:43866, end:43887) A=3531543 nt (start:1402425, end:1402404) CALCULATED DISTANCE APART: -1738522 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TCATGACTCTTTCATTTTTCT - TCATCTTCTTCATCACCTTTT) on contig 14 (2271162 nt) Astart:1848916 Aend:1848895 Bstart:2003834 Bend:2003813 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#7 -> -3853079 <- tig#36, A=3534247 nt (start:146024, end:146045) B=855454 nt (start:484856, end:484835) CALCULATED DISTANCE APART: -3853079 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#40 -> -2348094 <- tig#7, B=668174 nt (start:554947, end:554968) A=3534247 nt (start:2254867, end:2254846) CALCULATED DISTANCE APART: -2348094 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTCTTGATGACACCCCTAACA - AAATTGGGAATGAAAGAAGAA) on contig 15 (3712591 nt) Astart:3352302 Aend:3352323 Bstart:3377288 Bend:3377267 CALCULATED DISTANCE APART: 24986 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459314, end:459293) A=1345436 nt (start:26346, end:26325) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135393, end:135414) B=15068 nt (start:2283, end:2304) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459394, end:459373) A=1345436 nt (start:26266, end:26245) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#22 -> -6369342 <- tig#6, B=1636463 nt (start:14585, end:14606) A=6870868 nt (start:4767464, end:4767443) CALCULATED DISTANCE APART: -6369342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#265 -> -3126344 <- tig#4, A=1946 nt (start:1876, end:1897) B=3837743 nt (start:3146274, end:3146253) CALCULATED DISTANCE APART: -3126344 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.17 -> -1813129 <- tig#74, B=1959065 nt (start:1774051, end:1774030) A=238371 nt (start:59078, end:59057) CALCULATED DISTANCE APART: -1813129 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GAAAGCAGTACCTCCGAAGCA - TCATTTCACAGCTTGCACTTC) on contig 15 (3712591 nt) Astart:1716708 Aend:1716729 Bstart:1731310 Bend:1731331 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#433 -> -944078 <- tig#r.29, A=1238 nt (start:581, end:602) B=1463708 nt (start:500287, end:500308) CALCULATED DISTANCE APART: -944078 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.140 -> -477620 <- tig#48, B=26310 nt (start:11660, end:11639) A=487359 nt (start:485960, end:485939) CALCULATED DISTANCE APART: -477620 < -2000 Pairs unsatisfied in distance within a contig. Pair (GAAGCAGCTAGAATCTGGAAT - ACGTCCTCAACAATGGACTTT) on contig 1 (4853111 nt) Astart:347040 Aend:347061 Bstart:392317 Bend:392296 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#305 -> -2202335 <- tig#r.19, A=1638 nt (start:32, end:53) B=3531543 nt (start:1310814, end:1310835) CALCULATED DISTANCE APART: -2202335 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#54 -> -327960 <- tig#r.53, A=625914 nt (start:323987, end:324008) B=354284 nt (start:308251, end:308272) CALCULATED DISTANCE APART: -327960 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGCTAGAATCTGGAATGATAT - TCAGTACGTCCTCAACAATGG) on contig 1 (4853111 nt) Astart:347045 Aend:347066 Bstart:392322 Bend:392301 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#118 -> -33564 <- tig#97, B=66247 nt (start:38042, end:38063) A=91050 nt (start:25359, end:25338) CALCULATED DISTANCE APART: -33564 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -284623 <- tig#48, B=4628067 nt (start:247513, end:247492) A=487359 nt (start:57110, end:57089) CALCULATED DISTANCE APART: -284623 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.77 -> -3516613 <- tig#7, B=160344 nt (start:13516, end:13495) A=3534247 nt (start:3523097, end:3523076) CALCULATED DISTANCE APART: -3516613 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#120 -> -1341554 <- tig#29, B=44710 nt (start:43597, end:43618) A=1463708 nt (start:1360441, end:1360420) CALCULATED DISTANCE APART: -1341554 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.38 -> -1426764 <- tig#29, B=1143067 nt (start:1039734, end:1039713) A=1463708 nt (start:407030, end:407009) CALCULATED DISTANCE APART: -1426764 < -2000 Pairs unsatisfied in distance within a contig. Pair (GAAAGTCGAAAACTTGTAATG - TTGCGCCTTGGCACAAGCACC) on contig 10 (3047199 nt) Astart:790029 Aend:790008 Bstart:766291 Bend:766312 CALCULATED DISTANCE APART: 23738 Pairs unsatisfied in pairing logic within a contig. Pair (ATAAAATACTTAGATTATTTA - AGACAAGTTAATAATGTAATA) on contig 19 (3531543 nt) Astart:3060506 Aend:3060485 Bstart:3048217 Bend:3048196 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.27 -> -1227069 <- tig#3, B=1227811 nt (start:1227667, end:1227646) A=3889482 nt (start:19402, end:19381) CALCULATED DISTANCE APART: -1227069 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185534, end:4185513) A=3712591 nt (start:1027, end:1006) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728258, end:728279) A=1096 nt (start:343, end:322) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728208, end:728229) A=1096 nt (start:293, end:272) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGTGACAAGTCGTGCGGTGGT - GGTTCAGTGATCTCATTCTCC) on contig 19 (3531543 nt) Astart:3060216 Aend:3060195 Bstart:3048507 Bend:3048486 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6228 <- tig#57, B=27696 nt (start:1554, end:1575) A=258385 nt (start:86, end:65) CALCULATED DISTANCE APART: -6228 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#12 -> -245465 <- tig#56, B=2766197 nt (start:2696536, end:2696557) A=262460 nt (start:195804, end:195783) CALCULATED DISTANCE APART: -245465 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -1335763 <- tig#4, B=3747885 nt (start:2857602, end:2857623) A=3837743 nt (start:465480, end:465459) CALCULATED DISTANCE APART: -1335763 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2535, end:2556) A=258385 nt (start:1071, end:1050) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig. Pair (GGATAACCGATGATTTACGAT - CTACATGTCATCCGCAAACTG) on contig 30 (1050452 nt) Astart:649544 Aend:649565 Bstart:665310 Bend:665289 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in pairing logic within a contig. Pair (ACTTGCAAACAAATCGAAGGG - TTGAGACAAGAAGGATGAGAG) on contig 15 (3712591 nt) Astart:1716763 Aend:1716784 Bstart:1731255 Bend:1731276 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#120 -> -1341554 <- tig#29, B=44710 nt (start:43952, end:43973) A=1463708 nt (start:1360796, end:1360775) CALCULATED DISTANCE APART: -1341554 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10413, end:10392) A=2766197 nt (start:2151150, end:2151129) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig. Pair (CAAAGAGTTTGAAAGGCAGGA - GTGGCCGAAGTTCTTGCCAGA) on contig 2 (5014909 nt) Astart:1270071 Aend:1270092 Bstart:1284733 Bend:1284712 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#119 -> -7707 <- tig#r.49, A=46878 nt (start:32005, end:32026) B=399963 nt (start:387129, end:387150) CALCULATED DISTANCE APART: -7707 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.167 -> -39857 <- tig#132, B=25236 nt (start:25190, end:25169) A=34686 nt (start:34667, end:34646) CALCULATED DISTANCE APART: -39857 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.34 -> -1693965 <- tig#132, B=1705564 nt (start:1679298, end:1679277) A=34686 nt (start:34667, end:34646) CALCULATED DISTANCE APART: -1693965 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#86 -> -71866 <- tig#132, B=280231 nt (start:223032, end:223053) A=34686 nt (start:34667, end:34646) CALCULATED DISTANCE APART: -71866 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#136 -> -62840 <- tig#132, B=49085 nt (start:912, end:933) A=34686 nt (start:34667, end:34646) CALCULATED DISTANCE APART: -62840 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.84 -> -211490 <- tig#132, B=197079 nt (start:196823, end:196802) A=34686 nt (start:34667, end:34646) CALCULATED DISTANCE APART: -211490 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#135 -> -196097 <- tig#r.6, A=39094 nt (start:37596, end:37617) B=6870868 nt (start:6656269, end:6656290) CALCULATED DISTANCE APART: -196097 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -214292 <- tig#6, A=354284 nt (start:133470, end:133491) B=6870868 nt (start:13478, end:13457) CALCULATED DISTANCE APART: -214292 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282847, end:282868) B=2196 nt (start:1028, end:1007) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AACTAAAAGTAGCATAAACTC - TTTTTTCATTAGAGACATTAT) on contig 7 (3534247 nt) Astart:2256832 Aend:2256811 Bstart:2237953 Bend:2237932 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#56 -> -1119990 <- tig#22, B=262460 nt (start:154678, end:154699) A=1636463 nt (start:1032208, end:1032187) CALCULATED DISTANCE APART: -1119990 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TGTTTAATAACATAGGATATA - CGTTTACATTGTCTAATGAAC) on contig 21 (1811326 nt) Astart:154710 Aend:154689 Bstart:261430 Bend:261409 Pairs unsatisfied in pairing logic within a contig. Pair (ATGCTCGTTGTGCCGCCGACG - CTTGTCGTAGTTTCCGTACGT) on contig 15 (3712591 nt) Astart:1718388 Aend:1718409 Bstart:1729630 Bend:1729651 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -4201 <- tig#r.96, A=262460 nt (start:244346, end:244367) B=91302 nt (start:85215, end:85236) CALCULATED DISTANCE APART: -4201 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260672, end:2260693) B=356404 nt (start:342552, end:342573) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TGTTTGTTTCATCTCTACAAC - GACTCTATCATATAACTATAA) on contig 19 (3531543 nt) Astart:3060326 Aend:3060305 Bstart:3048397 Bend:3048376 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#184 -> -354349 <- tig#r.46, A=9859 nt (start:1442, end:1463) B=577887 nt (start:211955, end:211976) CALCULATED DISTANCE APART: -354349 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTAATTCACAACTCAACTAAT - AAACTTTGCGCTGTTGAAACT) on contig 2 (5014909 nt) Astart:1268796 Aend:1268817 Bstart:1283458 Bend:1283437 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#103 -> -188044 <- tig#521, A=211876 nt (start:4814, end:4835) B=1100 nt (start:982, end:961) CALCULATED DISTANCE APART: -188044 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#95 -> -24340 <- tig#49, B=92653 nt (start:92469, end:92490) A=399963 nt (start:44156, end:44135) CALCULATED DISTANCE APART: -24340 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.92 -> -129973 <- tig#11, B=101136 nt (start:2800, end:2779) A=4628067 nt (start:147173, end:147152) CALCULATED DISTANCE APART: -129973 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATGGTAACTGGTGAAAATCAA - ACACGTGACACCAGACCAAGG) on contig 4 (3837743 nt) Astart:2357901 Aend:2357922 Bstart:2360161 Bend:2360182 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#81 -> -3898 <- tig#189, A=258617 nt (start:241494, end:241515) B=7795 nt (start:6775, end:6754) CALCULATED DISTANCE APART: -3898 < -2000 Pairs unsatisfied in distance within a contig. Pair (GGTCAAATACTTTCCATTTAT - TGGATGACGATCAAATTATGG) on contig 15 (3712591 nt) Astart:2102523 Aend:2102502 Bstart:2055732 Bend:2055753 CALCULATED DISTANCE APART: 46791 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#9 -> -3369808 <- tig#22, A=3747885 nt (start:358118, end:358139) B=1636463 nt (start:41, end:20) CALCULATED DISTANCE APART: -3369808 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -621133 <- tig#r.66, A=2766197 nt (start:2129643, end:2129664) B=201913 nt (start:197334, end:197355) CALCULATED DISTANCE APART: -621133 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#26 -> -90650 <- tig#95, B=1332708 nt (start:1310558, end:1310579) A=92653 nt (start:88500, end:88479) CALCULATED DISTANCE APART: -90650 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTGAATTACTTCTTGAATCAT - TATGGGTTGTCATATGAGGTT) on contig 43 (1235946 nt) Astart:243671 Aend:243650 Bstart:226261 Bend:226282 CALCULATED DISTANCE APART: 17410 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082747, end:2082768) B=976128 nt (start:960775, end:960796) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CGATGGGACCATTGTACTATA - AGAGTTTATGATGAGAGAACT) on contig 15 (3712591 nt) Astart:1717958 Aend:1717979 Bstart:1730060 Bend:1730081 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.22 -> -401002 <- tig#12, B=1636463 nt (start:338488, end:338467) A=2766197 nt (start:82514, end:82493) CALCULATED DISTANCE APART: -401002 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#10 -> -2925315 <- tig#9, A=3047199 nt (start:251219, end:251240) B=3747885 nt (start:149335, end:149314) CALCULATED DISTANCE APART: -2925315 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730777, end:730798) B=3531543 nt (start:3200351, end:3200330) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282827, end:282848) B=2196 nt (start:1008, end:987) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#433 -> -944078 <- tig#r.29, A=1238 nt (start:696, end:717) B=1463708 nt (start:500172, end:500193) CALCULATED DISTANCE APART: -944078 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#48 -> -123655 <- tig#r.84, A=487359 nt (start:470335, end:470356) B=197079 nt (start:70448, end:70469) CALCULATED DISTANCE APART: -123655 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTCAGGGAAACAGAATCGATG - CAGCTCCTTCTGTTGTGTGAT) on contig 41 (667251 nt) Astart:88748 Aend:88727 Bstart:76068 Bend:76089 CALCULATED DISTANCE APART: 12680 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730802, end:730823) B=3531543 nt (start:3200376, end:3200355) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728913, end:728934) A=1096 nt (start:998, end:977) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTGGAATGAGATGTGATTGGC - ACATTCTGGTAGAACTATTTC) on contig 37 (853709 nt) Astart:838824 Aend:838803 Bstart:823319 Bend:823340 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#54 -> -661574 <- tig#95, B=625914 nt (start:36914, end:36935) A=92653 nt (start:92574, end:92553) CALCULATED DISTANCE APART: -661574 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185869, end:4185848) A=3712591 nt (start:692, end:671) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460339, end:460318) A=1345436 nt (start:25321, end:25300) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#67 -> -163343 <- tig#51, B=197815 nt (start:180350, end:180371) A=875428 nt (start:165878, end:165857) CALCULATED DISTANCE APART: -163343 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#106 -> -140959 <- tig#71, B=117163 nt (start:27771, end:27792) A=271268 nt (start:71567, end:71546) CALCULATED DISTANCE APART: -140959 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:729887, end:729908) B=3531543 nt (start:3199461, end:3199440) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#19 -> -9908551 <- tig#6, A=3531543 nt (start:469436, end:469457) B=6870868 nt (start:6866444, end:6866423) CALCULATED DISTANCE APART: -9908551 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#98 -> -8012 <- tig#161, B=88184 nt (start:68314, end:68335) A=15506 nt (start:8142, end:8121) CALCULATED DISTANCE APART: -8012 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -418494 <- tig#46, A=736718 nt (start:457962, end:457983) B=577887 nt (start:159738, end:159717) CALCULATED DISTANCE APART: -418494 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTTTACTCTGGATAATGATAG - TGGGTTTGGGCCTTGAAACTC) on contig 30 (1050452 nt) Astart:648494 Aend:648515 Bstart:673528 Bend:673507 CALCULATED DISTANCE APART: 25034 Pairs unsatisfied in pairing logic within a contig. Pair (TCTTTGAAAGAAATGGTTTGA - CTCGTAGTACTATTGAGTCGC) on contig 19 (3531543 nt) Astart:3060236 Aend:3060215 Bstart:3048487 Bend:3048466 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730597, end:730618) B=3531543 nt (start:3200171, end:3200150) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#47 -> -347212 <- tig#53, A=471458 nt (start:285518, end:285539) B=354284 nt (start:181272, end:181251) CALCULATED DISTANCE APART: -347212 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282327, end:282348) B=2196 nt (start:508, end:487) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGAACCTTTTTCAGTTTCTCG - GAGAGCCAAGATTCCATATCT) on contig 15 (3712591 nt) Astart:3352377 Aend:3352398 Bstart:3377363 Bend:3377342 CALCULATED DISTANCE APART: 24986 Pairs unsatisfied in distance within a contig. Pair (TTAGAAACCTATTCACTACTC - TAATTCCCAATCTTGAAGCAT) on contig 123 (42452 nt) Astart:14666 Aend:14645 Bstart:1534 Bend:1555 CALCULATED DISTANCE APART: 13132 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.364 -> -57406 <- tig#98, B=1417 nt (start:1413, end:1392) A=88184 nt (start:75993, end:75972) CALCULATED DISTANCE APART: -57406 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459769, end:459748) A=1345436 nt (start:25891, end:25870) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16940, end:16919) A=1227811 nt (start:6875, end:6854) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.409 -> -1019852 <- tig#23, B=1303 nt (start:556, end:535) A=1345436 nt (start:1039296, end:1039275) CALCULATED DISTANCE APART: -1019852 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219221, end:4219200) A=2598 nt (start:2400, end:2379) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -2461734 <- tig#10, A=736718 nt (start:310698, end:310719) B=3047199 nt (start:2055714, end:2055693) CALCULATED DISTANCE APART: -2461734 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#34 -> -3900848 <- tig#r.11, A=1705564 nt (start:54547, end:54568) B=4628067 nt (start:2358236, end:2358257) CALCULATED DISTANCE APART: -3900848 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16295, end:16274) A=1227811 nt (start:7520, end:7499) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CTCAATAATACACATGACATC - TTTAATAAAGATGCAGAAGCA) on contig 261 (1974 nt) Astart:72 Aend:51 Bstart:1416 Bend:1437 Pairs unsatisfied in distance within a contig. Pair (AGCCGCCGGCTTTGGTTTGGT - AGAAGAGGAATGAGGCAATAA) on contig 15 (3712591 nt) Astart:3349955 Aend:3349976 Bstart:3374943 Bend:3374922 CALCULATED DISTANCE APART: 24988 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2375, end:2396) A=258385 nt (start:911, end:890) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.47 -> -199625 <- tig#2, B=471458 nt (start:121574, end:121553) A=5014909 nt (start:98051, end:98030) CALCULATED DISTANCE APART: -199625 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#52 -> -353986 <- tig#1, B=356404 nt (start:29, end:50) A=4853111 nt (start:17611, end:17590) CALCULATED DISTANCE APART: -353986 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTACTCAGACGTCATTGTAGA - GATGTAGTACAGCTCTAATTC) on contig 123 (42452 nt) Astart:14651 Aend:14630 Bstart:1519 Bend:1540 CALCULATED DISTANCE APART: 13132 Pairs unsatisfied in distance within a contig. Pair (TCTTTTCTAAAAATCTGAACA - CAGTTGAATGTCGAGATTAAG) on contig 41 (667251 nt) Astart:89013 Aend:88992 Bstart:76333 Bend:76354 CALCULATED DISTANCE APART: 12680 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#127 -> -57440 <- tig#17, B=80830 nt (start:63135, end:63156) A=1959065 nt (start:59745, end:59724) CALCULATED DISTANCE APART: -57440 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259317, end:2259338) B=356404 nt (start:343907, end:343928) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#37 -> -483032 <- tig#38, A=853709 nt (start:537917, end:537938) B=1143067 nt (start:187240, end:187219) CALCULATED DISTANCE APART: -483032 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728498, end:728519) A=1096 nt (start:583, end:562) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#11 -> -4076238 <- tig#r.1, A=4628067 nt (start:1331666, end:1331687) B=4853111 nt (start:4053274, end:4053295) CALCULATED DISTANCE APART: -4076238 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730127, end:730148) B=3531543 nt (start:3199701, end:3199680) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219156, end:4219135) A=2598 nt (start:2465, end:2444) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#31 -> -496426 <- tig#41, B=976128 nt (start:946440, end:946461) A=667251 nt (start:486738, end:486717) CALCULATED DISTANCE APART: -496426 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#156 -> -5497 <- tig#r.7, A=17231 nt (start:574, end:595) B=3534247 nt (start:3525407, end:3525428) CALCULATED DISTANCE APART: -5497 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#283 -> -3818458 <- tig#2, A=1768 nt (start:653, end:674) B=5014909 nt (start:3837343, end:3837322) CALCULATED DISTANCE APART: -3818458 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3583 <- tig#26, B=1171658 nt (start:1171483, end:1171504) A=1332708 nt (start:23408, end:23387) CALCULATED DISTANCE APART: -3583 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#33 -> -492044 <- tig#32, A=1290487 nt (start:1235692, end:1235713) B=972151 nt (start:457249, end:457228) CALCULATED DISTANCE APART: -492044 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728618, end:728639) A=1096 nt (start:703, end:682) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATCATAAAAATCTTTGAAAGA - TATTGAGTCGCTCGAAAATAT) on contig 19 (3531543 nt) Astart:3060246 Aend:3060225 Bstart:3048477 Bend:3048456 Pairs unsatisfied in distance within a contig. Pair (TGTTAATGGTTTAAAGTTTCG - GATACTAAGTTTCTTAGTCAC) on contig 30 (1050452 nt) Astart:649614 Aend:649635 Bstart:665380 Bend:665359 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in distance within a contig. Pair (ATCCGATTTCTGAATGTCAAC - TGAGATTCATTTATCACCATA) on contig 5 (3689108 nt) Astart:1171812 Aend:1171833 Bstart:1186948 Bend:1186927 CALCULATED DISTANCE APART: 15136 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6228 <- tig#57, B=27696 nt (start:1494, end:1515) A=258385 nt (start:26, end:5) CALCULATED DISTANCE APART: -6228 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.257 -> -2902765 <- tig#8, B=1995 nt (start:1701, end:1680) A=5070776 nt (start:2921064, end:2921043) CALCULATED DISTANCE APART: -2902765 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GGACTCGTCAATTTCTACTTT - ATCTTATCACGGAAGAAGACT) on contig 3 (3889482 nt) Astart:2808558 Aend:2808537 Bstart:2767900 Bend:2767879 Pairs unsatisfied in distance within a contig. Pair (CGTGGAGAGGAAGACGGCGGT - AAGAAGACATTAGCCTTCAGG) on contig 37 (853709 nt) Astart:838989 Aend:838968 Bstart:823484 Bend:823505 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in distance within a contig. Pair (TACTGACTTATTGTTCTGTTA - ATCGACATCTCTGTTGTGTCG) on contig 41 (667251 nt) Astart:88408 Aend:88387 Bstart:75728 Bend:75749 CALCULATED DISTANCE APART: 12680 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185714, end:4185693) A=3712591 nt (start:847, end:826) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2485, end:2506) A=258385 nt (start:1021, end:1000) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -40662 <- tig#443, A=736718 nt (start:677066, end:677087) B=1213 nt (start:1010, end:989) CALCULATED DISTANCE APART: -40662 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTACATTATCCAAAGCTCAAT - ATGTGTTTAAATATGTTTTTA) on contig 10 (3047199 nt) Astart:790194 Aend:790173 Bstart:766454 Bend:766475 CALCULATED DISTANCE APART: 23740 Pairs unsatisfied in distance within a contig. Pair (AAGACGGCGGTGAGGAGAAGG - CCAAATCCAAAAGAAGACATT) on contig 37 (853709 nt) Astart:838979 Aend:838958 Bstart:823474 Bend:823495 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2010, end:2031) A=258385 nt (start:546, end:525) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.38 -> -1310006 <- tig#33, B=1143067 nt (start:1039219, end:1039198) A=1290487 nt (start:290787, end:290766) CALCULATED DISTANCE APART: -1310006 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16145, end:16124) A=1227811 nt (start:7670, end:7649) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGAATGGCCACAGGACTCATT - TTTGAGACTATTCACATATAA) on contig 19 (3531543 nt) Astart:3058963 Aend:3058942 Bstart:3049757 Bend:3049736 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:458754, end:458733) A=1345436 nt (start:26906, end:26885) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17340, end:17319) A=1227811 nt (start:6475, end:6454) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#10 -> -2964281 <- tig#103, B=3047199 nt (start:260905, end:260926) A=211876 nt (start:197987, end:197966) CALCULATED DISTANCE APART: -2964281 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10313, end:10292) A=2766197 nt (start:2151250, end:2151229) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGCTTGTGAGCTCTTCTTCTT - TAGGTATGATTGGTAATTTTT) on contig 5 (3689108 nt) Astart:1170037 Aend:1170058 Bstart:1185172 Bend:1185151 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig. Pair (TGACAAAAGCGTAGCCAGCTA - TAAACTGATACCACCAGAGTG) on contig 27 (1227811 nt) Astart:434655 Aend:434676 Bstart:450908 Bend:450887 CALCULATED DISTANCE APART: 16253 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#98 -> -8012 <- tig#161, B=88184 nt (start:68309, end:68330) A=15506 nt (start:8137, end:8116) CALCULATED DISTANCE APART: -8012 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.32 -> -889372 <- tig#17, B=972151 nt (start:418913, end:418892) A=1959065 nt (start:490459, end:490438) CALCULATED DISTANCE APART: -889372 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.38 -> -1489351 <- tig#41, B=1143067 nt (start:1037369, end:1037348) A=667251 nt (start:471982, end:471961) CALCULATED DISTANCE APART: -1489351 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCCTAAGTTTCAACAAATGGT - GTCGGACAGTGTCATGATGAA) on contig 2 (5014909 nt) Astart:1269981 Aend:1270002 Bstart:1284643 Bend:1284622 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -1168778 <- tig#384, A=5070776 nt (start:3882150, end:3882171) B=1359 nt (start:152, end:131) CALCULATED DISTANCE APART: -1168778 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.43 -> -2679942 <- tig#7, B=1235946 nt (start:445235, end:445214) A=3534247 nt (start:2254707, end:2254686) CALCULATED DISTANCE APART: -2679942 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17585, end:17564) A=1227811 nt (start:6230, end:6209) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219471, end:4219450) A=2598 nt (start:2150, end:2129) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#46 -> -3144174 <- tig#12, B=577887 nt (start:138282, end:138303) A=2766197 nt (start:2724569, end:2724548) CALCULATED DISTANCE APART: -3144174 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#47 -> -293192 <- tig#6, A=471458 nt (start:171144, end:171165) B=6870868 nt (start:12878, end:12857) CALCULATED DISTANCE APART: -293192 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730352, end:730373) B=3531543 nt (start:3199926, end:3199905) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATCAGTGGCTTTTCACCGACT - TCAGTCACTATCACCAACCAC) on contig 1 (4853111 nt) Astart:346045 Aend:346066 Bstart:391322 Bend:391301 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#57 -> -246884 <- tig#r.177, A=258385 nt (start:1915, end:1936) B=11085 nt (start:671, end:692) CALCULATED DISTANCE APART: -246884 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -1168778 <- tig#384, A=5070776 nt (start:3883100, end:3883121) B=1359 nt (start:1102, end:1081) CALCULATED DISTANCE APART: -1168778 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.53 -> -239244 <- tig#95, B=354284 nt (start:166659, end:166638) A=92653 nt (start:92585, end:92564) CALCULATED DISTANCE APART: -239244 < -2000 Pairs unsatisfied in distance within a contig. Pair (GGAGTGGTCGAGGATTTGTCG - CTCGACCACTCCTCGTCCTGG) on contig 95 (92653 nt) Astart:92585 Aend:92564 Bstart:92388 Bend:92409 CALCULATED DISTANCE APART: 197 Pairs unsatisfied in pairing logic within a contig. Pair (AGGAAAATCTGGTGGCGGAGG - TTATTATTCGATCCACATATA) on contig 15 (3712591 nt) Astart:1718533 Aend:1718554 Bstart:1729485 Bend:1729506 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#305 -> -2202335 <- tig#r.19, A=1638 nt (start:342, end:363) B=3531543 nt (start:1310504, end:1310525) CALCULATED DISTANCE APART: -2202335 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10718, end:10697) A=2766197 nt (start:2150845, end:2150824) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -4201 <- tig#r.96, A=262460 nt (start:244246, end:244267) B=91302 nt (start:85315, end:85336) CALCULATED DISTANCE APART: -4201 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:1695, end:1716) A=258385 nt (start:231, end:210) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig. Pair (GAACGCCATCTCGTTAACAAG - AGCGAATAATAATTTTTAGAT) on contig 5 (3689108 nt) Astart:1171872 Aend:1171893 Bstart:1187008 Bend:1186987 CALCULATED DISTANCE APART: 15136 Pairs unsatisfied in pairing logic within a contig. Pair (TTTCATGTTTAATAACATAGG - ACATTGTCTAATGAACATTTG) on contig 21 (1811326 nt) Astart:154715 Aend:154694 Bstart:261425 Bend:261404 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#119 -> -7707 <- tig#r.49, A=46878 nt (start:31810, end:31831) B=399963 nt (start:387324, end:387345) CALCULATED DISTANCE APART: -7707 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2290, end:2311) A=258385 nt (start:826, end:805) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259717, end:2259738) B=356404 nt (start:343507, end:343528) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TACATAATATTAGATATAAGT - ACCGATGCGAAATATCCCGAC) on contig 131 (36503 nt) Astart:18379 Aend:18400 Bstart:13857 Bend:13878 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259267, end:2259288) B=356404 nt (start:343957, end:343978) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260417, end:2260438) B=356404 nt (start:342807, end:342828) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#46 -> -82984 <- tig#r.53, A=577887 nt (start:566665, end:566686) B=354284 nt (start:262522, end:262543) CALCULATED DISTANCE APART: -82984 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.91 -> -51116 <- tig#31, B=101959 nt (start:16525, end:16504) A=976128 nt (start:54591, end:54570) CALCULATED DISTANCE APART: -51116 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#87 -> -31255 <- tig#122, A=109083 nt (start:73625, end:73646) B=43035 nt (start:15797, end:15776) CALCULATED DISTANCE APART: -31255 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#48 -> -3151835 <- tig#12, B=487359 nt (start:39473, end:39494) A=2766197 nt (start:2723949, end:2723928) CALCULATED DISTANCE APART: -3151835 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#129 -> -345014 <- tig#53, A=39603 nt (start:377, end:398) B=354284 nt (start:325788, end:325767) CALCULATED DISTANCE APART: -345014 < -2000 Pairs unsatisfied in distance within a contig. Pair (CATGCTATATACATATTTTAA - AACTTTCACTTACCAATAACT) on contig 34 (1705564 nt) Astart:679544 Aend:679523 Bstart:664581 Bend:664602 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:461004, end:460983) A=1345436 nt (start:24656, end:24635) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219271, end:4219250) A=2598 nt (start:2350, end:2329) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460434, end:460413) A=1345436 nt (start:25226, end:25205) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#48 -> -156052 <- tig#51, B=487359 nt (start:406286, end:406307) A=875428 nt (start:94979, end:94958) CALCULATED DISTANCE APART: -156052 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CAACTTTTCTGAAAAACCAGT - GAAAGAAAGTAAATCAATGAT) on contig 4 (3837743 nt) Astart:2358381 Aend:2358402 Bstart:2359681 Bend:2359702 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -3661475 <- tig#r.3, A=262460 nt (start:68591, end:68612) B=3889482 nt (start:401876, end:401897) CALCULATED DISTANCE APART: -3661475 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -3661476 <- tig#r.3, A=262460 nt (start:68591, end:68612) B=3889482 nt (start:401875, end:401896) CALCULATED DISTANCE APART: -3661476 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#433 -> -944078 <- tig#r.29, A=1238 nt (start:806, end:827) B=1463708 nt (start:500062, end:500083) CALCULATED DISTANCE APART: -944078 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#433 -> -944078 <- tig#r.29, A=1238 nt (start:646, end:667) B=1463708 nt (start:500222, end:500243) CALCULATED DISTANCE APART: -944078 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#10 -> -2938378 <- tig#20, A=3047199 nt (start:2380358, end:2380379) B=2328057 nt (start:2291537, end:2291516) CALCULATED DISTANCE APART: -2938378 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#39 -> -500696 <- tig#r.30, A=736718 nt (start:679361, end:679382) B=1050452 nt (start:587113, end:587134) CALCULATED DISTANCE APART: -500696 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.48 -> -46561 <- tig#26, B=487359 nt (start:18893, end:18872) A=1332708 nt (start:47668, end:47647) CALCULATED DISTANCE APART: -46561 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#131 -> -42653 <- tig#r.34, A=36503 nt (start:137, end:158) B=1705564 nt (start:1679277, end:1679298) CALCULATED DISTANCE APART: -42653 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#73 -> -397247 <- tig#43, A=171056 nt (start:19306, end:19327) B=1235946 nt (start:265497, end:265476) CALCULATED DISTANCE APART: -397247 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AATCAATTAGTACAAGTCATG - CAATAATAATGTGAAAATGCT) on contig 19 (3531543 nt) Astart:3058423 Aend:3058402 Bstart:3050297 Bend:3050276 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#51 -> -548580 <- tig#79, B=875428 nt (start:390806, end:390827) A=136600 nt (start:83958, end:83937) CALCULATED DISTANCE APART: -548580 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTGTAAATATGACTATTTGAT - CATTTGAAGTGGAAAGAACTA) on contig 6 (6870868 nt) Astart:1138104 Aend:1138083 Bstart:1129677 Bend:1129698 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730937, end:730958) B=3531543 nt (start:3200511, end:3200490) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#25 -> -240819 <- tig#r.114, A=1290536 nt (start:1051215, end:1051236) B=54818 nt (start:33320, end:33341) CALCULATED DISTANCE APART: -240819 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AAGAAGGAAATAGTAGTTATA - TTCTCATAAGCTTTTTATTAA) on contig 15 (3712591 nt) Astart:1719423 Aend:1719444 Bstart:1728595 Bend:1728616 Pairs unsatisfied in distance within a contig. Pair (TATGGCCTACGGATTTTATGC - TGGTTATCCCATTGCGAGAGG) on contig 27 (1227811 nt) Astart:434465 Aend:434486 Bstart:450718 Bend:450697 CALCULATED DISTANCE APART: 16253 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728183, end:728204) A=1096 nt (start:268, end:247) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.15 -> -3863647 <- tig#1, B=3712591 nt (start:1966302, end:1966281) A=4853111 nt (start:1917345, end:1917324) CALCULATED DISTANCE APART: -3863647 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AATCTGGTGGCGGAGGAGCCA - CTCGTTTATTATTCGATCCAC) on contig 15 (3712591 nt) Astart:1718538 Aend:1718559 Bstart:1729480 Bend:1729501 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#64 -> -210549 <- tig#109, B=211265 nt (start:467, end:488) A=66564 nt (start:19751, end:19730) CALCULATED DISTANCE APART: -210549 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#62 -> -137494 <- tig#140, A=354710 nt (start:208446, end:208467) B=26310 nt (start:11230, end:11209) CALCULATED DISTANCE APART: -137494 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260627, end:2260648) B=356404 nt (start:342597, end:342618) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#1 -> -3446286 <- tig#31, B=4853111 nt (start:1819939, end:1819960) A=976128 nt (start:433114, end:433093) CALCULATED DISTANCE APART: -3446286 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#127 -> -57440 <- tig#17, B=80830 nt (start:63110, end:63131) A=1959065 nt (start:59720, end:59699) CALCULATED DISTANCE APART: -57440 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#5 -> -3530926 <- tig#7, B=3689108 nt (start:1663632, end:1663653) A=3534247 nt (start:1525450, end:1525429) CALCULATED DISTANCE APART: -3530926 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#47 -> -4008935 <- tig#9, B=471458 nt (start:177161, end:177182) A=3747885 nt (start:3734638, end:3734617) CALCULATED DISTANCE APART: -4008935 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -214292 <- tig#6, A=354284 nt (start:133980, end:134001) B=6870868 nt (start:13988, end:13967) CALCULATED DISTANCE APART: -214292 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#85 -> -58882 <- tig#140, A=121353 nt (start:50658, end:50679) B=26310 nt (start:8187, end:8166) CALCULATED DISTANCE APART: -58882 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#48 -> -74639 <- tig#r.90, A=487359 nt (start:470275, end:470296) B=112304 nt (start:34749, end:34770) CALCULATED DISTANCE APART: -74639 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.47 -> -199625 <- tig#2, B=471458 nt (start:121744, end:121723) A=5014909 nt (start:97881, end:97860) CALCULATED DISTANCE APART: -199625 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTCTTGAATGTTCTAGTTACT - AAATGCCTTCTTCTTTCGGGT) on contig 5 (3689108 nt) Astart:1170137 Aend:1170158 Bstart:1185272 Bend:1185251 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig. Pair (TATTTATTGTGAATTTGTGTG - TTGAAGGGCCAGCAGAAACTT) on contig 30 (1050452 nt) Astart:650344 Aend:650365 Bstart:666110 Bend:666089 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in distance within a contig. Pair (TTTACATATAATTCGTTTGTG - TCAAGTTCGTCAATGCGTTTT) on contig 37 (853709 nt) Astart:838749 Aend:838728 Bstart:823244 Bend:823265 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#19 -> -1649636 <- tig#31, A=3531543 nt (start:1878177, end:1878198) B=976128 nt (start:16270, end:16249) CALCULATED DISTANCE APART: -1649636 < -2000 Pairs unsatisfied in distance within a contig. Pair (AATTCACTTCCAAAGCTCTAG - ATGTCACAAGTAAGAAGCTGT) on contig 6 (6870868 nt) Astart:1138434 Aend:1138413 Bstart:1130007 Bend:1130028 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in pairing logic within a contig. Pair (TTTTTTAATTATTATAATAAG - CCTTTATTGCTCCCAAATCCA) on contig 19 (3531543 nt) Astart:3059901 Aend:3059880 Bstart:3048822 Bend:3048801 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136283, end:136304) B=15068 nt (start:1393, end:1414) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GATTAATCATGACCCTAGTAT - AATAAAAGACGTGTGGGACGG) on contig 19 (3531543 nt) Astart:3058643 Aend:3058622 Bstart:3050077 Bend:3050056 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#11 -> -5298498 <- tig#r.19, A=4628067 nt (start:147058, end:147079) B=3531543 nt (start:2694054, end:2694075) CALCULATED DISTANCE APART: -5298498 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#129 -> -1360805 <- tig#r.23, A=39603 nt (start:32, end:53) B=1345436 nt (start:4202, end:4223) CALCULATED DISTANCE APART: -1360805 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#129 -> -1698869 <- tig#34, A=39603 nt (start:32, end:53) B=1705564 nt (start:1679298, end:1679277) CALCULATED DISTANCE APART: -1698869 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#129 -> -19611 <- tig#r.132, A=39603 nt (start:32, end:53) B=34686 nt (start:34646, end:34667) CALCULATED DISTANCE APART: -19611 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#48 -> -3151835 <- tig#12, B=487359 nt (start:39483, end:39504) A=2766197 nt (start:2723959, end:2723938) CALCULATED DISTANCE APART: -3151835 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33824, end:33803) A=855454 nt (start:18625, end:18604) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTAATATATATCTTAGACTTC - AGTACTTTCCAACAGTGGCTG) on contig 15 (3712591 nt) Astart:1717718 Aend:1717739 Bstart:1730300 Bend:1730321 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#13 -> -4698233 <- tig#19, A=2650694 nt (start:456614, end:456635) B=3531543 nt (start:2524153, end:2524132) CALCULATED DISTANCE APART: -4698233 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATATAGAGAGATTGATGACAT - GATGTAACTAAAAAACAGCAA) on contig 19 (3531543 nt) Astart:3058873 Aend:3058852 Bstart:3049847 Bend:3049826 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#14 -> -765455 <- tig#43, B=2271162 nt (start:2083019, end:2083040) A=1235946 nt (start:597312, end:597291) CALCULATED DISTANCE APART: -765455 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#453 -> -16426 <- tig#68, A=1197 nt (start:1099, end:1120) B=189499 nt (start:36328, end:36307) CALCULATED DISTANCE APART: -16426 < -2000 Pairs unsatisfied in distance within a contig. Pair (AACCAGAATAAAAGGTAGAAT - TAATATTAGACCAATATTTTC) on contig 13 (2650694 nt) Astart:1947305 Aend:1947326 Bstart:1962953 Bend:1962932 CALCULATED DISTANCE APART: 15648 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33854, end:33833) A=855454 nt (start:18595, end:18574) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.15 -> -3863647 <- tig#1, B=3712591 nt (start:1966297, end:1966276) A=4853111 nt (start:1917350, end:1917329) CALCULATED DISTANCE APART: -3863647 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#38 -> -1215223 <- tig#78, B=1143067 nt (start:38500, end:38521) A=184063 nt (start:130656, end:130635) CALCULATED DISTANCE APART: -1215223 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136273, end:136294) B=15068 nt (start:1403, end:1424) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTGTGAGGTTTCAATCAATAA - GCAAGTTGAAGCAAAGTACCC) on contig 6 (6870868 nt) Astart:1138619 Aend:1138598 Bstart:1130164 Bend:1130185 CALCULATED DISTANCE APART: 8455 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:11961, end:11940) A=91302 nt (start:12232, end:12211) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -4201 <- tig#r.96, A=262460 nt (start:244506, end:244527) B=91302 nt (start:85055, end:85076) CALCULATED DISTANCE APART: -4201 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -5676333 <- tig#33, B=5070776 nt (start:4594095, end:4594074) A=1290487 nt (start:1102238, end:1102217) CALCULATED DISTANCE APART: -5676333 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259187, end:2259208) B=356404 nt (start:344037, end:344058) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTCCATGGCTCCATCTCTCTA - ATTCCTACTTATTCAGAGAGA) on contig 1 (4853111 nt) Astart:346105 Aend:346126 Bstart:391382 Bend:391361 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in pairing logic within a contig. Pair (GAAGTCGAGAAGTCAAGAAAC - TGGCTCCGTATTTTCCTCTTC) on contig 19 (3531543 nt) Astart:3059436 Aend:3059415 Bstart:3049287 Bend:3049266 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#64 -> -218030 <- tig#r.139, A=211265 nt (start:7, end:28) B=27696 nt (start:924, end:945) CALCULATED DISTANCE APART: -218030 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.53 -> -305966 <- tig#131, B=354284 nt (start:325802, end:325781) A=36503 nt (start:164, end:143) CALCULATED DISTANCE APART: -305966 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728128, end:728149) A=1096 nt (start:213, end:192) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -322558 <- tig#r.572, A=2650694 nt (start:2308620, end:2308641) B=1031 nt (start:547, end:568) CALCULATED DISTANCE APART: -322558 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2645, end:2666) A=258385 nt (start:1181, end:1160) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTTTGATATATTGAACTCATT - AACATCAAAAACGATAATAAA) on contig 19 (3531543 nt) Astart:3059381 Aend:3059360 Bstart:3049342 Bend:3049321 Pairs unsatisfied in distance within a contig. Pair (GGACAATAGAGAGAGATACTG - GGTCCATAGTTTCGGATAGAG) on contig 30 (1050452 nt) Astart:649634 Aend:649655 Bstart:665400 Bend:665379 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#49 -> -1152645 <- tig#r.43, A=399963 nt (start:351901, end:351922) B=1235946 nt (start:111363, end:111384) CALCULATED DISTANCE APART: -1152645 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#34 -> -1107967 <- tig#79, A=1705564 nt (start:661821, end:661842) B=136600 nt (start:84224, end:84203) CALCULATED DISTANCE APART: -1107967 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGGATATTTGAGATGGCTTGG - AAGCGACAACCATATCTACCG) on contig 5 (3689108 nt) Astart:1169787 Aend:1169808 Bstart:1184922 Bend:1184901 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#63 -> -330553 <- tig#78, B=274372 nt (start:54395, end:54416) A=184063 nt (start:130576, end:130555) CALCULATED DISTANCE APART: -330553 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATCTCTACAACTTGCACACAC - CATCGACTTGGACTCTATCAT) on contig 19 (3531543 nt) Astart:3060316 Aend:3060295 Bstart:3048407 Bend:3048386 Pairs unsatisfied in distance within a contig. Pair (ATCCATCGTATCCGACGTTGA - AGATCTCATATTTTAATCTTC) on contig 5 (3689108 nt) Astart:1171787 Aend:1171808 Bstart:1186923 Bend:1186902 CALCULATED DISTANCE APART: 15136 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#47 -> -583213 <- tig#r.69, A=471458 nt (start:10033, end:10054) B=186132 nt (start:44344, end:44365) CALCULATED DISTANCE APART: -583213 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GGCTTTTTCTTCAAGCCCAAA - ATCCAACAATTTCATATTTTC) on contig 19 (3531543 nt) Astart:3058733 Aend:3058712 Bstart:3049987 Bend:3049966 Pairs unsatisfied in distance within a contig. Pair (AGCAGGATGCCTTGGATCATT - GAGTGGTCTTAATTGGCATAT) on contig 5 (3689108 nt) Astart:1170217 Aend:1170238 Bstart:1185352 Bend:1185331 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig. Pair (TGAACGTTGACAGGGGGAGGT - TCAACCTTATCTAGCTACCAA) on contig 2 (5014909 nt) Astart:1269196 Aend:1269217 Bstart:1283858 Bend:1283837 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig. Pair (AGTATGTGTGTGTTGGCATTT - AAGATACTAGTATACAAGAAT) on contig 5 (3689108 nt) Astart:1178612 Aend:1178591 Bstart:1163478 Bend:1163499 CALCULATED DISTANCE APART: 15134 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#103 -> -259870 <- tig#r.48, A=211876 nt (start:14009, end:14030) B=487359 nt (start:405356, end:405377) CALCULATED DISTANCE APART: -259870 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GTTTACTATTTTGTCTGAGTC - AACAGACTTCTGTCACGTAAG) on contig 4 (3837743 nt) Astart:2358471 Aend:2358492 Bstart:2359591 Bend:2359612 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -418494 <- tig#46, A=736718 nt (start:457957, end:457978) B=577887 nt (start:159733, end:159712) CALCULATED DISTANCE APART: -418494 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3583 <- tig#26, B=1171658 nt (start:1171323, end:1171344) A=1332708 nt (start:23248, end:23227) CALCULATED DISTANCE APART: -3583 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#48 -> -91507 <- tig#r.67, A=487359 nt (start:470645, end:470666) B=197815 nt (start:103022, end:103043) CALCULATED DISTANCE APART: -91507 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#54 -> -868447 <- tig#30, A=625914 nt (start:324422, end:324443) B=1050452 nt (start:586955, end:586934) CALCULATED DISTANCE APART: -868447 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#7 -> -3853079 <- tig#36, A=3534247 nt (start:146109, end:146130) B=855454 nt (start:484941, end:484920) CALCULATED DISTANCE APART: -3853079 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AATCCGATCTTAAAAGCCTAA - AACAAGGATACAATTCTTACG) on contig 34 (1705564 nt) Astart:1685000 Aend:1685021 Bstart:1679305 Bend:1679284 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#34 -> -1107961 <- tig#79, A=1705564 nt (start:661451, end:661472) B=136600 nt (start:83848, end:83827) CALCULATED DISTANCE APART: -1107961 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#6 -> -1218062 <- tig#25, A=6870868 nt (start:6544980, end:6545001) B=1290536 nt (start:912174, end:912153) CALCULATED DISTANCE APART: -1218062 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -214279 <- tig#6, A=354284 nt (start:132683, end:132704) B=6870868 nt (start:12678, end:12657) CALCULATED DISTANCE APART: -214279 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#103 -> -87847 <- tig#r.125, A=211876 nt (start:104645, end:104666) B=54013 nt (start:53397, end:53418) CALCULATED DISTANCE APART: -87847 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#35 -> -903502 <- tig#r.142, A=1135475 nt (start:222717, end:222738) B=24988 nt (start:14244, end:14265) CALCULATED DISTANCE APART: -903502 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.46 -> -213331 <- tig#51, B=577887 nt (start:159963, end:159942) A=875428 nt (start:73368, end:73347) CALCULATED DISTANCE APART: -213331 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GAAATGTTATATGGTCACCAA - TTTCAGTTACCCAGCGGTCCT) on contig 19 (3531543 nt) Astart:3058313 Aend:3058292 Bstart:3050407 Bend:3050386 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728273, end:728294) A=1096 nt (start:358, end:337) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig. Pair (GAAAGAGAGGAAGAAAGCTGT - GCGAGTTTTCTTCGGATCGAC) on contig 1 (4853111 nt) Astart:346820 Aend:346841 Bstart:392097 Bend:392076 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17210, end:17189) A=1227811 nt (start:6605, end:6584) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#63 -> -501119 <- tig#r.5, A=274372 nt (start:183026, end:183047) B=3689108 nt (start:3259335, end:3259356) CALCULATED DISTANCE APART: -501119 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#12 -> -167604 <- tig#557, B=2766197 nt (start:2579424, end:2579445) A=1050 nt (start:831, end:810) CALCULATED DISTANCE APART: -167604 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460669, end:460648) A=1345436 nt (start:24991, end:24970) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CCTGCAAAATAGAAACAGAAC - CAGCCGTTTCAGTCGTCCAAT) on contig 4 (3837743 nt) Astart:2358321 Aend:2358342 Bstart:2359741 Bend:2359762 Pairs unsatisfied in distance within a contig. Pair (TTGGTAAAACTTGTTGTCTGC - ACATTTCATATATACACACTG) on contig 2 (5014909 nt) Astart:1268871 Aend:1268892 Bstart:1283533 Bend:1283512 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:458989, end:458968) A=1345436 nt (start:26671, end:26650) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#136 -> -33763 <- tig#143, B=49085 nt (start:910, end:931) A=24293 nt (start:5588, end:5567) CALCULATED DISTANCE APART: -33763 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.84 -> -399888 <- tig#86, B=197079 nt (start:196831, end:196810) A=280231 nt (start:223057, end:223036) CALCULATED DISTANCE APART: -399888 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTCTTCTTCGTGTACGAGTAG - TTCATGGCCTTGCAGGATTTT) on contig 30 (1050452 nt) Astart:650754 Aend:650775 Bstart:666520 Bend:666499 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#34 -> -5251284 <- tig#2, A=1705564 nt (start:270894, end:270915) B=5014909 nt (start:3836614, end:3836593) CALCULATED DISTANCE APART: -5251284 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -621133 <- tig#r.66, A=2766197 nt (start:2129328, end:2129349) B=201913 nt (start:197649, end:197670) CALCULATED DISTANCE APART: -621133 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -1335763 <- tig#4, B=3747885 nt (start:2857522, end:2857543) A=3837743 nt (start:465400, end:465379) CALCULATED DISTANCE APART: -1335763 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#11 -> -4878195 <- tig#29, A=4628067 nt (start:684236, end:684257) B=1463708 nt (start:954364, end:954343) CALCULATED DISTANCE APART: -4878195 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.103 -> -86798 <- tig#165, B=211876 nt (start:104657, end:104636) A=13843 nt (start:2141, end:2120) CALCULATED DISTANCE APART: -86798 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#46 -> -3144174 <- tig#12, B=577887 nt (start:138217, end:138238) A=2766197 nt (start:2724504, end:2724483) CALCULATED DISTANCE APART: -3144174 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259477, end:2259498) B=356404 nt (start:343747, end:343768) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATCTCCATATTTTTGGTGTCG - CAAGTAGTGTTTTTATTTTAT) on contig 34 (1705564 nt) Astart:679974 Aend:679953 Bstart:665011 Bend:665032 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460174, end:460153) A=1345436 nt (start:25486, end:25465) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.42 -> -1433157 <- tig#20, B=659641 nt (start:2253, end:2232) A=2328057 nt (start:1450904, end:1450883) CALCULATED DISTANCE APART: -1433157 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728228, end:728249) A=1096 nt (start:313, end:292) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#6 -> -40192 <- tig#91, A=6870868 nt (start:6826116, end:6826137) B=101959 nt (start:15440, end:15419) CALCULATED DISTANCE APART: -40192 < -2000 Pairs unsatisfied in distance within a contig. Pair (ACCACATCTAGCTGGACCATT - GATAACCAAAATCTCTTTCTT) on contig 34 (1705564 nt) Astart:679349 Aend:679328 Bstart:664386 Bend:664407 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260267, end:2260288) B=356404 nt (start:342957, end:342978) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#47 -> -398721 <- tig#140, A=471458 nt (start:64442, end:64463) B=26310 nt (start:11705, end:11684) CALCULATED DISTANCE APART: -398721 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGGGTTTTATGTGAGATTGGT - GCTAGAATTAATAGAATAAAA) on contig 5 (3689108 nt) Astart:1178287 Aend:1178266 Bstart:1163153 Bend:1163174 CALCULATED DISTANCE APART: 15134 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#46 -> -3144173 <- tig#12, B=577887 nt (start:138733, end:138754) A=2766197 nt (start:2725019, end:2724998) CALCULATED DISTANCE APART: -3144173 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12171, end:12150) A=91302 nt (start:12022, end:12001) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#74 -> -258226 <- tig#56, B=238371 nt (start:59021, end:59042) A=262460 nt (start:98876, end:98855) CALCULATED DISTANCE APART: -258226 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#5 -> -5721920 <- tig#3, B=3689108 nt (start:429871, end:429892) A=3889482 nt (start:2482683, end:2482662) CALCULATED DISTANCE APART: -5721920 < -2000 Pairs unsatisfied in distance within a contig. Pair (CAAGACGTCCTAGCACCTCTT - TGTTGAATTCATCAGAGCTGC) on contig 43 (1235946 nt) Astart:243911 Aend:243890 Bstart:226501 Bend:226522 CALCULATED DISTANCE APART: 17410 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -1168778 <- tig#384, A=5070776 nt (start:3882370, end:3882391) B=1359 nt (start:372, end:351) CALCULATED DISTANCE APART: -1168778 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#57 -> -3231864 <- tig#7, A=258385 nt (start:256014, end:256035) B=3534247 nt (start:3249493, end:3249472) CALCULATED DISTANCE APART: -3231864 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#33 -> -3182921 <- tig#3, B=1290487 nt (start:840729, end:840750) A=3889482 nt (start:2753163, end:2753142) CALCULATED DISTANCE APART: -3182921 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.81 -> -331163 <- tig#84, B=258617 nt (start:154344, end:154323) A=197079 nt (start:196819, end:196798) CALCULATED DISTANCE APART: -331163 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#305 -> -2202335 <- tig#r.19, A=1638 nt (start:197, end:218) B=3531543 nt (start:1310649, end:1310670) CALCULATED DISTANCE APART: -2202335 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.31 -> -71281 <- tig#98, B=976128 nt (start:17160, end:17139) A=88184 nt (start:74121, end:74100) CALCULATED DISTANCE APART: -71281 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#47 -> -583213 <- tig#r.69, A=471458 nt (start:9998, end:10019) B=186132 nt (start:44379, end:44400) CALCULATED DISTANCE APART: -583213 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -491503 <- tig#7, B=1171658 nt (start:875242, end:875263) A=3534247 nt (start:215087, end:215066) CALCULATED DISTANCE APART: -491503 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:134233, end:134254) B=15068 nt (start:3443, end:3464) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17580, end:17559) A=1227811 nt (start:6235, end:6214) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#7 -> -189847 <- tig#65, B=3534247 nt (start:3524807, end:3524828) A=286124 nt (start:200407, end:200386) CALCULATED DISTANCE APART: -189847 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGGACTTGAAGCATGTGAAGC - TGCATATTCGTCCATCAGTAA) on contig 2 (5014909 nt) Astart:1270106 Aend:1270127 Bstart:1284768 Bend:1284747 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in pairing logic within a contig. Pair (GGCTTGGCAAAGTAAGATTAT - TCAAAATGGGTCGGTTGGTGG) on contig 15 (3712591 nt) Astart:1717508 Aend:1717529 Bstart:1730510 Bend:1730531 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260592, end:2260613) B=356404 nt (start:342632, end:342653) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GAGAAATGAACAGCAGAAGAA - ATTTGGATCTTAGCCATAACC) on contig 7 (3534247 nt) Astart:2256672 Aend:2256651 Bstart:2238106 Bend:2238085 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#106 -> -1441975 <- tig#29, B=117163 nt (start:27381, end:27402) A=1463708 nt (start:1372193, end:1372172) CALCULATED DISTANCE APART: -1441975 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTGATGATTGATGTTACACTG - ATCTTCTGCTCAAAAACAGAA) on contig 1 (4853111 nt) Astart:345681 Aend:345702 Bstart:390947 Bend:390926 CALCULATED DISTANCE APART: 45266 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.38 -> -1310113 <- tig#33, B=1143067 nt (start:1039449, end:1039428) A=1290487 nt (start:290664, end:290643) CALCULATED DISTANCE APART: -1310113 < -2000 Pairs unsatisfied in distance within a contig. Pair (GAAGCCCAAGGCAACAACAAG - AAAATTTCACAGGACATGACT) on contig 6 (6870868 nt) Astart:1137804 Aend:1137783 Bstart:1129377 Bend:1129398 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#101 -> -2656718 <- tig#12, A=84691 nt (start:11240, end:11261) B=2766197 nt (start:2603267, end:2603246) CALCULATED DISTANCE APART: -2656718 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730612, end:730633) B=3531543 nt (start:3200186, end:3200165) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:281927, end:281948) B=2196 nt (start:108, end:87) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATAAAAAGGTTTTACTAATCA - TAACCACGTCGAAATAAGGTA) on contig 19 (3531543 nt) Astart:3058583 Aend:3058562 Bstart:3050137 Bend:3050116 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -214291 <- tig#6, A=354284 nt (start:133236, end:133257) B=6870868 nt (start:13243, end:13222) CALCULATED DISTANCE APART: -214291 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16945, end:16924) A=1227811 nt (start:6870, end:6849) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -621133 <- tig#r.66, A=2766197 nt (start:2129293, end:2129314) B=201913 nt (start:197684, end:197705) CALCULATED DISTANCE APART: -621133 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#47 -> -583213 <- tig#r.69, A=471458 nt (start:10003, end:10024) B=186132 nt (start:44374, end:44395) CALCULATED DISTANCE APART: -583213 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -40662 <- tig#443, A=736718 nt (start:676696, end:676717) B=1213 nt (start:640, end:619) CALCULATED DISTANCE APART: -40662 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135563, end:135584) B=15068 nt (start:2113, end:2134) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig. Pair (GTCACACTCTTCCCGATAAAA - CCTGCTTCAGCAGTTGATCAC) on contig 46 (577887 nt) Astart:183305 Aend:183326 Bstart:200755 Bend:200734 CALCULATED DISTANCE APART: 17450 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.58 -> -1866109 <- tig#19, B=374416 nt (start:13991, end:13970) A=3531543 nt (start:1872118, end:1872097) CALCULATED DISTANCE APART: -1866109 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#92 -> -6676 <- tig#r.139, A=101136 nt (start:101112, end:101133) B=27696 nt (start:1044, end:1065) CALCULATED DISTANCE APART: -6676 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#9 -> -3401512 <- tig#r.107, A=3747885 nt (start:358028, end:358049) B=68734 nt (start:37079, end:37100) CALCULATED DISTANCE APART: -3401512 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2261072, end:2261093) B=356404 nt (start:342152, end:342173) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#45 -> -598590 <- tig#r.14, A=528133 nt (start:162127, end:162148) B=2271162 nt (start:2018578, end:2018599) CALCULATED DISTANCE APART: -598590 < -2000 Pairs unsatisfied in distance within a contig. Pair (GAGTCTCCGTTACTTCTTAGA - AGACGGGTTTCTCTTCTATGA) on contig 30 (1050452 nt) Astart:650084 Aend:650105 Bstart:665850 Bend:665829 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#103 -> -259849 <- tig#r.48, A=211876 nt (start:14694, end:14715) B=487359 nt (start:404692, end:404713) CALCULATED DISTANCE APART: -259849 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#6 -> -3712398 <- tig#1, A=6870868 nt (start:5007537, end:5007558) B=4853111 nt (start:1869067, end:1869046) CALCULATED DISTANCE APART: -3712398 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12401, end:12380) A=91302 nt (start:11792, end:11771) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12081, end:12060) A=91302 nt (start:12112, end:12091) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#9 -> -6907516 <- tig#r.5, A=3747885 nt (start:149283, end:149304) B=3689108 nt (start:360194, end:360215) CALCULATED DISTANCE APART: -6907516 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282432, end:282453) B=2196 nt (start:613, end:592) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.12 -> -5702562 <- tig#7, B=2766197 nt (start:2222251, end:2222230) A=3534247 nt (start:3500311, end:3500290) CALCULATED DISTANCE APART: -5702562 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#12 -> -1284160 <- tig#25, A=2766197 nt (start:2563102, end:2563123) B=1290536 nt (start:1101065, end:1101044) CALCULATED DISTANCE APART: -1284160 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#11 -> -1263394 <- tig#3, B=4628067 nt (start:3649742, end:3649763) A=3889482 nt (start:305069, end:305048) CALCULATED DISTANCE APART: -1263394 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#14 -> -765455 <- tig#43, B=2271162 nt (start:2082919, end:2082940) A=1235946 nt (start:597212, end:597191) CALCULATED DISTANCE APART: -765455 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -8649 <- tig#320, A=354284 nt (start:325778, end:325799) B=1552 nt (start:143, end:122) CALCULATED DISTANCE APART: -8649 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -204612 <- tig#84, A=354284 nt (start:325778, end:325799) B=197079 nt (start:196106, end:196085) CALCULATED DISTANCE APART: -204612 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#74 -> -3692289 <- tig#7, B=238371 nt (start:26394, end:26415) A=3534247 nt (start:3500312, end:3500291) CALCULATED DISTANCE APART: -3692289 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -40662 <- tig#443, A=736718 nt (start:676411, end:676432) B=1213 nt (start:355, end:334) CALCULATED DISTANCE APART: -40662 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#22 -> -6369342 <- tig#6, B=1636463 nt (start:14455, end:14476) A=6870868 nt (start:4767334, end:4767313) CALCULATED DISTANCE APART: -6369342 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GAGGGCTAAAGTGGAACAATC - AATATCTGTTCAAAGAGTTCT) on contig 4 (3837743 nt) Astart:2358156 Aend:2358177 Bstart:2359906 Bend:2359927 Pairs unsatisfied in distance within a contig. Pair (GCAGTTTCGGAATCCTTTCAT - GTATGGGAGACGCTAGAGACA) on contig 6 (6870868 nt) Astart:4412899 Aend:4412920 Bstart:4446867 Bend:4446846 CALCULATED DISTANCE APART: 33968 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#433 -> -944078 <- tig#r.29, A=1238 nt (start:93, end:114) B=1463708 nt (start:500775, end:500796) CALCULATED DISTANCE APART: -944078 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CTTGTTAAAAAATATTCTATT - TGGCTTCCGAAATTGCAAGCT) on contig 19 (3531543 nt) Astart:3059781 Aend:3059760 Bstart:3048942 Bend:3048921 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3582 <- tig#26, B=1171658 nt (start:1170959, end:1170980) A=1332708 nt (start:22883, end:22862) CALCULATED DISTANCE APART: -3582 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#139 -> -6248 <- tig#57, A=27696 nt (start:8759, end:8780) B=258385 nt (start:7311, end:7290) CALCULATED DISTANCE APART: -6248 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGAGTCATCATCACCATCCTT - TAATTTGGCAGCTCACATGTT) on contig 37 (853709 nt) Astart:537782 Aend:537803 Bstart:550452 Bend:550431 CALCULATED DISTANCE APART: 12670 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.132 -> -39859 <- tig#167, B=34686 nt (start:34668, end:34647) A=25236 nt (start:25191, end:25170) CALCULATED DISTANCE APART: -39859 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#34 -> -31474 <- tig#167, B=1705564 nt (start:1679281, end:1679302) A=25236 nt (start:25191, end:25170) CALCULATED DISTANCE APART: -31474 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.139 -> -20703 <- tig#109, B=27696 nt (start:21677, end:21656) A=66564 nt (start:19026, end:19005) CALCULATED DISTANCE APART: -20703 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:134688, end:134709) B=15068 nt (start:2988, end:3009) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259147, end:2259168) B=356404 nt (start:344077, end:344098) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ACTGGAGAACAAGATATATTC - TGTCCTAATGAGAACTTGGAG) on contig 15 (3712591 nt) Astart:1717893 Aend:1717914 Bstart:1730125 Bend:1730146 Pairs unsatisfied in distance within a contig. Pair (GACAGTCATCTTATTTAAAGA - TTTATCTCCAAATTTTTATGG) on contig 5 (3689108 nt) Astart:1169337 Aend:1169358 Bstart:1184472 Bend:1184451 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#46 -> -523088 <- tig#r.48, A=577887 nt (start:135991, end:136012) B=487359 nt (start:386167, end:386188) CALCULATED DISTANCE APART: -523088 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185614, end:4185593) A=3712591 nt (start:947, end:926) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282987, end:283008) B=2196 nt (start:1168, end:1147) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:729892, end:729913) B=3531543 nt (start:3199466, end:3199445) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#414 -> -168814 <- tig#48, B=1291 nt (start:982, end:1003) A=487359 nt (start:188505, end:188484) CALCULATED DISTANCE APART: -168814 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.403 -> -2330792 <- tig#13, B=1321 nt (start:825, end:804) A=2650694 nt (start:2349967, end:2349946) CALCULATED DISTANCE APART: -2330792 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAACTAACTACTAAAGCAACA - GTATCCATGAAAATGATATAG) on contig 34 (1705564 nt) Astart:680134 Aend:680113 Bstart:665171 Bend:665192 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#49 -> -5102650 <- tig#6, B=399963 nt (start:43522, end:43543) A=6870868 nt (start:4766209, end:4766188) CALCULATED DISTANCE APART: -5102650 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -621133 <- tig#r.66, A=2766197 nt (start:2129723, end:2129744) B=201913 nt (start:197254, end:197275) CALCULATED DISTANCE APART: -621133 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#31 -> -848163 <- tig#43, B=976128 nt (start:231886, end:231907) A=1235946 nt (start:123921, end:123900) CALCULATED DISTANCE APART: -848163 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#129 -> -19665 <- tig#520, A=39603 nt (start:454, end:475) B=1101 nt (start:516, end:495) CALCULATED DISTANCE APART: -19665 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#453 -> -16426 <- tig#68, A=1197 nt (start:1089, end:1110) B=189499 nt (start:36318, end:36297) CALCULATED DISTANCE APART: -16426 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTAATCACTCCTAAACTAAAT - ATTACTATAAACTGTTTTATA) on contig 7 (3534247 nt) Astart:2257022 Aend:2257001 Bstart:2237755 Bend:2237734 Pairs unsatisfied in distance within a contig. Pair (TACTCTTGTGTTTTCTTTTAG - TGTAAGTAGGTTACCGTTTCA) on contig 2 (5014909 nt) Astart:1268706 Aend:1268727 Bstart:1283368 Bend:1283347 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185579, end:4185558) A=3712591 nt (start:982, end:961) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#112 -> -28576 <- tig#r.129, A=54810 nt (start:45483, end:45504) B=39603 nt (start:354, end:375) CALCULATED DISTANCE APART: -28576 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728278, end:728299) A=1096 nt (start:363, end:342) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.115 -> -3755846 <- tig#9, B=66709 nt (start:41023, end:41002) A=3747885 nt (start:3734823, end:3734802) CALCULATED DISTANCE APART: -3755846 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219241, end:4219220) A=2598 nt (start:2380, end:2359) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TAATGGAATCAAGATCTCAGT - TTTTATAATTCAAAATACGAT) on contig 15 (3712591 nt) Astart:1717748 Aend:1717769 Bstart:1730270 Bend:1730291 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3583 <- tig#26, B=1171658 nt (start:1171213, end:1171234) A=1332708 nt (start:23138, end:23117) CALCULATED DISTANCE APART: -3583 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16585, end:16564) A=1227811 nt (start:7230, end:7209) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082727, end:2082748) B=976128 nt (start:960795, end:960816) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.129 -> -36241 <- tig#115, B=39603 nt (start:50, end:29) A=66709 nt (start:56191, end:56170) CALCULATED DISTANCE APART: -36241 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TAGCGATGATGCGAGGAGAGT - AAATTCAAAACAAGAAAACTT) on contig 15 (3712591 nt) Astart:1718623 Aend:1718644 Bstart:1729395 Bend:1729416 Pairs unsatisfied in distance within a contig. Pair (TGCCTCAAACTTCCTTGGCCT - GGCAATAACAGGTCTGTGATG) on contig 76 (322881 nt) Astart:41949 Aend:41970 Bstart:41953 Bend:41932 CALCULATED DISTANCE APART: 4 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#120 -> -1341554 <- tig#29, B=44710 nt (start:43152, end:43173) A=1463708 nt (start:1359996, end:1359975) CALCULATED DISTANCE APART: -1341554 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGCATCACAGAGAAAAAGAGC - CAAGTTTTGGATCTGGCTTGC) on contig 29 (1463708 nt) Astart:122917 Aend:122896 Bstart:100850 Bend:100871 CALCULATED DISTANCE APART: 22067 Pairs unsatisfied in distance within a contig. Pair (TTTGTACTGTTTCTTTTAGAC - TCCTTCAGCCATAAACTACTC) on contig 2 (5014909 nt) Astart:1269356 Aend:1269377 Bstart:1284018 Bend:1283997 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig. Pair (TTTCTGTTACAGAGTGAAAAT - GTTAGCAAACGTATGGCGGAT) on contig 2 (5014909 nt) Astart:1269821 Aend:1269842 Bstart:1284483 Bend:1284462 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -958623 <- tig#30, A=1290536 nt (start:1184097, end:1184118) B=1050452 nt (start:872184, end:872163) CALCULATED DISTANCE APART: -958623 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GCACCGATGCACGAGTAAGAT - GTCAATAACACATTACAGTTA) on contig 19 (3531543 nt) Astart:3059128 Aend:3059107 Bstart:3049592 Bend:3049571 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#98 -> -8012 <- tig#161, B=88184 nt (start:68319, end:68340) A=15506 nt (start:8147, end:8126) CALCULATED DISTANCE APART: -8012 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -1168778 <- tig#384, A=5070776 nt (start:3882315, end:3882336) B=1359 nt (start:317, end:296) CALCULATED DISTANCE APART: -1168778 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AAGTTAGGATGATTTGGCCGT - AATATCTTATTAAAAGTTTTA) on contig 15 (3712591 nt) Astart:1717798 Aend:1717819 Bstart:1730220 Bend:1730241 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -1168778 <- tig#384, A=5070776 nt (start:3883105, end:3883126) B=1359 nt (start:1107, end:1086) CALCULATED DISTANCE APART: -1168778 < -2000 Pairs unsatisfied in distance within a contig. Pair (AACCTATTCACTACTCAGACG - AGCTCTAATTCCCAATCTTGA) on contig 123 (42452 nt) Astart:14661 Aend:14640 Bstart:1529 Bend:1550 CALCULATED DISTANCE APART: 13132 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#74 -> -258227 <- tig#56, B=238371 nt (start:59081, end:59102) A=262460 nt (start:98937, end:98916) CALCULATED DISTANCE APART: -258227 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -621133 <- tig#r.66, A=2766197 nt (start:2129488, end:2129509) B=201913 nt (start:197489, end:197510) CALCULATED DISTANCE APART: -621133 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136433, end:136454) B=15068 nt (start:1243, end:1264) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -3661476 <- tig#r.3, A=262460 nt (start:68586, end:68607) B=3889482 nt (start:401880, end:401901) CALCULATED DISTANCE APART: -3661476 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -3661475 <- tig#r.3, A=262460 nt (start:68586, end:68607) B=3889482 nt (start:401881, end:401902) CALCULATED DISTANCE APART: -3661475 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -1335763 <- tig#4, B=3747885 nt (start:2857597, end:2857618) A=3837743 nt (start:465475, end:465454) CALCULATED DISTANCE APART: -1335763 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCACTTAAGATTTTGAAGTCA - TTCCAAATTTAATTGAATATT) on contig 5 (3689108 nt) Astart:1169632 Aend:1169653 Bstart:1184767 Bend:1184746 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#118 -> -33564 <- tig#97, B=66247 nt (start:37872, end:37893) A=91050 nt (start:25189, end:25168) CALCULATED DISTANCE APART: -33564 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#4 -> -4036387 <- tig#8, B=3837743 nt (start:690683, end:690704) A=5070776 nt (start:909327, end:909306) CALCULATED DISTANCE APART: -4036387 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGAGGAAGAAAGCTGTTGGTA - AAAACGCGAGTTTTCTTCGGA) on contig 1 (4853111 nt) Astart:346825 Aend:346846 Bstart:392102 Bend:392081 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#22 -> -6369340 <- tig#6, B=1636463 nt (start:14697, end:14718) A=6870868 nt (start:4767574, end:4767553) CALCULATED DISTANCE APART: -6369340 < -2000 Pairs unsatisfied in distance within a contig. Pair (CGGTCTCCCATTAGACCATAA - AATGAGTACATCATTGGTCAT) on contig 14 (2271162 nt) Astart:2001203 Aend:2001182 Bstart:1734436 Bend:1734457 CALCULATED DISTANCE APART: 266767 Pairs unsatisfied in pairing logic within a contig. Pair (CATTCTGCTTGTCTCAGTCTT - GGCAAAATATCTTTATTATTA) on contig 19 (3531543 nt) Astart:3059816 Aend:3059795 Bstart:3048907 Bend:3048886 Pairs unsatisfied in distance within a contig. Pair (GTACGATTTTCCGGTGCTCTC - AAGCATAGATTCCCATTGGTT) on contig 1 (4853111 nt) Astart:346245 Aend:346266 Bstart:391522 Bend:391501 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260412, end:2260433) B=356404 nt (start:342812, end:342833) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GTAACACATACTATTGTATAC - AGAAAACACTAAAGTGAGAAG) on contig 4 (3837743 nt) Astart:2357971 Aend:2357992 Bstart:2360091 Bend:2360112 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728788, end:728809) A=1096 nt (start:873, end:852) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATGTGCACAAAGAGTACGGTA - ATATATATGTCTTTATCTATA) on contig 14 (2271162 nt) Astart:658461 Aend:658440 Bstart:495450 Bend:495429 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460904, end:460883) A=1345436 nt (start:24756, end:24735) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#47 -> -154462 <- tig#32, B=471458 nt (start:328556, end:328577) A=972151 nt (start:31560, end:31539) CALCULATED DISTANCE APART: -154462 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282767, end:282788) B=2196 nt (start:948, end:927) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#33 -> -492044 <- tig#32, A=1290487 nt (start:1235667, end:1235688) B=972151 nt (start:457224, end:457203) CALCULATED DISTANCE APART: -492044 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#48 -> -156052 <- tig#51, B=487359 nt (start:406281, end:406302) A=875428 nt (start:94974, end:94953) CALCULATED DISTANCE APART: -156052 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.48 -> -3108447 <- tig#12, B=487359 nt (start:404833, end:404812) A=2766197 nt (start:2723614, end:2723593) CALCULATED DISTANCE APART: -3108447 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -1168778 <- tig#384, A=5070776 nt (start:3882460, end:3882481) B=1359 nt (start:462, end:441) CALCULATED DISTANCE APART: -1168778 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17495, end:17474) A=1227811 nt (start:6320, end:6299) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#36 -> -155616 <- tig#r.43, A=855454 nt (start:790610, end:790631) B=1235946 nt (start:1125174, end:1125195) CALCULATED DISTANCE APART: -155616 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATGATCTGAAACCAGAGGAGA - CATTCGTTGCATTGCATGCTT) on contig 29 (1463708 nt) Astart:122947 Aend:122926 Bstart:100880 Bend:100901 CALCULATED DISTANCE APART: 22067 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3583 <- tig#26, B=1171658 nt (start:1171218, end:1171239) A=1332708 nt (start:23143, end:23122) CALCULATED DISTANCE APART: -3583 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTTTGGTGCTTTTGTTTGGTT - GGACTGATAAAGATTTGTGAG) on contig 33 (1290487 nt) Astart:109137 Aend:109158 Bstart:244464 Bend:244485 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#79 -> -614150 <- tig#r.2, A=136600 nt (start:76382, end:76403) B=5014909 nt (start:4440977, end:4440998) CALCULATED DISTANCE APART: -614150 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGTTTTAAAAGTGATCAAGGA - TCTGCCAAAAAGAATTTGAGC) on contig 34 (1705564 nt) Astart:679899 Aend:679878 Bstart:664936 Bend:664957 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig. Pair (TGTGTTTTGAGTATAGTGGAA - CAGGAATTCCAAGCCGGGATG) on contig 37 (853709 nt) Astart:838914 Aend:838893 Bstart:823409 Bend:823430 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185889, end:4185868) A=3712591 nt (start:672, end:651) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTTTCTTCGTAGCTCTAAAGT - CCTTGATGGAGTGTCAATCAC) on contig 19 (3531543 nt) Astart:3059606 Aend:3059585 Bstart:3049117 Bend:3049096 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185854, end:4185833) A=3712591 nt (start:707, end:686) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17510, end:17489) A=1227811 nt (start:6305, end:6284) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTGACTAACTTCTTTTTGATT - TACAAGTCAAATATCTTTGAT) on contig 19 (3531543 nt) Astart:3058943 Aend:3058922 Bstart:3049777 Bend:3049756 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#106 -> -136141 <- tig#84, B=117163 nt (start:27816, end:27837) A=197079 nt (start:66794, end:66773) CALCULATED DISTANCE APART: -136141 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#57 -> -3231864 <- tig#7, A=258385 nt (start:256019, end:256040) B=3534247 nt (start:3249498, end:3249477) CALCULATED DISTANCE APART: -3231864 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.86 -> -592847 <- tig#43, B=280231 nt (start:15165, end:15144) A=1235946 nt (start:597682, end:597661) CALCULATED DISTANCE APART: -592847 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730532, end:730553) B=3531543 nt (start:3200106, end:3200085) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.521 -> -111708 <- tig#63, B=1100 nt (start:507, end:486) A=274372 nt (start:131201, end:131180) CALCULATED DISTANCE APART: -111708 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCGTGTTTTGACTCGTGTGTT - CTAGGAGAGATGAAACTGGTA) on contig 37 (853709 nt) Astart:538422 Aend:538443 Bstart:551095 Bend:551074 CALCULATED DISTANCE APART: 12673 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#5 -> -3723464 <- tig#23, B=3689108 nt (start:602801, end:602822) A=1345436 nt (start:657157, end:657136) CALCULATED DISTANCE APART: -3723464 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#102 -> -37092 <- tig#122, A=83426 nt (start:42591, end:42612) B=43035 nt (start:16257, end:16236) CALCULATED DISTANCE APART: -37092 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#48 -> -156052 <- tig#51, B=487359 nt (start:406371, end:406392) A=875428 nt (start:95064, end:95043) CALCULATED DISTANCE APART: -156052 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -4201 <- tig#r.96, A=262460 nt (start:244276, end:244297) B=91302 nt (start:85285, end:85306) CALCULATED DISTANCE APART: -4201 < -2000 Pairs unsatisfied in distance within a contig. Pair (AACATGCTCCTGATGCTCAAA - TACGTTTTATGGTTTAACAAA) on contig 5 (3689108 nt) Astart:1178462 Aend:1178441 Bstart:1163328 Bend:1163349 CALCULATED DISTANCE APART: 15134 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#6 -> -904381 <- tig#61, A=6870868 nt (start:5974350, end:5974371) B=221859 nt (start:27863, end:27842) CALCULATED DISTANCE APART: -904381 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -1263638 <- tig#29, A=736718 nt (start:407479, end:407500) B=1463708 nt (start:954399, end:954378) CALCULATED DISTANCE APART: -1263638 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259787, end:2259808) B=356404 nt (start:343437, end:343458) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#11 -> -4878223 <- tig#29, A=4628067 nt (start:683838, end:683859) B=1463708 nt (start:953994, end:953973) CALCULATED DISTANCE APART: -4878223 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GAACGAAATGTGAACCCTTGT - ATGACACGCCCATTCTTCTCG) on contig 49 (399963 nt) Astart:43280 Aend:43259 Bstart:43786 Bend:43807 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.6 -> -4769254 <- tig#49, B=6870868 nt (start:4745974, end:4745953) A=399963 nt (start:43280, end:43259) CALCULATED DISTANCE APART: -4769254 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#19 -> -3098757 <- tig#47, A=3531543 nt (start:470151, end:470172) B=471458 nt (start:57365, end:57344) CALCULATED DISTANCE APART: -3098757 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.409 -> -1019852 <- tig#23, B=1303 nt (start:926, end:905) A=1345436 nt (start:1038926, end:1038905) CALCULATED DISTANCE APART: -1019852 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTATGAAATTGAGTTTATGTG - GCCTCATTGTACGCTTGCCCT) on contig 41 (667251 nt) Astart:88603 Aend:88582 Bstart:75923 Bend:75944 CALCULATED DISTANCE APART: 12680 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#10 -> -2964281 <- tig#103, B=3047199 nt (start:260990, end:261011) A=211876 nt (start:198072, end:198051) CALCULATED DISTANCE APART: -2964281 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136278, end:136299) B=15068 nt (start:1398, end:1419) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAGTCGAAAGATTTCAGGCTT - GGTTTGAGCCTTGAATCATCA) on contig 30 (1050452 nt) Astart:648599 Aend:648620 Bstart:673633 Bend:673612 CALCULATED DISTANCE APART: 25034 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136598, end:136619) B=15068 nt (start:1078, end:1099) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGATAAAGCTGTCACGCTTAT - AATTTAATTGAGGATTTTAAA) on contig 5 (3689108 nt) Astart:1171727 Aend:1171748 Bstart:1186863 Bend:1186842 CALCULATED DISTANCE APART: 15136 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -40662 <- tig#443, A=736718 nt (start:676646, end:676667) B=1213 nt (start:590, end:569) CALCULATED DISTANCE APART: -40662 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#47 -> -293192 <- tig#6, A=471458 nt (start:171029, end:171050) B=6870868 nt (start:12763, end:12742) CALCULATED DISTANCE APART: -293192 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#92 -> -2121327 <- tig#16, A=101136 nt (start:3373, end:3394) B=2098954 nt (start:2043564, end:2043543) CALCULATED DISTANCE APART: -2121327 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#102 -> -20531 <- tig#r.7, A=83426 nt (start:52870, end:52891) B=3534247 nt (start:3524272, end:3524293) CALCULATED DISTANCE APART: -20531 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#14 -> -765455 <- tig#43, B=2271162 nt (start:2082999, end:2083020) A=1235946 nt (start:597292, end:597271) CALCULATED DISTANCE APART: -765455 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3583 <- tig#26, B=1171658 nt (start:1171428, end:1171449) A=1332708 nt (start:23353, end:23332) CALCULATED DISTANCE APART: -3583 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219391, end:4219370) A=2598 nt (start:2230, end:2209) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -1335762 <- tig#4, B=3747885 nt (start:2857357, end:2857378) A=3837743 nt (start:465234, end:465213) CALCULATED DISTANCE APART: -1335762 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -4201 <- tig#r.96, A=262460 nt (start:244416, end:244437) B=91302 nt (start:85145, end:85166) CALCULATED DISTANCE APART: -4201 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136658, end:136679) B=15068 nt (start:1018, end:1039) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig. Pair (TAACTTATAAGAAGCTGAAGA - CATTTCATTTTTTTTATGGAC) on contig 5 (3689108 nt) Astart:1169407 Aend:1169428 Bstart:1184542 Bend:1184521 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in pairing logic within a contig. Pair (GCTGATGATTTGCTGAGGTGT - TGCAAGTTACAACAAATAGAA) on contig 15 (3712591 nt) Astart:1718603 Aend:1718624 Bstart:1729415 Bend:1729436 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282722, end:282743) B=2196 nt (start:903, end:882) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CCGAGAGCTATATTACCTTGC - AAATATATACATCAATATTCT) on contig 15 (3712591 nt) Astart:1718843 Aend:1718864 Bstart:1729175 Bend:1729196 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#103 -> -852675 <- tig#r.40, A=211876 nt (start:6528, end:6549) B=668174 nt (start:847, end:868) CALCULATED DISTANCE APART: -852675 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#19 -> -1649636 <- tig#31, A=3531543 nt (start:1878742, end:1878763) B=976128 nt (start:16835, end:16814) CALCULATED DISTANCE APART: -1649636 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:283047, end:283068) B=2196 nt (start:1228, end:1207) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATTTCTTGTTTCTGTAGTATG - AAGAACAACGATTCTGGCAAA) on contig 21 (1811326 nt) Astart:154800 Aend:154779 Bstart:260897 Bend:260876 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#19 -> -3620477 <- tig#r.54, A=3531543 nt (start:471406, end:471427) B=625914 nt (start:45574, end:45595) CALCULATED DISTANCE APART: -3620477 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219161, end:4219140) A=2598 nt (start:2460, end:2439) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.86 -> -821321 <- tig#33, B=280231 nt (start:15151, end:15130) A=1290487 nt (start:826170, end:826149) CALCULATED DISTANCE APART: -821321 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#47 -> -347207 <- tig#53, B=471458 nt (start:285518, end:285539) A=354284 nt (start:181267, end:181246) CALCULATED DISTANCE APART: -347207 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460484, end:460463) A=1345436 nt (start:25176, end:25155) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#92 -> -6676 <- tig#r.139, A=101136 nt (start:101097, end:101118) B=27696 nt (start:1059, end:1080) CALCULATED DISTANCE APART: -6676 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185564, end:4185543) A=3712591 nt (start:997, end:976) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#51 -> -301846 <- tig#r.125, A=875428 nt (start:581626, end:581647) B=54013 nt (start:25969, end:25990) CALCULATED DISTANCE APART: -301846 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -4201 <- tig#r.96, A=262460 nt (start:244261, end:244282) B=91302 nt (start:85300, end:85321) CALCULATED DISTANCE APART: -4201 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.101 -> -46850 <- tig#107, B=84691 nt (start:24124, end:24103) A=68734 nt (start:42726, end:42705) CALCULATED DISTANCE APART: -46850 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#52 -> -354278 <- tig#1, B=356404 nt (start:132, end:153) A=4853111 nt (start:18006, end:17985) CALCULATED DISTANCE APART: -354278 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#120 -> -1341555 <- tig#29, B=44710 nt (start:44311, end:44332) A=1463708 nt (start:1361156, end:1361135) CALCULATED DISTANCE APART: -1341555 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#19 -> -1371857 <- tig#r.6, A=3531543 nt (start:2524191, end:2524212) B=6870868 nt (start:6486363, end:6486384) CALCULATED DISTANCE APART: -1371857 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082767, end:2082788) B=976128 nt (start:960755, end:960776) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#305 -> -2202335 <- tig#r.19, A=1638 nt (start:287, end:308) B=3531543 nt (start:1310559, end:1310580) CALCULATED DISTANCE APART: -2202335 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#423 -> -926237 <- tig#34, A=1276 nt (start:54, end:75) B=1705564 nt (start:945015, end:944994) CALCULATED DISTANCE APART: -926237 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#52 -> -355614 <- tig#3, B=356404 nt (start:32, end:53) A=3889482 nt (start:19242, end:19221) CALCULATED DISTANCE APART: -355614 < -2000 Pairs unsatisfied in distance within a contig. Pair (TAACTAACTCAGGAAAATGGA - CCGATGCGATGAGTCAAACCT) on contig 2 (5014909 nt) Astart:1268946 Aend:1268967 Bstart:1283608 Bend:1283587 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig. Pair (TGAACTTAGCAGCAAAATGAT - ATTAGGTATGGTTTATCCCCA) on contig 15 (3712591 nt) Astart:3352462 Aend:3352483 Bstart:3377448 Bend:3377427 CALCULATED DISTANCE APART: 24986 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33829, end:33808) A=855454 nt (start:18620, end:18599) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#52 -> -356009 <- tig#3, B=356404 nt (start:112, end:133) A=3889482 nt (start:19717, end:19696) CALCULATED DISTANCE APART: -356009 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TAGTCCAGAGCAAACACTAAC - TTTTTAACGGTGGGCGCTTGG) on contig 15 (3712591 nt) Astart:1791739 Aend:1791718 Bstart:2055792 Bend:2055813 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17335, end:17314) A=1227811 nt (start:6480, end:6459) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#74 -> -258382 <- tig#56, B=238371 nt (start:58939, end:58960) A=262460 nt (start:98950, end:98929) CALCULATED DISTANCE APART: -258382 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#74 -> -258350 <- tig#56, B=238371 nt (start:58971, end:58992) A=262460 nt (start:98950, end:98929) CALCULATED DISTANCE APART: -258350 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TGAAGACAAAAGCTTTAAACA - GCTTGCAAGTTGCACAGCCTT) on contig 14 (2271162 nt) Astart:658436 Aend:658415 Bstart:495475 Bend:495454 Pairs unsatisfied in pairing logic within a contig. Pair (TGCTGAGGTGTAGCGATGATG - CAAGAAAACTTGCAAGTTACA) on contig 15 (3712591 nt) Astart:1718613 Aend:1718634 Bstart:1729405 Bend:1729426 Pairs unsatisfied in pairing logic within a contig. Pair (ATCATGACCCTAGTATTTGTT - ATCTTAATAAAAGACGTGTGG) on contig 19 (3531543 nt) Astart:3058638 Aend:3058617 Bstart:3050082 Bend:3050061 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.403 -> -2330792 <- tig#13, B=1321 nt (start:195, end:174) A=2650694 nt (start:2350597, end:2350576) CALCULATED DISTANCE APART: -2330792 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#48 -> -3151847 <- tig#12, B=487359 nt (start:40476, end:40497) A=2766197 nt (start:2724964, end:2724943) CALCULATED DISTANCE APART: -3151847 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#54 -> -612568 <- tig#49, B=625914 nt (start:36685, end:36706) A=399963 nt (start:43339, end:43318) CALCULATED DISTANCE APART: -612568 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.31 -> -71281 <- tig#98, B=976128 nt (start:16950, end:16929) A=88184 nt (start:74331, end:74310) CALCULATED DISTANCE APART: -71281 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#84 -> -1973907 <- tig#13, A=197079 nt (start:196798, end:196819) B=2650694 nt (start:1993626, end:1993605) CALCULATED DISTANCE APART: -1973907 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282372, end:282393) B=2196 nt (start:553, end:532) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig. Pair (CCCATAACATTTGCCCCCTTA - AAATAGTAAGAGAGTATAGCC) on contig 60 (232804 nt) Astart:31217 Aend:31238 Bstart:57495 Bend:57474 CALCULATED DISTANCE APART: 26278 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#34 -> -42647 <- tig#r.131, A=1705564 nt (start:1679279, end:1679300) B=36503 nt (start:141, end:162) CALCULATED DISTANCE APART: -42647 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.7 -> -2502325 <- tig#58, B=3534247 nt (start:2417219, end:2417198) A=374416 nt (start:105106, end:105085) CALCULATED DISTANCE APART: -2502325 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2590, end:2611) A=258385 nt (start:1126, end:1105) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185699, end:4185678) A=3712591 nt (start:862, end:841) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -418494 <- tig#46, A=736718 nt (start:457862, end:457883) B=577887 nt (start:159638, end:159617) CALCULATED DISTANCE APART: -418494 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#48 -> -455298 <- tig#387, B=487359 nt (start:12173, end:12194) A=1354 nt (start:112, end:91) CALCULATED DISTANCE APART: -455298 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGGAGGAGAAAGGGTTTTATG - ATAGAATAAAAATCTAACACA) on contig 5 (3689108 nt) Astart:1178297 Aend:1178276 Bstart:1163163 Bend:1163184 CALCULATED DISTANCE APART: 15134 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136748, end:136769) B=15068 nt (start:928, end:949) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#2 -> -6085454 <- tig#25, A=5014909 nt (start:11525, end:11546) B=1290536 nt (start:1102070, end:1102049) CALCULATED DISTANCE APART: -6085454 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#74 -> -258227 <- tig#56, B=238371 nt (start:59086, end:59107) A=262460 nt (start:98942, end:98921) CALCULATED DISTANCE APART: -258227 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135798, end:135819) B=15068 nt (start:1878, end:1899) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#2 -> -4999288 <- tig#r.132, A=5014909 nt (start:5225, end:5246) B=34686 nt (start:25082, end:25103) CALCULATED DISTANCE APART: -4999288 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#16 -> -1845669 <- tig#270, B=2098954 nt (start:233396, end:233417) A=1880 nt (start:111, end:90) CALCULATED DISTANCE APART: -1845669 < -2000 Pairs unsatisfied in distance within a contig. Pair (CCTATAAACAGCATATACATC - TGCTATTTAGTCACAAGTTAC) on contig 5 (3689108 nt) Astart:1169522 Aend:1169543 Bstart:1184657 Bend:1184636 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -621133 <- tig#r.66, A=2766197 nt (start:2129448, end:2129469) B=201913 nt (start:197529, end:197550) CALCULATED DISTANCE APART: -621133 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.15 -> -3863647 <- tig#1, B=3712591 nt (start:1966237, end:1966216) A=4853111 nt (start:1917410, end:1917389) CALCULATED DISTANCE APART: -3863647 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -3959278 <- tig#2, B=3747885 nt (start:2104295, end:2104316) A=5014909 nt (start:2335688, end:2335667) CALCULATED DISTANCE APART: -3959278 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#265 -> -3126344 <- tig#4, A=1946 nt (start:1711, end:1732) B=3837743 nt (start:3146109, end:3146088) CALCULATED DISTANCE APART: -3126344 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAAAATCTTGTATATCTTTTT - TTTGGCTCATGTTTCAGGATA) on contig 109 (66564 nt) Astart:6189 Aend:6168 Bstart:568 Bend:589 CALCULATED DISTANCE APART: 5621 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33739, end:33718) A=855454 nt (start:18710, end:18689) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185569, end:4185548) A=3712591 nt (start:992, end:971) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TCTTATACTCGATGGGTTTAC - CGTAAGTGCTAAGTTCACTCT) on contig 4 (3837743 nt) Astart:2358456 Aend:2358477 Bstart:2359606 Bend:2359627 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#92 -> -2121765 <- tig#16, A=101136 nt (start:2938, end:2959) B=2098954 nt (start:2043567, end:2043546) CALCULATED DISTANCE APART: -2121765 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.42 -> -1433157 <- tig#20, B=659641 nt (start:2243, end:2222) A=2328057 nt (start:1450914, end:1450893) CALCULATED DISTANCE APART: -1433157 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CGAGAATGGAACCAGGACAGT - TGGTGTTGAGTACTTTGGTGA) on contig 48 (487359 nt) Astart:38422 Aend:38443 Bstart:385552 Bend:385573 Pairs unsatisfied in distance within a contig. Pair (GTAAGATGATATGATGGATGT - TTTAAAAAATCACTATCTCTG) on contig 34 (1705564 nt) Astart:679299 Aend:679278 Bstart:664336 Bend:664357 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in pairing logic within a contig. Pair (GGAGTGGCAGAGTGATATAAT - ACGATGATTTTAACAAAACGA) on contig 15 (3712591 nt) Astart:1719253 Aend:1719274 Bstart:1728765 Bend:1728786 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#146 -> -25215 <- tig#r.139, A=21489 nt (start:2846, end:2867) B=27696 nt (start:1124, end:1145) CALCULATED DISTANCE APART: -25215 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#47 -> -347211 <- tig#53, B=471458 nt (start:285523, end:285544) A=354284 nt (start:181276, end:181255) CALCULATED DISTANCE APART: -347211 < -2000 Pairs unsatisfied in distance within a contig. Pair (GAGATTTTGGGAATGGGAGGT - AAGAAGGTATGATTCTCATAT) on contig 5 (3689108 nt) Astart:1169712 Aend:1169733 Bstart:1184847 Bend:1184826 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -443374 <- tig#38, A=736718 nt (start:484083, end:484104) B=1143067 nt (start:210739, end:210718) CALCULATED DISTANCE APART: -443374 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#131 -> -2484262 <- tig#12, B=36503 nt (start:14517, end:14538) A=2766197 nt (start:2482276, end:2482255) CALCULATED DISTANCE APART: -2484262 < -2000 Pairs unsatisfied in distance within a contig. Pair (GTCACTGAAAGATAGAAATCA - CTTCACTTTCCTGAGAATATC) on contig 34 (1705564 nt) Astart:679574 Aend:679553 Bstart:664611 Bend:664632 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#9 -> -2729019 <- tig#69, A=3747885 nt (start:1134140, end:1134161) B=186132 nt (start:135274, end:135253) CALCULATED DISTANCE APART: -2729019 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#31 -> -745100 <- tig#32, A=976128 nt (start:407086, end:407107) B=972151 nt (start:196058, end:196037) CALCULATED DISTANCE APART: -745100 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#37 -> -738605 <- tig#r.53, A=853709 nt (start:109444, end:109465) B=354284 nt (start:339944, end:339965) CALCULATED DISTANCE APART: -738605 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -1335763 <- tig#4, B=3747885 nt (start:2857637, end:2857658) A=3837743 nt (start:465515, end:465494) CALCULATED DISTANCE APART: -1335763 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AATCCGGCGAACTCTCTCGCC - TGACAAAAGGTCTTCTTCATG) on contig 16 (2098954 nt) Astart:726875 Aend:726854 Bstart:1188172 Bend:1188193 Pairs unsatisfied in pairing logic within a contig. Pair (TTATAGAATTTTAATGAAATG - GGTCCTAATTTATTTCATGAA) on contig 19 (3531543 nt) Astart:3058328 Aend:3058307 Bstart:3050392 Bend:3050371 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#103 -> -188044 <- tig#521, A=211876 nt (start:4839, end:4860) B=1100 nt (start:1007, end:986) CALCULATED DISTANCE APART: -188044 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#49 -> -1152645 <- tig#r.43, A=399963 nt (start:351916, end:351937) B=1235946 nt (start:111348, end:111369) CALCULATED DISTANCE APART: -1152645 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259877, end:2259898) B=356404 nt (start:343347, end:343368) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136508, end:136529) B=15068 nt (start:1168, end:1189) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#305 -> -2202335 <- tig#r.19, A=1638 nt (start:352, end:373) B=3531543 nt (start:1310494, end:1310515) CALCULATED DISTANCE APART: -2202335 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAGAGTATTTGATGAATAGAG - TCTGAATGAAAAGCAACAGGT) on contig 6 (6870868 nt) Astart:1137869 Aend:1137848 Bstart:1129442 Bend:1129463 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219326, end:4219305) A=2598 nt (start:2295, end:2274) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTGATATTATAATAGGCTAAA - TGAAAGACAGAATTGCATATA) on contig 19 (3531543 nt) Astart:3058238 Aend:3058217 Bstart:3050482 Bend:3050461 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12566, end:12545) A=91302 nt (start:11627, end:11606) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459519, end:459498) A=1345436 nt (start:26141, end:26120) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAGCAGATTGTGCAAGTGAAA - GATTAAATTGCACGTTCAAAA) on contig 6 (6870868 nt) Astart:1137739 Aend:1137718 Bstart:1129312 Bend:1129333 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459004, end:458983) A=1345436 nt (start:26656, end:26635) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.17 -> -1813077 <- tig#74, B=1959065 nt (start:1774044, end:1774023) A=238371 nt (start:59033, end:59012) CALCULATED DISTANCE APART: -1813077 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#547 -> -393692 <- tig#4, A=1064 nt (start:259, end:280) B=3837743 nt (start:412887, end:412866) CALCULATED DISTANCE APART: -393692 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259587, end:2259608) B=356404 nt (start:343637, end:343658) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#283 -> -3818458 <- tig#2, A=1768 nt (start:448, end:469) B=5014909 nt (start:3837138, end:3837117) CALCULATED DISTANCE APART: -3818458 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCATTTGAATCTATTGATTCG - AAACCCTTATAGCTAACAACA) on contig 2 (5014909 nt) Astart:1268551 Aend:1268572 Bstart:1283213 Bend:1283192 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#73 -> -6652852 <- tig#6, A=171056 nt (start:153354, end:153375) B=6870868 nt (start:6655150, end:6655129) CALCULATED DISTANCE APART: -6652852 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATACTTAGATTATTTACAAAT - GCATAAGACAAGTTAATAATG) on contig 19 (3531543 nt) Astart:3060501 Aend:3060480 Bstart:3048222 Bend:3048201 Pairs unsatisfied in pairing logic within a contig. Pair (CGCAGAGGCGCCACAAAAACA - TTATGTTTGGTTTTAAGTATT) on contig 15 (3712591 nt) Astart:1716603 Aend:1716624 Bstart:1731415 Bend:1731436 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#39 -> -425830 <- tig#r.68, A=736718 nt (start:310548, end:310569) B=189499 nt (start:169839, end:169860) CALCULATED DISTANCE APART: -425830 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:458969, end:458948) A=1345436 nt (start:26691, end:26670) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAAAATGATTTACATATGTTT - GGTGAAAGGGATATATGTGAA) on contig 109 (66564 nt) Astart:6074 Aend:6053 Bstart:453 Bend:474 CALCULATED DISTANCE APART: 5621 Pairs unsatisfied in pairing logic within a contig. Pair (TCCCGGTAAATTGGTTGTGAT - GGATCACATCTTGTAGTTTAT) on contig 4 (3837743 nt) Astart:2358576 Aend:2358597 Bstart:2359486 Bend:2359507 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33504, end:33483) A=855454 nt (start:18945, end:18924) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728108, end:728129) A=1096 nt (start:193, end:172) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATTAAAGAGTGATAATGATAT - TCAATGTTCTAAAGCCCAGAA) on contig 6 (6870868 nt) Astart:1138219 Aend:1138198 Bstart:1129792 Bend:1129813 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728358, end:728379) A=1096 nt (start:443, end:422) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728708, end:728729) A=1096 nt (start:793, end:772) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#73 -> -6356 <- tig#69, A=171056 nt (start:159658, end:159679) B=186132 nt (start:14958, end:14937) CALCULATED DISTANCE APART: -6356 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3583 <- tig#26, B=1171658 nt (start:1171513, end:1171534) A=1332708 nt (start:23438, end:23417) CALCULATED DISTANCE APART: -3583 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282917, end:282938) B=2196 nt (start:1098, end:1077) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig. Pair (GTGAGACAAGATTTTGAGCTG - TAGCAAACAACTTGCAAAGAA) on contig 15 (3712591 nt) Astart:3352532 Aend:3352553 Bstart:3377518 Bend:3377497 CALCULATED DISTANCE APART: 24986 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#54 -> -328165 <- tig#r.53, A=625914 nt (start:323457, end:323478) B=354284 nt (start:308576, end:308597) CALCULATED DISTANCE APART: -328165 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#47 -> -284105 <- tig#165, B=471458 nt (start:169619, end:169640) A=13843 nt (start:2266, end:2245) CALCULATED DISTANCE APART: -284105 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460589, end:460568) A=1345436 nt (start:25071, end:25050) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -621133 <- tig#r.66, A=2766197 nt (start:2129823, end:2129844) B=201913 nt (start:197154, end:197175) CALCULATED DISTANCE APART: -621133 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#207 -> -1387873 <- tig#19, B=5890 nt (start:434, end:455) A=3531543 nt (start:1402417, end:1402396) CALCULATED DISTANCE APART: -1387873 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTGTTGAAAATTCAGAGTTTT - TGTGATTTCTGTTCTTTGGGG) on contig 2 (5014909 nt) Astart:1268591 Aend:1268612 Bstart:1283253 Bend:1283232 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#54 -> -799725 <- tig#28, A=625914 nt (start:600152, end:600173) B=1171658 nt (start:793963, end:793942) CALCULATED DISTANCE APART: -799725 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.74 -> -1813119 <- tig#17, B=238371 nt (start:59076, end:59055) A=1959065 nt (start:1774043, end:1774022) CALCULATED DISTANCE APART: -1813119 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AAAAAAAAAGTAATTGACATG - ATGGCTAGGATGGTTGAATCA) on contig 9 (3747885 nt) Astart:2849109 Aend:2849130 Bstart:2856732 Bend:2856753 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4186184, end:4186163) A=3712591 nt (start:377, end:356) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#64 -> -210549 <- tig#109, B=211265 nt (start:367, end:388) A=66564 nt (start:19651, end:19630) CALCULATED DISTANCE APART: -210549 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCTTGTACTCGTCCTTGAACT - TCCCCACCAGTAAAGTAGTCT) on contig 15 (3712591 nt) Astart:3352447 Aend:3352468 Bstart:3377433 Bend:3377412 CALCULATED DISTANCE APART: 24986 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#148 -> -1869235 <- tig#15, A=35830 nt (start:33994, end:34015) B=3712591 nt (start:1887399, end:1887378) CALCULATED DISTANCE APART: -1869235 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16970, end:16949) A=1227811 nt (start:6845, end:6824) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -418494 <- tig#46, A=736718 nt (start:457707, end:457728) B=577887 nt (start:159483, end:159462) CALCULATED DISTANCE APART: -418494 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTTTATGTCCAGAAAACCTAA - TGGAGAAAATCGGATCTATGA) on contig 34 (1705564 nt) Astart:679744 Aend:679723 Bstart:664781 Bend:664802 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in pairing logic within a contig. Pair (GCCATGCATCAAATCTTAGAA - AGAATTCTATGTATCGCCGAG) on contig 19 (3531543 nt) Astart:3059506 Aend:3059485 Bstart:3049217 Bend:3049196 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33409, end:33388) A=855454 nt (start:19040, end:19019) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig. Pair (ACCAGGTAACTGGAGACCAGC - CGATCTGGGTACTCTTCACGG) on contig 4 (3837743 nt) Astart:1822729 Aend:1822708 Bstart:1799654 Bend:1799675 CALCULATED DISTANCE APART: 23075 Pairs unsatisfied in distance within a contig. Pair (TGTTGACGTTTTTCCTTCTTG - CCTCACTCTTTCACTTCCATG) on contig 2 (5014909 nt) Astart:1269521 Aend:1269542 Bstart:1284183 Bend:1284162 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#40 -> -506904 <- tig#r.79, A=668174 nt (start:201392, end:201413) B=136600 nt (start:76478, end:76499) CALCULATED DISTANCE APART: -506904 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.46 -> -213331 <- tig#51, B=577887 nt (start:159903, end:159882) A=875428 nt (start:73428, end:73407) CALCULATED DISTANCE APART: -213331 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#74 -> -453293 <- tig#r.47, A=238371 nt (start:73388, end:73409) B=471458 nt (start:163148, end:163169) CALCULATED DISTANCE APART: -453293 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.48 -> -372867 <- tig#98, B=487359 nt (start:370643, end:370622) A=88184 nt (start:22224, end:22203) CALCULATED DISTANCE APART: -372867 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#9 -> -6907516 <- tig#r.5, A=3747885 nt (start:149278, end:149299) B=3689108 nt (start:360199, end:360220) CALCULATED DISTANCE APART: -6907516 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282332, end:282353) B=2196 nt (start:513, end:492) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -322558 <- tig#r.572, A=2650694 nt (start:2309085, end:2309106) B=1031 nt (start:82, end:103) CALCULATED DISTANCE APART: -322558 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#38 -> -1058140 <- tig#r.604, A=1143067 nt (start:65201, end:65222) B=998 nt (start:724, end:745) CALCULATED DISTANCE APART: -1058140 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -8119246 <- tig#6, B=3747885 nt (start:376518, end:376539) A=6870868 nt (start:4767879, end:4767858) CALCULATED DISTANCE APART: -8119246 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#92 -> -2121566 <- tig#16, A=101136 nt (start:3377, end:3398) B=2098954 nt (start:2043807, end:2043786) CALCULATED DISTANCE APART: -2121566 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTCTTCTGTTGGGCTGCAGAG - GAAAAAGTACTGACCCTGATT) on contig 1 (4853111 nt) Astart:346635 Aend:346656 Bstart:391912 Bend:391891 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in pairing logic within a contig. Pair (TTCTTTATAAGTTATCGTTTA - TCTTGTCTTACCTCTAATGCC) on contig 19 (3531543 nt) Astart:3059576 Aend:3059555 Bstart:3049147 Bend:3049126 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136473, end:136494) B=15068 nt (start:1203, end:1224) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.35 -> -676591 <- tig#2, B=1135475 nt (start:599475, end:599454) A=5014909 nt (start:97116, end:97095) CALCULATED DISTANCE APART: -676591 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12166, end:12145) A=91302 nt (start:12027, end:12006) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6228 <- tig#57, B=27696 nt (start:1544, end:1565) A=258385 nt (start:76, end:55) CALCULATED DISTANCE APART: -6228 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GAATTGTGATTTAACCATTCT - TTATTAAAGGTATTATCATTC) on contig 19 (3531543 nt) Astart:3059831 Aend:3059810 Bstart:3048892 Bend:3048871 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#173 -> -6636294 <- tig#6, A=11377 nt (start:10263, end:10284) B=6870868 nt (start:6655180, end:6655159) CALCULATED DISTANCE APART: -6636294 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.74 -> -1813153 <- tig#17, B=238371 nt (start:59101, end:59080) A=1959065 nt (start:1774052, end:1774031) CALCULATED DISTANCE APART: -1813153 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#64 -> -210568 <- tig#109, B=211265 nt (start:128, end:149) A=66564 nt (start:19431, end:19410) CALCULATED DISTANCE APART: -210568 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#47 -> -347205 <- tig#53, B=471458 nt (start:285521, end:285542) A=354284 nt (start:181268, end:181247) CALCULATED DISTANCE APART: -347205 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459939, end:459918) A=1345436 nt (start:25721, end:25700) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GCGATCGAGTTTGTCCTAATT - TCATTTCTGCTAGCAGGCAAA) on contig 19 (3531543 nt) Astart:3058083 Aend:3058062 Bstart:3050637 Bend:3050616 Pairs unsatisfied in pairing logic within a contig. Pair (ATAATTCCCATCTTATTATTG - CAAAATTCTATCCGTAATGAT) on contig 15 (3712591 nt) Astart:1718993 Aend:1719014 Bstart:1729025 Bend:1729046 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.257 -> -2902765 <- tig#8, B=1995 nt (start:1671, end:1650) A=5070776 nt (start:2921094, end:2921073) CALCULATED DISTANCE APART: -2902765 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.70 -> -177234 <- tig#100, B=236880 nt (start:95547, end:95526) A=122157 nt (start:101687, end:101666) CALCULATED DISTANCE APART: -177234 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGCAAAATGATTGAAAAGAAC - AGAACCAGTGATTAGGTATGG) on contig 15 (3712591 nt) Astart:3352472 Aend:3352493 Bstart:3377458 Bend:3377437 CALCULATED DISTANCE APART: 24986 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#5 -> -5542232 <- tig#7, B=3689108 nt (start:381183, end:381204) A=3534247 nt (start:2254307, end:2254286) CALCULATED DISTANCE APART: -5542232 < -2000 Pairs unsatisfied in distance within a contig. Pair (CGGGAGAGAACTCGATCATTG - ATGGGCATATATATTGGTTGA) on contig 5 (3689108 nt) Astart:1170162 Aend:1170183 Bstart:1185297 Bend:1185276 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#64 -> -210549 <- tig#109, B=211265 nt (start:807, end:828) A=66564 nt (start:20091, end:20070) CALCULATED DISTANCE APART: -210549 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#19 -> -1649636 <- tig#31, A=3531543 nt (start:1879042, end:1879063) B=976128 nt (start:17135, end:17114) CALCULATED DISTANCE APART: -1649636 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#64 -> -218030 <- tig#r.139, A=211265 nt (start:2, end:23) B=27696 nt (start:929, end:950) CALCULATED DISTANCE APART: -218030 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#19 -> -2851664 <- tig#6, A=3531543 nt (start:708397, end:708418) B=6870868 nt (start:48518, end:48497) CALCULATED DISTANCE APART: -2851664 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.48 -> -3108447 <- tig#12, B=487359 nt (start:404698, end:404677) A=2766197 nt (start:2723749, end:2723728) CALCULATED DISTANCE APART: -3108447 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATATATTAAATCGGTCATCAC - TTTTCTCTTAACACATGTTAT) on contig 6 (6870868 nt) Astart:1137959 Aend:1137938 Bstart:1129532 Bend:1129553 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig. Pair (TCGATTTGGTAAAACTTGTTG - TCATATATACACACTGATGCT) on contig 2 (5014909 nt) Astart:1268866 Aend:1268887 Bstart:1283528 Bend:1283507 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.58 -> -1866109 <- tig#19, B=374416 nt (start:14261, end:14240) A=3531543 nt (start:1871848, end:1871827) CALCULATED DISTANCE APART: -1866109 < -2000 Pairs unsatisfied in distance within a contig. Pair (GAGGTTTACACCTAATATGAT - CTCTGCAATGACCTCCTGAGT) on contig 1 (4853111 nt) Astart:346970 Aend:346991 Bstart:392247 Bend:392226 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#283 -> -3818458 <- tig#2, A=1768 nt (start:613, end:634) B=5014909 nt (start:3837303, end:3837282) CALCULATED DISTANCE APART: -3818458 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728428, end:728449) A=1096 nt (start:513, end:492) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#46 -> -3136021 <- tig#r.7, A=577887 nt (start:341058, end:341079) B=3534247 nt (start:615055, end:615076) CALCULATED DISTANCE APART: -3136021 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAAAGTTGGATTATGTAAAGT - TGATGATGTTGTTTCCCGACT) on contig 14 (2271162 nt) Astart:1739882 Aend:1739903 Bstart:2002454 Bend:2002433 CALCULATED DISTANCE APART: 262572 Pairs unsatisfied in distance within a contig. Pair (CGCAAACGCAAACCATATGCA - TTTTTGTTAAATCTTTTACTT) on contig 5 (3689108 nt) Astart:1171682 Aend:1171703 Bstart:1186818 Bend:1186797 CALCULATED DISTANCE APART: 15136 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#14 -> -765455 <- tig#43, B=2271162 nt (start:2083009, end:2083030) A=1235946 nt (start:597302, end:597281) CALCULATED DISTANCE APART: -765455 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2090, end:2111) A=258385 nt (start:626, end:605) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#11 -> -4878223 <- tig#29, A=4628067 nt (start:683803, end:683824) B=1463708 nt (start:953959, end:953938) CALCULATED DISTANCE APART: -4878223 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CCATTCCTCATGTTTTGCCTC - CGTCGTCTCCTACAATACCTC) on contig 9 (3747885 nt) Astart:2878259 Aend:2878238 Bstart:2862906 Bend:2862885 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219236, end:4219215) A=2598 nt (start:2385, end:2364) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -1082722 <- tig#31, A=736718 nt (start:242212, end:242233) B=976128 nt (start:608216, end:608195) CALCULATED DISTANCE APART: -1082722 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#8 -> -4732278 <- tig#4, B=5070776 nt (start:760743, end:760764) A=3837743 nt (start:442245, end:442224) CALCULATED DISTANCE APART: -4732278 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#33 -> -492044 <- tig#32, A=1290487 nt (start:1236027, end:1236048) B=972151 nt (start:457584, end:457563) CALCULATED DISTANCE APART: -492044 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#22 -> -6369409 <- tig#6, B=1636463 nt (start:14208, end:14229) A=6870868 nt (start:4767154, end:4767133) CALCULATED DISTANCE APART: -6369409 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -40662 <- tig#443, A=736718 nt (start:676376, end:676397) B=1213 nt (start:320, end:299) CALCULATED DISTANCE APART: -40662 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135408, end:135429) B=15068 nt (start:2268, end:2289) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TAATTAGTGCTTAGAGCGATC - GGCAAATGAGACTTCCCCTCT) on contig 19 (3531543 nt) Astart:3058098 Aend:3058077 Bstart:3050622 Bend:3050601 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#305 -> -2202335 <- tig#r.19, A=1638 nt (start:127, end:148) B=3531543 nt (start:1310719, end:1310740) CALCULATED DISTANCE APART: -2202335 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#92 -> -2121566 <- tig#16, B=101136 nt (start:3373, end:3394) A=2098954 nt (start:2043803, end:2043782) CALCULATED DISTANCE APART: -2121566 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#131 -> -2484262 <- tig#12, B=36503 nt (start:14512, end:14533) A=2766197 nt (start:2482271, end:2482250) CALCULATED DISTANCE APART: -2484262 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AATTTAGAATTTTTATTTCGA - TGTGAAAAACTATGCGACTAG) on contig 19 (3531543 nt) Astart:3058703 Aend:3058682 Bstart:3050017 Bend:3049996 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10573, end:10552) A=2766197 nt (start:2150990, end:2150969) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#54 -> -104185 <- tig#71, B=625914 nt (start:572696, end:572717) A=271268 nt (start:70967, end:70946) CALCULATED DISTANCE APART: -104185 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:134578, end:134599) B=15068 nt (start:3098, end:3119) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTTCCCTCTTGATGACACCCC - GGGAATGAAAGAAGAAGGTGT) on contig 15 (3712591 nt) Astart:3352297 Aend:3352318 Bstart:3377283 Bend:3377262 CALCULATED DISTANCE APART: 24986 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#102 -> -30448 <- tig#r.7, A=83426 nt (start:42608, end:42629) B=3534247 nt (start:3524617, end:3524638) CALCULATED DISTANCE APART: -30448 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#1 -> -5135898 <- tig#2, A=4853111 nt (start:4483296, end:4483317) B=5014909 nt (start:4786083, end:4786062) CALCULATED DISTANCE APART: -5135898 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#74 -> -258227 <- tig#56, B=238371 nt (start:59076, end:59097) A=262460 nt (start:98932, end:98911) CALCULATED DISTANCE APART: -258227 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATATCAAATTTTTTATAACTA - TGATAAGCTTCAATGTTGACA) on contig 13 (2650694 nt) Astart:1947150 Aend:1947171 Bstart:1962798 Bend:1962777 CALCULATED DISTANCE APART: 15648 Pairs unsatisfied in distance within a contig. Pair (TCGTAATGTAATCGTGTCACT - AATATCTGAAACTCTCTTCAT) on contig 34 (1705564 nt) Astart:679589 Aend:679568 Bstart:664626 Bend:664647 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260112, end:2260133) B=356404 nt (start:343112, end:343133) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260547, end:2260568) B=356404 nt (start:342677, end:342698) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#145 -> -53311 <- tig#51, A=21756 nt (start:14298, end:14319) B=875428 nt (start:65853, end:65832) CALCULATED DISTANCE APART: -53311 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.409 -> -1019852 <- tig#23, B=1303 nt (start:931, end:910) A=1345436 nt (start:1038921, end:1038900) CALCULATED DISTANCE APART: -1019852 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#39 -> -357382 <- tig#r.48, A=736718 nt (start:457841, end:457862) B=487359 nt (start:388854, end:388875) CALCULATED DISTANCE APART: -357382 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4186044, end:4186023) A=3712591 nt (start:517, end:496) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCGTAATTGGCCCACTATTCT - CTTTAATTTATTTAAAGTAGT) on contig 34 (1705564 nt) Astart:680099 Aend:680078 Bstart:665136 Bend:665157 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.409 -> -1019852 <- tig#23, B=1303 nt (start:761, end:740) A=1345436 nt (start:1039091, end:1039070) CALCULATED DISTANCE APART: -1019852 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.403 -> -2330792 <- tig#13, B=1321 nt (start:920, end:899) A=2650694 nt (start:2349872, end:2349851) CALCULATED DISTANCE APART: -2330792 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#11 -> -4257877 <- tig#r.48, A=4628067 nt (start:450497, end:450518) B=487359 nt (start:387052, end:387073) CALCULATED DISTANCE APART: -4257877 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#95 -> -23973 <- tig#49, B=92653 nt (start:92564, end:92585) A=399963 nt (start:43884, end:43863) CALCULATED DISTANCE APART: -23973 < -2000 Pairs unsatisfied in distance within a contig. Pair (CCTGCTTCCAAAAAAATCATT - AACTTATTTGTTTTAACAATA) on contig 5 (3689108 nt) Astart:1178412 Aend:1178391 Bstart:1163278 Bend:1163299 CALCULATED DISTANCE APART: 15134 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259907, end:2259928) B=356404 nt (start:343317, end:343338) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2261027, end:2261048) B=356404 nt (start:342197, end:342218) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTAAAACTACATATGTCTATA - TAGAACTTCTCGTTTTTGGAA) on contig 5 (3689108 nt) Astart:1169467 Aend:1169488 Bstart:1184602 Bend:1184581 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460359, end:460338) A=1345436 nt (start:25301, end:25280) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.34 -> -1666242 <- tig#93, B=1705564 nt (start:1679304, end:1679283) A=152036 nt (start:6938, end:6917) CALCULATED DISTANCE APART: -1666242 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185694, end:4185673) A=3712591 nt (start:867, end:846) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#39 -> -3129050 <- tig#r.12, A=736718 nt (start:271372, end:271393) B=2766197 nt (start:82493, end:82514) CALCULATED DISTANCE APART: -3129050 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.40 -> -1061531 <- tig#32, B=668174 nt (start:175134, end:175113) A=972151 nt (start:906397, end:906376) CALCULATED DISTANCE APART: -1061531 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GGCGGATGCTTCGGCTACAGC - CAAAGGTAACATAATCTTATT) on contig 15 (3712591 nt) Astart:1718698 Aend:1718719 Bstart:1729320 Bend:1729341 Pairs unsatisfied in distance within a contig. Pair (ATTAATACTGACTTATTGTTC - CATCTCTGTTGTGTCGCTCGA) on contig 41 (667251 nt) Astart:88413 Aend:88392 Bstart:75733 Bend:75754 CALCULATED DISTANCE APART: 12680 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#54 -> -327960 <- tig#r.53, A=625914 nt (start:324332, end:324353) B=354284 nt (start:307906, end:307927) CALCULATED DISTANCE APART: -327960 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#118 -> -33564 <- tig#97, B=66247 nt (start:38287, end:38308) A=91050 nt (start:25604, end:25583) CALCULATED DISTANCE APART: -33564 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.42 -> -1433157 <- tig#20, B=659641 nt (start:2308, end:2287) A=2328057 nt (start:1450849, end:1450828) CALCULATED DISTANCE APART: -1433157 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730882, end:730903) B=3531543 nt (start:3200456, end:3200435) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -1278600 <- tig#20, A=736718 nt (start:271417, end:271438) B=2328057 nt (start:833299, end:833278) CALCULATED DISTANCE APART: -1278600 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AACAAATTGTTTCATGTCTAT - ATATATATTCTCTTATCTAAG) on contig 19 (3531543 nt) Astart:3060346 Aend:3060325 Bstart:3048377 Bend:3048356 Pairs unsatisfied in pairing logic within a contig. Pair (AGATGTATATATATAGAGAGA - AAAAACAGCAAACAGAGATTA) on contig 19 (3531543 nt) Astart:3058883 Aend:3058862 Bstart:3049837 Bend:3049816 Pairs unsatisfied in distance within a contig. Pair (GGGCTGCAGAGAGACAAGGAT - GTTTTAAAGTGAAAAAGTACT) on contig 1 (4853111 nt) Astart:346645 Aend:346666 Bstart:391922 Bend:391901 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig. Pair (ATGAAAGCTTTCGCTGCTGCG - CATTTTTGTCAACCCATGATG) on contig 1 (4853111 nt) Astart:346800 Aend:346821 Bstart:392077 Bend:392056 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33664, end:33643) A=855454 nt (start:18785, end:18764) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig. Pair (CAGAGCTAATTCACAACTCAA - TTGCGCTGTTGAAACTATTAG) on contig 2 (5014909 nt) Astart:1268791 Aend:1268812 Bstart:1283453 Bend:1283432 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#75 -> -1731898 <- tig#19, A=373953 nt (start:296416, end:296437) B=3531543 nt (start:1674361, end:1674340) CALCULATED DISTANCE APART: -1731898 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.364 -> -57406 <- tig#98, B=1417 nt (start:1388, end:1367) A=88184 nt (start:76018, end:75997) CALCULATED DISTANCE APART: -57406 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#34 -> -332091 <- tig#53, A=1705564 nt (start:1679273, end:1679294) B=354284 nt (start:325800, end:325779) CALCULATED DISTANCE APART: -332091 < -2000 Pairs unsatisfied in distance within a contig. Pair (GATCTTAAAGGCGTAAGAATT - GATACAATTCTTACGCCTTTA) on contig 34 (1705564 nt) Astart:1679273 Aend:1679294 Bstart:1679299 Bend:1679278 CALCULATED DISTANCE APART: 26 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.1 -> -3126478 <- tig#26, B=4853111 nt (start:2576316, end:2576295) A=1332708 nt (start:570162, end:570141) CALCULATED DISTANCE APART: -3126478 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#305 -> -2202335 <- tig#r.19, A=1638 nt (start:267, end:288) B=3531543 nt (start:1310579, end:1310600) CALCULATED DISTANCE APART: -2202335 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#40 -> -2348094 <- tig#7, B=668174 nt (start:554937, end:554958) A=3534247 nt (start:2254857, end:2254836) CALCULATED DISTANCE APART: -2348094 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.291 -> -2024000 <- tig#16, B=1714 nt (start:348, end:327) A=2098954 nt (start:2043652, end:2043631) CALCULATED DISTANCE APART: -2024000 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459764, end:459743) A=1345436 nt (start:25896, end:25875) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATGGGTTTGTGGCTAAACAAA - CATTGCAACAATATACAACAC) on contig 60 (232804 nt) Astart:31247 Aend:31268 Bstart:57525 Bend:57504 CALCULATED DISTANCE APART: 26278 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460419, end:460398) A=1345436 nt (start:25241, end:25220) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136753, end:136774) B=15068 nt (start:923, end:944) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig. Pair (ACTTCACATTCCGTCGATGAA - TCTTTCTTGCTTCATTGTTCA) on contig 6 (6870868 nt) Astart:1138179 Aend:1138158 Bstart:1129752 Bend:1129773 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260972, end:2260993) B=356404 nt (start:342252, end:342273) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.107 -> -4786612 <- tig#6, B=68734 nt (start:38136, end:38115) A=6870868 nt (start:4768476, end:4768455) CALCULATED DISTANCE APART: -4786612 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#26 -> -90650 <- tig#95, B=1332708 nt (start:1310673, end:1310694) A=92653 nt (start:88615, end:88594) CALCULATED DISTANCE APART: -90650 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#2 -> -6085454 <- tig#25, A=5014909 nt (start:11415, end:11436) B=1290536 nt (start:1101960, end:1101939) CALCULATED DISTANCE APART: -6085454 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#6 -> -40182 <- tig#91, A=6870868 nt (start:6825856, end:6825877) B=101959 nt (start:15170, end:15149) CALCULATED DISTANCE APART: -40182 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.35 -> -676591 <- tig#2, B=1135475 nt (start:599340, end:599319) A=5014909 nt (start:97251, end:97230) CALCULATED DISTANCE APART: -676591 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#11 -> -4878197 <- tig#29, A=4628067 nt (start:684599, end:684620) B=1463708 nt (start:954729, end:954708) CALCULATED DISTANCE APART: -4878197 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#81 -> -2917593 <- tig#r.7, A=258617 nt (start:239370, end:239391) B=3534247 nt (start:615901, end:615922) CALCULATED DISTANCE APART: -2917593 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#74 -> -258383 <- tig#56, A=238371 nt (start:58936, end:58957) B=262460 nt (start:98948, end:98927) CALCULATED DISTANCE APART: -258383 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTTCATTAATATATATCTTAG - TTTCCAACAGTGGCTGAAAAT) on contig 15 (3712591 nt) Astart:1717713 Aend:1717734 Bstart:1730305 Bend:1730326 Pairs unsatisfied in distance within a contig. Pair (CCAAGTATTATATCAATGAGA - ATGTTAAGCTTCTTCGTGAGC) on contig 2 (5014909 nt) Astart:1269031 Aend:1269052 Bstart:1283693 Bend:1283672 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460829, end:460808) A=1345436 nt (start:24831, end:24810) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#80 -> -35133 <- tig#65, B=191116 nt (start:162670, end:162691) A=286124 nt (start:26687, end:26666) CALCULATED DISTANCE APART: -35133 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730687, end:730708) B=3531543 nt (start:3200261, end:3200240) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig. Pair (GGCATACCAGGTAACTGGAGA - TGGGTACTCTTCACGGATCTT) on contig 4 (3837743 nt) Astart:1822734 Aend:1822713 Bstart:1799659 Bend:1799680 CALCULATED DISTANCE APART: 23075 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.6 -> -5416205 <- tig#35, B=6870868 nt (start:4671709, end:4671688) A=1135475 nt (start:764496, end:764475) CALCULATED DISTANCE APART: -5416205 < -2000 Pairs unsatisfied in distance within a contig. Pair (GCCATTTCTTTTTGATGAGTC - CATGTTGAAATGTATTAGCTT) on contig 37 (853709 nt) Astart:537767 Aend:537788 Bstart:550437 Bend:550416 CALCULATED DISTANCE APART: 12670 Pairs unsatisfied in pairing logic within a contig. Pair (CAGTAGTCGAGTGGGTTAAAA - TAAGCTATATGCTATTCATAG) on contig 15 (3712591 nt) Astart:1719098 Aend:1719119 Bstart:1728920 Bend:1728941 Pairs unsatisfied in distance within a contig. Pair (CTCATGACCAAGTCTCATCAT - GGTGATGAGGAGTAATGCTGC) on contig 25 (1290536 nt) Astart:990289 Aend:990268 Bstart:975755 Bend:975776 CALCULATED DISTANCE APART: 14534 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730967, end:730988) B=3531543 nt (start:3200541, end:3200520) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#139 -> -6248 <- tig#57, A=27696 nt (start:8754, end:8775) B=258385 nt (start:7306, end:7285) CALCULATED DISTANCE APART: -6248 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCGCCCACATTTTTCACAACC - GTGTATACATGTTACTAGTAC) on contig 10 (3047199 nt) Astart:790164 Aend:790143 Bstart:766424 Bend:766445 CALCULATED DISTANCE APART: 23740 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#54 -> -104185 <- tig#71, B=625914 nt (start:572701, end:572722) A=271268 nt (start:70972, end:70951) CALCULATED DISTANCE APART: -104185 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.257 -> -2902765 <- tig#8, B=1995 nt (start:1101, end:1080) A=5070776 nt (start:2921664, end:2921643) CALCULATED DISTANCE APART: -2902765 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -1168778 <- tig#384, A=5070776 nt (start:3882300, end:3882321) B=1359 nt (start:302, end:281) CALCULATED DISTANCE APART: -1168778 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTAAGTGTAATTCTCAGGAGT - ATCGATGTTAACAAATATCTT) on contig 15 (3712591 nt) Astart:1719018 Aend:1719039 Bstart:1729000 Bend:1729021 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -4201 <- tig#r.96, A=262460 nt (start:244401, end:244422) B=91302 nt (start:85160, end:85181) CALCULATED DISTANCE APART: -4201 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259852, end:2259873) B=356404 nt (start:343372, end:343393) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185784, end:4185763) A=3712591 nt (start:777, end:756) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTAGCTTTGTGGTAGAGAAAG - CTCTGAATAACACGGAATTCT) on contig 19 (3531543 nt) Astart:3059038 Aend:3059017 Bstart:3049682 Bend:3049661 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082582, end:2082603) B=976128 nt (start:960940, end:960961) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTGTATGCAACACACACTCTC - ATTACTTATATGTTTTGGAAG) on contig 10 (3047199 nt) Astart:790144 Aend:790123 Bstart:776256 Bend:776277 CALCULATED DISTANCE APART: 13888 Pairs unsatisfied in pairing logic within a contig. Pair (GATAAGGAAACAACAAGATGT - AGATTAGATAGCCAAAACAAG) on contig 19 (3531543 nt) Astart:3058898 Aend:3058877 Bstart:3049822 Bend:3049801 Pairs unsatisfied in pairing logic within a contig. Pair (GAGAACGCAGAGGCGCCACAA - TTTGGTTTTAAGTATTACTAG) on contig 15 (3712591 nt) Astart:1716598 Aend:1716619 Bstart:1731420 Bend:1731441 Pairs unsatisfied in pairing logic within a contig. Pair (TAGTATTTGTTTCCTGTTAAT - ATTTGACGAAATCTTAATAAA) on contig 19 (3531543 nt) Astart:3058628 Aend:3058607 Bstart:3050092 Bend:3050071 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10158, end:10137) A=2766197 nt (start:2151405, end:2151384) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282812, end:282833) B=2196 nt (start:993, end:972) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#14 -> -765455 <- tig#43, B=2271162 nt (start:2082934, end:2082955) A=1235946 nt (start:597227, end:597206) CALCULATED DISTANCE APART: -765455 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#27 -> -2274981 <- tig#14, A=1227811 nt (start:935479, end:935500) B=2271162 nt (start:2002649, end:2002628) CALCULATED DISTANCE APART: -2274981 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#103 -> -852675 <- tig#r.40, A=211876 nt (start:6538, end:6559) B=668174 nt (start:837, end:858) CALCULATED DISTANCE APART: -852675 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#8 -> -3464017 <- tig#r.65, A=5070776 nt (start:1617063, end:1617084) B=286124 nt (start:255820, end:255841) CALCULATED DISTANCE APART: -3464017 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728683, end:728704) A=1096 nt (start:768, end:747) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CCGGCCGTTGTTCTGACTCTT - ATGTTTGATTTTCCTACATGT) on contig 19 (3531543 nt) Astart:3060156 Aend:3060135 Bstart:3048567 Bend:3048546 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#57 -> -4506482 <- tig#r.11, A=258385 nt (start:255846, end:255867) B=4628067 nt (start:104124, end:104145) CALCULATED DISTANCE APART: -4506482 < -2000 Pairs unsatisfied in distance within a contig. Pair (ACGCTCCAAAATCGGGATGCT - AGACTAATCTTACTTTTATGG) on contig 15 (3712591 nt) Astart:3352262 Aend:3352283 Bstart:3377248 Bend:3377227 CALCULATED DISTANCE APART: 24986 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#47 -> -398721 <- tig#140, A=471458 nt (start:64447, end:64468) B=26310 nt (start:11710, end:11689) CALCULATED DISTANCE APART: -398721 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATTTGAGATGGCTTGGTATGG - CACATAAGCGACAACCATATC) on contig 5 (3689108 nt) Astart:1169792 Aend:1169813 Bstart:1184927 Bend:1184906 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in pairing logic within a contig. Pair (TCGTGGTTTAATATTGGTTTA - TGTTATAAATATTGAGTCAGA) on contig 51 (875428 nt) Astart:133686 Aend:133665 Bstart:867760 Bend:867739 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#34 -> -1056103 <- tig#r.65, A=1705564 nt (start:662491, end:662512) B=286124 nt (start:253094, end:253115) CALCULATED DISTANCE APART: -1056103 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#49 -> -1152645 <- tig#r.43, A=399963 nt (start:351811, end:351832) B=1235946 nt (start:111453, end:111474) CALCULATED DISTANCE APART: -1152645 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#12 -> -429966 <- tig#72, B=2766197 nt (start:2422243, end:2422264) A=172011 nt (start:106012, end:105991) CALCULATED DISTANCE APART: -429966 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460169, end:460148) A=1345436 nt (start:25491, end:25470) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAGATTGGTGTTGAAACCATT - ACGAGAGACAGGACAATGACC) on contig 1 (4853111 nt) Astart:346875 Aend:346896 Bstart:392152 Bend:392131 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -47884 <- tig#129, A=354284 nt (start:325783, end:325804) B=39603 nt (start:39383, end:39362) CALCULATED DISTANCE APART: -47884 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#120 -> -1341554 <- tig#29, B=44710 nt (start:43312, end:43333) A=1463708 nt (start:1360156, end:1360135) CALCULATED DISTANCE APART: -1341554 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459604, end:459583) A=1345436 nt (start:26056, end:26035) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GGACCATTGTACTATAAAAAG - CAAGGAGAGTTTATGATGAGA) on contig 15 (3712591 nt) Astart:1717963 Aend:1717984 Bstart:1730055 Bend:1730076 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#52 -> -353986 <- tig#1, B=356404 nt (start:84, end:105) A=4853111 nt (start:17666, end:17645) CALCULATED DISTANCE APART: -353986 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3583 <- tig#26, B=1171658 nt (start:1171138, end:1171159) A=1332708 nt (start:23063, end:23042) CALCULATED DISTANCE APART: -3583 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#120 -> -1341554 <- tig#29, B=44710 nt (start:43787, end:43808) A=1463708 nt (start:1360631, end:1360610) CALCULATED DISTANCE APART: -1341554 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.1 -> -4590180 <- tig#16, B=4853111 nt (start:3208332, end:3208311) A=2098954 nt (start:1401848, end:1401827) CALCULATED DISTANCE APART: -4590180 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.46 -> -315723 <- tig#41, B=577887 nt (start:160323, end:160302) A=667251 nt (start:175400, end:175379) CALCULATED DISTANCE APART: -315723 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219151, end:4219130) A=2598 nt (start:2470, end:2449) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#64 -> -210568 <- tig#109, B=211265 nt (start:48, end:69) A=66564 nt (start:19351, end:19330) CALCULATED DISTANCE APART: -210568 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.12 -> -2596334 <- tig#32, B=2766197 nt (start:2585419, end:2585398) A=972151 nt (start:30915, end:30894) CALCULATED DISTANCE APART: -2596334 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#7 -> -2854909 <- tig#r.68, A=3534247 nt (start:666182, end:666203) B=189499 nt (start:182655, end:182676) CALCULATED DISTANCE APART: -2854909 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TGGTTTGACTATATATGGATC - TTGCGCAAGTCTCCAGTTAGT) on contig 19 (3531543 nt) Astart:3059761 Aend:3059740 Bstart:3048962 Bend:3048941 Pairs unsatisfied in distance within a contig. Pair (AGTTTGTATGTTTTGTTGTGT - ATTTTTATTCCACTCATTCTT) on contig 5 (3689108 nt) Astart:1178337 Aend:1178316 Bstart:1163203 Bend:1163224 CALCULATED DISTANCE APART: 15134 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12921, end:12900) A=91302 nt (start:11272, end:11251) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12161, end:12140) A=91302 nt (start:12032, end:12011) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#33 -> -492044 <- tig#32, A=1290487 nt (start:1235927, end:1235948) B=972151 nt (start:457484, end:457463) CALCULATED DISTANCE APART: -492044 < -2000 Pairs unsatisfied in distance within a contig. Pair (AATACCTCGAGGATATAATTG - ATATTGATCTAAAATCATTTA) on contig 2 (5014909 nt) Astart:1269276 Aend:1269297 Bstart:1283938 Bend:1283917 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig. Pair (GATCGAAAGCGTGAGACAAGA - CTTGCAAAGAAGCAAGAAAGC) on contig 15 (3712591 nt) Astart:3352522 Aend:3352543 Bstart:3377508 Bend:3377487 CALCULATED DISTANCE APART: 24986 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -214288 <- tig#6, A=354284 nt (start:132849, end:132870) B=6870868 nt (start:12853, end:12832) CALCULATED DISTANCE APART: -214288 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:134768, end:134789) B=15068 nt (start:2908, end:2929) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTTCATTCATAGAAAGACAGT - TTATGGATCTAATGTCGACCT) on contig 5 (3689108 nt) Astart:1169322 Aend:1169343 Bstart:1184457 Bend:1184436 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#28 -> -1368002 <- tig#7, A=1171658 nt (start:256496, end:256517) B=3534247 nt (start:472840, end:472819) CALCULATED DISTANCE APART: -1368002 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#53 -> -314812 <- tig#75, B=354284 nt (start:24619, end:24640) A=373953 nt (start:5147, end:5126) CALCULATED DISTANCE APART: -314812 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#26 -> -90650 <- tig#95, B=1332708 nt (start:1310403, end:1310424) A=92653 nt (start:88345, end:88324) CALCULATED DISTANCE APART: -90650 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.6 -> -5416205 <- tig#35, B=6870868 nt (start:4672119, end:4672098) A=1135475 nt (start:764086, end:764065) CALCULATED DISTANCE APART: -5416205 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282522, end:282543) B=2196 nt (start:703, end:682) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGAAAGCAGAATCTTGAAGCC - ATGACTCTTGCTGTACGGGAA) on contig 6 (6870868 nt) Astart:1137819 Aend:1137798 Bstart:1129392 Bend:1129413 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#25 -> -1269344 <- tig#r.12, A=1290536 nt (start:70846, end:70867) B=2766197 nt (start:2696543, end:2696564) CALCULATED DISTANCE APART: -1269344 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GGTGGCGGTCAATGCTGGAGT - TCGATATCAAAATTACTTTAT) on contig 15 (3712591 nt) Astart:1718788 Aend:1718809 Bstart:1729230 Bend:1729251 Pairs unsatisfied in distance within a contig. Pair (TATAGACTCAAATTCACTTCC - TAAGAAGCTGTAAAAATCAGA) on contig 6 (6870868 nt) Astart:1138444 Aend:1138423 Bstart:1130017 Bend:1130038 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig. Pair (TTTTAGGGAAAAAAAAAACTC - AAAACCAATAGAAGAATTCCA) on contig 118 (66247 nt) Astart:5084 Aend:5063 Bstart:186 Bend:207 CALCULATED DISTANCE APART: 4898 Pairs unsatisfied in distance within a contig. Pair (GAATTTTATTTCCTGTTTTAC - CTGCAGCAACAGATGCATACT) on contig 46 (577887 nt) Astart:183340 Aend:183361 Bstart:200790 Bend:200769 CALCULATED DISTANCE APART: 17450 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -2461734 <- tig#10, A=736718 nt (start:310618, end:310639) B=3047199 nt (start:2055634, end:2055613) CALCULATED DISTANCE APART: -2461734 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#103 -> -216461 <- tig#48, A=211876 nt (start:14534, end:14555) B=487359 nt (start:39119, end:39098) CALCULATED DISTANCE APART: -216461 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#53 -> -314811 <- tig#75, B=354284 nt (start:24899, end:24920) A=373953 nt (start:5426, end:5405) CALCULATED DISTANCE APART: -314811 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#57 -> -2800746 <- tig#3, B=258385 nt (start:190682, end:190703) A=3889482 nt (start:2753043, end:2753022) CALCULATED DISTANCE APART: -2800746 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.38 -> -7439695 <- tig#6, B=1143067 nt (start:803177, end:803156) A=6870868 nt (start:6656518, end:6656497) CALCULATED DISTANCE APART: -7439695 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGATCAAAATATATACAATTC - AATTATAATGAACAAGTACAT) on contig 37 (853709 nt) Astart:838669 Aend:838648 Bstart:823164 Bend:823185 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in distance within a contig. Pair (CTATTTTGAAACCATAGAAAA - TGTTCATAGAAGTTTCTGGGA) on contig 6 (6870868 nt) Astart:1138769 Aend:1138748 Bstart:1130314 Bend:1130335 CALCULATED DISTANCE APART: 8455 Pairs unsatisfied in pairing logic within a contig. Pair (CGGAGGATTCGGGTCGAAACA - CGTTAGGTTTAATAAAAATCA) on contig 15 (3712591 nt) Astart:1718208 Aend:1718229 Bstart:1729810 Bend:1729831 Pairs unsatisfied in distance within a contig. Pair (TTTTCCATTGACTTTTTGTCG - AAAATATTCGAAAACAATGCT) on contig 74 (238371 nt) Astart:26392 Aend:26413 Bstart:34936 Bend:34915 CALCULATED DISTANCE APART: 8544 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136188, end:136209) B=15068 nt (start:1488, end:1509) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig. Pair (GCATACTTGGGAAGCGTGTCC - TGATGTAGAGAGTTGCAGAGA) on contig 15 (3712591 nt) Astart:3350135 Aend:3350156 Bstart:3375123 Bend:3375102 CALCULATED DISTANCE APART: 24988 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.409 -> -1019852 <- tig#23, B=1303 nt (start:756, end:735) A=1345436 nt (start:1039096, end:1039075) CALCULATED DISTANCE APART: -1019852 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTCTTGATTTTCTGGTTCCTC - ATTCGGAAGGGAGATTATTAC) on contig 5 (3689108 nt) Astart:1170242 Aend:1170263 Bstart:1185377 Bend:1185356 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig. Pair (CAGAGCATTTAAGGCAAAACC - AAATAAGCTGAGATAGAGTGC) on contig 27 (1227811 nt) Astart:434585 Aend:434606 Bstart:450838 Bend:450817 CALCULATED DISTANCE APART: 16253 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#52 -> -355614 <- tig#3, B=356404 nt (start:97, end:118) A=3889482 nt (start:19307, end:19286) CALCULATED DISTANCE APART: -355614 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATGGGTACGAAAGGTCTATTG - AAGCGGTTGATACATCGAGTT) on contig 1 (4853111 nt) Astart:346755 Aend:346776 Bstart:392032 Bend:392011 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -322558 <- tig#r.572, A=2650694 nt (start:2308725, end:2308746) B=1031 nt (start:442, end:463) CALCULATED DISTANCE APART: -322558 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#3 -> -3618470 <- tig#27, B=3889482 nt (start:316519, end:316540) A=1227811 nt (start:65507, end:65486) CALCULATED DISTANCE APART: -3618470 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459874, end:459853) A=1345436 nt (start:25786, end:25765) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig. Pair (GAGAGAGTCCAAAAGAGGCAA - TTCGTGTCATGCAGGAAAACC) on contig 6 (6870868 nt) Astart:1137984 Aend:1137963 Bstart:1129557 Bend:1129578 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#127 -> -57440 <- tig#17, B=80830 nt (start:63270, end:63291) A=1959065 nt (start:59880, end:59859) CALCULATED DISTANCE APART: -57440 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#9 -> -2729016 <- tig#69, A=3747885 nt (start:1134548, end:1134569) B=186132 nt (start:135679, end:135658) CALCULATED DISTANCE APART: -2729016 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460734, end:460713) A=1345436 nt (start:24926, end:24905) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GGTATACAAACTTCACATGAA - GTTGTTCGGGATGGCTTAGAG) on contig 19 (3531543 nt) Astart:3059696 Aend:3059675 Bstart:3049027 Bend:3049006 Pairs unsatisfied in pairing logic within a contig. Pair (AATGTAACATTTTGTTAACTA - CTAGATTTAAGGAAACTTTAC) on contig 15 (3712591 nt) Astart:1719183 Aend:1719204 Bstart:1728835 Bend:1728856 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -40662 <- tig#443, A=736718 nt (start:676961, end:676982) B=1213 nt (start:905, end:884) CALCULATED DISTANCE APART: -40662 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTCTTCCAAGTATTATATCAA - AAGCTTCTTCGTGAGCTTAGA) on contig 2 (5014909 nt) Astart:1269026 Aend:1269047 Bstart:1283688 Bend:1283667 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#2 -> -4867530 <- tig#r.7, A=5014909 nt (start:136094, end:136115) B=3534247 nt (start:3525532, end:3525553) CALCULATED DISTANCE APART: -4867530 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#34 -> -1107967 <- tig#79, A=1705564 nt (start:661836, end:661857) B=136600 nt (start:84239, end:84218) CALCULATED DISTANCE APART: -1107967 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTTCGGAGTTAGGTCCGGAGG - AAATCATATAATTACCGATCT) on contig 15 (3712591 nt) Astart:1718193 Aend:1718214 Bstart:1729825 Bend:1729846 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#5 -> -5542227 <- tig#7, B=3689108 nt (start:381463, end:381484) A=3534247 nt (start:2254582, end:2254561) CALCULATED DISTANCE APART: -5542227 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.77 -> -19926 <- tig#74, B=160344 nt (start:13512, end:13491) A=238371 nt (start:26414, end:26393) CALCULATED DISTANCE APART: -19926 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#14 -> -765455 <- tig#43, B=2271162 nt (start:2082994, end:2083015) A=1235946 nt (start:597287, end:597266) CALCULATED DISTANCE APART: -765455 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -25645 <- tig#98, A=354284 nt (start:325776, end:325797) B=88184 nt (start:17137, end:17116) CALCULATED DISTANCE APART: -25645 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GATTCTCCCGGTAAATTGGTT - ACATCTTGTAGTTTATTCCAC) on contig 4 (3837743 nt) Astart:2358571 Aend:2358592 Bstart:2359491 Bend:2359512 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.6 -> -5416200 <- tig#35, B=6870868 nt (start:4671954, end:4671933) A=1135475 nt (start:764246, end:764225) CALCULATED DISTANCE APART: -5416200 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260277, end:2260298) B=356404 nt (start:342947, end:342968) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#46 -> -523124 <- tig#r.48, A=577887 nt (start:135270, end:135291) B=487359 nt (start:386852, end:386873) CALCULATED DISTANCE APART: -523124 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260107, end:2260128) B=356404 nt (start:343117, end:343138) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig. Pair (ACACAAAATATCTAGAAATCT - ATAACCGAAAGATAGAATAGA) on contig 13 (2650694 nt) Astart:1947185 Aend:1947206 Bstart:1962833 Bend:1962812 CALCULATED DISTANCE APART: 15648 Pairs unsatisfied in distance within a contig. Pair (AATCTATGCATTTGTACTGTT - ATAAACTACTCGTCGACAATC) on contig 2 (5014909 nt) Astart:1269346 Aend:1269367 Bstart:1284008 Bend:1283987 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3583 <- tig#26, B=1171658 nt (start:1171358, end:1171379) A=1332708 nt (start:23283, end:23262) CALCULATED DISTANCE APART: -3583 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#207 -> -28665 <- tig#49, B=5890 nt (start:502, end:523) A=399963 nt (start:43277, end:43256) CALCULATED DISTANCE APART: -28665 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#77 -> -2349097 <- tig#12, A=160344 nt (start:13495, end:13516) B=2766197 nt (start:2222248, end:2222227) CALCULATED DISTANCE APART: -2349097 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#46 -> -3144173 <- tig#12, B=577887 nt (start:138558, end:138579) A=2766197 nt (start:2724844, end:2724823) CALCULATED DISTANCE APART: -3144173 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -621133 <- tig#r.66, A=2766197 nt (start:2129648, end:2129669) B=201913 nt (start:197329, end:197350) CALCULATED DISTANCE APART: -621133 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATAACCCGAGAGCTATATTAC - TATACATCAATATTCTTATAC) on contig 15 (3712591 nt) Astart:1718838 Aend:1718859 Bstart:1729180 Bend:1729201 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282967, end:282988) B=2196 nt (start:1148, end:1127) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAGTTGTTATACTCAATCATA - TATGATTGAGTATAACAACTT) on contig 84 (197079 nt) Astart:196818 Aend:196797 Bstart:196797 Bend:196818 CALCULATED DISTANCE APART: 21 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#16 -> -1845669 <- tig#270, B=2098954 nt (start:233441, end:233462) A=1880 nt (start:156, end:135) CALCULATED DISTANCE APART: -1845669 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260332, end:2260353) B=356404 nt (start:342892, end:342913) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTGGATGCTTTTAATATAACT - TCAGGAGGTCCCAAAGCTTCT) on contig 2 (5014909 nt) Astart:1269396 Aend:1269417 Bstart:1284058 Bend:1284037 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730272, end:730293) B=3531543 nt (start:3199846, end:3199825) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#265 -> -3126344 <- tig#4, A=1946 nt (start:1551, end:1572) B=3837743 nt (start:3145949, end:3145928) CALCULATED DISTANCE APART: -3126344 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259632, end:2259653) B=356404 nt (start:343592, end:343613) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#67 -> -23669 <- tig#134, B=197815 nt (start:180440, end:180461) A=33262 nt (start:26294, end:26273) CALCULATED DISTANCE APART: -23669 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#105 -> -40580 <- tig#79, B=70965 nt (start:45304, end:45325) A=136600 nt (start:34919, end:34898) CALCULATED DISTANCE APART: -40580 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136428, end:136449) B=15068 nt (start:1248, end:1269) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:458804, end:458783) A=1345436 nt (start:26856, end:26835) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.7 -> -3574528 <- tig#38, B=3534247 nt (start:2548641, end:2548620) A=1143067 nt (start:1045887, end:1045866) CALCULATED DISTANCE APART: -3574528 < -2000 Pairs unsatisfied in distance within a contig. Pair (GGGCTGTAAGTGATAGAGCAG - GTAGGATGAGTCCATTATCAT) on contig 41 (667251 nt) Astart:88568 Aend:88547 Bstart:75888 Bend:75909 CALCULATED DISTANCE APART: 12680 Pairs unsatisfied in pairing logic within a contig. Pair (AGAGTACGGTACTAATGAAGA - AGCCTTACCAATATATATGTC) on contig 14 (2271162 nt) Astart:658451 Aend:658430 Bstart:495460 Bend:495439 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#46 -> -3500665 <- tig#6, B=577887 nt (start:567140, end:567161) A=6870868 nt (start:3509918, end:3509897) CALCULATED DISTANCE APART: -3500665 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#118 -> -33564 <- tig#97, B=66247 nt (start:37552, end:37573) A=91050 nt (start:24869, end:24848) CALCULATED DISTANCE APART: -33564 < -2000 Pairs unsatisfied in distance within a contig. Pair (CATTGTATGGCCTACGGATTT - ATCCCATTGCGAGAGGTGTGA) on contig 27 (1227811 nt) Astart:434460 Aend:434481 Bstart:450713 Bend:450692 CALCULATED DISTANCE APART: 16253 Pairs unsatisfied in distance within a contig. Pair (TCCTTTTTACTCTTTTCCTTT - GCGCTCAAGAGGTTGTTAAGG) on contig 43 (1235946 nt) Astart:243821 Aend:243800 Bstart:226411 Bend:226432 CALCULATED DISTANCE APART: 17410 Pairs unsatisfied in distance within a contig. Pair (CTCAAATATCAAATTTTTTAT - AGCTTCAATGTTGACATTTTA) on contig 13 (2650694 nt) Astart:1947145 Aend:1947166 Bstart:1962793 Bend:1962772 CALCULATED DISTANCE APART: 15648 Pairs unsatisfied in distance within a contig. Pair (GATAATGATATGGCTCTATCT - ATGTACTATTTCAATGTTCTA) on contig 6 (6870868 nt) Astart:1138209 Aend:1138188 Bstart:1129782 Bend:1129803 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig. Pair (CTTCTTCTTGTTTGTCTTTTT - TAAATTTCATATTAATAGGTA) on contig 5 (3689108 nt) Astart:1170052 Aend:1170073 Bstart:1185187 Bend:1185166 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in pairing logic within a contig. Pair (TATTTACAAATTAATATTAGT - ATTCCGCTACGCATAAGACAA) on contig 19 (3531543 nt) Astart:3060491 Aend:3060470 Bstart:3048232 Bend:3048211 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#12 -> -167604 <- tig#557, B=2766197 nt (start:2579499, end:2579520) A=1050 nt (start:906, end:885) CALCULATED DISTANCE APART: -167604 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GTGCTTCGTTGGAAAGCATGG - TGTCAGCCCACGCATGACACG) on contig 49 (399963 nt) Astart:43549 Aend:43528 Bstart:43773 Bend:43794 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460999, end:460978) A=1345436 nt (start:24661, end:24640) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728553, end:728574) A=1096 nt (start:638, end:617) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#33 -> -492044 <- tig#32, A=1290487 nt (start:1236007, end:1236028) B=972151 nt (start:457564, end:457543) CALCULATED DISTANCE APART: -492044 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#15 -> -2861281 <- tig#43, B=3712591 nt (start:2053777, end:2053798) A=1235946 nt (start:1222467, end:1222446) CALCULATED DISTANCE APART: -2861281 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282292, end:282313) B=2196 nt (start:473, end:452) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#35 -> -1127097 <- tig#r.48, A=1135475 nt (start:222612, end:222633) B=487359 nt (start:253125, end:253146) CALCULATED DISTANCE APART: -1127097 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.291 -> -2024000 <- tig#16, B=1714 nt (start:353, end:332) A=2098954 nt (start:2043647, end:2043626) CALCULATED DISTANCE APART: -2024000 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219316, end:4219295) A=2598 nt (start:2305, end:2284) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2495, end:2516) A=258385 nt (start:1031, end:1010) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219096, end:4219075) A=2598 nt (start:2525, end:2504) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#57 -> -3231864 <- tig#7, A=258385 nt (start:256004, end:256025) B=3534247 nt (start:3249483, end:3249462) CALCULATED DISTANCE APART: -3231864 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#127 -> -57440 <- tig#17, B=80830 nt (start:63095, end:63116) A=1959065 nt (start:59705, end:59684) CALCULATED DISTANCE APART: -57440 < -2000 Pairs unsatisfied in distance within a contig. Pair (CCCAAATACGTGAAGAGCTCT - AATAGAGAGATCTTCTTAAAG) on contig 1 (4853111 nt) Astart:346015 Aend:346036 Bstart:391292 Bend:391271 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#147 -> -2122509 <- tig#6, A=21323 nt (start:6658, end:6679) B=6870868 nt (start:2127844, end:2127823) CALCULATED DISTANCE APART: -2122509 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -1168778 <- tig#384, A=5070776 nt (start:3882700, end:3882721) B=1359 nt (start:702, end:681) CALCULATED DISTANCE APART: -1168778 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16575, end:16554) A=1227811 nt (start:7240, end:7219) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.16 -> -2024002 <- tig#291, B=2098954 nt (start:2043648, end:2043627) A=1714 nt (start:354, end:333) CALCULATED DISTANCE APART: -2024002 < -2000 Pairs unsatisfied in distance within a contig. Pair (GACAAAATATTTGCCGACAAA - GAAAGAAATTGTACGAACGTC) on contig 37 (853709 nt) Astart:838789 Aend:838768 Bstart:823284 Bend:823305 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -322558 <- tig#r.572, A=2650694 nt (start:2308870, end:2308891) B=1031 nt (start:297, end:318) CALCULATED DISTANCE APART: -322558 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#34 -> -1107967 <- tig#79, A=1705564 nt (start:661706, end:661727) B=136600 nt (start:84109, end:84088) CALCULATED DISTANCE APART: -1107967 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12011, end:11990) A=91302 nt (start:12182, end:12161) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -1168778 <- tig#384, A=5070776 nt (start:3882945, end:3882966) B=1359 nt (start:947, end:926) CALCULATED DISTANCE APART: -1168778 < -2000 Pairs unsatisfied in distance within a contig. Pair (AACGGGGTTTGCGATCTCTTG - ATCAACAATGTTCCCATACCA) on contig 4 (3837743 nt) Astart:1822759 Aend:1822738 Bstart:1799684 Bend:1799705 CALCULATED DISTANCE APART: 23075 Pairs unsatisfied in pairing logic within a contig. Pair (CTAAAGTGGAACAATCTCTAG - TTGGAAATATCTGTTCAAAGA) on contig 4 (3837743 nt) Astart:2358161 Aend:2358182 Bstart:2359901 Bend:2359922 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#236 -> -178448 <- tig#84, A=2565 nt (start:936, end:957) B=197079 nt (start:196819, end:196798) CALCULATED DISTANCE APART: -178448 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#25 -> -666259 <- tig#2, B=1290536 nt (start:852817, end:852838) A=5014909 nt (start:248540, end:248519) CALCULATED DISTANCE APART: -666259 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:1720, end:1741) A=258385 nt (start:256, end:235) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728193, end:728214) A=1096 nt (start:278, end:257) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#120 -> -1341554 <- tig#29, B=44710 nt (start:43197, end:43218) A=1463708 nt (start:1360041, end:1360020) CALCULATED DISTANCE APART: -1341554 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16270, end:16249) A=1227811 nt (start:7545, end:7524) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#43 -> -1055891 <- tig#67, B=1235946 nt (start:225361, end:225382) A=197815 nt (start:65306, end:65285) CALCULATED DISTANCE APART: -1055891 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.43 -> -310234 <- tig#67, B=1235946 nt (start:265992, end:265971) A=197815 nt (start:64242, end:64221) CALCULATED DISTANCE APART: -310234 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#81 -> -129610 <- tig#74, A=258617 nt (start:251586, end:251607) B=238371 nt (start:142579, end:142558) CALCULATED DISTANCE APART: -129610 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#3 -> -3618470 <- tig#27, B=3889482 nt (start:316534, end:316555) A=1227811 nt (start:65522, end:65501) CALCULATED DISTANCE APART: -3618470 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -621133 <- tig#r.66, A=2766197 nt (start:2129343, end:2129364) B=201913 nt (start:197634, end:197655) CALCULATED DISTANCE APART: -621133 < -2000 Pairs unsatisfied in distance within a contig. Pair (TAAATTAATAAAAATATTTAT - GGAAGTTATGGCTTTAGCTGG) on contig 109 (66564 nt) Astart:5659 Aend:5638 Bstart:23 Bend:44 CALCULATED DISTANCE APART: 5636 Pairs unsatisfied in pairing logic within a contig. Pair (CATCGCAGGCAAACAAATTAA - GCCAACGAAAATAAAATTGTT) on contig 15 (3712591 nt) Astart:1792111 Aend:1792090 Bstart:2056172 Bend:2056193 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#46 -> -3144173 <- tig#12, B=577887 nt (start:139368, end:139389) A=2766197 nt (start:2725654, end:2725633) CALCULATED DISTANCE APART: -3144173 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260757, end:2260778) B=356404 nt (start:342467, end:342488) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig. Pair (GGGGTATGGAATGTATCTCTT - AAAGTGATATTTAATTATCAA) on contig 71 (271268 nt) Astart:123810 Aend:123789 Bstart:118436 Bend:118457 CALCULATED DISTANCE APART: 5374 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.35 -> -676591 <- tig#2, B=1135475 nt (start:599470, end:599449) A=5014909 nt (start:97121, end:97100) CALCULATED DISTANCE APART: -676591 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#433 -> -944078 <- tig#r.29, A=1238 nt (start:746, end:767) B=1463708 nt (start:500122, end:500143) CALCULATED DISTANCE APART: -944078 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#283 -> -3818458 <- tig#2, A=1768 nt (start:258, end:279) B=5014909 nt (start:3836948, end:3836927) CALCULATED DISTANCE APART: -3818458 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -1335763 <- tig#4, B=3747885 nt (start:2857552, end:2857573) A=3837743 nt (start:465430, end:465409) CALCULATED DISTANCE APART: -1335763 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#23 -> -1326395 <- tig#124, A=1345436 nt (start:37, end:58) B=41985 nt (start:996, end:975) CALCULATED DISTANCE APART: -1326395 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -1263676 <- tig#29, A=736718 nt (start:407321, end:407342) B=1463708 nt (start:954279, end:954258) CALCULATED DISTANCE APART: -1263676 < -2000 Pairs unsatisfied in distance within a contig. Pair (AATGACTTTGGCTTCTATAAT - TTTCAAGCAGCAGCTTACTGC) on contig 6 (6870868 nt) Astart:1138649 Aend:1138628 Bstart:1130194 Bend:1130215 CALCULATED DISTANCE APART: 8455 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#3 -> -5324663 <- tig#7, A=3889482 nt (start:1093650, end:1093671) B=3534247 nt (start:2548831, end:2548810) CALCULATED DISTANCE APART: -5324663 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -4201 <- tig#r.96, A=262460 nt (start:244256, end:244277) B=91302 nt (start:85305, end:85326) CALCULATED DISTANCE APART: -4201 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460084, end:460063) A=1345436 nt (start:25576, end:25555) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#48 -> -455298 <- tig#387, B=487359 nt (start:12168, end:12189) A=1354 nt (start:107, end:86) CALCULATED DISTANCE APART: -455298 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#48 -> -331610 <- tig#r.136, A=487359 nt (start:184008, end:184029) B=49085 nt (start:826, end:847) CALCULATED DISTANCE APART: -331610 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185899, end:4185878) A=3712591 nt (start:662, end:641) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.257 -> -2902765 <- tig#8, B=1995 nt (start:1756, end:1735) A=5070776 nt (start:2921009, end:2920988) CALCULATED DISTANCE APART: -2902765 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TATATAATATATGTTCTTTTT - CGAATCCGAAACCGGATGTGT) on contig 19 (3531543 nt) Astart:3059626 Aend:3059605 Bstart:3049097 Bend:3049076 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#48 -> -156052 <- tig#51, B=487359 nt (start:406366, end:406387) A=875428 nt (start:95059, end:95038) CALCULATED DISTANCE APART: -156052 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#85 -> -124224 <- tig#104, B=121353 nt (start:4301, end:4322) A=97911 nt (start:27172, end:27151) CALCULATED DISTANCE APART: -124224 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#10 -> -2925308 <- tig#9, B=3047199 nt (start:251209, end:251230) A=3747885 nt (start:149318, end:149297) CALCULATED DISTANCE APART: -2925308 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#54 -> -710385 <- tig#81, B=625914 nt (start:50064, end:50085) A=258617 nt (start:154535, end:154514) CALCULATED DISTANCE APART: -710385 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17020, end:16999) A=1227811 nt (start:6795, end:6774) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#16 -> -1845669 <- tig#270, B=2098954 nt (start:233431, end:233452) A=1880 nt (start:146, end:125) CALCULATED DISTANCE APART: -1845669 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AAAGTTAGATTTAATAAGATG - TATTTGCATGGGAACTCTCCC) on contig 7 (3534247 nt) Astart:2255137 Aend:2255116 Bstart:2239635 Bend:2239614 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16430, end:16409) A=1227811 nt (start:7385, end:7364) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#53 -> -24524 <- tig#2, B=354284 nt (start:340729, end:340750) A=5014909 nt (start:30969, end:30948) CALCULATED DISTANCE APART: -24524 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.125 -> -166982 <- tig#71, B=54013 nt (start:33711, end:33690) A=271268 nt (start:153271, end:153250) CALCULATED DISTANCE APART: -166982 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#120 -> -1341555 <- tig#29, B=44710 nt (start:44336, end:44357) A=1463708 nt (start:1361181, end:1361160) CALCULATED DISTANCE APART: -1341555 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATCAAGTAATCAAACTATTTA - GTTTAACACCGCAGAGGCGAA) on contig 6 (6870868 nt) Astart:1138384 Aend:1138363 Bstart:1129957 Bend:1129978 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.42 -> -1433157 <- tig#20, B=659641 nt (start:2338, end:2317) A=2328057 nt (start:1450819, end:1450798) CALCULATED DISTANCE APART: -1433157 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460524, end:460503) A=1345436 nt (start:25136, end:25115) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460344, end:460323) A=1345436 nt (start:25316, end:25295) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATTTGTTGGATGCTTTTAATA - AGGTCCCAAAGCTTCTGAACT) on contig 2 (5014909 nt) Astart:1269391 Aend:1269412 Bstart:1284053 Bend:1284032 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig. Pair (AGCTCTCCGCCGTAAATCAGT - AACCACTACTACTTCAATAGA) on contig 1 (4853111 nt) Astart:346030 Aend:346051 Bstart:391307 Bend:391286 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig. Pair (AAAAAAAAGTTCAGATCATTG - TTTTGTTTTGTAAAGAGGCGA) on contig 34 (1705564 nt) Astart:679704 Aend:679683 Bstart:664741 Bend:664762 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#42 -> -1103014 <- tig#r.43, A=659641 nt (start:547262, end:547283) B=1235946 nt (start:225311, end:225332) CALCULATED DISTANCE APART: -1103014 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12516, end:12495) A=91302 nt (start:11677, end:11656) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -1168778 <- tig#384, A=5070776 nt (start:3882690, end:3882711) B=1359 nt (start:692, end:671) CALCULATED DISTANCE APART: -1168778 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.257 -> -2902765 <- tig#8, B=1995 nt (start:1151, end:1130) A=5070776 nt (start:2921614, end:2921593) CALCULATED DISTANCE APART: -2902765 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219481, end:4219460) A=2598 nt (start:2140, end:2119) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#120 -> -1341554 <- tig#29, B=44710 nt (start:43082, end:43103) A=1463708 nt (start:1359926, end:1359905) CALCULATED DISTANCE APART: -1341554 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#120 -> -1341554 <- tig#29, B=44710 nt (start:43002, end:43023) A=1463708 nt (start:1359846, end:1359825) CALCULATED DISTANCE APART: -1341554 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#35 -> -1795710 <- tig#34, A=1135475 nt (start:345382, end:345403) B=1705564 nt (start:1025617, end:1025596) CALCULATED DISTANCE APART: -1795710 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.403 -> -2330792 <- tig#13, B=1321 nt (start:310, end:289) A=2650694 nt (start:2350482, end:2350461) CALCULATED DISTANCE APART: -2330792 < -2000 Pairs unsatisfied in distance within a contig. Pair (GTTTTTTAAAAACAGCATAAC - CCAACTTACCATCCTTGCTAT) on contig 5 (3689108 nt) Astart:1169502 Aend:1169523 Bstart:1184637 Bend:1184616 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#63 -> -459997 <- tig#51, A=274372 nt (start:183316, end:183337) B=875428 nt (start:388941, end:388920) CALCULATED DISTANCE APART: -459997 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -977653 <- tig#28, B=4628067 nt (start:305234, end:305213) A=1171658 nt (start:692419, end:692398) CALCULATED DISTANCE APART: -977653 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -322558 <- tig#r.572, A=2650694 nt (start:2308640, end:2308661) B=1031 nt (start:527, end:548) CALCULATED DISTANCE APART: -322558 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2130, end:2151) A=258385 nt (start:666, end:645) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATTTTGGGGTATGGAATGTAT - GATATTTAATTATCAAGGGAC) on contig 71 (271268 nt) Astart:123815 Aend:123794 Bstart:118441 Bend:118462 CALCULATED DISTANCE APART: 5374 Pairs unsatisfied in pairing logic within a contig. Pair (AAAAAGAAACAGCTGTCTCTG - ATAGCCATGATTCTCCAAGGA) on contig 15 (3712591 nt) Astart:1717978 Aend:1717999 Bstart:1730040 Bend:1730061 Pairs unsatisfied in pairing logic within a contig. Pair (CCGCCAAAATCACCACCGTAA - GTGAGTTCTTAGCTTATTCCA) on contig 19 (3531543 nt) Astart:3059098 Aend:3059077 Bstart:3049622 Bend:3049601 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#70 -> -233239 <- tig#41, B=236880 nt (start:73124, end:73145) A=667251 nt (start:89483, end:89462) CALCULATED DISTANCE APART: -233239 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#57 -> -3231864 <- tig#7, A=258385 nt (start:255979, end:256000) B=3534247 nt (start:3249458, end:3249437) CALCULATED DISTANCE APART: -3231864 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.4 -> -1331685 <- tig#8, B=3837743 nt (start:442248, end:442227) A=5070776 nt (start:909437, end:909416) CALCULATED DISTANCE APART: -1331685 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#48 -> -3151847 <- tig#12, B=487359 nt (start:40671, end:40692) A=2766197 nt (start:2725159, end:2725138) CALCULATED DISTANCE APART: -3151847 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#119 -> -7707 <- tig#r.49, A=46878 nt (start:32055, end:32076) B=399963 nt (start:387079, end:387100) CALCULATED DISTANCE APART: -7707 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#53 -> -314812 <- tig#75, B=354284 nt (start:24604, end:24625) A=373953 nt (start:5132, end:5111) CALCULATED DISTANCE APART: -314812 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#39 -> -500712 <- tig#r.30, A=736718 nt (start:679501, end:679522) B=1050452 nt (start:586957, end:586978) CALCULATED DISTANCE APART: -500712 < -2000 Pairs unsatisfied in distance within a contig. Pair (ACCGGACTTGGTCACTTGACC - AACTTCTTCGGTGTTTAAGGA) on contig 5 (3689108 nt) Astart:1171762 Aend:1171783 Bstart:1186898 Bend:1186877 CALCULATED DISTANCE APART: 15136 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136328, end:136349) B=15068 nt (start:1348, end:1369) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:134828, end:134849) B=15068 nt (start:2848, end:2869) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig. Pair (CAATTTACGTATCAATTGCTT - CTACTTATGGCCTAAAGAGTT) on contig 30 (1050452 nt) Astart:650399 Aend:650420 Bstart:666165 Bend:666144 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#63 -> -436617 <- tig#r.75, A=274372 nt (start:183181, end:183202) B=373953 nt (start:8527, end:8548) CALCULATED DISTANCE APART: -436617 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATATAATTTTGAGAAGATGTG - ATTATGGCGGAATGAGTTTGG) on contig 71 (271268 nt) Astart:124124 Aend:124103 Bstart:118756 Bend:118777 CALCULATED DISTANCE APART: 5368 Pairs unsatisfied in pairing logic within a contig. Pair (GTGATTCGCCACGGTTTCCAA - ATACGCCAAAGTAAATACTAA) on contig 15 (3712591 nt) Astart:1718513 Aend:1718534 Bstart:1729505 Bend:1729526 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -1168778 <- tig#384, A=5070776 nt (start:3882465, end:3882486) B=1359 nt (start:467, end:446) CALCULATED DISTANCE APART: -1168778 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728758, end:728779) A=1096 nt (start:843, end:822) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGTTACCAAAAAACTCAAGGG - TATCGGACAAAACCGAAGAAG) on contig 2 (5014909 nt) Astart:1269071 Aend:1269092 Bstart:1283733 Bend:1283712 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in pairing logic within a contig. Pair (TGATTTGCTGAGGTGTAGCGA - AAACTTGCAAGTTACAACAAA) on contig 15 (3712591 nt) Astart:1718608 Aend:1718629 Bstart:1729410 Bend:1729431 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260572, end:2260593) B=356404 nt (start:342652, end:342673) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig. Pair (CGACCCTAAAACGAAGATAAG - ATAATCACTATCGTAAACCCA) on contig 1 (4853111 nt) Astart:345841 Aend:345862 Bstart:391107 Bend:391086 CALCULATED DISTANCE APART: 45266 Pairs unsatisfied in pairing logic within a contig. Pair (GACGCTTCAGCAACAGCCACC - CCACACTTGTTTTTAAGGCTC) on contig 19 (3531543 nt) Astart:3060186 Aend:3060165 Bstart:3048537 Bend:3048516 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -40662 <- tig#443, A=736718 nt (start:676726, end:676747) B=1213 nt (start:670, end:649) CALCULATED DISTANCE APART: -40662 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#85 -> -91405 <- tig#r.123, A=121353 nt (start:50751, end:50772) B=42452 nt (start:1649, end:1670) CALCULATED DISTANCE APART: -91405 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#80 -> -36969 <- tig#143, A=191116 nt (start:148699, end:148720) B=24293 nt (start:14552, end:14531) CALCULATED DISTANCE APART: -36969 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TCCGATGATCGCTCCACCATC - GCAGACCAGAGAATTTAAGGC) on contig 15 (3712591 nt) Astart:1792306 Aend:1792285 Bstart:2056362 Bend:2056383 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#38 -> -1189147 <- tig#54, B=1143067 nt (start:41832, end:41853) A=625914 nt (start:107912, end:107891) CALCULATED DISTANCE APART: -1189147 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATAAAGTAAGATGATATGATG - AAAATCACTATCTCTGCAATA) on contig 34 (1705564 nt) Astart:679304 Aend:679283 Bstart:664341 Bend:664362 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#14 -> -765444 <- tig#43, B=2271162 nt (start:2082810, end:2082831) A=1235946 nt (start:597092, end:597071) CALCULATED DISTANCE APART: -765444 < -2000 Pairs unsatisfied in distance within a contig. Pair (GCATGTGAAGCAAAAAATCAA - TACCTTGGACTGCATATTCGT) on contig 2 (5014909 nt) Astart:1270116 Aend:1270137 Bstart:1284778 Bend:1284757 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459929, end:459908) A=1345436 nt (start:25731, end:25710) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#11 -> -4378296 <- tig#136, A=4628067 nt (start:266802, end:266823) B=49085 nt (start:37031, end:37010) CALCULATED DISTANCE APART: -4378296 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730562, end:730583) B=3531543 nt (start:3200136, end:3200115) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#77 -> -122338 <- tig#99, B=160344 nt (start:25194, end:25215) A=88102 nt (start:7188, end:7167) CALCULATED DISTANCE APART: -122338 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.7 -> -2884259 <- tig#11, B=3534247 nt (start:284921, end:284900) A=4628067 nt (start:2619338, end:2619317) CALCULATED DISTANCE APART: -2884259 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#174 -> -7245 <- tig#65, B=11297 nt (start:10678, end:10699) A=286124 nt (start:26626, end:26605) CALCULATED DISTANCE APART: -7245 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:11971, end:11950) A=91302 nt (start:12222, end:12201) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGGTTTTTAGTTTGTAACACT - TTTAATGAAAGCAAACAATGT) on contig 6 (6870868 nt) Astart:1139144 Aend:1139123 Bstart:1130661 Bend:1130682 CALCULATED DISTANCE APART: 8483 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#95 -> -17263 <- tig#54, A=92653 nt (start:92097, end:92118) B=625914 nt (start:36707, end:36686) CALCULATED DISTANCE APART: -17263 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -1168778 <- tig#384, A=5070776 nt (start:3883065, end:3883086) B=1359 nt (start:1067, end:1046) CALCULATED DISTANCE APART: -1168778 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16730, end:16709) A=1227811 nt (start:7085, end:7064) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#590 -> -1631326 <- tig#r.34, A=1018 nt (start:607, end:628) B=1705564 nt (start:54649, end:54670) CALCULATED DISTANCE APART: -1631326 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CGTGTGGTTCATAGAGCTGAT - ATTTTGTGTTGATCTCCGTTG) on contig 15 (3712591 nt) Astart:1716913 Aend:1716934 Bstart:1731105 Bend:1731126 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:458684, end:458663) A=1345436 nt (start:26976, end:26955) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig. Pair (TACTTACGACGATTTTGCATT - ATAGACTCTATTCTTGTCTCT) on contig 25 (1290536 nt) Astart:990134 Aend:990113 Bstart:975600 Bend:975621 CALCULATED DISTANCE APART: 14534 Pairs unsatisfied in pairing logic within a contig. Pair (TTTCTTGTTAAATAGACATTC - TCTTTAAACATTTATGAAAGA) on contig 19 (3531543 nt) Astart:3058183 Aend:3058162 Bstart:3050537 Bend:3050516 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#40 -> -716760 <- tig#16, B=668174 nt (start:659399, end:659420) A=2098954 nt (start:727985, end:727964) CALCULATED DISTANCE APART: -716760 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTTTGGCTAGTTTGAATTGCT - TTCCCTAAAGTCTCTCTTAAG) on contig 2 (5014909 nt) Astart:1268511 Aend:1268532 Bstart:1283173 Bend:1283152 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#7 -> -577834 <- tig#30, B=3534247 nt (start:3524502, end:3524523) A=1050452 nt (start:588089, end:588068) CALCULATED DISTANCE APART: -577834 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#48 -> -127298 <- tig#r.65, A=487359 nt (start:470370, end:470391) B=286124 nt (start:155815, end:155836) CALCULATED DISTANCE APART: -127298 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.1 -> -4590186 <- tig#16, B=4853111 nt (start:3207942, end:3207921) A=2098954 nt (start:1402244, end:1402223) CALCULATED DISTANCE APART: -4590186 < -2000 Pairs unsatisfied in distance within a contig. Pair (AACAAAGTAACAAACTAAATA - ACCGTGTGACCTGAACATTGC) on contig 60 (232804 nt) Astart:31262 Aend:31283 Bstart:57540 Bend:57519 CALCULATED DISTANCE APART: 26278 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#120 -> -1341554 <- tig#29, B=44710 nt (start:43402, end:43423) A=1463708 nt (start:1360246, end:1360225) CALCULATED DISTANCE APART: -1341554 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#112 -> -20788 <- tig#r.126, A=54810 nt (start:44873, end:44894) B=40796 nt (start:9945, end:9966) CALCULATED DISTANCE APART: -20788 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259782, end:2259803) B=356404 nt (start:343442, end:343463) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#92 -> -2121765 <- tig#16, A=101136 nt (start:2943, end:2964) B=2098954 nt (start:2043572, end:2043551) CALCULATED DISTANCE APART: -2121765 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.12 -> -5332373 <- tig#1, B=2766197 nt (start:1596590, end:1596569) A=4853111 nt (start:3755783, end:3755762) CALCULATED DISTANCE APART: -5332373 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.38 -> -1310006 <- tig#33, B=1143067 nt (start:1039189, end:1039168) A=1290487 nt (start:290817, end:290796) CALCULATED DISTANCE APART: -1310006 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2170, end:2191) A=258385 nt (start:706, end:685) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#2 -> -4867530 <- tig#r.7, A=5014909 nt (start:136104, end:136125) B=3534247 nt (start:3525522, end:3525543) CALCULATED DISTANCE APART: -4867530 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#433 -> -944078 <- tig#r.29, A=1238 nt (start:656, end:677) B=1463708 nt (start:500212, end:500233) CALCULATED DISTANCE APART: -944078 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#86 -> -735496 <- tig#17, B=280231 nt (start:15134, end:15155) A=1959065 nt (start:490399, end:490378) CALCULATED DISTANCE APART: -735496 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCACAACTCAACTAATCACCA - ACACAAAACTTTGCGCTGTTG) on contig 2 (5014909 nt) Astart:1268801 Aend:1268822 Bstart:1283463 Bend:1283442 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#49 -> -1152645 <- tig#r.43, A=399963 nt (start:352046, end:352067) B=1235946 nt (start:111218, end:111239) CALCULATED DISTANCE APART: -1152645 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#1 -> -6674828 <- tig#6, B=4853111 nt (start:2924872, end:2924893) A=6870868 nt (start:4766589, end:4766568) CALCULATED DISTANCE APART: -6674828 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTATTGACTATTAAGTGTAAT - ACAAATATCTTATACCAAAAT) on contig 15 (3712591 nt) Astart:1719008 Aend:1719029 Bstart:1729010 Bend:1729031 Pairs unsatisfied in distance within a contig. Pair (GTAGCCAGCTAATAGATTTGT - CATTATCTGATAAACTGATAC) on contig 27 (1227811 nt) Astart:434665 Aend:434686 Bstart:450918 Bend:450897 CALCULATED DISTANCE APART: 16253 Pairs unsatisfied in distance within a contig. Pair (TTTTAGTCACTGAACTTTGTT - AAATTGAACAGTGAATGTAAG) on contig 2 (5014909 nt) Astart:1268721 Aend:1268742 Bstart:1283383 Bend:1283362 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#265 -> -3126344 <- tig#4, A=1946 nt (start:1696, end:1717) B=3837743 nt (start:3146094, end:3146073) CALCULATED DISTANCE APART: -3126344 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -214292 <- tig#6, A=354284 nt (start:133895, end:133916) B=6870868 nt (start:13903, end:13882) CALCULATED DISTANCE APART: -214292 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730592, end:730613) B=3531543 nt (start:3200166, end:3200145) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTTTCAAAGTTAGATATCAGC - CACAATTATAATAAAAAAAAA) on contig 19 (3531543 nt) Astart:3060471 Aend:3060450 Bstart:3048252 Bend:3048231 Pairs unsatisfied in distance within a contig. Pair (CACGACTATGACTTTTTTGAT - TCGATTTATAACGATTTATAA) on contig 71 (271268 nt) Astart:124184 Aend:124163 Bstart:118816 Bend:118837 CALCULATED DISTANCE APART: 5368 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.46 -> -213344 <- tig#51, B=577887 nt (start:160148, end:160127) A=875428 nt (start:73196, end:73175) CALCULATED DISTANCE APART: -213344 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219061, end:4219040) A=2598 nt (start:2560, end:2539) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig. Pair (AATCTCTAGATCTTGTTTTAG - CATATACTAATTTACATGTAT) on contig 37 (853709 nt) Astart:538347 Aend:538368 Bstart:551016 Bend:550995 CALCULATED DISTANCE APART: 12669 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#53 -> -24524 <- tig#2, B=354284 nt (start:340634, end:340655) A=5014909 nt (start:30874, end:30853) CALCULATED DISTANCE APART: -24524 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.42 -> -1433157 <- tig#20, B=659641 nt (start:2333, end:2312) A=2328057 nt (start:1450824, end:1450803) CALCULATED DISTANCE APART: -1433157 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282612, end:282633) B=2196 nt (start:793, end:772) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGATCCTCAATGTCAAAGCCG - AGTTTTAAAATTTGAGCTTTA) on contig 53 (354284 nt) Astart:242999 Aend:242978 Bstart:340259 Bend:340280 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#19 -> -3098757 <- tig#47, A=3531543 nt (start:470016, end:470037) B=471458 nt (start:57230, end:57209) CALCULATED DISTANCE APART: -3098757 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459614, end:459593) A=1345436 nt (start:26046, end:26025) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig. Pair (CGACACTAACACATATACCCT - AGAGATGAATGAAACAAGCAC) on contig 37 (853709 nt) Astart:838554 Aend:838533 Bstart:823049 Bend:823070 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#8 -> -5099947 <- tig#13, B=5070776 nt (start:760768, end:760789) A=2650694 nt (start:809939, end:809918) CALCULATED DISTANCE APART: -5099947 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.502 -> -21029 <- tig#136, B=1118 nt (start:558, end:537) A=49085 nt (start:40471, end:40450) CALCULATED DISTANCE APART: -21029 < -2000 Pairs unsatisfied in distance within a contig. Pair (GAATTGGACTAATAATACCAA - AGATGAGAACTTTTTTTGTTT) on contig 34 (1705564 nt) Astart:679664 Aend:679643 Bstart:664701 Bend:664722 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#19 -> -3044634 <- tig#r.72, A=3531543 nt (start:470551, end:470572) B=172011 nt (start:168369, end:168390) CALCULATED DISTANCE APART: -3044634 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#112 -> -860343 <- tig#r.51, A=54810 nt (start:44673, end:44694) B=875428 nt (start:5222, end:5243) CALCULATED DISTANCE APART: -860343 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.47 -> -199675 <- tig#2, B=471458 nt (start:122244, end:122223) A=5014909 nt (start:97431, end:97410) CALCULATED DISTANCE APART: -199675 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#119 -> -7707 <- tig#r.49, A=46878 nt (start:32015, end:32036) B=399963 nt (start:387119, end:387140) CALCULATED DISTANCE APART: -7707 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTAATCTCAAATGCACACACA - ATCATTCAAACAATAGCTACA) on contig 6 (6870868 nt) Astart:1138139 Aend:1138118 Bstart:1129712 Bend:1129733 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185874, end:4185853) A=3712591 nt (start:687, end:666) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:458819, end:458798) A=1345436 nt (start:26841, end:26820) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33939, end:33918) A=855454 nt (start:18510, end:18489) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTGTTGTATATGTTGCTAATG - TCATAAACAATGTCTTTGACA) on contig 2 (5014909 nt) Astart:1269556 Aend:1269577 Bstart:1284218 Bend:1284197 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282892, end:282913) B=2196 nt (start:1073, end:1052) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#7 -> -3853079 <- tig#36, A=3534247 nt (start:146164, end:146185) B=855454 nt (start:484996, end:484975) CALCULATED DISTANCE APART: -3853079 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GATCCGGTTGCTGTTTAAGTT - ATCTTAAAGGCGTAAGAATTG) on contig 34 (1705564 nt) Astart:1687126 Aend:1687147 Bstart:1679274 Bend:1679295 Pairs unsatisfied in pairing logic within a contig. Pair (AATAACATAGGATATAGAAAG - TAAAACGTTTACATTGTCTAA) on contig 21 (1811326 nt) Astart:154705 Aend:154684 Bstart:261435 Bend:261414 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.35 -> -676591 <- tig#2, B=1135475 nt (start:599465, end:599444) A=5014909 nt (start:97126, end:97105) CALCULATED DISTANCE APART: -676591 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460659, end:460638) A=1345436 nt (start:25001, end:24980) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTATTTTTTTTTTTTTACGTC - CAGCAAAAATTATTATAACTA) on contig 13 (2650694 nt) Astart:1947215 Aend:1947236 Bstart:1962863 Bend:1962842 CALCULATED DISTANCE APART: 15648 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12796, end:12775) A=91302 nt (start:11397, end:11376) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#433 -> -944078 <- tig#r.29, A=1238 nt (start:651, end:672) B=1463708 nt (start:500217, end:500238) CALCULATED DISTANCE APART: -944078 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGCATTTTCTTTATAATTGAG - TCATCCAGGTGCCAGATAACA) on contig 6 (6870868 nt) Astart:1138279 Aend:1138258 Bstart:1129852 Bend:1129873 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig. Pair (ATATAAAAAAAAAGTTCAGAT - TTTTGTAAAGAGGCGAGTCAA) on contig 34 (1705564 nt) Astart:679709 Aend:679688 Bstart:664746 Bend:664767 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in pairing logic within a contig. Pair (GGTGGCGGAGGAGCCAACGTC - ACGTTCTCGTTTATTATTCGA) on contig 15 (3712591 nt) Astart:1718543 Aend:1718564 Bstart:1729475 Bend:1729496 Pairs unsatisfied in pairing logic within a contig. Pair (CACTATGAACAGAATGGCCAC - TTCACATATAATTTATTCACG) on contig 19 (3531543 nt) Astart:3058973 Aend:3058952 Bstart:3049747 Bend:3049726 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.257 -> -2902765 <- tig#8, B=1995 nt (start:1476, end:1455) A=5070776 nt (start:2921289, end:2921268) CALCULATED DISTANCE APART: -2902765 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#127 -> -57440 <- tig#17, B=80830 nt (start:63265, end:63286) A=1959065 nt (start:59875, end:59854) CALCULATED DISTANCE APART: -57440 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728508, end:728529) A=1096 nt (start:593, end:572) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#4 -> -2642600 <- tig#32, B=3837743 nt (start:1719926, end:1719947) A=972151 nt (start:544783, end:544762) CALCULATED DISTANCE APART: -2642600 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#265 -> -3126344 <- tig#4, A=1946 nt (start:1851, end:1872) B=3837743 nt (start:3146249, end:3146228) CALCULATED DISTANCE APART: -3126344 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCTTGAATACCTCGAGGATAT - GATCTAAAATCATTTACTATA) on contig 2 (5014909 nt) Astart:1269271 Aend:1269292 Bstart:1283933 Bend:1283912 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728853, end:728874) A=1096 nt (start:938, end:917) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -4201 <- tig#r.96, A=262460 nt (start:244496, end:244517) B=91302 nt (start:85065, end:85086) CALCULATED DISTANCE APART: -4201 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#19 -> -2734537 <- tig#r.2, A=3531543 nt (start:1923348, end:1923369) B=5014909 nt (start:3868567, end:3868588) CALCULATED DISTANCE APART: -2734537 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#2 -> -4941109 <- tig#r.85, A=5014909 nt (start:170522, end:170543) B=121353 nt (start:4631, end:4652) CALCULATED DISTANCE APART: -4941109 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4186274, end:4186253) A=3712591 nt (start:287, end:266) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.12 -> -2638115 <- tig#86, B=2766197 nt (start:2448747, end:2448726) A=280231 nt (start:209368, end:209347) CALCULATED DISTANCE APART: -2638115 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#75 -> -1731898 <- tig#19, A=373953 nt (start:296326, end:296347) B=3531543 nt (start:1674271, end:1674250) CALCULATED DISTANCE APART: -1731898 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATGAGTTATAAGATCAAAATA - AACAAGTACATAGAATTAAAA) on contig 37 (853709 nt) Astart:838679 Aend:838658 Bstart:823174 Bend:823195 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in distance within a contig. Pair (CTTTGGAACCCACCGAGTACT - AAGTTTATTATTTAATTTATT) on contig 34 (1705564 nt) Astart:680019 Aend:679998 Bstart:665056 Bend:665077 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#46 -> -534245 <- tig#r.125, A=577887 nt (start:27759, end:27780) B=54013 nt (start:49896, end:49917) CALCULATED DISTANCE APART: -534245 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730277, end:730298) B=3531543 nt (start:3199851, end:3199830) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig. Pair (CTATTAGGAGACACAGACACA - CAAGGAATCTGAAAAGACTAG) on contig 15 (3712591 nt) Astart:3350045 Aend:3350066 Bstart:3375033 Bend:3375012 CALCULATED DISTANCE APART: 24988 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#19 -> -1649636 <- tig#31, A=3531543 nt (start:1878727, end:1878748) B=976128 nt (start:16820, end:16799) CALCULATED DISTANCE APART: -1649636 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259707, end:2259728) B=356404 nt (start:343517, end:343538) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#92 -> -2121327 <- tig#16, A=101136 nt (start:3343, end:3364) B=2098954 nt (start:2043534, end:2043513) CALCULATED DISTANCE APART: -2121327 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135578, end:135599) B=15068 nt (start:2098, end:2119) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#12 -> -245465 <- tig#56, B=2766197 nt (start:2696531, end:2696552) A=262460 nt (start:195799, end:195778) CALCULATED DISTANCE APART: -245465 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.27 -> -1227462 <- tig#3, B=1227811 nt (start:1227550, end:1227529) A=3889482 nt (start:19912, end:19891) CALCULATED DISTANCE APART: -1227462 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460239, end:460218) A=1345436 nt (start:25421, end:25400) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#81 -> -140925 <- tig#74, A=258617 nt (start:240749, end:240770) B=238371 nt (start:143057, end:143036) CALCULATED DISTANCE APART: -140925 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728753, end:728774) A=1096 nt (start:838, end:817) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:1815, end:1836) A=258385 nt (start:351, end:330) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.7 -> -2888145 <- tig#40, B=3534247 nt (start:2548991, end:2548970) A=668174 nt (start:359154, end:359133) CALCULATED DISTANCE APART: -2888145 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#92 -> -6676 <- tig#r.139, A=101136 nt (start:101102, end:101123) B=27696 nt (start:1054, end:1075) CALCULATED DISTANCE APART: -6676 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.93 -> -754845 <- tig#13, B=152036 nt (start:144489, end:144468) A=2650694 nt (start:630356, end:630335) CALCULATED DISTANCE APART: -754845 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.91 -> -51057 <- tig#31, B=101959 nt (start:15585, end:15564) A=976128 nt (start:55472, end:55451) CALCULATED DISTANCE APART: -51057 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:729927, end:729948) B=3531543 nt (start:3199501, end:3199480) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig. Pair (AACCTTGGAAGATTTGTTGGA - GCTAATAAAGGGAAGCGTGAA) on contig 30 (1050452 nt) Astart:649209 Aend:649230 Bstart:664975 Bend:664954 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#118 -> -33564 <- tig#97, B=66247 nt (start:38292, end:38313) A=91050 nt (start:25609, end:25588) CALCULATED DISTANCE APART: -33564 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAGGTCTATTGACGATGGAGA - GCTTTCTTAAAAGCGGTTGAT) on contig 1 (4853111 nt) Astart:346765 Aend:346786 Bstart:392042 Bend:392021 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig. Pair (TGGAAAGCGTTGTCTGTTGGT - AAATGCATCCCTGCAGGAACC) on contig 37 (853709 nt) Astart:839189 Aend:839168 Bstart:823684 Bend:823705 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in pairing logic within a contig. Pair (ACTTCAAGCAACCAGAAAAGA - TACCCGGAGGCACACAGTTGC) on contig 15 (3712591 nt) Astart:1718368 Aend:1718389 Bstart:1729650 Bend:1729671 Pairs unsatisfied in distance within a contig. Pair (GCTTTTACAAAATGACTTTGG - CAGCTTACTGCATTCCTCGAG) on contig 6 (6870868 nt) Astart:1138659 Aend:1138638 Bstart:1130204 Bend:1130225 CALCULATED DISTANCE APART: 8455 Pairs unsatisfied in distance within a contig. Pair (AAATTTTTTATAACTAAACTA - ATATATGATAAGCTTCAATGT) on contig 13 (2650694 nt) Astart:1947155 Aend:1947176 Bstart:1962803 Bend:1962782 CALCULATED DISTANCE APART: 15648 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259217, end:2259238) B=356404 nt (start:344007, end:344028) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAAACTGTCTTAAAATGTCTT - AACTTTTAGAGCAAGCATCCT) on contig 37 (853709 nt) Astart:538487 Aend:538508 Bstart:551160 Bend:551139 CALCULATED DISTANCE APART: 12673 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#26 -> -90650 <- tig#95, B=1332708 nt (start:1310668, end:1310689) A=92653 nt (start:88610, end:88589) CALCULATED DISTANCE APART: -90650 < -2000 Pairs unsatisfied in distance within a contig. Pair (AACTAAGGTACAGAGCATTTA - AGATAGAGTGCTTCAGAAAAA) on contig 27 (1227811 nt) Astart:434575 Aend:434596 Bstart:450828 Bend:450807 CALCULATED DISTANCE APART: 16253 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.46 -> -15242 <- tig#3, B=577887 nt (start:15665, end:15644) A=3889482 nt (start:19577, end:19556) CALCULATED DISTANCE APART: -15242 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#39 -> -500712 <- tig#r.30, A=736718 nt (start:679531, end:679552) B=1050452 nt (start:586927, end:586948) CALCULATED DISTANCE APART: -500712 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.1 -> -4590186 <- tig#16, B=4853111 nt (start:3207762, end:3207741) A=2098954 nt (start:1402424, end:1402403) CALCULATED DISTANCE APART: -4590186 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#54 -> -318711 <- tig#r.39, A=625914 nt (start:324362, end:324383) B=736718 nt (start:699559, end:699580) CALCULATED DISTANCE APART: -318711 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -40662 <- tig#443, A=736718 nt (start:677041, end:677062) B=1213 nt (start:985, end:964) CALCULATED DISTANCE APART: -40662 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459949, end:459928) A=1345436 nt (start:25711, end:25690) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#13 -> -3265533 <- tig#5, B=2650694 nt (start:2066839, end:2066860) A=3689108 nt (start:2701678, end:2701657) CALCULATED DISTANCE APART: -3265533 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#101 -> -2656718 <- tig#12, A=84691 nt (start:11245, end:11266) B=2766197 nt (start:2603272, end:2603251) CALCULATED DISTANCE APART: -2656718 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.28 -> -4041595 <- tig#8, B=1171658 nt (start:689966, end:689945) A=5070776 nt (start:3371629, end:3371608) CALCULATED DISTANCE APART: -4041595 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#86 -> -1157724 <- tig#r.5, A=280231 nt (start:170150, end:170171) B=3689108 nt (start:2621465, end:2621486) CALCULATED DISTANCE APART: -1157724 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#33 -> -492044 <- tig#32, A=1290487 nt (start:1235747, end:1235768) B=972151 nt (start:457304, end:457283) CALCULATED DISTANCE APART: -492044 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728373, end:728394) A=1096 nt (start:458, end:437) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCATACGACTAAAAATAAAAT - AAATGGTTAACAATGATTATA) on contig 60 (232804 nt) Astart:31297 Aend:31318 Bstart:57575 Bend:57554 CALCULATED DISTANCE APART: 26278 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#46 -> -523088 <- tig#r.48, A=577887 nt (start:136041, end:136062) B=487359 nt (start:386117, end:386138) CALCULATED DISTANCE APART: -523088 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082497, end:2082518) B=976128 nt (start:961025, end:961046) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -253389 <- tig#43, A=736718 nt (start:483683, end:483704) B=1235946 nt (start:20354, end:20333) CALCULATED DISTANCE APART: -253389 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#12 -> -245484 <- tig#56, B=2766197 nt (start:2696535, end:2696556) A=262460 nt (start:195822, end:195801) CALCULATED DISTANCE APART: -245484 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#79 -> -614150 <- tig#r.2, A=136600 nt (start:76482, end:76503) B=5014909 nt (start:4440877, end:4440898) CALCULATED DISTANCE APART: -614150 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730322, end:730343) B=3531543 nt (start:3199896, end:3199875) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10638, end:10617) A=2766197 nt (start:2150925, end:2150904) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.22 -> -475626 <- tig#55, B=1636463 nt (start:338828, end:338807) A=265143 nt (start:156798, end:156777) CALCULATED DISTANCE APART: -475626 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10358, end:10337) A=2766197 nt (start:2151205, end:2151184) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3583 <- tig#26, B=1171658 nt (start:1171533, end:1171554) A=1332708 nt (start:23458, end:23437) CALCULATED DISTANCE APART: -3583 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#43 -> -1009131 <- tig#73, B=1235946 nt (start:225481, end:225502) A=171056 nt (start:18666, end:18645) CALCULATED DISTANCE APART: -1009131 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTCTATCCGGTCACACGGCAA - AACCATCTCAAAACAGCATAA) on contig 4 (3837743 nt) Astart:2358221 Aend:2358242 Bstart:2359841 Bend:2359862 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#33 -> -492044 <- tig#32, A=1290487 nt (start:1236022, end:1236043) B=972151 nt (start:457579, end:457558) CALCULATED DISTANCE APART: -492044 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.29 -> -1051406 <- tig#12, B=1463708 nt (start:953554, end:953533) A=2766197 nt (start:117852, end:117831) CALCULATED DISTANCE APART: -1051406 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17290, end:17269) A=1227811 nt (start:6525, end:6504) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATGATGCGAGGAGAGTGATGC - AAAACAAATTCAAAACAAGAA) on contig 15 (3712591 nt) Astart:1718628 Aend:1718649 Bstart:1729390 Bend:1729411 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459619, end:459598) A=1345436 nt (start:26041, end:26020) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGCTTTCGCTGCTGCGAAAGA - ATCGACATTTTTGTCAACCCA) on contig 1 (4853111 nt) Astart:346805 Aend:346826 Bstart:392082 Bend:392061 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in pairing logic within a contig. Pair (TGCATATTTTTCCTGATTTTA - TTTTCCTGCAAGAATATTGTT) on contig 15 (3712591 nt) Astart:1718143 Aend:1718164 Bstart:1729875 Bend:1729896 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#33 -> -492044 <- tig#32, A=1290487 nt (start:1236062, end:1236083) B=972151 nt (start:457619, end:457598) CALCULATED DISTANCE APART: -492044 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#305 -> -2202335 <- tig#r.19, A=1638 nt (start:207, end:228) B=3531543 nt (start:1310639, end:1310660) CALCULATED DISTANCE APART: -2202335 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GGATTCATATTGTTAATCTAC - TACCCAGAGATATGGGCTCTT) on contig 14 (2271162 nt) Astart:1853299 Aend:1853278 Bstart:2002519 Bend:2002498 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185549, end:4185528) A=3712591 nt (start:1012, end:991) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GAAAGACAAATCGAAAAAGAA - TTAGGAACATGATTTGGGTGT) on contig 14 (2271162 nt) Astart:658376 Aend:658355 Bstart:495535 Bend:495514 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260912, end:2260933) B=356404 nt (start:342312, end:342333) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136438, end:136459) B=15068 nt (start:1238, end:1259) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -1263639 <- tig#29, A=736718 nt (start:407528, end:407549) B=1463708 nt (start:954449, end:954428) CALCULATED DISTANCE APART: -1263639 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CGGTTCTTCTTCGTCTCGGTC - TGATCTGCGAAAAAATGGAAA) on contig 15 (3712591 nt) Astart:1717008 Aend:1717029 Bstart:1731010 Bend:1731031 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135033, end:135054) B=15068 nt (start:2643, end:2664) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#5 -> -3215286 <- tig#31, B=3689108 nt (start:603101, end:603122) A=976128 nt (start:149279, end:149258) CALCULATED DISTANCE APART: -3215286 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGATCCATAAGTCAAGAAGTC - CTCTTCAATAATTTTCACCAG) on contig 19 (3531543 nt) Astart:3059451 Aend:3059430 Bstart:3049272 Bend:3049251 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#31 -> -921133 <- tig#r.134, A=976128 nt (start:42144, end:42165) B=33262 nt (start:26113, end:26134) CALCULATED DISTANCE APART: -921133 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#21 -> -1681105 <- tig#43, A=1811326 nt (start:375958, end:375979) B=1235946 nt (start:265737, end:265716) CALCULATED DISTANCE APART: -1681105 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#43 -> -1009131 <- tig#73, B=1235946 nt (start:225491, end:225512) A=171056 nt (start:18676, end:18655) CALCULATED DISTANCE APART: -1009131 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.28 -> -3728203 <- tig#15, B=1171658 nt (start:280956, end:280935) A=3712591 nt (start:3467247, end:3467226) CALCULATED DISTANCE APART: -3728203 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730847, end:730868) B=3531543 nt (start:3200421, end:3200400) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12571, end:12550) A=91302 nt (start:11622, end:11601) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGTAACAATACACTTCAATAA - TTTTATAAAGTACTATGAAAT) on contig 34 (1705564 nt) Astart:679994 Aend:679973 Bstart:665031 Bend:665052 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#19 -> -5298512 <- tig#r.11, A=3531543 nt (start:2694053, end:2694074) B=4628067 nt (start:147045, end:147066) CALCULATED DISTANCE APART: -5298512 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2510, end:2531) A=258385 nt (start:1046, end:1025) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATCGTGTCACTGAAAGATAGA - CTTTCCTGAGAATATCTGAAA) on contig 34 (1705564 nt) Astart:679579 Aend:679558 Bstart:664616 Bend:664637 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -621133 <- tig#r.66, A=2766197 nt (start:2129533, end:2129554) B=201913 nt (start:197444, end:197465) CALCULATED DISTANCE APART: -621133 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2195, end:2216) A=258385 nt (start:731, end:710) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCGCGGAATTTTATTTCCTGT - GCAACAGATGCATACTTGATT) on contig 46 (577887 nt) Astart:183335 Aend:183356 Bstart:200785 Bend:200764 CALCULATED DISTANCE APART: 17450 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -40662 <- tig#443, A=736718 nt (start:677016, end:677037) B=1213 nt (start:960, end:939) CALCULATED DISTANCE APART: -40662 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -322558 <- tig#r.572, A=2650694 nt (start:2308960, end:2308981) B=1031 nt (start:207, end:228) CALCULATED DISTANCE APART: -322558 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGGTGATGGAGACTTTGTATT - AATTTGTAAAGATTGACGTGC) on contig 19 (3531543 nt) Astart:3059946 Aend:3059925 Bstart:3048777 Bend:3048756 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#46 -> -3144173 <- tig#12, B=577887 nt (start:138518, end:138539) A=2766197 nt (start:2724804, end:2724783) CALCULATED DISTANCE APART: -3144173 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#305 -> -2202335 <- tig#r.19, A=1638 nt (start:177, end:198) B=3531543 nt (start:1310669, end:1310690) CALCULATED DISTANCE APART: -2202335 < -2000 Pairs unsatisfied in distance within a contig. Pair (GCAGAATCTTGAAGCCCAAGG - AGGACATGACTCTTGCTGTAC) on contig 6 (6870868 nt) Astart:1137814 Aend:1137793 Bstart:1129387 Bend:1129408 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459839, end:459818) A=1345436 nt (start:25821, end:25800) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATATAAGTCTGAATTTTATAG - CCCAATTGGTGTCGCTAACAC) on contig 41 (667251 nt) Astart:88478 Aend:88457 Bstart:75798 Bend:75819 CALCULATED DISTANCE APART: 12680 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#33 -> -492044 <- tig#32, A=1290487 nt (start:1236067, end:1236088) B=972151 nt (start:457624, end:457603) CALCULATED DISTANCE APART: -492044 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219101, end:4219080) A=2598 nt (start:2520, end:2499) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#182 -> -7664 <- tig#65, B=10146 nt (start:9098, end:9119) A=286124 nt (start:26616, end:26595) CALCULATED DISTANCE APART: -7664 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.48 -> -3108448 <- tig#12, B=487359 nt (start:404309, end:404288) A=2766197 nt (start:2724139, end:2724118) CALCULATED DISTANCE APART: -3108448 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#283 -> -3818458 <- tig#2, A=1768 nt (start:533, end:554) B=5014909 nt (start:3837223, end:3837202) CALCULATED DISTANCE APART: -3818458 < -2000 Pairs unsatisfied in distance within a contig. Pair (ACTCCCATCAAAAGATGGTTG - CGTAACGAAGATGTTCTTGGC) on contig 49 (399963 nt) Astart:43310 Aend:43331 Bstart:43351 Bend:43330 CALCULATED DISTANCE APART: 41 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.34 -> -1666242 <- tig#93, B=1705564 nt (start:1679299, end:1679278) A=152036 nt (start:6943, end:6922) CALCULATED DISTANCE APART: -1666242 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#81 -> -151705 <- tig#127, A=258617 nt (start:139927, end:139948) B=80830 nt (start:53015, end:52994) CALCULATED DISTANCE APART: -151705 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#283 -> -3818458 <- tig#2, A=1768 nt (start:483, end:504) B=5014909 nt (start:3837173, end:3837152) CALCULATED DISTANCE APART: -3818458 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#135 -> -196097 <- tig#r.6, A=39094 nt (start:37606, end:37627) B=6870868 nt (start:6656259, end:6656280) CALCULATED DISTANCE APART: -196097 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AAAAGTAATTGACATGCTTAG - TGTGTATGGCTAGGATGGTTG) on contig 9 (3747885 nt) Astart:2849114 Aend:2849135 Bstart:2856727 Bend:2856748 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -214279 <- tig#6, A=354284 nt (start:132388, end:132409) B=6870868 nt (start:12383, end:12362) CALCULATED DISTANCE APART: -214279 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219501, end:4219480) A=2598 nt (start:2120, end:2099) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig. Pair (TAATATACATAAATGAATCAA - TAATAAGATTCCCACGCTTCA) on contig 37 (853709 nt) Astart:838439 Aend:838418 Bstart:822934 Bend:822955 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#14 -> -765455 <- tig#43, B=2271162 nt (start:2082929, end:2082950) A=1235946 nt (start:597222, end:597201) CALCULATED DISTANCE APART: -765455 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTCGTAAATGCGAATGGCTTG - TGGTGGTGCGTATAAAAGTTG) on contig 15 (3712591 nt) Astart:1717493 Aend:1717514 Bstart:1730525 Bend:1730546 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#19 -> -9908551 <- tig#6, A=3531543 nt (start:469576, end:469597) B=6870868 nt (start:6866584, end:6866563) CALCULATED DISTANCE APART: -9908551 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135378, end:135399) B=15068 nt (start:2298, end:2319) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -4201 <- tig#r.96, A=262460 nt (start:244271, end:244292) B=91302 nt (start:85290, end:85311) CALCULATED DISTANCE APART: -4201 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TCTGGGATTCTCCCGGTAAAT - TTGTAGTTTATTCCACCTCAG) on contig 4 (3837743 nt) Astart:2358566 Aend:2358587 Bstart:2359496 Bend:2359517 Pairs unsatisfied in pairing logic within a contig. Pair (TTTGGTAACGAAAGTAGAAGA - GAAAGGGCTTGCCAAAAGAAA) on contig 19 (3531543 nt) Astart:3060136 Aend:3060115 Bstart:3048587 Bend:3048566 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#33 -> -492044 <- tig#32, A=1290487 nt (start:1235587, end:1235608) B=972151 nt (start:457144, end:457123) CALCULATED DISTANCE APART: -492044 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185954, end:4185933) A=3712591 nt (start:607, end:586) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.257 -> -2902765 <- tig#8, B=1995 nt (start:1261, end:1240) A=5070776 nt (start:2921504, end:2921483) CALCULATED DISTANCE APART: -2902765 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GAAACATAGTGGAGATCATAT - TCACTCTAAATTTAACGTTAG) on contig 15 (3712591 nt) Astart:1718223 Aend:1718244 Bstart:1729795 Bend:1729816 Pairs unsatisfied in distance within a contig. Pair (CCTAAGTAGTGTATCCTTGTT - CTTCTAACAAGGATACACTAC) on contig 53 (354284 nt) Astart:325777 Aend:325798 Bstart:325803 Bend:325782 CALCULATED DISTANCE APART: 26 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#2 -> -6421333 <- tig#11, A=5014909 nt (start:2804979, end:2805000) B=4628067 nt (start:4231403, end:4231382) CALCULATED DISTANCE APART: -6421333 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185539, end:4185518) A=3712591 nt (start:1022, end:1001) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GACTATTAAGTGTAATTCTCA - TGTTAACAAATATCTTATACC) on contig 15 (3712591 nt) Astart:1719013 Aend:1719034 Bstart:1729005 Bend:1729026 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#54 -> -34130 <- tig#522, B=625914 nt (start:572636, end:572657) A=1099 nt (start:852, end:831) CALCULATED DISTANCE APART: -34130 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.35 -> -676591 <- tig#2, B=1135475 nt (start:599480, end:599459) A=5014909 nt (start:97111, end:97090) CALCULATED DISTANCE APART: -676591 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#21 -> -4085243 <- tig#2, B=1811326 nt (start:311038, end:311059) A=5014909 nt (start:2604955, end:2604934) CALCULATED DISTANCE APART: -4085243 < -2000 Pairs unsatisfied in distance within a contig. Pair (CGTCCTAGCACCTCTTTATAT - ACCATTGTTGAATTCATCAGA) on contig 43 (1235946 nt) Astart:243906 Aend:243885 Bstart:226496 Bend:226517 CALCULATED DISTANCE APART: 17410 Pairs unsatisfied in distance within a contig. Pair (TGTTTGTAGTAGCTTCATATA - TTGCCACTGCCATGAAATCCA) on contig 14 (2271162 nt) Astart:1739862 Aend:1739883 Bstart:2002434 Bend:2002413 CALCULATED DISTANCE APART: 262572 Pairs unsatisfied in pairing logic within a contig. Pair (TCCTCAATGTCAAAGCCGAAA - ATTAAAAACAGCCCAAAAATT) on contig 53 (354284 nt) Astart:242996 Aend:242975 Bstart:340124 Bend:340145 Pairs unsatisfied in distance within a contig. Pair (AATTCATTTCCAGTCAAAGCC - GCCTCTTGCCTCTAATCATTT) on contig 1 (4853111 nt) Astart:346195 Aend:346216 Bstart:391472 Bend:391451 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.42 -> -1433157 <- tig#20, B=659641 nt (start:2263, end:2242) A=2328057 nt (start:1450894, end:1450873) CALCULATED DISTANCE APART: -1433157 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CATATTACTGGTTAAAGAAGC - ATCTTTTCTGGTTGCCCCAGT) on contig 14 (2271162 nt) Astart:1853279 Aend:1853258 Bstart:2002539 Bend:2002518 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:729897, end:729918) B=3531543 nt (start:3199471, end:3199450) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.46 -> -1210864 <- tig#16, B=577887 nt (start:502394, end:502373) A=2098954 nt (start:728470, end:728449) CALCULATED DISTANCE APART: -1210864 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4186259, end:4186238) A=3712591 nt (start:302, end:281) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AAACCCCAAACCTTTGGTCGC - CAAATCAAGATAAACTTCTTA) on contig 14 (2271162 nt) Astart:658516 Aend:658495 Bstart:495395 Bend:495374 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#120 -> -1341554 <- tig#29, B=44710 nt (start:43752, end:43773) A=1463708 nt (start:1360596, end:1360575) CALCULATED DISTANCE APART: -1341554 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -1631868 <- tig#18, A=736718 nt (start:271487, end:271508) B=1738864 nt (start:1186637, end:1186616) CALCULATED DISTANCE APART: -1631868 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728923, end:728944) A=1096 nt (start:1008, end:987) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459964, end:459943) A=1345436 nt (start:25696, end:25675) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CGAAATTATAGAATTTTAATG - TAATTTATTTCATGAAATAGC) on contig 19 (3531543 nt) Astart:3058333 Aend:3058312 Bstart:3050387 Bend:3050366 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -1443756 <- tig#r.4, A=2650694 nt (start:2066513, end:2066534) B=3837743 nt (start:2958168, end:2958189) CALCULATED DISTANCE APART: -1443756 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#77 -> -122338 <- tig#99, B=160344 nt (start:25089, end:25110) A=88102 nt (start:7083, end:7062) CALCULATED DISTANCE APART: -122338 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730367, end:730388) B=3531543 nt (start:3199941, end:3199920) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459559, end:459538) A=1345436 nt (start:26101, end:26080) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.364 -> -57406 <- tig#98, B=1417 nt (start:1393, end:1372) A=88184 nt (start:76013, end:75992) CALCULATED DISTANCE APART: -57406 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATTATAATAGGCTAAACCATA - ATTTTTGAAAGACAGAATTGC) on contig 19 (3531543 nt) Astart:3058233 Aend:3058212 Bstart:3050487 Bend:3050466 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.47 -> -199625 <- tig#2, B=471458 nt (start:121734, end:121713) A=5014909 nt (start:97891, end:97870) CALCULATED DISTANCE APART: -199625 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#53 -> -314812 <- tig#75, B=354284 nt (start:24859, end:24880) A=373953 nt (start:5387, end:5366) CALCULATED DISTANCE APART: -314812 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459404, end:459383) A=1345436 nt (start:26256, end:26235) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#118 -> -33564 <- tig#97, B=66247 nt (start:37952, end:37973) A=91050 nt (start:25269, end:25248) CALCULATED DISTANCE APART: -33564 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.115 -> -3755846 <- tig#9, B=66709 nt (start:41008, end:40987) A=3747885 nt (start:3734838, end:3734817) CALCULATED DISTANCE APART: -3755846 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATCACACCAAAGATTAGGGTG - AGTTGTCTTTGTTTCCAAATT) on contig 15 (3712591 nt) Astart:1791984 Aend:1791963 Bstart:2056047 Bend:2056068 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282402, end:282423) B=2196 nt (start:583, end:562) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGAGCAACAACAATACCAAAG - CACAAAACTCCTTCTGCATCA) on contig 41 (667251 nt) Astart:88638 Aend:88617 Bstart:75958 Bend:75979 CALCULATED DISTANCE APART: 12680 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -1168778 <- tig#384, A=5070776 nt (start:3883240, end:3883261) B=1359 nt (start:1242, end:1221) CALCULATED DISTANCE APART: -1168778 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.74 -> -1813153 <- tig#17, B=238371 nt (start:59111, end:59090) A=1959065 nt (start:1774042, end:1774021) CALCULATED DISTANCE APART: -1813153 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#34 -> -332078 <- tig#53, B=1705564 nt (start:1679280, end:1679301) A=354284 nt (start:325794, end:325773) CALCULATED DISTANCE APART: -332078 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459229, end:459208) A=1345436 nt (start:26431, end:26410) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:458669, end:458648) A=1345436 nt (start:26991, end:26970) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -621133 <- tig#r.66, A=2766197 nt (start:2129773, end:2129794) B=201913 nt (start:197204, end:197225) CALCULATED DISTANCE APART: -621133 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.34 -> -1667131 <- tig#93, B=1705564 nt (start:1679298, end:1679277) A=152036 nt (start:7833, end:7812) CALCULATED DISTANCE APART: -1667131 < -2000 Pairs unsatisfied in distance within a contig. Pair (GTAATCAAACTATTTAGCAAG - AGCTAGTTTAACACCGCAGAG) on contig 6 (6870868 nt) Astart:1138379 Aend:1138358 Bstart:1129952 Bend:1129973 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#22 -> -1615678 <- tig#20, B=1636463 nt (start:11011, end:11032) A=2328057 nt (start:10226, end:10205) CALCULATED DISTANCE APART: -1615678 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4186209, end:4186188) A=3712591 nt (start:352, end:331) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135433, end:135454) B=15068 nt (start:2243, end:2264) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.38 -> -1310007 <- tig#33, B=1143067 nt (start:1039059, end:1039038) A=1290487 nt (start:290948, end:290927) CALCULATED DISTANCE APART: -1310007 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:458604, end:458583) A=1345436 nt (start:27056, end:27035) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig. Pair (TAAGATTTTGAAGTCATGGAA - GAGTCTTCCAAATTTAATTGA) on contig 5 (3689108 nt) Astart:1169637 Aend:1169658 Bstart:1184772 Bend:1184751 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2970, end:2991) A=258385 nt (start:1506, end:1485) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GTGAAAATCAAACATTGAAGA - CTTGTGTAGAACACGTGACAC) on contig 4 (3837743 nt) Astart:2357911 Aend:2357932 Bstart:2360151 Bend:2360172 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#25 -> -1269344 <- tig#r.12, A=1290536 nt (start:70836, end:70857) B=2766197 nt (start:2696553, end:2696574) CALCULATED DISTANCE APART: -1269344 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#34 -> -1107967 <- tig#79, A=1705564 nt (start:661831, end:661852) B=136600 nt (start:84234, end:84213) CALCULATED DISTANCE APART: -1107967 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#27 -> -63590 <- tig#r.547, A=1227811 nt (start:1145089, end:1145110) B=1064 nt (start:196, end:217) CALCULATED DISTANCE APART: -63590 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTAATGAAATGTTATATGGTC - GTTACCCAGCGGTCCTAATTT) on contig 19 (3531543 nt) Astart:3058318 Aend:3058297 Bstart:3050402 Bend:3050381 Pairs unsatisfied in pairing logic within a contig. Pair (GTAGTTTGCAATATATAGTAA - GATGAGTCGAGGATCCACGTA) on contig 19 (3531543 nt) Astart:3060391 Aend:3060370 Bstart:3048332 Bend:3048311 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16750, end:16729) A=1227811 nt (start:7065, end:7044) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#9 -> -2729016 <- tig#69, A=3747885 nt (start:1134338, end:1134359) B=186132 nt (start:135469, end:135448) CALCULATED DISTANCE APART: -2729016 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#453 -> -16426 <- tig#68, A=1197 nt (start:1094, end:1115) B=189499 nt (start:36323, end:36302) CALCULATED DISTANCE APART: -16426 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459064, end:459043) A=1345436 nt (start:26596, end:26575) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.20 -> -2413469 <- tig#37, B=2328057 nt (start:2055465, end:2055444) A=853709 nt (start:378004, end:377983) CALCULATED DISTANCE APART: -2413469 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATATTGATGAAGTATGTGTGT - TATACAAGAATAATGTAAGTT) on contig 5 (3689108 nt) Astart:1178622 Aend:1178601 Bstart:1163488 Bend:1163509 CALCULATED DISTANCE APART: 15134 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -1335762 <- tig#4, B=3747885 nt (start:2857382, end:2857403) A=3837743 nt (start:465259, end:465238) CALCULATED DISTANCE APART: -1335762 < -2000 Pairs unsatisfied in distance within a contig. Pair (GGTTTTCTTGAATACCTCGAG - AAAATCATTTACTATAAATGA) on contig 2 (5014909 nt) Astart:1269266 Aend:1269287 Bstart:1283928 Bend:1283907 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#29 -> -579824 <- tig#28, A=1463708 nt (start:1144300, end:1144321) B=1171658 nt (start:280416, end:280395) CALCULATED DISTANCE APART: -579824 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:134793, end:134814) B=15068 nt (start:2883, end:2904) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.34 -> -1768503 <- tig#8, B=1705564 nt (start:1679306, end:1679285) A=5070776 nt (start:109197, end:109176) CALCULATED DISTANCE APART: -1768503 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.101 -> -46827 <- tig#107, B=84691 nt (start:23869, end:23848) A=68734 nt (start:42958, end:42937) CALCULATED DISTANCE APART: -46827 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460799, end:460778) A=1345436 nt (start:24861, end:24840) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#133 -> -6875849 <- tig#6, A=34073 nt (start:2498, end:2519) B=6870868 nt (start:6864274, end:6864253) CALCULATED DISTANCE APART: -6875849 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#12 -> -245465 <- tig#56, B=2766197 nt (start:2696551, end:2696572) A=262460 nt (start:195819, end:195798) CALCULATED DISTANCE APART: -245465 < -2000 Pairs unsatisfied in distance within a contig. Pair (GATCTTTAAAGATACACATCT - AGAGTATTTTTCTCTCATGGA) on contig 34 (1705564 nt) Astart:679789 Aend:679768 Bstart:664826 Bend:664847 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig. Pair (ATCTAGCTGGACCATTTATAT - AAAGAGATAACCAAAATCTCT) on contig 34 (1705564 nt) Astart:679344 Aend:679323 Bstart:664381 Bend:664402 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17175, end:17154) A=1227811 nt (start:6640, end:6619) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#90 -> -70395 <- tig#143, A=112304 nt (start:36951, end:36972) B=24293 nt (start:15042, end:15021) CALCULATED DISTANCE APART: -70395 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082512, end:2082533) B=976128 nt (start:961010, end:961031) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AACGACTTCGTTTAGAGCCAT - TAAACTAATATCTTGACGTAT) on contig 15 (3712591 nt) Astart:1717083 Aend:1717104 Bstart:1730935 Bend:1730956 Pairs unsatisfied in pairing logic within a contig. Pair (AATAAAATATGTGATTTTTTA - TAGCCCAAGTAAGGGCTTCCA) on contig 19 (3531543 nt) Astart:3059531 Aend:3059510 Bstart:3049192 Bend:3049171 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#46 -> -3500669 <- tig#6, A=577887 nt (start:567075, end:567096) B=6870868 nt (start:3509857, end:3509836) CALCULATED DISTANCE APART: -3500669 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:283012, end:283033) B=2196 nt (start:1193, end:1172) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AAGACAGATCCTCAATGTCAA - TAAAATTTGAGCTTTAATTCA) on contig 53 (354284 nt) Astart:243004 Aend:242983 Bstart:340264 Bend:340285 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.403 -> -2330792 <- tig#13, B=1321 nt (start:390, end:369) A=2650694 nt (start:2350402, end:2350381) CALCULATED DISTANCE APART: -2330792 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TATATATATAGAGAGATTGAT - AACTAAAAAACAGCAAACAGA) on contig 19 (3531543 nt) Astart:3058878 Aend:3058857 Bstart:3049842 Bend:3049821 Pairs unsatisfied in distance within a contig. Pair (ATGAGATGTGATTGGCTAATA - AACAGACATTCTGGTAGAACT) on contig 37 (853709 nt) Astart:838819 Aend:838798 Bstart:823314 Bend:823335 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#433 -> -944078 <- tig#r.29, A=1238 nt (start:801, end:822) B=1463708 nt (start:500067, end:500088) CALCULATED DISTANCE APART: -944078 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAATGAATCAATAATGAAAAA - TGCATGGCAGTAATAAGATTC) on contig 37 (853709 nt) Astart:838429 Aend:838408 Bstart:822924 Bend:822945 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#81 -> -2917593 <- tig#r.7, A=258617 nt (start:239335, end:239356) B=3534247 nt (start:615936, end:615957) CALCULATED DISTANCE APART: -2917593 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728698, end:728719) A=1096 nt (start:783, end:762) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig. Pair (AATACCTTGGGGCGAGTATAT - CCAAGTCCAGAAGAGACAAGT) on contig 41 (667251 nt) Astart:88723 Aend:88702 Bstart:76043 Bend:76064 CALCULATED DISTANCE APART: 12680 Pairs unsatisfied in distance within a contig. Pair (TGGTCACGAAAAACAGAATCG - TACTGTATTTGTTACTTGAAC) on contig 5 (3689108 nt) Astart:1170192 Aend:1170213 Bstart:1185327 Bend:1185306 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -491503 <- tig#7, B=1171658 nt (start:875162, end:875183) A=3534247 nt (start:215007, end:214986) CALCULATED DISTANCE APART: -491503 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219491, end:4219470) A=2598 nt (start:2130, end:2109) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#120 -> -1341554 <- tig#29, B=44710 nt (start:44127, end:44148) A=1463708 nt (start:1360971, end:1360950) CALCULATED DISTANCE APART: -1341554 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2505, end:2526) A=258385 nt (start:1041, end:1020) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.481 -> -1044999 <- tig#43, B=1145 nt (start:1090, end:1069) A=1235946 nt (start:1063909, end:1063888) CALCULATED DISTANCE APART: -1044999 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#8 -> -2169750 <- tig#r.60, A=5070776 nt (start:2977187, end:2977208) B=232804 nt (start:136643, end:136664) CALCULATED DISTANCE APART: -2169750 < -2000 Pairs unsatisfied in distance within a contig. Pair (AACGAGGATATAAAATGGATG - CTTTACCTATTCCTACTCATC) on contig 30 (1050452 nt) Astart:649844 Aend:649865 Bstart:665610 Bend:665589 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#9 -> -4937053 <- tig#r.19, A=3747885 nt (start:435208, end:435229) B=3531543 nt (start:1887167, end:1887188) CALCULATED DISTANCE APART: -4937053 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.58 -> -1866109 <- tig#19, B=374416 nt (start:13996, end:13975) A=3531543 nt (start:1872113, end:1872092) CALCULATED DISTANCE APART: -1866109 < -2000 Pairs unsatisfied in distance within a contig. Pair (CCATATAAAGTATGGTTTTCG - AAGATAAATATCTATTTCTTT) on contig 109 (66564 nt) Astart:5829 Aend:5808 Bstart:193 Bend:214 CALCULATED DISTANCE APART: 5636 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#118 -> -33564 <- tig#97, B=66247 nt (start:38132, end:38153) A=91050 nt (start:25449, end:25428) CALCULATED DISTANCE APART: -33564 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459369, end:459348) A=1345436 nt (start:26291, end:26270) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136418, end:136439) B=15068 nt (start:1258, end:1279) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#114 -> -53761 <- tig#r.131, A=54818 nt (start:17416, end:17437) B=36503 nt (start:144, end:165) CALCULATED DISTANCE APART: -53761 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#114 -> -27617 <- tig#167, A=54818 nt (start:17416, end:17437) B=25236 nt (start:10215, end:10194) CALCULATED DISTANCE APART: -27617 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAGTTTATGATATATGTAATA - GGAATGATCAGAGATAACCTA) on contig 6 (6870868 nt) Astart:1138689 Aend:1138668 Bstart:1130234 Bend:1130255 CALCULATED DISTANCE APART: 8455 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#120 -> -1341554 <- tig#29, B=44710 nt (start:43327, end:43348) A=1463708 nt (start:1360171, end:1360150) CALCULATED DISTANCE APART: -1341554 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#12 -> -245484 <- tig#56, B=2766197 nt (start:2696540, end:2696561) A=262460 nt (start:195827, end:195806) CALCULATED DISTANCE APART: -245484 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCCAAAGTGTGTTTTTTAAAA - ATCCTTGCTATTTTGTTACTT) on contig 5 (3689108 nt) Astart:1169492 Aend:1169513 Bstart:1184627 Bend:1184606 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in pairing logic within a contig. Pair (CCTCATGTTTTGCCTCTCATA - GCTTTCGTCGTCTCCTACAAT) on contig 9 (3747885 nt) Astart:2878254 Aend:2878233 Bstart:2862911 Bend:2862890 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730537, end:730558) B=3531543 nt (start:3200111, end:3200090) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459164, end:459143) A=1345436 nt (start:26496, end:26475) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#12 -> -167604 <- tig#557, B=2766197 nt (start:2579544, end:2579565) A=1050 nt (start:951, end:930) CALCULATED DISTANCE APART: -167604 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460674, end:460653) A=1345436 nt (start:24986, end:24965) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.46 -> -1210864 <- tig#16, B=577887 nt (start:502384, end:502363) A=2098954 nt (start:728480, end:728459) CALCULATED DISTANCE APART: -1210864 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#9 -> -6907516 <- tig#r.5, A=3747885 nt (start:149298, end:149319) B=3689108 nt (start:360179, end:360200) CALCULATED DISTANCE APART: -6907516 < -2000 Pairs unsatisfied in distance within a contig. Pair (TCTTTTTCTATTACTATTAAC - CATTTCCAAAAACAACATAAA) on contig 13 (2650694 nt) Astart:2350797 Aend:2350776 Bstart:2327449 Bend:2327470 CALCULATED DISTANCE APART: 23348 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459624, end:459603) A=1345436 nt (start:26036, end:26015) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -977653 <- tig#28, B=4628067 nt (start:305229, end:305208) A=1171658 nt (start:692424, end:692403) CALCULATED DISTANCE APART: -977653 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12276, end:12255) A=91302 nt (start:11917, end:11896) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.257 -> -2902765 <- tig#8, B=1995 nt (start:1436, end:1415) A=5070776 nt (start:2921329, end:2921308) CALCULATED DISTANCE APART: -2902765 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459484, end:459463) A=1345436 nt (start:26176, end:26155) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAGATGGTGTATTATGTAGCT - AAAGAACATTTCCATTGGCCA) on contig 30 (1050452 nt) Astart:649954 Aend:649975 Bstart:665720 Bend:665699 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#6 -> -287190 <- tig#95, B=6870868 nt (start:6656260, end:6656281) A=92653 nt (start:92582, end:92561) CALCULATED DISTANCE APART: -287190 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CACCAATCACCAATTTTTACA - AAATTGCAAGGGATATTTCAG) on contig 19 (3531543 nt) Astart:3058298 Aend:3058277 Bstart:3050422 Bend:3050401 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#34 -> -2492729 <- tig#5, A=1705564 nt (start:662241, end:662262) B=3689108 nt (start:1469406, end:1469385) CALCULATED DISTANCE APART: -2492729 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#67 -> -163343 <- tig#51, B=197815 nt (start:180390, end:180411) A=875428 nt (start:165918, end:165897) CALCULATED DISTANCE APART: -163343 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TCGCCACGGTTTCCAAGGAAA - CATATATACGCCAAAGTAAAT) on contig 15 (3712591 nt) Astart:1718518 Aend:1718539 Bstart:1729500 Bend:1729521 Pairs unsatisfied in distance within a contig. Pair (ATATAACTCCATGATGAGTAT - AACTAATCAATCAATATCTTG) on contig 1 (4853111 nt) Astart:346685 Aend:346706 Bstart:391962 Bend:391941 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig. Pair (GTGTGTGTTGGCATTTAGATG - TGTTGAAGATACTAGTATACA) on contig 5 (3689108 nt) Astart:1178607 Aend:1178586 Bstart:1163473 Bend:1163494 CALCULATED DISTANCE APART: 15134 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730137, end:730158) B=3531543 nt (start:3199711, end:3199690) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#57 -> -4506482 <- tig#r.11, A=258385 nt (start:255906, end:255927) B=4628067 nt (start:104064, end:104085) CALCULATED DISTANCE APART: -4506482 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#74 -> -258383 <- tig#56, A=238371 nt (start:58941, end:58962) B=262460 nt (start:98953, end:98932) CALCULATED DISTANCE APART: -258383 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459544, end:459523) A=1345436 nt (start:26116, end:26095) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16990, end:16969) A=1227811 nt (start:6825, end:6804) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#118 -> -33564 <- tig#97, B=66247 nt (start:37932, end:37953) A=91050 nt (start:25249, end:25228) CALCULATED DISTANCE APART: -33564 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATGAAGAAGTTGAATCTGAAT - TAACACAACCACACGCCTGAA) on contig 1 (4853111 nt) Astart:346405 Aend:346426 Bstart:391682 Bend:391661 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#6 -> -6284042 <- tig#42, A=6870868 nt (start:994762, end:994783) B=659641 nt (start:427936, end:427915) CALCULATED DISTANCE APART: -6284042 < -2000 Pairs unsatisfied in distance within a contig. Pair (AATAATACCAATTTGTATTCA - AATAGTAGAAAGATGAGAACT) on contig 34 (1705564 nt) Astart:679654 Aend:679633 Bstart:664691 Bend:664712 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4186104, end:4186083) A=3712591 nt (start:457, end:436) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGCGTTAGATAGAAATATGGA - AAGTGTTTCTCTTCGCTTCTT) on contig 1 (4853111 nt) Astart:346520 Aend:346541 Bstart:391797 Bend:391776 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -1335675 <- tig#4, B=3747885 nt (start:2858642, end:2858663) A=3837743 nt (start:466432, end:466411) CALCULATED DISTANCE APART: -1335675 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260752, end:2260773) B=356404 nt (start:342472, end:342493) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.7 -> -1712201 <- tig#26, B=3534247 nt (start:705597, end:705576) A=1332708 nt (start:1026604, end:1026583) CALCULATED DISTANCE APART: -1712201 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.29 -> -1050288 <- tig#12, B=1463708 nt (start:953724, end:953703) A=2766197 nt (start:116564, end:116543) CALCULATED DISTANCE APART: -1050288 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#22 -> -6369342 <- tig#6, B=1636463 nt (start:14590, end:14611) A=6870868 nt (start:4767469, end:4767448) CALCULATED DISTANCE APART: -6369342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#265 -> -3126344 <- tig#4, A=1946 nt (start:1761, end:1782) B=3837743 nt (start:3146159, end:3146138) CALCULATED DISTANCE APART: -3126344 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219336, end:4219315) A=2598 nt (start:2285, end:2264) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#95 -> -24340 <- tig#49, B=92653 nt (start:92464, end:92485) A=399963 nt (start:44151, end:44130) CALCULATED DISTANCE APART: -24340 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TCTTATTATTGACTATTAAGT - TATCTTATACCAAAATTCTAT) on contig 15 (3712591 nt) Astart:1719003 Aend:1719024 Bstart:1729015 Bend:1729036 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#3 -> -3618470 <- tig#27, B=3889482 nt (start:316504, end:316525) A=1227811 nt (start:65492, end:65471) CALCULATED DISTANCE APART: -3618470 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#7 -> -2355160 <- tig#r.32, A=3534247 nt (start:1604934, end:1604955) B=972151 nt (start:526304, end:526325) CALCULATED DISTANCE APART: -2355160 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17310, end:17289) A=1227811 nt (start:6505, end:6484) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#4 -> -5277308 <- tig#6, B=3837743 nt (start:117860, end:117881) A=6870868 nt (start:1577425, end:1577404) CALCULATED DISTANCE APART: -5277308 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.29 -> -830658 <- tig#48, B=1463708 nt (start:513273, end:513252) A=487359 nt (start:337385, end:337364) CALCULATED DISTANCE APART: -830658 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#33 -> -492044 <- tig#32, A=1290487 nt (start:1235742, end:1235763) B=972151 nt (start:457299, end:457278) CALCULATED DISTANCE APART: -492044 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#283 -> -3818458 <- tig#2, A=1768 nt (start:648, end:669) B=5014909 nt (start:3837338, end:3837317) CALCULATED DISTANCE APART: -3818458 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#46 -> -3144173 <- tig#12, B=577887 nt (start:139363, end:139384) A=2766197 nt (start:2725649, end:2725628) CALCULATED DISTANCE APART: -3144173 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.86 -> -592847 <- tig#43, B=280231 nt (start:15155, end:15134) A=1235946 nt (start:597692, end:597671) CALCULATED DISTANCE APART: -592847 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.91 -> -51057 <- tig#31, B=101959 nt (start:15855, end:15834) A=976128 nt (start:55202, end:55181) CALCULATED DISTANCE APART: -51057 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -1168778 <- tig#384, A=5070776 nt (start:3882870, end:3882891) B=1359 nt (start:872, end:851) CALCULATED DISTANCE APART: -1168778 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#63 -> -139061 <- tig#132, B=274372 nt (start:149979, end:150000) A=34686 nt (start:34668, end:34647) CALCULATED DISTANCE APART: -139061 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.84 -> -211488 <- tig#132, B=197079 nt (start:196820, end:196799) A=34686 nt (start:34668, end:34647) CALCULATED DISTANCE APART: -211488 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.53 -> -340469 <- tig#132, B=354284 nt (start:325801, end:325780) A=34686 nt (start:34668, end:34647) CALCULATED DISTANCE APART: -340469 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.541 -> -15702 <- tig#132, B=1068 nt (start:1034, end:1013) A=34686 nt (start:34668, end:34647) CALCULATED DISTANCE APART: -15702 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.53 -> -340468 <- tig#132, B=354284 nt (start:325800, end:325779) A=34686 nt (start:34668, end:34647) CALCULATED DISTANCE APART: -340468 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.98 -> -30945 <- tig#132, B=88184 nt (start:16277, end:16256) A=34686 nt (start:34668, end:34647) CALCULATED DISTANCE APART: -30945 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.34 -> -1693975 <- tig#132, B=1705564 nt (start:1679307, end:1679286) A=34686 nt (start:34668, end:34647) CALCULATED DISTANCE APART: -1693975 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.167 -> -39857 <- tig#132, B=25236 nt (start:25189, end:25168) A=34686 nt (start:34668, end:34647) CALCULATED DISTANCE APART: -39857 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.541 -> -15699 <- tig#132, B=1068 nt (start:1031, end:1010) A=34686 nt (start:34668, end:34647) CALCULATED DISTANCE APART: -15699 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATGAAGAAACTGGGGTCAGTT - TAATCCTAGTCAAGTACACAA) on contig 1 (4853111 nt) Astart:346435 Aend:346456 Bstart:391712 Bend:391691 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig. Pair (TTTCTTGAACGTTGACAGGGG - CTTATCTAGCTACCAAAGTTC) on contig 2 (5014909 nt) Astart:1269191 Aend:1269212 Bstart:1283853 Bend:1283832 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig. Pair (AATTTGTGATATGTCTATAAT - TCGTTCTATGTCTAATTCCTG) on contig 25 (1290536 nt) Astart:990244 Aend:990223 Bstart:975710 Bend:975731 CALCULATED DISTANCE APART: 14534 Pairs unsatisfied in distance within a contig. Pair (TTTTTTCTGTAGGCGATAGAT - CATGAGAAACACAAATATTTT) on contig 37 (853709 nt) Astart:538577 Aend:538598 Bstart:551249 Bend:551228 CALCULATED DISTANCE APART: 12672 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.257 -> -2902765 <- tig#8, B=1995 nt (start:1631, end:1610) A=5070776 nt (start:2921134, end:2921113) CALCULATED DISTANCE APART: -2902765 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459684, end:459663) A=1345436 nt (start:25976, end:25955) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TCGTCTCGGTCTCTTACATCT - ACGATGTATGTGATCTGCGAA) on contig 15 (3712591 nt) Astart:1717018 Aend:1717039 Bstart:1731000 Bend:1731021 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:281947, end:281968) B=2196 nt (start:128, end:107) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.257 -> -2902765 <- tig#8, B=1995 nt (start:1301, end:1280) A=5070776 nt (start:2921464, end:2921443) CALCULATED DISTANCE APART: -2902765 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259702, end:2259723) B=356404 nt (start:343522, end:343543) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATCAATGGGCCTTTAATGGGT - AACCTGGGAGCATGACAATCC) on contig 1 (4853111 nt) Astart:345955 Aend:345976 Bstart:391232 Bend:391211 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459804, end:459783) A=1345436 nt (start:25856, end:25835) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282447, end:282468) B=2196 nt (start:628, end:607) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#84 -> -1659585 <- tig#34, A=197079 nt (start:196797, end:196818) B=1705564 nt (start:1679303, end:1679282) CALCULATED DISTANCE APART: -1659585 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#84 -> -306086 <- tig#53, A=197079 nt (start:196797, end:196818) B=354284 nt (start:325804, end:325783) CALCULATED DISTANCE APART: -306086 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#31 -> -1623625 <- tig#r.51, A=976128 nt (start:42074, end:42095) B=875428 nt (start:165857, end:165878) CALCULATED DISTANCE APART: -1623625 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTGTTCTTGAAGAGGATGGTA - CCAAGGTGGAAGGTCTCCATC) on contig 4 (3837743 nt) Astart:2357886 Aend:2357907 Bstart:2360176 Bend:2360197 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#283 -> -3818458 <- tig#2, A=1768 nt (start:538, end:559) B=5014909 nt (start:3837228, end:3837207) CALCULATED DISTANCE APART: -3818458 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.38 -> -1310007 <- tig#33, B=1143067 nt (start:1039054, end:1039033) A=1290487 nt (start:290953, end:290932) CALCULATED DISTANCE APART: -1310007 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#120 -> -1341554 <- tig#29, B=44710 nt (start:43322, end:43343) A=1463708 nt (start:1360166, end:1360145) CALCULATED DISTANCE APART: -1341554 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#4 -> -1562545 <- tig#101, A=3837743 nt (start:2278732, end:2278753) B=84691 nt (start:23534, end:23513) CALCULATED DISTANCE APART: -1562545 < -2000 Pairs unsatisfied in distance within a contig. Pair (GGCTGGAATTGTTTCTATTGG - ACAATTCAATATCTAATCTGG) on contig 15 (3712591 nt) Astart:2103271 Aend:2103250 Bstart:2056457 Bend:2056478 CALCULATED DISTANCE APART: 46814 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#6 -> -2137849 <- tig#27, B=6870868 nt (start:5502580, end:5502601) A=1227811 nt (start:789561, end:789540) CALCULATED DISTANCE APART: -2137849 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460644, end:460623) A=1345436 nt (start:25016, end:24995) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082417, end:2082438) B=976128 nt (start:961105, end:961126) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTTGGAACAGGGTGTGAAGGA - AAAGGATTCAATTATATCATC) on contig 2 (5014909 nt) Astart:1269581 Aend:1269602 Bstart:1284243 Bend:1284222 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10603, end:10582) A=2766197 nt (start:2150960, end:2150939) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig. Pair (TATAGCATTTCTATTAGGAGA - GAAAAGACTAGTAATAAAGAG) on contig 15 (3712591 nt) Astart:3350035 Aend:3350056 Bstart:3375023 Bend:3375002 CALCULATED DISTANCE APART: 24988 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.257 -> -2902765 <- tig#8, B=1995 nt (start:1056, end:1035) A=5070776 nt (start:2921709, end:2921688) CALCULATED DISTANCE APART: -2902765 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTCCATTAGTTAGTAAAACAT - GTATAAAGAAAACAAATAAAA) on contig 34 (1705564 nt) Astart:679869 Aend:679848 Bstart:664906 Bend:664927 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#433 -> -944078 <- tig#r.29, A=1238 nt (start:736, end:757) B=1463708 nt (start:500132, end:500153) CALCULATED DISTANCE APART: -944078 < -2000 Pairs unsatisfied in distance within a contig. Pair (GCGTAAGAATTGTATCCTTGT - TTCTAACAAGGATACAATTCT) on contig 34 (1705564 nt) Astart:1679283 Aend:1679304 Bstart:1679309 Bend:1679288 CALCULATED DISTANCE APART: 26 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#34 -> -31470 <- tig#167, A=1705564 nt (start:1679283, end:1679304) B=25236 nt (start:25189, end:25168) CALCULATED DISTANCE APART: -31470 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460249, end:460228) A=1345436 nt (start:25411, end:25390) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459234, end:459213) A=1345436 nt (start:26426, end:26405) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.6 -> -1021234 <- tig#25, B=6870868 nt (start:12673, end:12652) A=1290536 nt (start:1028561, end:1028540) CALCULATED DISTANCE APART: -1021234 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CCACAAAAACACAAGCCAACG - AGATCAATCTTTATGTTTGGT) on contig 15 (3712591 nt) Astart:1716613 Aend:1716634 Bstart:1731405 Bend:1731426 Pairs unsatisfied in distance within a contig. Pair (AGCCACTCTCACCCATGTCGC - GCCACGGCAAGAGCATTCCCA) on contig 14 (2271162 nt) Astart:1537713 Aend:1537734 Bstart:2003199 Bend:2003178 CALCULATED DISTANCE APART: 465486 Pairs unsatisfied in pairing logic within a contig. Pair (AAAGTTAGATATCAGCTAGCA - CAAGGCACAATTATAATAAAA) on contig 19 (3531543 nt) Astart:3060466 Aend:3060445 Bstart:3048257 Bend:3048236 Pairs unsatisfied in pairing logic within a contig. Pair (AATGACACCAAAAATTAATTA - TAAATATAATAAGTAAGTTGA) on contig 15 (3712591 nt) Astart:1717163 Aend:1717184 Bstart:1730855 Bend:1730876 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460739, end:460718) A=1345436 nt (start:24921, end:24900) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#26 -> -90650 <- tig#95, B=1332708 nt (start:1310688, end:1310709) A=92653 nt (start:88630, end:88609) CALCULATED DISTANCE APART: -90650 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282047, end:282068) B=2196 nt (start:228, end:207) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:134953, end:134974) B=15068 nt (start:2723, end:2744) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#73 -> -397247 <- tig#43, A=171056 nt (start:19301, end:19322) B=1235946 nt (start:265492, end:265471) CALCULATED DISTANCE APART: -397247 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.21 -> -3157957 <- tig#14, B=1811326 nt (start:1176619, end:1176598) A=2271162 nt (start:2001338, end:2001317) CALCULATED DISTANCE APART: -3157957 < -2000 Pairs unsatisfied in distance within a contig. Pair (CATCTTAAATGGCAAGAAAAG - GTTTTCTCACATGCTTCTTGA) on contig 2 (5014909 nt) Astart:1269636 Aend:1269657 Bstart:1284298 Bend:1284277 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig. Pair (CTGAATTGTTGAAAATTCAGA - TTTCTGTTCTTTGGGGATCAT) on contig 2 (5014909 nt) Astart:1268586 Aend:1268607 Bstart:1283248 Bend:1283227 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in pairing logic within a contig. Pair (AAATCGAAGGGTCAAGAGTCC - GTTGATGTGGTTGAGACAAGA) on contig 15 (3712591 nt) Astart:1716773 Aend:1716794 Bstart:1731245 Bend:1731266 Pairs unsatisfied in distance within a contig. Pair (GACAAGAGGTATGTCTGAAAT - TGAATGTTATCATTTTCCACC) on contig 2 (5014909 nt) Astart:1269901 Aend:1269922 Bstart:1284563 Bend:1284542 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig. Pair (ATGAGGCAGAGACTTACATGC - CCTCTAAGTATTTTCAGAAGA) on contig 2 (5014909 nt) Astart:1269601 Aend:1269622 Bstart:1284263 Bend:1284242 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#38 -> -1000423 <- tig#78, B=1143067 nt (start:252870, end:252891) A=184063 nt (start:130226, end:130205) CALCULATED DISTANCE APART: -1000423 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTTACATTTAATTTTTTTGGG - TGGATACAATGGAGACAAGCC) on contig 6 (6870868 nt) Astart:1138039 Aend:1138018 Bstart:1129612 Bend:1129633 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#37 -> -812919 <- tig#48, B=853709 nt (start:77835, end:77856) A=487359 nt (start:57045, end:57024) CALCULATED DISTANCE APART: -812919 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#12 -> -245456 <- tig#56, B=2766197 nt (start:2696546, end:2696567) A=262460 nt (start:195805, end:195784) CALCULATED DISTANCE APART: -245456 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.38 -> -1309655 <- tig#33, B=1143067 nt (start:1037354, end:1037333) A=1290487 nt (start:292301, end:292280) CALCULATED DISTANCE APART: -1309655 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATATGTCTATAGATGTCCAAA - TTACTTCGTGTAGAACTTCTC) on contig 5 (3689108 nt) Astart:1169477 Aend:1169498 Bstart:1184612 Bend:1184591 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#63 -> -88275 <- tig#145, A=274372 nt (start:182881, end:182902) B=21756 nt (start:16784, end:16763) CALCULATED DISTANCE APART: -88275 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#37 -> -738657 <- tig#r.53, A=853709 nt (start:109422, end:109443) B=354284 nt (start:339914, end:339935) CALCULATED DISTANCE APART: -738657 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TGTTCTTCTGTCATTTGTTTT - ATCTAACATGAATTTGACATT) on contig 7 (3534247 nt) Astart:2255392 Aend:2255371 Bstart:2239384 Bend:2239363 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.38 -> -1426764 <- tig#29, B=1143067 nt (start:1039854, end:1039833) A=1463708 nt (start:406910, end:406889) CALCULATED DISTANCE APART: -1426764 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#56 -> -1319016 <- tig#29, B=262460 nt (start:154663, end:154684) A=1463708 nt (start:1231219, end:1231198) CALCULATED DISTANCE APART: -1319016 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.38 -> -1310113 <- tig#33, B=1143067 nt (start:1039534, end:1039513) A=1290487 nt (start:290579, end:290558) CALCULATED DISTANCE APART: -1310113 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTTAGAACGTTTTCGACATGC - CCAATGAGCTGTATTGAACAC) on contig 1 (4853111 nt) Astart:346595 Aend:346616 Bstart:391872 Bend:391851 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10233, end:10212) A=2766197 nt (start:2151330, end:2151309) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTGAAACCATTAATTGCTTGC - ATAAAACCACACGAGAGACAG) on contig 1 (4853111 nt) Astart:346885 Aend:346906 Bstart:392162 Bend:392141 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.167 -> -212195 <- tig#86, B=25236 nt (start:10214, end:10193) A=280231 nt (start:221981, end:221960) CALCULATED DISTANCE APART: -212195 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.107 -> -4786612 <- tig#6, B=68734 nt (start:38131, end:38110) A=6870868 nt (start:4768481, end:4768460) CALCULATED DISTANCE APART: -4786612 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATTTCTGAATGTCAACGTCTT - TTGTGTGAGATTCATTTATCA) on contig 5 (3689108 nt) Astart:1171817 Aend:1171838 Bstart:1186953 Bend:1186932 CALCULATED DISTANCE APART: 15136 Pairs unsatisfied in distance within a contig. Pair (TCATTAGGAGTCGTTTTAATG - GGAAGGGAGGCTTGGATAGGA) on contig 25 (1290536 nt) Astart:990164 Aend:990143 Bstart:975630 Bend:975651 CALCULATED DISTANCE APART: 14534 Pairs unsatisfied in pairing logic within a contig. Pair (TGTCTGTTCAGAGAGCCTTTA - CACACAAACTTTACAAACTCT) on contig 14 (2271162 nt) Astart:656923 Aend:656944 Bstart:457236 Bend:457257 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135163, end:135184) B=15068 nt (start:2513, end:2534) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16810, end:16789) A=1227811 nt (start:7005, end:6984) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGAGGAAGACGGCGGTGAGGA - TCCAAAAGAAGACATTAGCCT) on contig 37 (853709 nt) Astart:838984 Aend:838963 Bstart:823479 Bend:823500 CALCULATED DISTANCE APART: 15505 Pairs unsatisfied in distance within a contig. Pair (TACGGAACGAGGATATAAAAT - CCTATTCCTACTCATCCCTGG) on contig 30 (1050452 nt) Astart:649839 Aend:649860 Bstart:665605 Bend:665584 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#34 -> -3900848 <- tig#r.11, A=1705564 nt (start:54482, end:54503) B=4628067 nt (start:2358301, end:2358322) CALCULATED DISTANCE APART: -3900848 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CGGGCTGAGGTTGATTCATGA - CCTTTTCACATATACAACAAC) on contig 14 (2271162 nt) Astart:1848931 Aend:1848910 Bstart:2003819 Bend:2003798 Pairs unsatisfied in pairing logic within a contig. Pair (ATTGTACTATAAAAAGAAACA - TTCTCCAAGGAGAGTTTATGA) on contig 15 (3712591 nt) Astart:1717968 Aend:1717989 Bstart:1730050 Bend:1730071 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728633, end:728654) A=1096 nt (start:718, end:697) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATACGGCCATGCATCAAATCT - TCTATGTATCGCCGAGTCCAT) on contig 19 (3531543 nt) Astart:3059511 Aend:3059490 Bstart:3049212 Bend:3049191 Pairs unsatisfied in pairing logic within a contig. Pair (GACGTAGGTAACTCGGCTACT - TGATGTCAATAATGCTCAATT) on contig 15 (3712591 nt) Astart:1716943 Aend:1716964 Bstart:1731075 Bend:1731096 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -40662 <- tig#443, A=736718 nt (start:676641, end:676662) B=1213 nt (start:585, end:564) CALCULATED DISTANCE APART: -40662 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#92 -> -2121782 <- tig#16, A=101136 nt (start:2778, end:2799) B=2098954 nt (start:2043424, end:2043403) CALCULATED DISTANCE APART: -2121782 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AAGCTAGCTAGTTGAGAATTG - TCATTCCTACCTTTCCAAACA) on contig 19 (3531543 nt) Astart:3059846 Aend:3059825 Bstart:3048877 Bend:3048856 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#136 -> -33122 <- tig#143, A=49085 nt (start:10230, end:10251) B=24293 nt (start:14267, end:14246) CALCULATED DISTANCE APART: -33122 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#119 -> -7707 <- tig#r.49, A=46878 nt (start:32095, end:32116) B=399963 nt (start:387039, end:387060) CALCULATED DISTANCE APART: -7707 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CACTCCTAAACTAAATAATCA - ATACGATTACTATAAACTGTT) on contig 7 (3534247 nt) Astart:2257017 Aend:2256996 Bstart:2237760 Bend:2237739 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136683, end:136704) B=15068 nt (start:993, end:1014) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260507, end:2260528) B=356404 nt (start:342717, end:342738) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -40662 <- tig#443, A=736718 nt (start:676891, end:676912) B=1213 nt (start:835, end:814) CALCULATED DISTANCE APART: -40662 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGTTTCAGAGCTAATTCACAA - CTGTTGAAACTATTAGAGGAT) on contig 2 (5014909 nt) Astart:1268786 Aend:1268807 Bstart:1283448 Bend:1283427 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.48 -> -3108448 <- tig#12, B=487359 nt (start:404009, end:403988) A=2766197 nt (start:2724439, end:2724418) CALCULATED DISTANCE APART: -3108448 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:1710, end:1731) A=258385 nt (start:246, end:225) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16215, end:16194) A=1227811 nt (start:7600, end:7579) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -2461734 <- tig#10, A=736718 nt (start:310693, end:310714) B=3047199 nt (start:2055709, end:2055688) CALCULATED DISTANCE APART: -2461734 < -2000 Pairs unsatisfied in distance within a contig. Pair (CAGTCAAAGCCGCGTAATCGG - ACGAACACTAGCCTCTTGCCT) on contig 1 (4853111 nt) Astart:346205 Aend:346226 Bstart:391482 Bend:391461 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728138, end:728159) A=1096 nt (start:223, end:202) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260387, end:2260408) B=356404 nt (start:342837, end:342858) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136178, end:136199) B=15068 nt (start:1498, end:1519) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.17 -> -4235404 <- tig#3, B=1959065 nt (start:1446476, end:1446455) A=3889482 nt (start:2808928, end:2808907) CALCULATED DISTANCE APART: -4235404 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#34 -> -2516970 <- tig#24, B=1705564 nt (start:45692, end:45713) A=1307561 nt (start:877098, end:877077) CALCULATED DISTANCE APART: -2516970 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#265 -> -3126344 <- tig#4, A=1946 nt (start:1536, end:1557) B=3837743 nt (start:3145934, end:3145913) CALCULATED DISTANCE APART: -3126344 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3583 <- tig#26, B=1171658 nt (start:1171243, end:1171264) A=1332708 nt (start:23168, end:23147) CALCULATED DISTANCE APART: -3583 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATTAGTACAAGTCATGTTTTT - GCATGCAATAATAATGTGAAA) on contig 19 (3531543 nt) Astart:3058418 Aend:3058397 Bstart:3050302 Bend:3050281 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#433 -> -944078 <- tig#r.29, A=1238 nt (start:566, end:587) B=1463708 nt (start:500302, end:500323) CALCULATED DISTANCE APART: -944078 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATGTGATGTGAAGGTGAGTAT - CCTAGACGAAATCTCTAAACT) on contig 41 (667251 nt) Astart:88848 Aend:88827 Bstart:76168 Bend:76189 CALCULATED DISTANCE APART: 12680 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#47 -> -466562 <- tig#91, A=471458 nt (start:1596, end:1617) B=101959 nt (start:16700, end:16679) CALCULATED DISTANCE APART: -466562 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GACTTTGTATTTGGAAGTTGT - AAAAAATCAAAATTTGTAAAG) on contig 19 (3531543 nt) Astart:3059936 Aend:3059915 Bstart:3048787 Bend:3048766 Pairs unsatisfied in pairing logic within a contig. Pair (TAATTATGAGTAAGTAAATGT - ATTCATTGATATATGTAAATA) on contig 15 (3712591 nt) Astart:1717178 Aend:1717199 Bstart:1730840 Bend:1730861 Pairs unsatisfied in distance within a contig. Pair (ATTTAATTTTTTTGGGGAAAA - AATCTTGGATACAATGGAGAC) on contig 6 (6870868 nt) Astart:1138034 Aend:1138013 Bstart:1129607 Bend:1129628 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig. Pair (TATGACTTTTATCCTCTTACA - ACTTTTGTCATTTCAATGATC) on contig 7 (3534247 nt) Astart:3140302 Aend:3140281 Bstart:3131762 Bend:3131783 CALCULATED DISTANCE APART: 8540 Pairs unsatisfied in distance within a contig. Pair (TATTGTTTCTTGAACGTTGAC - CTAGCTACCAAAGTTCTCCAC) on contig 2 (5014909 nt) Astart:1269186 Aend:1269207 Bstart:1283848 Bend:1283827 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in pairing logic within a contig. Pair (TAATCAAGTATTTGTTTCAAT - AAGTTATCAGACTCGTAACCA) on contig 19 (3531543 nt) Astart:3058568 Aend:3058547 Bstart:3050152 Bend:3050131 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#11 -> -4352558 <- tig#79, A=4628067 nt (start:266697, end:266718) B=136600 nt (start:11188, end:11167) CALCULATED DISTANCE APART: -4352558 < -2000 Pairs unsatisfied in distance within a contig. Pair (GACAGTCAACAGATGCATAGT - TCTTCTCAGCATCTTTACCAT) on contig 14 (2271162 nt) Astart:2001253 Aend:2001232 Bstart:1734486 Bend:1734507 CALCULATED DISTANCE APART: 266767 Pairs unsatisfied in distance within a contig. Pair (ATAATGTTTAATAGTGTATAT - CCAAACCACTTCATAATAATA) on contig 34 (1705564 nt) Astart:679414 Aend:679393 Bstart:664451 Bend:664472 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig. Pair (GATGAAGTATGTGTGTGTTGG - ACTAGTATACAAGAATAATGT) on contig 5 (3689108 nt) Astart:1178617 Aend:1178596 Bstart:1163483 Bend:1163504 CALCULATED DISTANCE APART: 15134 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#125 -> -34980 <- tig#r.7, A=54013 nt (start:9023, end:9044) B=3534247 nt (start:3524257, end:3524278) CALCULATED DISTANCE APART: -34980 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#305 -> -2202335 <- tig#r.19, A=1638 nt (start:17, end:38) B=3531543 nt (start:1310829, end:1310850) CALCULATED DISTANCE APART: -2202335 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#34 -> -332088 <- tig#53, A=1705564 nt (start:1679277, end:1679298) B=354284 nt (start:325801, end:325780) CALCULATED DISTANCE APART: -332088 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#74 -> -258389 <- tig#56, A=238371 nt (start:58937, end:58958) B=262460 nt (start:98955, end:98934) CALCULATED DISTANCE APART: -258389 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#48 -> -3151847 <- tig#12, B=487359 nt (start:40436, end:40457) A=2766197 nt (start:2724924, end:2724903) CALCULATED DISTANCE APART: -3151847 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#46 -> -3500669 <- tig#6, A=577887 nt (start:566855, end:566876) B=6870868 nt (start:3509637, end:3509616) CALCULATED DISTANCE APART: -3500669 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGATCTTGACAACAACCGTTT - TGTGAACTATTACCACAACTT) on contig 2 (5014909 nt) Astart:1269101 Aend:1269122 Bstart:1283763 Bend:1283742 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#119 -> -7707 <- tig#r.49, A=46878 nt (start:32100, end:32121) B=399963 nt (start:387034, end:387055) CALCULATED DISTANCE APART: -7707 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16250, end:16229) A=1227811 nt (start:7565, end:7544) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATCTAGTAGTTTGCAATATAT - GTCGAGGATCCACGTAATATA) on contig 19 (3531543 nt) Astart:3060396 Aend:3060375 Bstart:3048327 Bend:3048306 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136743, end:136764) B=15068 nt (start:933, end:954) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (AGGTAACTCGGCTACTCCTAA - ATGGATGATGTCAATAATGCT) on contig 15 (3712591 nt) Astart:1716948 Aend:1716969 Bstart:1731070 Bend:1731091 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#39 -> -500696 <- tig#r.30, A=736718 nt (start:679356, end:679377) B=1050452 nt (start:587118, end:587139) CALCULATED DISTANCE APART: -500696 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#279 -> -10279 <- tig#r.53, A=1777 nt (start:9, end:30) B=354284 nt (start:325773, end:325794) CALCULATED DISTANCE APART: -10279 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#127 -> -717436 <- tig#r.33, A=80830 nt (start:20221, end:20242) B=1290487 nt (start:613660, end:613681) CALCULATED DISTANCE APART: -717436 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219226, end:4219205) A=2598 nt (start:2395, end:2374) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#53 -> -214292 <- tig#6, A=354284 nt (start:134065, end:134086) B=6870868 nt (start:14073, end:14052) CALCULATED DISTANCE APART: -214292 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTTCTTAATGGAATCAAGATC - TAATTCAAAATACGATATGAT) on contig 15 (3712591 nt) Astart:1717743 Aend:1717764 Bstart:1730275 Bend:1730296 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33734, end:33713) A=855454 nt (start:18715, end:18694) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.257 -> -2902765 <- tig#8, B=1995 nt (start:1556, end:1535) A=5070776 nt (start:2921209, end:2921188) CALCULATED DISTANCE APART: -2902765 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.20 -> -2413469 <- tig#37, B=2328057 nt (start:2055375, end:2055354) A=853709 nt (start:378094, end:378073) CALCULATED DISTANCE APART: -2413469 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#81 -> -8591 <- tig#r.149, A=258617 nt (start:240664, end:240685) B=19725 nt (start:9087, end:9108) CALCULATED DISTANCE APART: -8591 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:1810, end:1831) A=258385 nt (start:346, end:325) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.6 -> -5416200 <- tig#35, B=6870868 nt (start:4671964, end:4671943) A=1135475 nt (start:764236, end:764215) CALCULATED DISTANCE APART: -5416200 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:136443, end:136464) B=15068 nt (start:1233, end:1254) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219141, end:4219120) A=2598 nt (start:2480, end:2459) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3583 <- tig#26, B=1171658 nt (start:1171368, end:1171389) A=1332708 nt (start:23293, end:23272) CALCULATED DISTANCE APART: -3583 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260437, end:2260458) B=356404 nt (start:342787, end:342808) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATCTTTGAGTTGATGAAGAAG - AAGGTGCAGCGCTTCTAAAGA) on contig 1 (4853111 nt) Astart:346845 Aend:346866 Bstart:392122 Bend:392101 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4186139, end:4186118) A=3712591 nt (start:422, end:401) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:1715, end:1736) A=258385 nt (start:251, end:230) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#16 -> -11560 <- tig#r.31, A=2098954 nt (start:2082842, end:2082863) B=976128 nt (start:960680, end:960701) CALCULATED DISTANCE APART: -11560 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460079, end:460058) A=1345436 nt (start:25581, end:25560) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135353, end:135374) B=15068 nt (start:2323, end:2344) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig. Pair (GAAGAAACTCAAATCCGATAT - AAGTCTTTTTGATTAAGAACA) on contig 5 (3689108 nt) Astart:1178527 Aend:1178506 Bstart:1163393 Bend:1163414 CALCULATED DISTANCE APART: 15134 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12441, end:12420) A=91302 nt (start:11752, end:11731) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -40662 <- tig#443, A=736718 nt (start:676896, end:676917) B=1213 nt (start:840, end:819) CALCULATED DISTANCE APART: -40662 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.17 -> -4235143 <- tig#3, B=1959065 nt (start:1446500, end:1446479) A=3889482 nt (start:2808643, end:2808622) CALCULATED DISTANCE APART: -4235143 < -2000 Pairs unsatisfied in distance within a contig. Pair (ATATCCATAAACACGTATACA - AAGTTAAATTAGCAATTTCCC) on contig 1 (4853111 nt) Astart:345731 Aend:345752 Bstart:390997 Bend:390976 CALCULATED DISTANCE APART: 45266 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#19 -> -3197072 <- tig#47, A=3531543 nt (start:470681, end:470702) B=471458 nt (start:156210, end:156189) CALCULATED DISTANCE APART: -3197072 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAGAAAGCTGTTGGTATCTTT - TAAAGAAAACGCGAGTTTTCT) on contig 1 (4853111 nt) Astart:346830 Aend:346851 Bstart:392107 Bend:392086 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.39 -> -441493 <- tig#441, B=736718 nt (start:461421, end:461400) A=1218 nt (start:72, end:51) CALCULATED DISTANCE APART: -441493 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.521 -> -111709 <- tig#63, B=1100 nt (start:677, end:656) A=274372 nt (start:131032, end:131011) CALCULATED DISTANCE APART: -111709 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12126, end:12105) A=91302 nt (start:12067, end:12046) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#320 -> -17793 <- tig#r.131, A=1552 nt (start:124, end:145) B=36503 nt (start:138, end:159) CALCULATED DISTANCE APART: -17793 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#320 -> -307223 <- tig#53, A=1552 nt (start:124, end:145) B=354284 nt (start:325795, end:325774) CALCULATED DISTANCE APART: -307223 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12366, end:12345) A=91302 nt (start:11827, end:11806) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#33 -> -492044 <- tig#32, A=1290487 nt (start:1235987, end:1236008) B=972151 nt (start:457544, end:457523) CALCULATED DISTANCE APART: -492044 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CAAATTCTTATACTCGATGGG - GTGCTAAGTTCACTCTGAAGA) on contig 4 (3837743 nt) Astart:2358451 Aend:2358472 Bstart:2359611 Bend:2359632 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12651, end:12630) A=91302 nt (start:11542, end:11521) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#33 -> -492044 <- tig#32, A=1290487 nt (start:1235917, end:1235938) B=972151 nt (start:457474, end:457453) CALCULATED DISTANCE APART: -492044 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16460, end:16439) A=1227811 nt (start:7355, end:7334) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260342, end:2260363) B=356404 nt (start:342882, end:342903) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#9 -> -3369808 <- tig#22, A=3747885 nt (start:358153, end:358174) B=1636463 nt (start:76, end:55) CALCULATED DISTANCE APART: -3369808 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16665, end:16644) A=1227811 nt (start:7150, end:7129) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135568, end:135589) B=15068 nt (start:2108, end:2129) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#305 -> -2202335 <- tig#r.19, A=1638 nt (start:97, end:118) B=3531543 nt (start:1310749, end:1310770) CALCULATED DISTANCE APART: -2202335 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#98 -> -18306 <- tig#153, B=88184 nt (start:68349, end:68370) A=19045 nt (start:18471, end:18450) CALCULATED DISTANCE APART: -18306 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#71 -> -145720 <- tig#122, A=271268 nt (start:121030, end:121051) B=43035 nt (start:15482, end:15461) CALCULATED DISTANCE APART: -145720 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTCAAAGCTAATAAAATTCAT - CTCATAACACTATATTCAAAA) on contig 60 (232804 nt) Astart:31332 Aend:31353 Bstart:57610 Bend:57589 CALCULATED DISTANCE APART: 26278 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17505, end:17484) A=1227811 nt (start:6310, end:6289) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260067, end:2260088) B=356404 nt (start:343157, end:343178) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.91 -> -51047 <- tig#31, B=101959 nt (start:15325, end:15304) A=976128 nt (start:55722, end:55701) CALCULATED DISTANCE APART: -51047 < -2000 Pairs unsatisfied in distance within a contig. Pair (CCACACTCCTCTGTACAACTG - TTTCTCTTTGGTGATTCTTCG) on contig 1 (4853111 nt) Astart:346320 Aend:346341 Bstart:391597 Bend:391576 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#13 -> -3265533 <- tig#5, B=2650694 nt (start:2066844, end:2066865) A=3689108 nt (start:2701683, end:2701662) CALCULATED DISTANCE APART: -3265533 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -4201 <- tig#r.96, A=262460 nt (start:244266, end:244287) B=91302 nt (start:85295, end:85316) CALCULATED DISTANCE APART: -4201 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#28 -> -3583 <- tig#26, B=1171658 nt (start:1171188, end:1171209) A=1332708 nt (start:23113, end:23092) CALCULATED DISTANCE APART: -3583 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728058, end:728079) A=1096 nt (start:143, end:122) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGGAAGATTTGTTGGAGCGGG - AGCAAGCTAATAAAGGGAAGC) on contig 30 (1050452 nt) Astart:649214 Aend:649235 Bstart:664980 Bend:664959 CALCULATED DISTANCE APART: 15766 Pairs unsatisfied in pairing logic within a contig. Pair (TGAGGTTGATTCATGACTCTT - CATCACCTTTTCACATATACA) on contig 14 (2271162 nt) Astart:1848926 Aend:1848905 Bstart:2003824 Bend:2003803 Pairs unsatisfied in distance within a contig. Pair (AAAACCCAGATATTTTCTTGG - TTTACTAGTCAAGTGTATTTC) on contig 6 (6870868 nt) Astart:1138009 Aend:1137988 Bstart:1129582 Bend:1129603 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#47 -> -314050 <- tig#6, A=471458 nt (start:149911, end:149932) B=6870868 nt (start:12503, end:12482) CALCULATED DISTANCE APART: -314050 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.38 -> -1310113 <- tig#33, B=1143067 nt (start:1039444, end:1039423) A=1290487 nt (start:290669, end:290648) CALCULATED DISTANCE APART: -1310113 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#120 -> -1341554 <- tig#29, B=44710 nt (start:43622, end:43643) A=1463708 nt (start:1360466, end:1360445) CALCULATED DISTANCE APART: -1341554 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.31 -> -57770 <- tig#75, B=976128 nt (start:57897, end:57876) A=373953 nt (start:19873, end:19852) CALCULATED DISTANCE APART: -57770 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:730607, end:730628) B=3531543 nt (start:3200181, end:3200160) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282132, end:282153) B=2196 nt (start:313, end:292) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728213, end:728234) A=1096 nt (start:298, end:277) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -1335763 <- tig#4, B=3747885 nt (start:2857172, end:2857193) A=3837743 nt (start:465050, end:465029) CALCULATED DISTANCE APART: -1335763 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#56 -> -532325 <- tig#5, A=262460 nt (start:70355, end:70376) B=3689108 nt (start:360220, end:360199) CALCULATED DISTANCE APART: -532325 < -2000 Pairs unsatisfied in distance within a contig. Pair (AGAAAAAACTAGAGAGTCAGT - TTTTTTCTCCAGTCACCCATC) on contig 27 (1227811 nt) Astart:434780 Aend:434801 Bstart:451033 Bend:451012 CALCULATED DISTANCE APART: 16253 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185649, end:4185628) A=3712591 nt (start:912, end:891) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#39 -> -2984839 <- tig#12, B=736718 nt (start:457368, end:457389) A=2766197 nt (start:2725489, end:2725468) CALCULATED DISTANCE APART: -2984839 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:460599, end:460578) A=1345436 nt (start:25061, end:25040) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -322558 <- tig#r.572, A=2650694 nt (start:2309005, end:2309026) B=1031 nt (start:162, end:183) CALCULATED DISTANCE APART: -322558 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -40662 <- tig#443, A=736718 nt (start:676911, end:676932) B=1213 nt (start:855, end:834) CALCULATED DISTANCE APART: -40662 < -2000 Pairs unsatisfied in distance within a contig. Pair (CATTTAAGCTTTAATAGAAAG - GAGAATGATGTTCATCAAGTG) on contig 37 (853709 nt) Astart:539017 Aend:539038 Bstart:551687 Bend:551666 CALCULATED DISTANCE APART: 12670 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#283 -> -3818458 <- tig#2, A=1768 nt (start:503, end:524) B=5014909 nt (start:3837193, end:3837172) CALCULATED DISTANCE APART: -3818458 < -2000 Pairs unsatisfied in distance within a contig. Pair (CATGATCTCATCGTTGAGGTT - CTAAGATATTAGCACCTTTCC) on contig 1 (4853111 nt) Astart:346575 Aend:346596 Bstart:391852 Bend:391831 CALCULATED DISTANCE APART: 45277 Pairs unsatisfied in distance within a contig. Pair (GACTTATATTGGTATTGAAAT - CAAAGTAGTCAGGCTTTAGCT) on contig 41 (667251 nt) Astart:88248 Aend:88227 Bstart:75568 Bend:75589 CALCULATED DISTANCE APART: 12680 Pairs unsatisfied in distance within a contig. Pair (AAACAGAATCGACGTAGCAGG - GCATATTGATTACTGTATTTG) on contig 5 (3689108 nt) Astart:1170202 Aend:1170223 Bstart:1185337 Bend:1185316 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.38 -> -1310007 <- tig#33, B=1143067 nt (start:1039094, end:1039073) A=1290487 nt (start:290913, end:290892) CALCULATED DISTANCE APART: -1310007 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#31 -> -921133 <- tig#r.134, A=976128 nt (start:42139, end:42160) B=33262 nt (start:26118, end:26139) CALCULATED DISTANCE APART: -921133 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.58 -> -1866109 <- tig#19, B=374416 nt (start:14101, end:14080) A=3531543 nt (start:1872008, end:1871987) CALCULATED DISTANCE APART: -1866109 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282602, end:282623) B=2196 nt (start:783, end:762) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CAGCGGAAGAGCTGATGATTT - AACAAATAGAACCATTAATAA) on contig 15 (3712591 nt) Astart:1718593 Aend:1718614 Bstart:1729425 Bend:1729446 Pairs unsatisfied in distance within a contig. Pair (ATATATATGACTTTTATCCTC - TGTCATTTCAATGATCTCAAT) on contig 7 (3534247 nt) Astart:3140307 Aend:3140286 Bstart:3131767 Bend:3131788 CALCULATED DISTANCE APART: 8540 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#54 -> -327960 <- tig#r.53, A=625914 nt (start:324322, end:324343) B=354284 nt (start:307916, end:307937) CALCULATED DISTANCE APART: -327960 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.148 -> -32449 <- tig#36, B=35830 nt (start:33899, end:33878) A=855454 nt (start:18550, end:18529) CALCULATED DISTANCE APART: -32449 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#19 -> -1649636 <- tig#31, A=3531543 nt (start:1878162, end:1878183) B=976128 nt (start:16255, end:16234) CALCULATED DISTANCE APART: -1649636 < -2000 Pairs unsatisfied in distance within a contig. Pair (GCTCTTGATAAAGCTGTCACG - AATTGAGGATTTTAAATGAAC) on contig 5 (3689108 nt) Astart:1171722 Aend:1171743 Bstart:1186858 Bend:1186837 CALCULATED DISTANCE APART: 15136 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#46 -> -3144173 <- tig#12, B=577887 nt (start:138573, end:138594) A=2766197 nt (start:2724859, end:2724838) CALCULATED DISTANCE APART: -3144173 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.25 -> -1123940 <- tig#98, B=1290536 nt (start:1122026, end:1122005) A=88184 nt (start:21914, end:21893) CALCULATED DISTANCE APART: -1123940 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219486, end:4219465) A=2598 nt (start:2135, end:2114) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -1335763 <- tig#4, B=3747885 nt (start:2857687, end:2857708) A=3837743 nt (start:465565, end:465544) CALCULATED DISTANCE APART: -1335763 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.1 -> -4149265 <- tig#3, B=4853111 nt (start:2953715, end:2953694) A=3889482 nt (start:1215550, end:1215529) CALCULATED DISTANCE APART: -4149265 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282682, end:282703) B=2196 nt (start:863, end:842) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:135468, end:135489) B=15068 nt (start:2208, end:2229) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#87 -> -24610 <- tig#r.7, A=109083 nt (start:73628, end:73649) B=3534247 nt (start:3525092, end:3525113) CALCULATED DISTANCE APART: -24610 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.28 -> -4041595 <- tig#8, B=1171658 nt (start:689971, end:689950) A=5070776 nt (start:3371624, end:3371603) CALCULATED DISTANCE APART: -4041595 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -1168778 <- tig#384, A=5070776 nt (start:3882355, end:3882376) B=1359 nt (start:357, end:336) CALCULATED DISTANCE APART: -1168778 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#35 -> -2483933 <- tig#r.15, A=1135475 nt (start:290406, end:290427) B=3712591 nt (start:2053727, end:2053748) CALCULATED DISTANCE APART: -2483933 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#129 -> -1698873 <- tig#34, B=39603 nt (start:29, end:50) A=1705564 nt (start:1679299, end:1679278) CALCULATED DISTANCE APART: -1698873 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.6 -> -8213068 <- tig#34, B=6870868 nt (start:6553769, end:6553748) A=1705564 nt (start:1679299, end:1679278) CALCULATED DISTANCE APART: -8213068 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.167 -> -1669514 <- tig#34, B=25236 nt (start:10215, end:10194) A=1705564 nt (start:1679299, end:1679278) CALCULATED DISTANCE APART: -1669514 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GTTAAATACATACTCCAACGA - GCGGTCGAAAAACTTGTAGTA) on contig 19 (3531543 nt) Astart:3058383 Aend:3058362 Bstart:3050337 Bend:3050316 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#41 -> -651287 <- tig#17, B=667251 nt (start:486708, end:486729) A=1959065 nt (start:490744, end:490723) CALCULATED DISTANCE APART: -651287 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728453, end:728474) A=1096 nt (start:538, end:517) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459364, end:459343) A=1345436 nt (start:26296, end:26275) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#37 -> -738300 <- tig#r.53, A=853709 nt (start:108234, end:108255) B=354284 nt (start:341459, end:341480) CALCULATED DISTANCE APART: -738300 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728308, end:728329) A=1096 nt (start:393, end:372) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2261077, end:2261098) B=356404 nt (start:342147, end:342168) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#54 -> -641862 <- tig#103, B=625914 nt (start:162539, end:162560) A=211876 nt (start:198487, end:198466) CALCULATED DISTANCE APART: -641862 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (GACTTGTATGCAGACAGAGAA - CACTTCAACGACAAACCCCAA) on contig 14 (2271162 nt) Astart:656948 Aend:656969 Bstart:457211 Bend:457232 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.403 -> -2330792 <- tig#13, B=1321 nt (start:315, end:294) A=2650694 nt (start:2350477, end:2350456) CALCULATED DISTANCE APART: -2330792 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4185704, end:4185683) A=3712591 nt (start:857, end:836) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#11 -> -4257877 <- tig#r.48, A=4628067 nt (start:450417, end:450438) B=487359 nt (start:387132, end:387153) CALCULATED DISTANCE APART: -4257877 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#56 -> -3661461 <- tig#r.3, A=262460 nt (start:68605, end:68626) B=3889482 nt (start:401876, end:401897) CALCULATED DISTANCE APART: -3661461 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#22 -> -6369340 <- tig#6, B=1636463 nt (start:14747, end:14768) A=6870868 nt (start:4767624, end:4767603) CALCULATED DISTANCE APART: -6369340 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ACTAAGAAAGACAAATCGAAA - AACATGATTTGGGTGTTAAGC) on contig 14 (2271162 nt) Astart:658381 Aend:658360 Bstart:495530 Bend:495509 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17465, end:17444) A=1227811 nt (start:6350, end:6329) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:282907, end:282928) B=2196 nt (start:1088, end:1067) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#53 -> -108796 <- tig#r.85, A=354284 nt (start:342235, end:342256) B=121353 nt (start:4606, end:4627) CALCULATED DISTANCE APART: -108796 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.20 -> -2413469 <- tig#37, B=2328057 nt (start:2055440, end:2055419) A=853709 nt (start:378029, end:378008) CALCULATED DISTANCE APART: -2413469 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#25 -> -988717 <- tig#249, A=1290536 nt (start:283052, end:283073) B=2196 nt (start:1233, end:1212) CALCULATED DISTANCE APART: -988717 < -2000 Pairs unsatisfied in distance within a contig. Pair (GTCTTATTTTTTTTTGTTTTC - GAAATGTATAGAGAGGTAAAG) on contig 14 (2271162 nt) Astart:1979306 Aend:1979327 Bstart:2003314 Bend:2003293 CALCULATED DISTANCE APART: 24008 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17105, end:17084) A=1227811 nt (start:6710, end:6689) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -621133 <- tig#r.66, A=2766197 nt (start:2129718, end:2129739) B=201913 nt (start:197259, end:197280) CALCULATED DISTANCE APART: -621133 < -2000 Pairs unsatisfied in distance within a contig. Pair (GAAATGTCACACTCTTCCCGA - TTCAGCAGTTGATCACAATGT) on contig 46 (577887 nt) Astart:183300 Aend:183321 Bstart:200750 Bend:200729 CALCULATED DISTANCE APART: 17450 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2259382, end:2259403) B=356404 nt (start:343842, end:343863) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#9 -> -1335763 <- tig#4, B=3747885 nt (start:2857537, end:2857558) A=3837743 nt (start:465415, end:465394) CALCULATED DISTANCE APART: -1335763 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (CAACAGCCACCGGCCTCTTTC - TTCTTAACTTCCACACTTGTT) on contig 19 (3531543 nt) Astart:3060176 Aend:3060155 Bstart:3048547 Bend:3048526 Pairs unsatisfied in pairing logic within a contig. Pair (TACGATTAAACGTTATAAAAT - TTGTACATTAAATTTCCAAGA) on contig 19 (3531543 nt) Astart:3060431 Aend:3060410 Bstart:3048292 Bend:3048271 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#139 -> -6232 <- tig#57, B=27696 nt (start:2565, end:2586) A=258385 nt (start:1101, end:1080) CALCULATED DISTANCE APART: -6232 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.155 -> -199872 <- tig#62, B=18420 nt (start:16196, end:16175) A=354710 nt (start:203676, end:203655) CALCULATED DISTANCE APART: -199872 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.12 -> -5702562 <- tig#7, B=2766197 nt (start:2222256, end:2222235) A=3534247 nt (start:3500306, end:3500285) CALCULATED DISTANCE APART: -5702562 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#52 -> -356009 <- tig#3, B=356404 nt (start:117, end:138) A=3889482 nt (start:19722, end:19701) CALCULATED DISTANCE APART: -356009 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATGATGATACAACCTTTGTTT - AATGGTAAATAGATTTTTAAG) on contig 15 (3712591 nt) Astart:1717583 Aend:1717604 Bstart:1730435 Bend:1730456 Pairs unsatisfied in pairing logic within a contig. Pair (AATCACTATGTCCATAATCTT - TACGATCTAACCCACAATGGA) on contig 19 (3531543 nt) Astart:3060081 Aend:3060060 Bstart:3048642 Bend:3048621 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#4 -> -2269449 <- tig#9, B=3837743 nt (start:1719842, end:1719863) A=3747885 nt (start:171548, end:171527) CALCULATED DISTANCE APART: -2269449 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#48 -> -1362255 <- tig#32, B=487359 nt (start:11611, end:11632) A=972151 nt (start:906507, end:906486) CALCULATED DISTANCE APART: -1362255 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TTTCTTGCTCTTTATATACAA - AGATTGGTGGGATATATTGGA) on contig 19 (3531543 nt) Astart:3059981 Aend:3059960 Bstart:3048742 Bend:3048721 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.48 -> -3108448 <- tig#12, B=487359 nt (start:404314, end:404293) A=2766197 nt (start:2724134, end:2724113) CALCULATED DISTANCE APART: -3108448 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.8 -> -4201621 <- tig#235, B=5070776 nt (start:4219416, end:4219395) A=2598 nt (start:2205, end:2184) CALCULATED DISTANCE APART: -4201621 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ACAAAAGCTTTAAACAGTTGT - AGGTTGCTTGCAAGTTGCACA) on contig 14 (2271162 nt) Astart:658431 Aend:658410 Bstart:495480 Bend:495459 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.93 -> -754845 <- tig#13, B=152036 nt (start:144484, end:144463) A=2650694 nt (start:630361, end:630340) CALCULATED DISTANCE APART: -754845 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.21 -> -713419 <- tig#43, B=1811326 nt (start:610531, end:610510) A=1235946 nt (start:122888, end:122867) CALCULATED DISTANCE APART: -713419 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#77 -> -17736 <- tig#r.162, A=160344 nt (start:134683, end:134704) B=15068 nt (start:2993, end:3014) CALCULATED DISTANCE APART: -17736 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#119 -> -7707 <- tig#r.49, A=46878 nt (start:32080, end:32101) B=399963 nt (start:387054, end:387075) CALCULATED DISTANCE APART: -7707 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#283 -> -3818458 <- tig#2, A=1768 nt (start:658, end:679) B=5014909 nt (start:3837348, end:3837327) CALCULATED DISTANCE APART: -3818458 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17345, end:17324) A=1227811 nt (start:6470, end:6449) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#27 -> -1270848 <- tig#32, B=1227811 nt (start:732607, end:732628) A=972151 nt (start:795644, end:795623) CALCULATED DISTANCE APART: -1270848 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#8 -> -1168778 <- tig#384, A=5070776 nt (start:3882145, end:3882166) B=1359 nt (start:147, end:126) CALCULATED DISTANCE APART: -1168778 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#167 -> -32393 <- tig#125, B=25236 nt (start:10193, end:10214) A=54013 nt (start:37350, end:37329) CALCULATED DISTANCE APART: -32393 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#12 -> -2463577 <- tig#29, A=2766197 nt (start:1237469, end:1237490) B=1463708 nt (start:954849, end:954828) CALCULATED DISTANCE APART: -2463577 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#39 -> -1263675 <- tig#29, A=736718 nt (start:407167, end:407188) B=1463708 nt (start:954124, end:954103) CALCULATED DISTANCE APART: -1263675 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#48 -> -585476 <- tig#46, A=487359 nt (start:38183, end:38204) B=577887 nt (start:156300, end:156279) CALCULATED DISTANCE APART: -585476 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#119 -> -7707 <- tig#r.49, A=46878 nt (start:31885, end:31906) B=399963 nt (start:387249, end:387270) CALCULATED DISTANCE APART: -7707 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.11 -> -465660 <- tig#23, B=4628067 nt (start:459844, end:459823) A=1345436 nt (start:25816, end:25795) CALCULATED DISTANCE APART: -465660 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#46 -> -3500669 <- tig#6, A=577887 nt (start:567065, end:567086) B=6870868 nt (start:3509847, end:3509826) CALCULATED DISTANCE APART: -3500669 < -2000 Pairs unsatisfied in distance within a contig. Pair (ACTGTTAAGTTAGATGCGGAT - TCTGCAACGCACACTCAAAGC) on contig 6 (6870868 nt) Astart:1138349 Aend:1138328 Bstart:1129922 Bend:1129943 CALCULATED DISTANCE APART: 8427 Pairs unsatisfied in distance within a contig. Pair (GTCAATATCCATCCAAACCAC - TCCTTTGGTTTTCTCATTTAA) on contig 34 (1705564 nt) Astart:679384 Aend:679363 Bstart:664421 Bend:664442 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10078, end:10057) A=2766197 nt (start:2151485, end:2151464) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#56 -> -1319384 <- tig#29, B=262460 nt (start:154760, end:154781) A=1463708 nt (start:1231684, end:1231663) CALCULATED DISTANCE APART: -1319384 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTGTGCAAATGGTGAAATTAG - ATTGTAACCTTCTCAACTGAC) on contig 2 (5014909 nt) Astart:1269471 Aend:1269492 Bstart:1284133 Bend:1284112 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#327 -> -113680 <- tig#51, B=1511 nt (start:1387, end:1408) A=875428 nt (start:133556, end:133535) CALCULATED DISTANCE APART: -113680 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.31 -> -1954811 <- tig#7, B=976128 nt (start:308335, end:308314) A=3534247 nt (start:1666476, end:1666455) CALCULATED DISTANCE APART: -1954811 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#14 -> -4342 <- tig#r.52, A=2271162 nt (start:2260097, end:2260118) B=356404 nt (start:343127, end:343148) CALCULATED DISTANCE APART: -4342 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.1 -> -4590180 <- tig#16, B=4853111 nt (start:3208337, end:3208316) A=2098954 nt (start:1401843, end:1401822) CALCULATED DISTANCE APART: -4590180 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:17255, end:17234) A=1227811 nt (start:6560, end:6539) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.403 -> -2330792 <- tig#13, B=1321 nt (start:555, end:534) A=2650694 nt (start:2350237, end:2350216) CALCULATED DISTANCE APART: -2330792 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#106 -> -1441975 <- tig#29, B=117163 nt (start:27331, end:27352) A=1463708 nt (start:1372143, end:1372122) CALCULATED DISTANCE APART: -1441975 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.60 -> -2141563 <- tig#12, B=232804 nt (start:10238, end:10217) A=2766197 nt (start:2151325, end:2151304) CALCULATED DISTANCE APART: -2141563 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#10 -> -2925315 <- tig#9, A=3047199 nt (start:251209, end:251230) B=3747885 nt (start:149325, end:149304) CALCULATED DISTANCE APART: -2925315 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (ATTAATTAATTACGCTTTAGC - ACTTTGATCAATGGATTCGGT) on contig 15 (3712591 nt) Astart:1717403 Aend:1717424 Bstart:1730615 Bend:1730636 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.56 -> -4193 <- tig#96, B=262460 nt (start:12446, end:12425) A=91302 nt (start:11747, end:11726) CALCULATED DISTANCE APART: -4193 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#34 -> -6341 <- tig#129, B=1705564 nt (start:1679274, end:1679295) A=39603 nt (start:51, end:30) CALCULATED DISTANCE APART: -6341 < -2000 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#34 -> -6336 <- tig#129, B=1705564 nt (start:1679279, end:1679300) A=39603 nt (start:51, end:30) CALCULATED DISTANCE APART: -6336 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#12 -> -621133 <- tig#r.66, A=2766197 nt (start:2129253, end:2129274) B=201913 nt (start:197724, end:197745) CALCULATED DISTANCE APART: -621133 < -2000 Pairs unsatisfied in distance within a contig. Pair (AAAATTATTGAATTTTTGTTA - ACAAATTCCTCAGCCATGGAA) on contig 34 (1705564 nt) Astart:679434 Aend:679413 Bstart:664471 Bend:664492 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#35 -> -387560 <- tig#526, B=1135475 nt (start:728513, end:728534) A=1096 nt (start:598, end:577) CALCULATED DISTANCE APART: -387560 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#305 -> -2202335 <- tig#r.19, A=1638 nt (start:277, end:298) B=3531543 nt (start:1310569, end:1310590) CALCULATED DISTANCE APART: -2202335 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#13 -> -322558 <- tig#r.572, A=2650694 nt (start:2308560, end:2308581) B=1031 nt (start:607, end:628) CALCULATED DISTANCE APART: -322558 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TACAAGTCATGTTTTTATAAC - CAAAAGCATGCAATAATAATG) on contig 19 (3531543 nt) Astart:3058413 Aend:3058392 Bstart:3050307 Bend:3050286 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#24 -> -3757135 <- tig#19, A=1307561 nt (start:729847, end:729868) B=3531543 nt (start:3199421, end:3199400) CALCULATED DISTANCE APART: -3757135 < -2000 Pairs unsatisfied in distance within a contig. Pair (TATTGAATTTTTGTTATAATG - ATAATACAAATTCCTCAGCCA) on contig 34 (1705564 nt) Astart:679429 Aend:679408 Bstart:664466 Bend:664487 CALCULATED DISTANCE APART: 14963 Pairs unsatisfied in pairing logic within a contig. Pair (AAGATATATTCTATGGTCTCC - TTAGTTGTTGTGTCCTAATGA) on contig 15 (3712591 nt) Astart:1717903 Aend:1717924 Bstart:1730115 Bend:1730136 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#7 -> -2355160 <- tig#r.32, A=3534247 nt (start:1604924, end:1604945) B=972151 nt (start:526314, end:526335) CALCULATED DISTANCE APART: -2355160 < -2000 Pairs unsatisfied in distance within a contig. Pair (TGTCATTTGTTTACAAATTGT - ATGGAGAGAACCTTGCTTGCT) on contig 5 (3689108 nt) Astart:1169547 Aend:1169568 Bstart:1184682 Bend:1184661 CALCULATED DISTANCE APART: 15135 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#132 -> -17440 <- tig#r.114, A=34686 nt (start:34647, end:34668) B=54818 nt (start:17417, end:17438) CALCULATED DISTANCE APART: -17440 < -2000 Pairs unsatisfied in distance within a contig. Pair (TATGAGTCTTTGGCTTTGTGT - ACACAAAGCCAAAGACTCATA) on contig 132 (34686 nt) Astart:34647 Aend:34668 Bstart:34668 Bend:34647 CALCULATED DISTANCE APART: 21 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#132 -> -6330 <- tig#r.34, A=34686 nt (start:34647, end:34668) B=1705564 nt (start:1679273, end:1679294) CALCULATED DISTANCE APART: -6330 < -2000 Pairs unsatisfied in distance within a contig pair. A-> <-rB WITH tig#132 -> -17441 <- tig#r.114, A=34686 nt (start:34647, end:34668) B=54818 nt (start:17416, end:17437) CALCULATED DISTANCE APART: -17441 < -2000 Pairs unsatisfied in distance within a contig. Pair (TACCTTTTGCTTCTCTGCCAA - AATTTCATGTTAAGTCAGTCT) on contig 15 (3712591 nt) Astart:3350380 Aend:3350401 Bstart:3375368 Bend:3375347 CALCULATED DISTANCE APART: 24988 Pairs unsatisfied in pairing logic within a contig. Pair (TGTCGGTGACTTTTATTTTTT - AATCCATTGCTCTCCAAAGAA) on contig 19 (3531543 nt) Astart:3059916 Aend:3059895 Bstart:3048807 Bend:3048786 Pairs unsatisfied in distance within a contig pair. A-> <-B WITH tig#47 -> -466530 <- tig#91, A=471458 nt (start:1773, end:1794) B=101959 nt (start:16845, end:16824) CALCULATED DISTANCE APART: -466530 < -2000 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.2 -> -4166561 <- tig#15, B=5014909 nt (start:4186014, end:4185993) A=3712591 nt (start:547, end:526) CALCULATED DISTANCE APART: -4166561 < -2000 Pairs unsatisfied in pairing logic within a contig. Pair (TGCATAGACCATTTTTGCATA - AAATCTTATAACTTACATGGA) on contig 19 (3531543 nt) Astart:3059273 Aend:3059252 Bstart:3049447 Bend:3049426 Pairs unsatisfied in distance within a contig pair. rB-> <-A WITH tig#r.9 -> -3815 <- tig#27, B=3747885 nt (start:16650, end:16629) A=1227811 nt (start:7165, end:7144) CALCULATED DISTANCE APART: -3815 < -2000 Pairs unsatisfied in distance within a contig. Pair (TTTGGTCATTATAGGCCTGCA - ACCCAGCGAGTGAAGAGAAGA) on contig 15 (3712591 nt) Astart:3349970 Aend:3349991 Bstart:3374958 Bend:3374937 CALCULATED DISTANCE APART: 24988 Pairs unsatisfied in distance within a contig. Pair (CATGATTACTCGGGTTGCATT - GGATTGTTTCTGGCAAAGACG) on contig 2 (5014909 nt) Astart:1268996 Aend:1269017 Bstart:1283658 Bend:1283637 CALCULATED DISTANCE APART: 14662 Pairs unsatisfied in distance within a contig. Pair (TATGGTTTTCGAAGTTAGTAA - TTATGTGACGAAGATAAATAT) on contig 109 (66564 nt) Astart:5819 Aend:5798 Bstart:183 Bend:204 CALCULATED DISTANCE APART: 5636 Pairs unsatisfied in pairing logic within a contig. Pair (GATGAAATTTAGAATTTTTAT - AAAACTATGCGACTAGAGAGT) on contig 19 (3531543 nt) Astart:3058708 Aend:3058687 Bstart:3050012 Bend:3049991 Pairs unsatisfied in distance within a contig. Pair (CATCCTGATGAAGTTTATGAT - GAGATAACCTAAAGAAAGAGA) on contig 6 (6870868 nt) Astart:1138699 Aend:1138678 Bstart:1130244 Bend:1130265 CALCULATED DISTANCE APART: 8455 Pairs unsatisfied in distance within a contig pair. B-> <-A WITH tig#55 -> -3562963 <- tig#7, B=265143 nt (start:206072, end:206093) A=3534247 nt (start:3523892, end:3523871) CALCULATED DISTANCE APART: -3562963 < -2000 ------------- Putative issues with contig pairing - Summary ---------------- Pair r11-f23 has 246 links and mean distance = -465660 Pair f77-r162 has 178 links and mean distance = -17736 Pair f14-r52 has 172 links and mean distance = -4342 Pair r9-f27 has 142 links and mean distance = -3815 Pair f35-f526 has 139 links and mean distance = -387560 Pair f25-f249 has 131 links and mean distance = -988717 Pair f139-f57 has 119 links and mean distance = -6302.70588235294 Pair f24-f19 has 115 links and mean distance = -3757135 Pair r2-f15 has 97 links and mean distance = -4166561 Pair r8-f235 has 77 links and mean distance = -4201621 Pair r56-f96 has 69 links and mean distance = -4193 Pair f16-r31 has 65 links and mean distance = -11560 Pair r148-f36 has 65 links and mean distance = -32449 Pair r60-f12 has 63 links and mean distance = -2141563 Pair f28-f26 has 62 links and mean distance = -3582.90322580645 Pair f39-f443 has 55 links and mean distance = -40662 Pair f120-f29 has 53 links and mean distance = -1341554.11320755 Pair f12-r66 has 51 links and mean distance = -621133 Pair f33-f32 has 51 links and mean distance = -492044 Pair f9-f4 has 51 links and mean distance = -1335738.23529412 Pair r257-f8 has 50 links and mean distance = -2902765 Pair f8-f384 has 49 links and mean distance = -1168778 Pair r403-f13 has 46 links and mean distance = -2330792 Pair f265-f4 has 45 links and mean distance = -3126344 Pair f433-r29 has 44 links and mean distance = -944078 Pair f53-f6 has 43 links and mean distance = -214290.209302326 Pair f305-r19 has 40 links and mean distance = -2202335 Pair f119-r49 has 37 links and mean distance = -7707 Pair f118-f97 has 35 links and mean distance = -33564.0285714286 Pair f13-r572 has 35 links and mean distance = -322558 Pair f283-f2 has 35 links and mean distance = -3818458 Pair f56-r96 has 35 links and mean distance = -4201 Pair f26-f95 has 31 links and mean distance = -90650 Pair r38-f33 has 28 links and mean distance = -1309994.35714286 Pair f48-f12 has 25 links and mean distance = -3151841.8 Pair f22-f6 has 24 links and mean distance = -6369358 Pair r1-f16 has 24 links and mean distance = -4571834.04166667 Pair f64-f109 has 23 links and mean distance = -208648.956521739 Pair r42-f20 has 22 links and mean distance = -1433157 Pair f25-f2 has 22 links and mean distance = -639215.181818182 Pair f74-f56 has 22 links and mean distance = -258312.863636364 Pair f7-f36 has 21 links and mean distance = -3853079 Pair f77-f99 has 21 links and mean distance = -122338 Pair r101-f107 has 21 links and mean distance = -46836.8571428571 Pair f52-f3 has 20 links and mean distance = -355851 Pair f56-r3 has 20 links and mean distance = -3661469.95 Pair f34-f79 has 20 links and mean distance = -1107934.6 Pair f47-f6 has 19 links and mean distance = -296488.947368421 Pair f12-f56 has 19 links and mean distance = -245463.684210526 Pair f14-f43 has 19 links and mean distance = -765454.421052632 Pair f46-f12 has 19 links and mean distance = -3144173.26315789 Pair f127-f17 has 18 links and mean distance = -57440 Pair f81-r7 has 18 links and mean distance = -2918948.55555556 Pair r6-f35 has 18 links and mean distance = -5416204 Pair f9-f69 has 17 links and mean distance = -2729017.29411765 Pair r409-f23 has 17 links and mean distance = -1019852 Pair f19-f31 has 17 links and mean distance = -1649636 Pair f6-f1 has 16 links and mean distance = -3712398 Pair f10-f9 has 16 links and mean distance = -2925312 Pair f47-r69 has 16 links and mean distance = -583213 Pair r47-f2 has 16 links and mean distance = -199638.3125 Pair r48-f12 has 15 links and mean distance = -3108447.53333333 Pair f9-f22 has 15 links and mean distance = -3369808 Pair f11-f29 has 15 links and mean distance = -4878208.66666667 Pair r58-f19 has 15 links and mean distance = -1866109 Pair f38-f78 has 14 links and mean distance = -1093431.78571429 Pair f57-f7 has 14 links and mean distance = -3231864 Pair f92-f16 has 14 links and mean distance = -2121587.21428571 Pair f39-r30 has 14 links and mean distance = -500700.571428571 Pair f34-r65 has 14 links and mean distance = -1056138.14285714 Pair r91-f31 has 14 links and mean distance = -51324.2142857143 Pair f37-r53 has 14 links and mean distance = -738472.357142857 Pair r38-f29 has 13 links and mean distance = -1426764.46153846 Pair f3-f27 has 13 links and mean distance = -3618470 Pair r28-f8 has 13 links and mean distance = -4041595 Pair f57-r11 has 13 links and mean distance = -4506482 Pair f53-f75 has 13 links and mean distance = -314811.769230769 Pair r15-f1 has 12 links and mean distance = -3863647 Pair f52-f1 has 12 links and mean distance = -354059 Pair r74-f17 has 12 links and mean distance = -1813132.75 Pair f49-r43 has 12 links and mean distance = -1152645 Pair f48-f46 has 12 links and mean distance = -585460.25 Pair f103-r48 has 12 links and mean distance = -259856 Pair f6-f91 has 12 links and mean distance = -40161.9166666667 Pair f48-f51 has 12 links and mean distance = -156024.333333333 Pair r328-f102 has 12 links and mean distance = -54701 Pair f79-r2 has 12 links and mean distance = -620819.75 Pair f46-f6 has 11 links and mean distance = -3500667.54545455 Pair r35-f2 has 11 links and mean distance = -676591 Pair f19-f47 has 11 links and mean distance = -3134532.90909091 Pair r46-f51 has 11 links and mean distance = -213072 Pair r34-f93 has 11 links and mean distance = -1666888.81818182 Pair f127-r33 has 10 links and mean distance = -717436 Pair f10-f103 has 10 links and mean distance = -2964285.4 Pair f34-r11 has 10 links and mean distance = -3900848 Pair f37-f25 has 10 links and mean distance = -1821163 Pair f9-r5 has 10 links and mean distance = -6907523.4 Pair f590-r34 has 10 links and mean distance = -1631326 Pair f54-r53 has 10 links and mean distance = -328021.6 Pair f3-r56 has 10 links and mean distance = -3661468.5 Pair f5-f7 has 10 links and mean distance = -5341098.9 Pair f39-f12 has 9 links and mean distance = -2984839 Pair f12-f557 has 9 links and mean distance = -167604 Pair f46-r48 has 9 links and mean distance = -523096.111111111 Pair f51-f79 has 9 links and mean distance = -548585.333333333 Pair f1-r10 has 9 links and mean distance = -4220727 Pair f53-f2 has 9 links and mean distance = -24523.7777777778 Pair r16-f291 has 9 links and mean distance = -2024025 Pair f74-r47 has 9 links and mean distance = -453293 Pair r31-f98 has 9 links and mean distance = -71285.6666666667 Pair r29-f12 has 9 links and mean distance = -1051281.77777778 Pair r20-f37 has 9 links and mean distance = -2413469 Pair f11-r19 has 9 links and mean distance = -5298482 Pair f43-f73 has 8 links and mean distance = -1009140.875 Pair f67-f51 has 8 links and mean distance = -163343 Pair f34-r132 has 8 links and mean distance = -9814.5 Pair r115-f9 has 8 links and mean distance = -3755846 Pair f13-r4 has 8 links and mean distance = -1443756 Pair f16-f270 has 8 links and mean distance = -1845669 Pair f22-f20 has 8 links and mean distance = -1615678 Pair f19-f6 has 8 links and mean distance = -9026440.125 Pair f56-f29 has 8 links and mean distance = -1319199.25 Pair f39-f29 has 8 links and mean distance = -1263666.5 Pair f75-f19 has 8 links and mean distance = -1731911.125 Pair f47-f53 has 8 links and mean distance = -347209.625 Pair f31-f41 has 8 links and mean distance = -665687.375 Pair f39-f46 has 8 links and mean distance = -418494 Pair r521-f63 has 8 links and mean distance = -111708.5 Pair f15-f6 has 7 links and mean distance = -8116131 Pair f27-f14 has 7 links and mean distance = -2275083.14285714 Pair f54-f30 has 7 links and mean distance = -868454.142857143 Pair f39-r48 has 7 links and mean distance = -357400.857142857 Pair r11-f2 has 7 links and mean distance = -7514397 Pair f103-f521 has 7 links and mean distance = -188044 Pair f34-f129 has 7 links and mean distance = -12462.4285714286 Pair r17-f3 has 7 links and mean distance = -4235329.42857143 Pair f148-r36 has 7 links and mean distance = -836233.285714286 Pair f101-f12 has 7 links and mean distance = -2656718 Pair f84-f34 has 7 links and mean distance = -1659582.14285714 Pair f42-r43 has 7 links and mean distance = -1103009.28571429 Pair f125-r7 has 6 links and mean distance = -34981.5 Pair r17-f74 has 6 links and mean distance = -1813111.66666667 Pair r29-f35 has 6 links and mean distance = -1609390.16666667 Pair f175-f3 has 6 links and mean distance = -2741574 Pair f29-f28 has 6 links and mean distance = -579824 Pair f10-f45 has 6 links and mean distance = -2837213 Pair f36-f31 has 6 links and mean distance = -890612.333333333 Pair f40-r79 has 6 links and mean distance = -506904 Pair f207-f19 has 6 links and mean distance = -1387873 Pair f2-f25 has 6 links and mean distance = -6085454 Pair f28-f475 has 6 links and mean distance = -913193 Pair f34-f53 has 6 links and mean distance = -332085.666666667 Pair f103-f48 has 6 links and mean distance = -216461 Pair f453-f68 has 6 links and mean distance = -16426 Pair r459-f53 has 6 links and mean distance = -147882 Pair f4-f9 has 5 links and mean distance = -2656021.8 Pair r139-f109 has 5 links and mean distance = -18912.6 Pair f31-r134 has 5 links and mean distance = -921133 Pair f37-r2 has 5 links and mean distance = -4025289.8 Pair f173-f6 has 5 links and mean distance = -6636294 Pair f11-r48 has 5 links and mean distance = -4257877 Pair f56-f5 has 5 links and mean distance = -532315 Pair f7-r32 has 5 links and mean distance = -2845310.8 Pair r155-f46 has 5 links and mean distance = -75138 Pair f19-r54 has 5 links and mean distance = -3620477 Pair f8-f4 has 5 links and mean distance = -4816788.8 Pair f342-f43 has 5 links and mean distance = -576943.4 Pair r32-f17 has 5 links and mean distance = -889372 Pair f148-f15 has 5 links and mean distance = -1869235 Pair f84-f53 has 5 links and mean distance = -306254.2 Pair f423-f34 has 5 links and mean distance = -926237 Pair f19-r72 has 5 links and mean distance = -3044633.2 Pair f11-f79 has 5 links and mean distance = -4370061.8 Pair f129-f34 has 5 links and mean distance = -1691074.6 Pair f92-r139 has 5 links and mean distance = -6676 Pair f9-r107 has 5 links and mean distance = -3401519.6 Pair f86-f17 has 5 links and mean distance = -735496 Pair f95-f49 has 5 links and mean distance = -24212.8 Pair f34-f31 has 5 links and mean distance = -2271847.8 Pair r54-f53 has 5 links and mean distance = -242536.8 Pair r364-f98 has 4 links and mean distance = -57406 Pair f19-r2 has 4 links and mean distance = -4017121.75 Pair f147-f6 has 4 links and mean distance = -2122509 Pair f47-f91 has 4 links and mean distance = -466572 Pair f51-r54 has 4 links and mean distance = -623213 Pair f81-f74 has 4 links and mean distance = -138141.75 Pair r12-f7 has 4 links and mean distance = -5702564.75 Pair f98-f161 has 4 links and mean distance = -8012 Pair f4-f16 has 4 links and mean distance = -3798684.5 Pair f4-f6 has 4 links and mean distance = -5078111.25 Pair f86-r5 has 4 links and mean distance = -1157724 Pair f7-f65 has 4 links and mean distance = -189846.5 Pair f39-f10 has 4 links and mean distance = -2461734 Pair f43-f53 has 4 links and mean distance = -460937 Pair r6-f25 has 4 links and mean distance = -1021234 Pair f106-f29 has 4 links and mean distance = -1441975 Pair f36-f37 has 4 links and mean distance = -741896 Pair f13-f5 has 4 links and mean distance = -3265550 Pair f58-f94 has 4 links and mean distance = -329129 Pair f67-f134 has 4 links and mean distance = -23669 Pair f36-f94 has 4 links and mean distance = -64204 Pair f95-f54 has 4 links and mean distance = -17268 Pair f54-f49 has 4 links and mean distance = -612717.5 Pair f7-f74 has 4 links and mean distance = -51464.5 Pair f64-r139 has 4 links and mean distance = -218030 Pair r2-f6 has 4 links and mean distance = -6170543 Pair f132-r114 has 4 links and mean distance = -17441 Pair r25-f38 has 4 links and mean distance = -1385598 Pair f34-r90 has 4 links and mean distance = -819923.25 Pair f48-r65 has 4 links and mean distance = -127298.5 Pair f129-f167 has 4 links and mean distance = -28875.75 Pair f40-f7 has 4 links and mean distance = -2348094 Pair f28-f7 has 4 links and mean distance = -710627.75 Pair r25-f98 has 4 links and mean distance = -1123940 Pair r86-f43 has 4 links and mean distance = -592847 Pair f103-r40 has 4 links and mean distance = -852675 Pair f38-f35 has 4 links and mean distance = -891893 Pair f63-f78 has 4 links and mean distance = -330553 Pair f48-r67 has 4 links and mean distance = -91507 Pair f9-f12 has 4 links and mean distance = -5394660.75 Pair f146-r139 has 4 links and mean distance = -25232.75 Pair f36-r41 has 4 links and mean distance = -228778 Pair f53-f84 has 4 links and mean distance = -204929.75 Pair r6-f49 has 4 links and mean distance = -4769472.25 Pair f34-f167 has 4 links and mean distance = -27728.25 Pair r4-f8 has 4 links and mean distance = -1331685 Pair f9-f58 has 4 links and mean distance = -3469176 Pair f25-r12 has 3 links and mean distance = -1269344 Pair f43-f67 has 3 links and mean distance = -1055896.33333333 Pair r155-f62 has 3 links and mean distance = -199872 Pair f47-f9 has 3 links and mean distance = -4008935 Pair f73-f43 has 3 links and mean distance = -397247 Pair r22-f55 has 3 links and mean distance = -475626.333333333 Pair f19-f74 has 3 links and mean distance = -2666311.33333333 Pair f7-f30 has 3 links and mean distance = -576331.333333333 Pair f6-f11 has 3 links and mean distance = -1309140 Pair f7-r10 has 3 links and mean distance = -4825866 Pair f414-f48 has 3 links and mean distance = -168814.666666667 Pair f19-r11 has 3 links and mean distance = -5298487.33333333 Pair r41-f17 has 3 links and mean distance = -954029.666666667 Pair f48-f387 has 3 links and mean distance = -455297.333333333 Pair f41-f17 has 3 links and mean distance = -651287 Pair f6-f95 has 3 links and mean 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