Sample mapped_passed duplicates_failed secondary_passed paired in sequencing_failed duplicates_passed read2_passed read1_failed read1_passed with mate mapped to a different chr_passed total_failed properly paired_passed_pct singletons_passed supplementary_passed singletons_passed_pct mapped_failed_pct mapped_passed_pct supplementary_failed with itself and mate mapped_failed mapped_failed total_passed properly paired_failed flagstat_total with mate mapped to a different chr (mapQ >= 5)_passed properly paired_failed_pct with mate mapped to a different chr (mapQ >= 5)_failed with itself and mate mapped_passed read2_failed with mate mapped to a different chr_failed properly paired_passed paired in sequencing_passed singletons_failed secondary_failed singletons_failed_pct merged_DeadCell 726656458 0 4806200 0 63205896 362883384 0 362883384 5757756 0 97.64 1981646 0 0.27 nan 99.46 0 0 0 730572968 0 730572968 2477994 nan 0 719868612 0 0 708654690 725766768 0 0 nan merged_DeadCell_1 359330832 0 2363546 0 32907074 179489922 0 179489922 2808910 0 97.67 915486 0 0.26 nan 99.44 0 0 0 361343390 0 361343390 1203986 nan 0 356051800 0 0 350598194 358979844 0 0 nan merged_DeadCell_2 367325626 0 2442654 0 30298822 183393462 0 183393462 2948846 0 97.62 1066160 0 0.29 nan 99.48 0 0 0 369229578 0 369229578 1274008 nan 0 363816812 0 0 358056496 366786924 0 0 nan merged_DeadCell_2_2 151335088 0 1008533 0 12452954 75607394 0 75607394 1266032 0 97.47 510093 0 0.34 nan 99.42 0 0 0 152223321 0 152223321 550935 nan 0 149816462 0 0 147391940 151214788 0 0 nan