##fileformat=VCFv4.3 ##fileDate=20230328 ##source=nanomonsv-0.5.0 ##reference=/projects/jfan_prj/jfan_prj/Nanopore_Testing/2021_nanopore_sv_testing/scratch/depth_testing/POG/COLO829/hg38_no_alt.fa ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##FILTER= ##FILTER= ##FILTER= ##FILTER= ##FILTER= ##FILTER= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##ALT= ##ALT= ##ALT= ##FORMAT= ##FORMAT= #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT TUMOR CONTROL chr1 10073483 r_3 A . PASS END=10241230;SVTYPE=DEL;SVLEN=-167747;SVINSLEN=11;SVINSSEQ=TTACAAAGTAA TR:VR 82:11 38:0 chr1 233751420 r_59_0 G G[chr10:56889448[ . PASS SVTYPE=BND;MATEID=r_59_1 TR:VR 98:6 30:0 chr10 56889448 r_59_1 A ]chr1:233751420]A . PASS SVTYPE=BND;MATEID=r_59_0 TR:VR 98:6 30:0 chr14 20790587 d_650 C . Too_small_size END=20790623;SVTYPE=DEL;SVLEN=-36 TR:VR 34:8 13:0 chr19 27429105 d_1174 A . PASS END=27429230;SVTYPE=DEL;SVLEN=-125;SVINSLEN=123;SVINSSEQ=GAAGCATTCTGAGAAACTCTTTCGGATGTGTGCATTTATCTCACAGTGTTGAACCTTTCCTTTGATTGAGCAGTTTGGAAACCGTATTTTTGTAGTATCTGCAAATGGATATTTGGTGTGCTT TR:VR 52:27 16:0 chr2 148086396 r_276 T . PASS END=151692384;SVTYPE=DUP;SVLEN=3605988;SVINSLEN=10;SVINSSEQ=TATTTATAAA TR:VR 62:7 30:0 chr20 61621 i_872 C . Too_low_VAF END=61621;SVTYPE=INS;SVINSLEN=492;SVINSSEQ=TCTTCTCCATTCCATTCAATTTCATTCCATTCCCTTCCACTCCACTCCTTTCCATTCCAATCCATTCCACTCCATTCCATTCCATTCCACACCACTCCACTAAGCTCCAATCCACTCCATTCCATGGCGTTACTCTCCAGTCCATTCCATTACACTCCATCTCCACTGCAATCCAATCTACTCCACTCCTTTCCATTCCATTCCACTCCATTCCATTCCATCCCATACACTCCATTTTATTCCACTCCACTGCCTCCGATTCCATTGCATTCGACTCCGTTCCATTCCCCTCCATTCCATTCCATTCCATTCCACTCCACTCCACTCCATGCCATTCGAATCCACTCCATTCCATTCCCTCTGCACTCCATTCCCTCTGAATTCCATTCCTCTCCACTCCGCTCCACTCCACTCCACTTCATTCCATTCTATTTCATTCCATTCCACTCCATTTCATTCCACTCCATTTCATTCCATTCCATTCCATTCCAC TR:VR 93:4 40:1 chr22_KI270739v1_random 35742 i_1058 A . PASS END=35743;SVTYPE=INS;SVINSLEN=174;SVINSSEQ=CTGTATCAAACCTGCTCTATGAAAGGGAATGTTCAACTCTGTGACTTGAATGCAAACATCACTAAGAAGTTTCTGAGAATGCTTCTGTCTAGATTTTATATGAAGATATTCCCGTTTCCAACGAAATCATCAATGCTATCCAAATATCCACTTGCAGATTCTACGAAAAAGACT TR:VR 25:7 2:0 chr4 104104940 d_1784 A . PASS END=104105011;SVTYPE=DEL;SVLEN=-71;SVINSLEN=4;SVINSSEQ=TTTT TR:VR 15:6 9:0 chrX 129686457 d_2272 G . PASS END=129686792;SVTYPE=DEL;SVLEN=-335 TR:VR 36:21 18:0 chr1 104869138 d_49 T . PASS END=104869391;SVTYPE=DEL;SVLEN=-253 TR:VR 16:7 21:0 chr1 159895084 r_40_0 C [chr14:72558775[A . PASS SVTYPE=BND;MATEID=r_40_1 TR:VR 108:6 32:0 chr14 72558775 r_40_1 A [chr1:159895084[A . PASS SVTYPE=BND;MATEID=r_40_0 TR:VR 108:6 32:0 chr1 23383859 d_36 A . PASS END=23384780;SVTYPE=DEL;SVLEN=-921 TR:VR 39:30 12:0 chr13 65210122 r_148 T . PASS END=65245323;SVTYPE=DEL;SVLEN=-35201 TR:VR 29:5 22:0 chr14 25210551 r_154_0 T TCACCCACCCCCATAGAGCAGTTTTCATACACTGCTTTTGTAGAATCTGCTTGTGGATATTTGGAGCTCTTTGAGGAATTCGTTGTAAACGGGATATCCTCACATACAAACTAGACAGAAGCATTCTCGGAAACAGCTCTGTGA]chrUn_KI270538v1:63213] . Too_low_VAF SVTYPE=BND;MATEID=r_154_1;SVINSLEN=143;SVINSSEQ=CACCCACCCCCATAGAGCAGTTTTCATACACTGCTTTTGTAGAATCTGCTTGTGGATATTTGGAGCTCTTTGAGGAATTCGTTGTAAACGGGATATCCTCACATACAAACTAGACAGAAGCATTCTCGGAAACAGCTCTGTGA TR:VR 92:3 41:1 chrUn_KI270538v1 63213 r_154_1 A ATCACAGAGCTGTTTCCGAGAATGCTTCTGTCTAGTTTGTATGTGAGGATATCCCGTTTACAACGAATTCCTCAAAGAGCTCCAAATATCCACAAGCAGATTCTACAAAAGCAGTGTATGAAAACTGCTCTATGGGGGTGGGTG]chr14:25210551] . Too_low_VAF SVTYPE=BND;MATEID=r_154_0;SVINSLEN=143;SVINSSEQ=TCACAGAGCTGTTTCCGAGAATGCTTCTGTCTAGTTTGTATGTGAGGATATCCCGTTTACAACGAATTCCTCAAAGAGCTCCAAATATCCACAAGCAGATTCTACAAAAGCAGTGTATGAAAACTGCTCTATGGGGGTGGGTG TR:VR 92:3 41:1 chr14_GL000225v1_random 28830 d_695 A . Too_low_VAF END=29004;SVTYPE=DEL;SVLEN=-174;SVINSLEN=39;SVINSSEQ=CCCAAATGATGCAAATCTTCTCTAGGCTCCGCAGGGAGT TR:VR 339:3 132:1 chr16 2457538 d_952 G . PASS END=2458270;SVTYPE=DEL;SVLEN=-732 TR:VR 27:10 9:0 chr17 31095847 r_216 G . PASS END=31373196;SVTYPE=DEL;SVLEN=-277349;SVINSLEN=11;SVINSSEQ=AGGTATATAGA TR:VR 41:10 37:0 chr4 38663292 d_1742 T . PASS END=38663814;SVTYPE=DEL;SVLEN=-522 TR:VR 39:9 12:0 chr8 60245234 d_2099 A . PASS END=60245535;SVTYPE=DEL;SVLEN=-301 TR:VR 54:3 14:0 chrX 67190161 d_2244 C . PASS END=67190630;SVTYPE=DEL;SVLEN=-469;SVINSLEN=5;SVINSSEQ=ACAAC TR:VR 35:15 19:0 chr1 159943727 r_41_0 A [chr1:160342345[C . PASS SVTYPE=BND;MATEID=r_41_1 TR:VR 116:8 22:0 chr1 160342345 r_41_1 C [chr1:159943727[C . PASS SVTYPE=BND;MATEID=r_41_0 TR:VR 116:8 22:0 chr10 73501929 d_460 T . PASS END=73502224;SVTYPE=DEL;SVLEN=-295 TR:VR 22:7 7:0 chr11 90595693 d_547 T . Too_small_size END=90595731;SVTYPE=DEL;SVLEN=-38 TR:VR 23:12 17:0 chr14 27442134 d_651 T . PASS END=27442470;SVTYPE=DEL;SVLEN=-336 TR:VR 32:5 13:0 chr17 31218816 d_1036 C . PASS END=31220108;SVTYPE=DEL;SVLEN=-1292 TR:VR 17:5 21:0 chr2 149136417 r_277 A . PASS END=149358609;SVTYPE=DEL;SVLEN=-222192 TR:VR 86:10 26:0 chr22 20163209 d_1530 C . Too_low_VAF END=20163494;SVTYPE=DEL;SVLEN=-285 TR:VR 129:4 69:1 chr4 39716622 i_1259 C . PASS END=39716622;SVTYPE=INS;SVINSLEN=245;SVINSSEQ=CCCCATCTCTACCAAAAATACAAAAAATTAGCTGGGTGTGGTGGCACATGCTTGTAATCTCAGCTATTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGACAGGCAGAGGTTGCAGTGAGCTGAGATCACATCACTGTACTCCAGCCTGGGTGACAGAGACCGTGTCTCAAAAAAAATTTTTTTAAATAATGCATGGGCCGGGCATGGTGGCTTAATGCCTGTAATTCCAACGTTTTGGGAG TR:VR 38:8 20:0 chr5 47063435 i_1328 G . PASS END=47063435;SVTYPE=INS;SVINSLEN=343;SVINSSEQ=TGAATGCACCCGTCACAAAGCAGTTTCTGAGAATGCTTCTGTCTAGTTTTTATGTGAAGATATTCCTTTTTCCACCATAGGCAACAAAGCGCTCCAAATGAACAATAGCATATCCTACAAAAAGACTGTTTCCAAACTTCTCTATCAAAAGAACGGTTCCACTCTGTGAGGTGAATTCACACATCACAAAGCAGTTTCTGAGAATGCTTCTCTCTAGTTTGTTTGTGAAGATATTTCCTTTTCCATATTAGGCCTCAAATCGCTCCAAATATCCACTTGCAGATACTACAAAAATACTGATTCAAAACTGCTCCTTAAAAAGGACGGTTCAACTCTATGAGTT TR:VR 12:6 5:0 chr6 119013246 d_1962 T . PASS END=119013464;SVTYPE=DEL;SVLEN=-218 TR:VR 32:10 11:0 chr9 4313460 r_438 T . PASS END=6659613;SVTYPE=DEL;SVLEN=-2346153;SVINSLEN=4;SVINSSEQ=TGAG TR:VR 56:13 40:0 chrUn_KI270743v1 162024 r_447_0 G GTGCTTCCAGGGGA[chrUn_KI270744v1:107473[ . Too_low_VAF SVTYPE=BND;MATEID=r_447_1;SVINSLEN=13;SVINSSEQ=TGCTTCCAGGGGA TR:VR 197:3 75:0 chrUn_KI270744v1 107473 r_447_1 A ]chrUn_KI270743v1:162024]TCCCCTGGAAGCAA . Too_low_VAF SVTYPE=BND;MATEID=r_447_0;SVINSLEN=13;SVINSSEQ=TCCCCTGGAAGCA TR:VR 197:3 75:0 chrX 73835092 r_452 A . PASS END=99908223;SVTYPE=DEL;SVLEN=-26073131 TR:VR 83:6 25:0 chr1 159943681 i_96 A . PASS END=159943713;SVTYPE=INS;SVINSLEN=334;SVINSSEQ=TTTAGGAACCATCTACACTGAGATGACAACCAAAGCTAGGAAAACTTTATTTACTACCCGGAAATAGTACTTGAGGCTTATAACCCCAATAAAGTCTCAACTTGATAGAGTTGCCAGATAAAATGCAGGATACCCAGTTAAATTTGAATTTCAGGTAAACAATGAATAGTTTTTTAGTCTGTCGTTGCTTACCAGAAGTTCAAATTTATCTGGACATCTCGTATTTTTATTTGCTAAGTACGGCAGCTCTAGAGCTCGAGTGTGGGTCGTTGGGGGTGGAGGGCAAATACTGAGATCGCAGTATTAGCCTCAGAACGTTAGAATGTGAAAGTCA TR:VR 57:8 7:0 chr1 235543469 r_61 A . PASS END=235565718;SVTYPE=DEL;SVLEN=-22249 TR:VR 93:12 26:0 chr13 67721101 d_612 A . PASS END=67721206;SVTYPE=DEL;SVLEN=-105;SVINSLEN=3;SVINSSEQ=TGT TR:VR 28:7 17:0 chr14 31683045 d_652 C . PASS END=31683176;SVTYPE=DEL;SVLEN=-131;SVINSLEN=5;SVINSSEQ=AAAAA TR:VR 34:7 15:0 chr16 65818114 r_202 T . PASS END=65925378;SVTYPE=DEL;SVLEN=-107264 TR:VR 61:8 31:0 chr19 9013244 i_679 C . PASS END=9013277;SVTYPE=INS;SVINSLEN=253;SVINSSEQ=CTGCCTAAAGCCAACACATTTTCCAAAATCCCTGGCTGCCTCAACAGTTTTCGGAGTGCTCTTACAATCCTCAGGGGTGCTGTGTGTGGGGGTGTGATTCTCTATTAATCCAAGCTCCTCATAATCTGATAAATGCTGCCTGGAGTTCATCTCCCTCACTAAACTGTGAATTCATGAATCCATGCGTGCTTCATGAATTACAGAGATTAAGAGTACATGCTCTAGATTTAGAATGCTTGAGGCTAATCCAACC TR:VR 60:9 15:0 chr2 38891999 d_1232 G . PASS END=38892227;SVTYPE=DEL;SVLEN=-228 TR:VR 30:10 9:0 chr4 88740649 r_358_0 G ]chr7:149846717]A . PASS SVTYPE=BND;MATEID=r_358_1 TR:VR 46:6 27:0 chr7 149846717 r_358_1 A A[chr4:88740649[ . PASS SVTYPE=BND;MATEID=r_358_0 TR:VR 46:6 27:0 chr5 47063648 i_1329 T . PASS END=47063653;SVTYPE=INS;SVINSLEN=177;SVINSSEQ=CTAGTTTTGACATGAAGATATTTCCTTTTCCATCATAGGCCTCAAATCTCTCCAAATATCCACTTGCAGATACTACAAAAAGACTGTTTCAAAACTGCTCTCTCAAAAGGAAGGTTCAATACTGTGAGTTGAATGCACTCATCACAAGGCAGTTTCTGAGAATTCTTCTGTCTAGTT TR:VR 12:6 6:0 chr6 125928694 r_404 A . PASS END=126452072;SVTYPE=DUP;SVLEN=523378 TR:VR 113:16 29:0 chrX 75690223 r_453 G . PASS END=75940529;SVTYPE=DEL;SVLEN=-250306 TR:VR 55:8 30:0 chr11 99235875 i_256 T . PASS END=99235886;SVTYPE=INS;SVINSLEN=279;SVINSSEQ=TCATGAGGAAGGCAAGGAACCTGGAAGCTGGCTTCTGCAGTGAACCAAAATAGGACTTCACGTCATGGACGTGGTATTCTTAAAAATAATAATAAAAAATTGAAACTACTGAGAGTTAAAATGGGCAGTAGAAACTTCACAGGTATGCTTCATTGTCAATATACTTCTAATCTAAAAACAATAATAATCTAAACAGAAAAAGACTTTGACCTTGGCCAAATATATTCTCAGTAATCATGGAGTACCAAGCATTGTTTTAGCAGAAAATCAAATTAGGAT TR:VR 33:24 13:0 chr12 15385268 d_557 G . PASS END=15385331;SVTYPE=DEL;SVLEN=-63 TR:VR 33:8 12:0 chr13 71862788 d_613 T . Too_small_size END=71862825;SVTYPE=DEL;SVLEN=-37 TR:VR 25:17 11:0 chr14 33596332 r_155_0 T [chr14:34024141[G . PASS SVTYPE=BND;MATEID=r_155_1 TR:VR 66:4 32:0 chr14 34024141 r_155_1 G [chr14:33596332[G . PASS SVTYPE=BND;MATEID=r_155_0 TR:VR 66:4 32:0 chr16 30321182 d_959 A . PASS END=30321545;SVTYPE=DEL;SVLEN=-363 TR:VR 21:8 17:0 chr16 66380097 i_536 A . Too_small_size END=66380097;SVTYPE=INS;SVINSLEN=47;SVINSSEQ=GGGGTAGGTGTTGGTGGTGATCACGGTGATGGTGGTGATGATAAAGG TR:VR 38:4 23:0 chr18 13048946 r_228 G . PASS END=14234760;SVTYPE=DEL;SVLEN=-1185814 TR:VR 79:6 39:0 chr4 4042482 d_1733 A . PASS END=4046085;SVTYPE=DEL;SVLEN=-3603 TR:VR 24:8 18:0 chr4 89198243 r_359_0 G GTT]chr4:89203480] . PASS SVTYPE=BND;MATEID=r_359_1;SVINSLEN=2;SVINSSEQ=TT TR:VR 30:6 22:0 chr4 89203480 r_359_1 A AAA]chr4:89198243] . PASS SVTYPE=BND;MATEID=r_359_0;SVINSLEN=2;SVINSSEQ=AA TR:VR 30:6 22:0 chr5 47068215 i_1330 C . PASS END=47068215;SVTYPE=INS;SVINSLEN=342;SVINSSEQ=ACACAACACAAAGCAGTTTCTGAGCATCCTTCTGTCTAGTTTGTATGTGAAGATAGTTCCTTTTCCCTCATAGGCCTCAAATCGTTCCAAATATCGACTTGCAGATACTACAAAAAGACTGTTTGAAAACTGTTCTCTCAGAAGGAAGGTTCAACTCCGTGTGTTGAATGCACACATCACAAAGCAGTTTCTGAGAATGCTTCTGTCTAGTTTGTATGTGAAGATATCCCGTTTACAACGAATTCCTCAAAGAGCTCCAAATATCCACAAGCAGATTCTACAGAAGCAGTGTATCAAAACTGCTCTATCAAAAGAAAGGTTCAACTCTCTGAATAGAACAAA TR:VR 16:9 3:0 chr6 125934139 r_405 A . PASS END=126470193;SVTYPE=DUP;SVLEN=536054 TR:VR 96:7 21:0 chrX 132931823 r_472_0 A A]chrX:155861852] . PASS SVTYPE=BND;MATEID=r_472_1 TR:VR 93:12 25:0 chrX 155861852 r_472_1 G G]chrX:132931823] . PASS SVTYPE=BND;MATEID=r_472_0 TR:VR 93:12 25:0 chr1 62708264 r_19_0 G G]chr12:120615254] . PASS SVTYPE=BND;MATEID=r_19_1 TR:VR 63:10 36:0 chr12 120615254 r_19_1 C C]chr1:62708264] . PASS SVTYPE=BND;MATEID=r_19_0 TR:VR 63:10 36:0 chr11 49836858 r_104 T . PASS END=49845839;SVTYPE=DEL;SVLEN=-8981 TR:VR 46:10 23:0 chr13 73818236 d_614 C . PASS END=73818529;SVTYPE=DEL;SVLEN=-293 TR:VR 20:12 21:0 chr14 34024413 r_156_0 A A]chr14:34073765] . Too_low_VAF SVTYPE=BND;MATEID=r_156_1 TR:VR 79:3 27:0 chr14 34073765 r_156_1 G G]chr14:34024413] . Too_low_VAF SVTYPE=BND;MATEID=r_156_0 TR:VR 79:3 27:0 chr14_KI270725v1_random 105435 r_183_0 A A[chr22_KI270735v1_random:30997[ . PASS SVTYPE=BND;MATEID=r_183_1 TR:VR 151:8 78:0 chr22_KI270735v1_random 30997 r_183_1 T ]chr14_KI270725v1_random:105435]T . PASS SVTYPE=BND;MATEID=r_183_0 TR:VR 151:8 78:0 chr16 3224576 r_189_0 C C]chr19:46605641] . PASS SVTYPE=BND;MATEID=r_189_1 TR:VR 56:17 33:0 chr19 46605641 r_189_1 A A]chr16:3224576] . PASS SVTYPE=BND;MATEID=r_189_0 TR:VR 56:17 33:0 chr16 6746375 d_953 C . Too_small_size END=6746420;SVTYPE=DEL;SVLEN=-45 TR:VR 34:7 16:0 chr19 9333883 r_244_0 T ]chr20:3087309]A . PASS SVTYPE=BND;MATEID=r_244_1 TR:VR 144:18 25:0 chr20 3087309 r_244_1 A A[chr19:9333883[ . PASS SVTYPE=BND;MATEID=r_244_0 TR:VR 144:18 25:0 chr2 164531500 i_855 G . PASS END=164531500;SVTYPE=INS;SVINSLEN=218;SVINSSEQ=GAAAAAAATATCTCCCAATGCTATCCCTCCCCCTCCCCCGACCCCACCACAGTCCCCTGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAATAACAATAAAATGAGATAAAATCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAG TR:VR 40:6 9:0 chr2 42787526 r_268 G . PASS END=43286701;SVTYPE=DUP;SVLEN=499175 TR:VR 69:6 34:0 chr20 23175369 i_886 A . PASS END=23175372;SVTYPE=INS;SVINSLEN=49;SVINSSEQ=CCTTGCTCAATTTCACTTCCTCCTTCGTAAAGGAGGTACTTCGTAAAGT TR:VR 64:31 13:0 chr20 29849280 i_915 A . PASS END=29849280;SVTYPE=INS;SVINSLEN=173;SVINSSEQ=TAAAAGCTACACAGAAGCATTCTGAGAAACTTCTTAGTGATGTGTGCATTCATCTCACAGTGTTGAAACTTTGTTTTTATTGAGCAGTTTTGAAACATATTTTATGTAGTATCTGCAAGGGGACATTTTGAGCCATTTGAGGCGTATTGTGGAAAAGGAAATATCTTCCCATT TR:VR 108:7 27:0 chr3 101964943 r_333_0 C C[chr8:56948921[ . PASS SVTYPE=BND;MATEID=r_333_1 TR:VR 97:6 27:0 chr8 56948921 r_333_1 T ]chr3:101964943]T . PASS SVTYPE=BND;MATEID=r_333_0 TR:VR 97:6 27:0 chr4 43010596 d_1744 G . PASS END=43010644;SVTYPE=DEL;SVLEN=-48 TR:VR 29:4 10:0 chr6 129351529 d_1963 A . PASS END=129351631;SVTYPE=DEL;SVLEN=-102 TR:VR 44:14 14:0 chr7 25186694 i_1482 A . PASS END=25186712;SVTYPE=INS;SVINSLEN=65;SVINSSEQ=TGCTTCTACAAGCCAAGAAATGCTAAATATTGCCAGCAAACCATCCAAGGTTAGAGGAGAGCTGT TR:VR 44:27 12:0 chrX 132931834 r_473_0 A [chrX:155861861[AGAATATTAGATT . PASS SVTYPE=BND;MATEID=r_473_1;SVINSLEN=12;SVINSSEQ=AGAATATTAGAT TR:VR 93:8 25:0 chrX 155861861 r_473_1 T [chrX:132931834[ATCTAATATTCTT . PASS SVTYPE=BND;MATEID=r_473_0;SVINSLEN=12;SVINSSEQ=ATCTAATATTCT TR:VR 93:8 25:0 chrX 83243132 r_454_0 T [chrX:83245015[AA . PASS SVTYPE=BND;MATEID=r_454_1;SVINSLEN=1;SVINSSEQ=A TR:VR 58:5 13:0 chrX 83245015 r_454_1 A [chrX:83243132[TA . PASS SVTYPE=BND;MATEID=r_454_0;SVINSLEN=1;SVINSSEQ=T TR:VR 58:5 13:0 chr1 11014180 d_34 A . PASS END=11015180;SVTYPE=DEL;SVLEN=-1000 TR:VR 48:36 17:0 chr1 160288442 r_42_0 G GGATGCAGAGATCAGAGAAGAGAAGATGCTTTGCAGCCAGCCC]chr14:72558903] . PASS SVTYPE=BND;MATEID=r_42_1;SVINSLEN=42;SVINSSEQ=GATGCAGAGATCAGAGAAGAGAAGATGCTTTGCAGCCAGCCC TR:VR 103:7 33:0 chr14 72558903 r_42_1 A AGGGCTGGCTGCAAAGCATCTTCTCTTCTCTGATCTCTGCATC]chr1:160288442] . PASS SVTYPE=BND;MATEID=r_42_0;SVINSLEN=42;SVINSSEQ=GGGCTGGCTGCAAAGCATCTTCTCTTCTCTGATCTCTGCATC TR:VR 103:7 33:0 chr1 2664833 d_11 C . Too_low_VAF END=2665289;SVTYPE=DEL;SVLEN=-456;SVINSLEN=15;SVINSSEQ=AGCACCCCACACCCA TR:VR 342:4 119:1 chr10 76037247 r_87 C . PASS END=76223581;SVTYPE=DUP;SVLEN=186334 TR:VR 45:10 27:0 chr12 83144334 r_133 T . PASS END=83148582;SVTYPE=DUP;SVLEN=4248 TR:VR 59:3 16:0 chr16 3224607 r_190_0 T [chr19:46614223[CTTTCTGAATCACCAGACC . PASS SVTYPE=BND;MATEID=r_190_1;SVINSLEN=18;SVINSSEQ=CTTTCTGAATCACCAGAC TR:VR 53:7 31:0 chr19 46614223 r_190_1 C [chr16:3224607[GTCTGGTGATTCAGAAAGC . PASS SVTYPE=BND;MATEID=r_190_0;SVINSLEN=18;SVINSSEQ=GTCTGGTGATTCAGAAAG TR:VR 53:7 31:0 chr16 6932473 r_194 G . PASS END=7606874;SVTYPE=DEL;SVLEN=-674401 TR:VR 47:22 34:0 chr19 29010076 i_699 T . PASS END=29010076;SVTYPE=INS;SVINSLEN=376;SVINSSEQ=ATCTACACACACCTACTTGGATACATATACATGTCTGCACATACACTTAGCCTACACTCACATATGCTTGCTATGACCATAGATAATGCACGTTATAAATTGTTATTACTAATACACCCCCAAATATAGTATCACTATACACGCCCAGACTGGAGCTCAGTGGCACCATCACTCCTTACACACATATCTAACCTACATGGGCACATACACACCTGACTAACACACACACTACTAACACACATATACACACATGCACACATACACCCACCTAACACACACACACCCTAACACACATACACACATACACACTGGTCTACACCCACCTAACACACACACACCCAACACACATATATACACATACACACATACACCCACC TR:VR 59:4 11:0 chr2 42787709 r_269_0 T TCATCCCAATGCTGTCATTTCAGAAAGGATTTCTTTT]chr2:43207665] . PASS SVTYPE=BND;MATEID=r_269_1;SVINSLEN=36;SVINSSEQ=CATCCCAATGCTGTCATTTCAGAAAGGATTTCTTTT TR:VR 81:6 31:0 chr2 43207665 r_269_1 C CAAAAGAAATCCTTTCTGAAATGACAGCATTGGGATG]chr2:42787709] . PASS SVTYPE=BND;MATEID=r_269_0;SVINSLEN=36;SVINSSEQ=AAAAGAAATCCTTTCTGAAATGACAGCATTGGGATG TR:VR 81:6 31:0 chr20 25217951 i_887 A . Too_low_VAF END=25217951;SVTYPE=INS;SVINSLEN=437;SVINSSEQ=CACATTAACCCAGACCTCTCTCTCCTCCTCCTCCTCCCACCTCCTCTGTCCTCCTCCTTCATCCTTTAATGTGTCTACAGTATACGATAGGGACATTCACCCAGACCTCTCTCTCCTCCTCCTCCTCCCACCTCCTCTGTCCTCCTCCTTCATCCTTTAATGTGTCTACAGTATACGCACATTCACCCAGACCTCTCTCTCCTCCTCCTCCTTCTCCCGCCTCCTCTGCCCTCCTCCTTCATCCTTTAATGTGTCTACAGTATACGCACATTCACTCCAGACCCCTCTCTCCTCCTCCTCCTCCCACCTCCTCTGGTCCTTCTCCTTCATCCTTTATCTATAGTATACGCACATTAACCCAGACCTCTCTCCTCCTCCTCCTCCCGCCTCCCCCTCTGTCCTCCTCCTTCATCCTTTAATGTGTCTACAGTATACGC TR:VR 68:3 9:0 chr3 101964966 r_334_0 G ]chr8:56948602]G . Too_low_VAF SVTYPE=BND;MATEID=r_334_1 TR:VR 97:4 27:0 chr8 56948602 r_334_1 G G[chr3:101964966[ . Too_low_VAF SVTYPE=BND;MATEID=r_334_0 TR:VR 97:4 27:0 chr3 197033989 d_1710 A . PASS END=197034163;SVTYPE=INS;SVINSLEN=297;SVINSSEQ=TGTTACACTCTTGCTGACTGGTTACTGTGTGAGCACCTGCAGTAGTGTGATGTCAGAGGATGTTACACTCTTGCTGACTGGTTACTTTGTGAGCACCTGCAGTAGTGTGATGTCAGAGGATGTTACGCTCTTGCTGACTGGTTACTTTGTGAGCACCTGCAGTAGTGTGATGTCAGAGGATGTTACGCTCTTGCTGACTGGTTACTGTGTGAGCACCTGCAGTAGTGTGATGTCAGAGGATGTTACGCTCTTGCTGACGGGTTGGGGTGTGAGCACCTGCAGTGAGTGTGATGTCAG TR:VR 87:12 22:0 chr4 44001410 d_1745 A . PASS END=44001462;SVTYPE=DEL;SVLEN=-52 TR:VR 33:11 12:0 chr4 95487205 d_1783 A . PASS END=95487312;SVTYPE=DEL;SVLEN=-107 TR:VR 21:11 11:0 chr5 16205053 i_1322 T . PASS END=16205053;SVTYPE=INS;SVINSLEN=322;SVINSSEQ=AAAAATGTTTTAGTTTCTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATATAAAAAAAAAAAAAAAAAAAAAATAACAATAAAATGAGATAAAATCTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA TR:VR 34:9 8:0 chr6 18565944 i_1376 T . PASS END=18565944;SVTYPE=INS;SVINSLEN=301;SVINSSEQ=CCTCCCTCCCTTCTTCCATCCCTTCTCCTTTCTCCCTCCTTCCCTTCCTTCTTCCTTCCCTCTCTTTCCTCCTTTCTCTCCCTCCTTCCCTTCCCTTTCCTTCCTTCCTTCCTTCCTCCCTCCTTCTTCCTTCCTTCCTTCCCTCCGTTTTTCATTTCTCTTTCTTCCTCCCTTCCCTCCCTCTCTTCCTTTCTTGTTTCCTTTCTTCCTTCTTCCTTTCCTCCCTTTCTTCCTCCTTCCCTTCTTCCTTTTCTTCCTTCCTCCCTCCCTCCCTTCCCTCCCTCCCTTCCTTCCTTCCTCC TR:VR 53:3 9:0 chrX 133434902 d_2273 C . PASS END=133434985;SVTYPE=DEL;SVLEN=-83 TR:VR 40:4 11:0 chr1 119803602 r_26_0 A [chr19:31486211[C . PASS SVTYPE=BND;MATEID=r_26_1 TR:VR 96:25 22:0 chr19 31486211 r_26_1 C [chr1:119803602[C . PASS SVTYPE=BND;MATEID=r_26_0 TR:VR 96:25 22:0 chr1 160342341 r_43_0 G G]chr7:74049385] . PASS SVTYPE=BND;MATEID=r_43_1 TR:VR 95:9 31:0 chr7 74049385 r_43_1 T T]chr1:160342341] . PASS SVTYPE=BND;MATEID=r_43_0 TR:VR 95:9 31:0 chr1 2665128 i_16 C . Too_low_VAF END=2665128;SVTYPE=INS;SVINSLEN=1364;SVINSSEQ=CGAGGTGAGCATCTGACAACAGGGAGCAGCACCCCACCCCATGGGGTGAGCACCTGACAACCTGGAGCAGCACCCACACCCCCAGGTGAGCATCTGATGGTCTGGAGCAGCACCCACAACCACAGGTGAGCATCGGAGAGTCAGGAGCAGTGCCCACACACCCAGGCGAGCATCTGACAGCCTGGAGCAGTGCCCACACCCCCAGGTGAGCATCTGACATCGTGGAGCAGCACCCACAGCCCAAGGTGAGCATCTGACAACCTGGAGCAGCACCCACGCCCCCAGGCGAGCATCTGAACACACGGAGCAGCACCCACACCCCCAGGCGAGCATCCGACAGCCTGGAGCAGCACCCACACACCCAGGTGAGCAACTGACAGCCTGGAGCAGCACCCACACACCCAGGTGATCATCTGACAGCCTGGAACAGCACGCTGCCCCCAAGGTGAGCATCTGACAGCCTGGAACAGCACACACACCCCCAGGCGAGCATCTGACAACCTGGAACAGCACCCATACGCCCAGATGAGCATCTGACAGCCTGGAACAGCACCCTGCACCCCCAGGTGAGCATCTGACAGCCTGGAACAGCACCCACACCCCCAGGTGAGCATCTGACCGCATCACATGGCATCCTCACCCCCAGTTGCGCATCTGATGGTCTGGAGCAGCACCCACACCCACAGGTGAGCATCAGACAGCCTGGAACCACAGCCACACCCCCAGGCAGGCATCTGACAGCCTGGAGCAGCATCCACACCCCCAGGTGAGCATTTGACAGCCTGGAACAGCACTCACACCCCCAGGAGAGCATCCGGCAGCCTGGAGCGGAACCCCACGGCCACAGGCGAGCATCTGAGAGCCTGGGTCGGCACCCACACCCCCAGGTGAGCATCTGATGGTTTGCGGCAACACCGACACCCACAGGTGAGCATCTGACAGCCTGGAACAGAACCCACACGCCCAGGTGAGCATCTGACAGCCTGGAACAACAGCCTGCACCACCAGGTGCGCATGTGACAGCCTGGAACAGCACCAACACCCCCAGGCGAGCATCTGACGGCCTGGAACAGCACCCACACCCCCAGGTGAGCATCAGACAGCCTGGAACAACACCCATACCCACAGGTGAGCATCTGACATCGTGGAGCAGCACCACACCCACAGGTGAGCATCTGACAACCTGGAGCAGCACCCACACCCACAGGTGAGCATCTGACAGCCTGGAACAGCACCCACACCCCCAGGTGAGAATCTGATTGTCTGGAGCATCACACACAACCACAGGTGAGCATCGGAGAGTCTGGAGCAGCCCCACATCCCAAGGCGAGGCATCTGACAACCTGGAGCAGCACCCACACCAC TR:VR 341:4 116:0 chr1 63754457 i_52 T . PASS END=63754457;SVTYPE=INS;SVINSLEN=121;SVINSSEQ=TGCATGAGTAATGTTCTGTCTCCACAACAGTATAATTTGTGTTAGTTGAGTTAACAGTAGCTGCTTTTGCAAAGAGACTGCAATGAAGAATGACTTAAAGAATATTGATGCTGTTTCGCAT TR:VR 35:24 4:0 chr10 7981039 r_64 G . PASS END=7982590;SVTYPE=DUP;SVLEN=1551 TR:VR 37:7 15:0 chr12 2280238 i_272 A . PASS END=2280239;SVTYPE=INS;SVINSLEN=199;SVINSSEQ=TACCTTGCTGTGCTTCAACCTTGGTTTAACCTCTCTTGATACCTTGCTGTGCTTTCTGTCAATAACCTCTTGATACCTTGCTGTGCTTCGCTTGAACTCTCTTGATACCTTGCTGTGCTTCGGTAATAACTTTGAGGCCCTTTGCTGTGTTTCAAGTTTAACTCTTGATATCTTGCTGTGCCTGTTTAACCTCTTGATA TR:VR 39:3 10:0 chr13 82128714 d_615 A . PASS END=82129586;SVTYPE=DEL;SVLEN=-872 TR:VR 25:7 27:0 chr16 72047394 d_1001 T . PASS END=72047966;SVTYPE=DEL;SVLEN=-572 TR:VR 28:7 20:0 chr19 33348871 r_251_0 C C]chr20:11750914] . PASS SVTYPE=BND;MATEID=r_251_1 TR:VR 111:27 31:0 chr20 11750914 r_251_1 T T]chr19:33348871] . PASS SVTYPE=BND;MATEID=r_251_0 TR:VR 111:27 31:0 chr2 167972740 i_856 T . PASS END=167972747;SVTYPE=INS;SVINSLEN=136;SVINSSEQ=ATAGGTATATTTAAAACGCCTTTGTGTTTACTTCTTGGATCTTGTTTTTCTGGAAAAAGGGTTTTGCTTCTCAGTCAACTGTATTATTTCTCTCCATTTTATCTTGCCACTCTTAATGCACACAAGAGGCCCTAAC TR:VR 48:3 9:0 chr2 42787706 r_270 C . PASS END=43211918;SVTYPE=DUP;SVLEN=424212 TR:VR 76:7 30:0 chr20 25373790 d_1360 T . PASS END=25374886;SVTYPE=DEL;SVLEN=-1096 TR:VR 51:15 13:0 chr3 153630199 d_1635 A . PASS END=153632046;SVTYPE=DEL;SVLEN=-1847 TR:VR 80:7 18:0 chr3 198104998 i_1222 T . Too_low_VAF END=198104999;SVTYPE=INS;SVINSLEN=652;SVINSSEQ=AGATTCTGCTACGGGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATTTAGATTCTGCTACAGGATGTGGACAGTGGGAGGGGAGACGCATGCAAATTTAGATTCTGCTACAGGATGTGGACAGTGGGAGGGAGACGCATGCAAATTTAGATTCTGCTACAGGATGTGGACAGTGGGAGGAGAGACGCGTGCAAATTTAGATTCTGCTGCAGGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATTTAGATTCTGCTACAGGATGTGGACAGTGGGAGGGAAGACGCGTGCAAATTTAGATTCTGCTACAGGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATTTAGATTCCGCTGCAGGATGTGGACCGTGGGAGGGGAGACGCGTGCAAATTTAGATTCCGCTGCAGGATGTGGACAGTGGAGGGGAGACGCATGCAAATTTAGATTCCGCTGCAGGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATTTAGATTCTGCTGCAGGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATTTAGATTCTGCTACAGGATGTGGACAGTGGGGAGGGGAGACGCGTGCAAATTTAGATTCTGCTACGCGATGTGGGACAGTGGGAGGGGAGACGCGTGCAAATTTAG TR:VR 143:7 21:0 chr5 162373904 d_1899 G . PASS END=162377212;SVTYPE=DEL;SVLEN=-3308 TR:VR 29:7 15:0 chr6 19077970 r_386 A . PASS END=19207764;SVTYPE=DUP;SVLEN=129794 TR:VR 110:20 25:0 chr7 26275520 r_411 A . PASS END=26297452;SVTYPE=DEL;SVLEN=-21932;SVINSLEN=13;SVINSSEQ=CAGACCCAGACAG TR:VR 61:6 27:0 chr8 69719599 d_2100 G . PASS END=69722565;SVTYPE=DEL;SVLEN=-2966 TR:VR 36:10 19:0 chrX 86481986 r_455_0 A [chrX:86487936[T . PASS SVTYPE=BND;MATEID=r_455_1 TR:VR 87:12 16:0 chrX 86487936 r_455_1 T [chrX:86481986[T . PASS SVTYPE=BND;MATEID=r_455_0 TR:VR 87:12 16:0 chr1 160342643 r_44_0 A A]chr14:73392835] . PASS SVTYPE=BND;MATEID=r_44_1 TR:VR 90:8 24:0 chr14 73392835 r_44_1 T T]chr1:160342643] . PASS SVTYPE=BND;MATEID=r_44_0 TR:VR 90:8 24:0 chr16 72802012 r_203 A . PASS END=72978800;SVTYPE=DEL;SVLEN=-176788 TR:VR 73:18 12:0 chr19 33349147 r_252_0 C [chr20:11603180[A . PASS SVTYPE=BND;MATEID=r_252_1 TR:VR 93:21 26:0 chr20 11603180 r_252_1 A [chr19:33349147[A . PASS SVTYPE=BND;MATEID=r_252_0 TR:VR 93:21 26:0 chr2 167972876 i_857 T . PASS END=167972876;SVTYPE=INS;SVINSLEN=212;SVINSSEQ=GCATTGTGTTATCTGACATTTTTGACTTTGGGGAGTATCAGAGATTGATCTGCATTATGAGAGGGCTTTAGTGTGCAGTAACAAGGTAGGAAATATACTTTTAGAGATGGGCCAATTCCAAAATGAGCTGATTGGCTTTGGGTTGCCATGCAATAAAATGCCCAGTAAAAGCGTTGCACTGTCTTCTCCCATAGCATCTCTTTTCTTTTGGG TR:VR 48:7 9:0 chr2 43210924 d_1233 C . Too_small_size END=43210965;SVTYPE=DEL;SVLEN=-41 TR:VR 36:6 15:0 chr2 90284532 r_272_0 C C]chr9:25681681] . PASS SVTYPE=BND;MATEID=r_272_1 TR:VR 70:4 35:0 chr9 25681681 r_272_1 A A]chr2:90284532] . PASS SVTYPE=BND;MATEID=r_272_0 TR:VR 70:4 35:0 chr20 25494089 d_1361 T . PASS END=25495038;SVTYPE=DEL;SVLEN=-949 TR:VR 77:10 14:0 chr3 102059098 r_335 G . PASS END=102088785;SVTYPE=DEL;SVLEN=-29687 TR:VR 68:9 24:0 chr8 70490884 r_431_0 G [chr8:71257726[CATCATGATCTTGTA . PASS SVTYPE=BND;MATEID=r_431_1;SVINSLEN=14;SVINSSEQ=CATCATGATCTTGT TR:VR 82:17 27:0 chr8 71257726 r_431_1 A [chr8:70490884[ACAAGATCATGATGA . PASS SVTYPE=BND;MATEID=r_431_0;SVINSLEN=14;SVINSSEQ=ACAAGATCATGATG TR:VR 82:17 27:0 chr9 62799870 r_442_0 C [chr9:63818361[C . Too_low_VAF SVTYPE=BND;MATEID=r_442_1 TR:VR 390:9 191:1 chr9 63818361 r_442_1 C [chr9:62799870[C . Too_low_VAF SVTYPE=BND;MATEID=r_442_0 TR:VR 390:9 191:1 chrX 86980696 r_456_0 A A]chrX:87023997] . Too_low_VAF SVTYPE=BND;MATEID=r_456_1 TR:VR 159:7 29:0 chrX 87023997 r_456_1 A A]chrX:86980696] . Too_low_VAF SVTYPE=BND;MATEID=r_456_0 TR:VR 159:7 29:0 chr10 85182400 i_189 T . PASS END=85182400;SVTYPE=INS;SVINSLEN=76;SVINSSEQ=AAGGAATGCGAGCAGTCCTGCCCTTACCCCCCATTTCTGGAAGCTAAATTAATGAGCAGGCTTCTGCAGTTTTAAA TR:VR 29:12 14:0 chr11 50201681 r_105 T . PASS END=50218395;SVTYPE=DEL;SVLEN=-16714 TR:VR 65:18 28:0 chr16 72949028 r_204_0 G G]chr16:73393902] . PASS SVTYPE=BND;MATEID=r_204_1 TR:VR 63:9 36:0 chr16 73393902 r_204_1 T T]chr16:72949028] . PASS SVTYPE=BND;MATEID=r_204_0 TR:VR 63:9 36:0 chr18 15815498 i_625 A . PASS END=15815498;SVTYPE=INS;SVINSLEN=336;SVINSSEQ=GACAGAAGCATTCTCAGAAACTTATTTGAGATGTGTGTACTCAACTAAGAGAATTGAACCACCGTTTTGAAGGAGCAGTTTTGAAACACTCTTTTTCTGGAATCTGCAAGTGGATATTTGGCTAGCTTTGGGGATTTCGCTGGAAGCGGGAATACATATAAAAAGCACACAGCAGCGTTCTGAGAAACTGCTTTCTGATGTTTGCATTCAAGTCAAAAGTTGAACATTCCCTTTCATAGAGCAGGTTTGAAACACCCTTTTTGTAGTATCTGGAAGTGGACATTTGGAGCGCTTTCAGGGCTAAGGTGAAAAAGGAAATATCTTCCCATAAAAACT TR:VR 69:4 14:0 chr19 33353168 r_253_0 C C[chr20:11900699[ . PASS SVTYPE=BND;MATEID=r_253_1 TR:VR 96:22 38:0 chr20 11900699 r_253_1 C ]chr19:33353168]C . PASS SVTYPE=BND;MATEID=r_253_0 TR:VR 96:22 38:0 chr2 48686438 d_1234 G . PASS END=48689003;SVTYPE=DEL;SVLEN=-2565 TR:VR 26:10 16:0 chr21 42570483 d_1484 T . PASS END=42570595;SVTYPE=DEL;SVLEN=-112 TR:VR 42:11 12:0 chr4 12713849 d_1736 T . Too_small_size END=12713895;SVTYPE=DEL;SVLEN=-46 TR:VR 42:4 15:0 chr7 28428007 d_1995 A . PASS END=28428055;SVTYPE=DEL;SVLEN=-48 TR:VR 44:7 16:0 chr8 70502702 r_432 C . PASS END=71253694;SVTYPE=DEL;SVLEN=-750992;SVINSLEN=6;SVINSSEQ=TTTCTA TR:VR 80:15 21:0 chrX 87477338 r_457_0 T TGAAATTTGTCAATTTCAAA]chrX:87479207] . PASS SVTYPE=BND;MATEID=r_457_1;SVINSLEN=19;SVINSSEQ=GAAATTTGTCAATTTCAAA TR:VR 55:6 20:0 chrX 87479207 r_457_1 A ATTTGAAATTGACAAATTTC]chrX:87477338] . PASS SVTYPE=BND;MATEID=r_457_0;SVINSLEN=19;SVINSSEQ=TTTGAAATTGACAAATTTC TR:VR 55:6 20:0 chr12 8362802 r_123_0 T ]chr3:75543641]T . PASS SVTYPE=BND;MATEID=r_123_1 TR:VR 53:3 29:0 chr3 75543641 r_123_1 T T[chr12:8362802[ . PASS SVTYPE=BND;MATEID=r_123_0 TR:VR 53:3 29:0 chr13 83597849 r_149 T . PASS END=83650798;SVTYPE=DUP;SVLEN=52949 TR:VR 62:20 32:0 chr16 72989931 d_1002 T . PASS END=72990046;SVTYPE=DEL;SVLEN=-115 TR:VR 51:21 14:0 chr17 43694534 d_1040 A . Too_small_size END=43694578;SVTYPE=DEL;SVLEN=-44 TR:VR 26:7 13:0 chr2 51239931 d_1235 A . PASS END=51242086;SVTYPE=DEL;SVLEN=-2155;SVINSLEN=10;SVINSSEQ=AAAAAAAAAA TR:VR 21:7 15:0 chr4 46313076 r_353 C . PASS END=46342433;SVTYPE=DEL;SVLEN=-29357 TR:VR 50:10 21:0 chr7 145956457 r_421 T . PASS END=145974017;SVTYPE=DEL;SVLEN=-17560 TR:VR 40:19 20:0 chr7 29187998 d_1996 A . Too_small_size END=29188037;SVTYPE=DEL;SVLEN=-39 TR:VR 38:4 18:0 chr8 72849383 d_2101 A . PASS END=72849467;SVTYPE=DEL;SVLEN=-84 TR:VR 62:5 17:0 chr9 6696244 d_2114 T . Too_small_size END=6696289;SVTYPE=DEL;SVLEN=-45 TR:VR 30:9 13:0 chrX 136409001 r_474_0 C C]chrX:136434216] . PASS SVTYPE=BND;MATEID=r_474_1 TR:VR 84:6 22:0 chrX 136434216 r_474_1 G G]chrX:136409001] . PASS SVTYPE=BND;MATEID=r_474_0 TR:VR 84:6 22:0 chrX 88643902 r_458 A . PASS END=88646841;SVTYPE=DEL;SVLEN=-2939;SVINSLEN=9;SVINSSEQ=TTTTTCTAA TR:VR 46:18 15:0 chr1 166505118 r_45_0 A A[chr14:54274643[ . PASS SVTYPE=BND;MATEID=r_45_1 TR:VR 62:6 38:0 chr14 54274643 r_45_1 T ]chr1:166505118]T . PASS SVTYPE=BND;MATEID=r_45_0 TR:VR 62:6 38:0 chr1 2668144 d_15 G . Too_low_VAF;Too_small_size END=2668188;SVTYPE=DEL;SVLEN=-44;SVINSLEN=4;SVINSSEQ=TGAG TR:VR 346:3 122:0 chr10 90412507 r_88 T . PASS END=90424412;SVTYPE=DEL;SVLEN=-11905 TR:VR 22:8 32:0 chr12 10885097 r_124 T . PASS END=11416866;SVTYPE=DEL;SVLEN=-531769 TR:VR 73:10 32:0 chr12 27670114 d_558 G . PASS END=27670313;SVTYPE=DEL;SVLEN=-199 TR:VR 33:9 13:0 chr12 83642337 r_134 C . PASS END=83668788;SVTYPE=DEL;SVLEN=-26451 TR:VR 67:14 24:0 chr16 73071222 r_205 T . PASS END=73297968;SVTYPE=DUP;SVLEN=226746 TR:VR 94:32 24:0 chr17 44736317 r_217_0 C [chr8:73077249[G . PASS SVTYPE=BND;MATEID=r_217_1 TR:VR 97:7 30:0 chr8 73077249 r_217_1 G [chr17:44736317[G . PASS SVTYPE=BND;MATEID=r_217_0 TR:VR 97:7 30:0 chr2 168975063 i_858 A . PASS END=168975063;SVTYPE=INS;SVINSLEN=927;SVINSSEQ=TGTTATATTTATATAAATATTTATAAATATTTTTATATGTATATATAAATATTTATATAATATTTATATAATTTATATATAAATATATTATATATAAATATTTATATATTCAATATATAAATATTTATTTTATTTATATTTATATATTTATAGATAAATATATATATATATGTACATATATATATATTTATATATTTATATATAAATATATAAATATTTATGTGTATTTATATATAAATATATAAATATTTATATATATTTATAGATAAATATATAAATATTTATATATATTTATATATAAATATATAAATATTTATATATATTTATAGATAAATATATAAATATTTATATATATTTATATATAAATATATAAATATTTATTATATTTATAGATAAATATATAAATATTTATTATATTTATAGATAAATATATAAATATTTATGTATATTTATAGATAAATATATAAATATTTTGTATATTTATAGATAAATATATAAATATTTATGTATATTTATAGATAAATATATAAATATTTTTATATTTTTATATATGTGTATAAATATTTATCTATATATAGATATATGTATATATATTTATATATGTATATATACAATGTATAAATATTTTTATATATATAGATATATATCAAGTATATAAATATTTTTATATTTATATTATATATATGTATATAAATATTTTTATATTTATAAATATATAAATATTTTTATATTTATAGATAAATATATAAATATTTTTATATATATTTATAAATATATAAATATTTATTATATTTATATATAAATATATAAATATTTTTTATATTTATATATAAATATATAAATATTTTTATATTTATAGATAAATATATAAATATTTTCACATATTTATATATGTCTATATAAATATATAAATATTTATATATTTAT TR:VR 53:4 35:1 chr2 54353600 d_1236 T . Too_small_size END=54353643;SVTYPE=DEL;SVLEN=-43 TR:VR 26:7 17:0 chr3 157866753 d_1637 A . Too_small_size END=157866789;SVTYPE=DEL;SVLEN=-36 TR:VR 80:22 16:0 chr3 195478798 d_1678 G . PASS END=195478993;SVTYPE=DEL;SVLEN=-195;SVINSLEN=81;SVINSSEQ=ATACAGTGAAGTTCCTGTGTGTGATATCACAGTGGTACATATAGTGAAGCTCCTATATATGATACCACAGTGGTAGATACA TR:VR 61:4 14:0 chr4 46361790 r_354 T . PASS END=46380533;SVTYPE=DEL;SVLEN=-18743 TR:VR 56:15 29:0 chr6 29063305 d_1916 C . PASS END=29067785;SVTYPE=DEL;SVLEN=-4480 TR:VR 52:8 19:0 chr6 61511493 i_1402 G . PASS END=61511493;SVTYPE=INS;SVINSLEN=205;SVINSSEQ=TAAACCTTTCTTTTCATTCAGCAATTTGGAAACACTGTTTGGAAATTCATTCAGCAGTTTGGAAAGACTGTTTTTGTAGAATCTATGAAGGGATATTTGGGAGCCCATTGGACCAATGATGAAAAAGTAAATATCTTCATATAAAAACTGAAAAGAAGCTTTCTGAGAAACTGCTTTGTGATGTGCACATTCATCTCACAGAGCT TR:VR 50:6 11:0 chr7 30999838 r_412_0 G G]chr7:117704457] . PASS SVTYPE=BND;MATEID=r_412_1 TR:VR 65:5 31:0 chr7 117704457 r_412_1 T T]chr7:30999838] . PASS SVTYPE=BND;MATEID=r_412_0 TR:VR 65:5 31:0 chr9 6888405 d_2115 A . PASS END=6888826;SVTYPE=DEL;SVLEN=-421 TR:VR 24:11 8:0 chr12 110014879 r_137 G . PASS END=110024043;SVTYPE=DEL;SVLEN=-9164 TR:VR 26:16 21:0 chr12 28267833 d_559 A . PASS END=28267919;SVTYPE=DEL;SVLEN=-86;SVINSLEN=1;SVINSSEQ=A TR:VR 33:8 17:0 chr12 83809470 d_588 T . PASS END=83809526;SVTYPE=DEL;SVLEN=-56 TR:VR 47:10 11:0 chr13 85302057 d_619 T . PASS END=85302118;SVTYPE=DEL;SVLEN=-61 TR:VR 25:10 17:0 chr14 44350272 r_157_0 C C[chr18:78264160[ . PASS SVTYPE=BND;MATEID=r_157_1 TR:VR 51:19 31:0 chr18 78264160 r_157_1 A ]chr14:44350272]A . PASS SVTYPE=BND;MATEID=r_157_0 TR:VR 51:19 31:0 chr16 73179620 r_206_0 T ]chr20:11910324]AGGAGGTTT . PASS SVTYPE=BND;MATEID=r_206_1;SVINSLEN=8;SVINSSEQ=AGGAGGTT TR:VR 103:21 28:0 chr20 11910324 r_206_1 T TAACCTCCT[chr16:73179620[ . PASS SVTYPE=BND;MATEID=r_206_0;SVINSLEN=8;SVINSSEQ=AACCTCCT TR:VR 103:21 28:0 chr2 169299744 r_279 T . PASS END=169314040;SVTYPE=DEL;SVLEN=-14296 TR:VR 51:7 24:0 chr21 43262916 r_315_0 G GTGG]chr21:43337657] . Too_low_VAF SVTYPE=BND;MATEID=r_315_1;SVINSLEN=3;SVINSSEQ=TGG TR:VR 195:4 82:0 chr21 43337657 r_315_1 C CCCA]chr21:43262916] . Too_low_VAF SVTYPE=BND;MATEID=r_315_0;SVINSLEN=3;SVINSSEQ=CCA TR:VR 195:4 82:0 chr3 158732632 d_1638 A . PASS END=158732798;SVTYPE=DEL;SVLEN=-166 TR:VR 77:10 14:0 chr5 168539087 d_1900 A . PASS END=168542442;SVTYPE=DEL;SVLEN=-3355 TR:VR 33:5 20:0 chr6 143964227 d_1966 A . PASS END=143964695;SVTYPE=DEL;SVLEN=-468 TR:VR 35:17 11:0 chr6 61864879 d_1948 A . Too_small_size END=61864915;SVTYPE=DEL;SVLEN=-36 TR:VR 52:19 12:0 chr7 147423286 d_2039 T . PASS END=147423562;SVTYPE=DEL;SVLEN=-276;SVINSLEN=3;SVINSSEQ=GTC TR:VR 48:30 19:0 chr7 32039793 r_413_0 A A]chr7:110836170] . PASS SVTYPE=BND;MATEID=r_413_1 TR:VR 70:6 36:0 chr7 110836170 r_413_1 G G]chr7:32039793] . PASS SVTYPE=BND;MATEID=r_413_0 TR:VR 70:6 36:0 chr1 1718084 i_10 A . PASS END=1718084;SVTYPE=INS;SVINSLEN=265;SVINSSEQ=TGCTTTCAGCGAGTTTGCTCTCTGGTTTTTAGTCTGTGACACACATGCTTTTTAGCTAGAGTTTGCTCTGTACTGGCCCTTCTGGAATGGTCTGTGACACACGCATTGCTCAGCTAGAGTTTGCTCTCTCTGGTTTTTGGTCTGTGACACACGCATCTGCTTTTAGTTAGTTTGCTCTCATAGCCCCTTCTGAACGGTCTGTGACACATGCATACTTTCAGCTATTCTCTCTATAGCCATTCTGGATGGTCTATGACACCTGTAC TR:VR 42:9 12:0 chr1 2670197 d_17 A . Too_low_VAF END=2670288;SVTYPE=DEL;SVLEN=-91;SVINSLEN=11;SVINSSEQ=TCTGACAGCCT TR:VR 355:5 128:0 chr12 29018892 r_125_0 A [chr12:29149636[G . PASS SVTYPE=BND;MATEID=r_125_1 TR:VR 87:6 33:0 chr12 29149636 r_125_1 G [chr12:29018892[G . PASS SVTYPE=BND;MATEID=r_125_0 TR:VR 87:6 33:0 chr14 50132378 r_158_0 A ]chr18:62573245]A . PASS SVTYPE=BND;MATEID=r_158_1 TR:VR 50:15 25:0 chr18 62573245 r_158_1 A A[chr14:50132378[ . PASS SVTYPE=BND;MATEID=r_158_0 TR:VR 50:15 25:0 chr16 73541656 r_207_0 C CAGGC[chr21:32797681[ . PASS SVTYPE=BND;MATEID=r_207_1;SVINSLEN=4;SVINSSEQ=AGGC TR:VR 52:7 17:0 chr21 32797681 r_207_1 A ]chr16:73541656]GCCTA . PASS SVTYPE=BND;MATEID=r_207_0;SVINSLEN=4;SVINSSEQ=GCCT TR:VR 52:7 17:0 chr2 54945239 i_758 C . PASS END=54945239;SVTYPE=INS;SVINSLEN=288;SVINSSEQ=CTCCCATCCCATTCCTCCCTCCCTCATCCCTCCCTACCCCTCCCCTCCCCTCCCCTCTTTCCCCCTCCCCTCTCTCCCCTCCCTCTCTCCTCCTCCCTCTATTCCCTCCCCTTCCCTCCCTCCCCTACCCCTTCCATTCCTCCCTTCCCCCTTCCATTCCTCCCCTTGCTCCCCTTCCCTCCCCCCTCCCCTCCCCCTCCTCCTTCCATGCCTCCCCCTGCCCCCTTCCATACTTCCCCCTGCCCCCTTTCATACTTCCACCCTCCCCACTTCCATGCCTCCCCCTCT TR:VR 49:10 16:0 chr3 159837596 d_1639 C . PASS END=159837644;SVTYPE=DEL;SVLEN=-48 TR:VR 97:34 17:0 chr4 13062222 i_1253 C . PASS END=13062222;SVTYPE=INS;SVINSLEN=311;SVINSSEQ=ATACACACCCGTATGTATACATACATACTTGTATACATACACACCCGTATGTATACATACATACTTGTGTATACATACACACCCGTATGTATACATACATACTTGTGTATACATACACACCCGTATGTATACATACATACTTGTGTATACATACACACTCGTATGTATACATACTTGTATATATACACACCCGTATGTATACATACTTGTATATATACACACCCGTATGTATACATACTTGTATATATACACACCCGTATGTATACATACTTGTATATATACACACCCGTATGTATACATACTTGTATATA TR:VR 26:4 9:0 chr6 62581611 d_1949 A . PASS END=62582732;SVTYPE=DEL;SVLEN=-1121 TR:VR 48:11 23:0 chrX 137164018 d_2275 A . PASS END=137164068;SVTYPE=DEL;SVLEN=-50 TR:VR 48:4 8:0 chr11 50376128 i_244 A . PASS END=50376128;SVTYPE=INS;SVINSLEN=321;SVINSSEQ=TATGTGAATTCACCTCACAGGTTTGAACATATCTTTTGATTCAGCTGTTTCAAAGCAGAGTTTTTGTAGAATCTTCAAAAGGACAAAAAAGTAAATATCTTCAGATTAAGCATGATAGAAGCTATCTGAAAAACTGCTTCATGATGTGCACATTCATCTCACAGAATTAAACCTTTTTTTTATGACCTAGCAGATCAGAAACACTTTTTCTTGTAGAATCTGCAAGGTGATATTTGGGAGCTCATAGAGGCCTATTGTAAAGAAGTTAATATTCCCAGATAAAAACTAGAAAGTACCTCTTTCTGAAACTGTTTGTGATTT TR:VR 41:3 13:0 chr12 29040157 r_126_0 C C]chr12:29041069] . PASS SVTYPE=BND;MATEID=r_126_1 TR:VR 39:9 12:0 chr12 29041069 r_126_1 A A]chr12:29040157] . PASS SVTYPE=BND;MATEID=r_126_0 TR:VR 39:9 12:0 chr12 85640955 r_135 G . PASS END=130138663;SVTYPE=DEL;SVLEN=-44497708;SVINSLEN=19;SVINSSEQ=GATTTTATAGAGATATCTG TR:VR 67:10 32:0 chr13 89412774 d_620 G . PASS END=89412841;SVTYPE=DEL;SVLEN=-67 TR:VR 25:8 16:0 chr17 45583234 r_218_0 C ]chrX:42475113]G . Too_low_VAF SVTYPE=BND;MATEID=r_218_1 TR:VR 121:3 43:0 chrX 42475113 r_218_1 G G[chr17:45583234[ . Too_low_VAF SVTYPE=BND;MATEID=r_218_0 TR:VR 121:3 43:0 chr2 170156474 d_1331 C . PASS END=170156872;SVTYPE=DEL;SVLEN=-398 TR:VR 38:17 11:0 chr2 6452453 d_1226 A . Too_small_size END=6452489;SVTYPE=DEL;SVLEN=-36 TR:VR 16:6 11:0 chr2 90335326 r_273_0 G [chr22:10691586[T . Too_low_VAF SVTYPE=BND;MATEID=r_273_1 TR:VR 101:4 51:0 chr22 10691586 r_273_1 T [chr2:90335326[T . Too_low_VAF SVTYPE=BND;MATEID=r_273_0 TR:VR 101:4 51:0 chr3 105423116 d_1604 T . PASS END=105425376;SVTYPE=DEL;SVLEN=-2260 TR:VR 65:20 24:0 chr5 101830869 r_374 A . PASS END=102903597;SVTYPE=DUP;SVLEN=1072728 TR:VR 62:8 25:0 chr5 170213378 d_1901 A . PASS END=170213432;SVTYPE=DEL;SVLEN=-54 TR:VR 34:6 14:0 chr7 150682070 r_422 G . PASS END=150694504;SVTYPE=DEL;SVLEN=-12434 TR:VR 39:8 17:0 chr9 76316951 d_2120 A . PASS END=76320445;SVTYPE=DEL;SVLEN=-3494 TR:VR 32:10 19:0 chrX 137315114 r_475 T . PASS END=137316227;SVTYPE=DUP;SVLEN=1113;SVINSLEN=1;SVINSSEQ=C TR:VR 46:4 16:0 chr12 11039 i_270 C . PASS END=11039;SVTYPE=INS;SVINSLEN=185;SVINSSEQ=GCCGGCGCAGGCGCAGAGAGGCGCGCCGCGCCGGCGCAGGCGCAGAGAGGCGCGCCGCGCCGGCGCAGGCGCAGAGAGGCGCGCGCGCGCCGGCGCAGGCGCAGAGAGGCGCGCGCGCCGGCGCAGGCGCAGAGAGGCGCGCCGCGCCGGCGCAGAGCGCAGAGAGGCGCGCGCGCGCCGGCGCA TR:VR 119:10 43:1 chr12 29040356 r_127_0 A [chr17:43953398[T . PASS SVTYPE=BND;MATEID=r_127_1 TR:VR 54:9 30:0 chr17 43953398 r_127_1 T [chr12:29040356[T . PASS SVTYPE=BND;MATEID=r_127_0 TR:VR 54:9 30:0 chr13 89727463 d_621 C . PASS END=89727777;SVTYPE=DEL;SVLEN=-314 TR:VR 25:20 14:0 chr14 55834096 r_159 G . PASS END=56482907;SVTYPE=DEL;SVLEN=-648811 TR:VR 27:16 18:0 chr17 46156528 d_1041 G . PASS END=46156650;SVTYPE=DEL;SVLEN=-122 TR:VR 54:12 22:0 chr20 62509070 i_945 T . PASS END=62509070;SVTYPE=INS;SVINSLEN=131;SVINSSEQ=CACCCCTTGTTACCCTCCACCCTCCACCCACCAACCCTCCATTCCTCCACCCCTTCATGCCTCCATCCTCCACCCCTCTAATCTCCACCCCTCCACTCCTCCACCCTTACCTCTCCCACCCCCTCCACCCT TR:VR 47:6 21:0 chrX 137830990 d_2276 A . PASS END=137831489;SVTYPE=DEL;SVLEN=-499 TR:VR 46:7 12:0 chrX 91804930 d_2249 C . PASS END=91804992;SVTYPE=DEL;SVLEN=-62 TR:VR 56:10 15:0 chr10 98156364 d_464 T . PASS END=98156432;SVTYPE=DEL;SVLEN=-68 TR:VR 19:4 17:0 chr12 113704272 r_138_0 C [chr16:8418040[G . PASS SVTYPE=BND;MATEID=r_138_1 TR:VR 78:13 34:0 chr16 8418040 r_138_1 G [chr12:113704272[G . PASS SVTYPE=BND;MATEID=r_138_0 TR:VR 78:13 34:0 chr13 98342562 d_622 T . Too_small_size END=98342606;SVTYPE=DEL;SVLEN=-44 TR:VR 24:5 18:0 chr14 58260087 r_160 T . PASS END=77866857;SVTYPE=DUP;SVLEN=19606770 TR:VR 69:13 27:0 chr17 46231902 r_219_0 G [chr17:46277011[C . Too_low_VAF SVTYPE=BND;MATEID=r_219_1 TR:VR 213:9 48:1 chr17 46277011 r_219_1 C [chr17:46231902[C . Too_low_VAF SVTYPE=BND;MATEID=r_219_0 TR:VR 213:9 48:1 chr20 26344354 i_890 T . PASS END=26344354;SVTYPE=INS;SVINSLEN=514;SVINSSEQ=TGAACATTTGCTTTTCATAGAGCAGTTTTGAAACCCTCTTTTTATAGGATCTGCAAGGGAATATTTGGACAGCTTTGAGGCTTTCGTTGGAAACGAGAATATTTTCACATAAAAACTAGTCAGAAGCATTCTCAGAAACTTATTTGTGATGTGTGCACACAACTCACAGAGTTGAACATTCCTTTTCATACAGCAATTTTGAAACACTCTTTTTCAGAATCTGTAAGTTGTCATTTGGAGCACTTTGAGGCCTTCATTCGAAACGGAAATATCTTCATATAGAAACTAGACAGAAGCATTCTCAGAAACTTCTTTATAATGTGTGTACTCAACTCACAGAGTTAAACCTTTCTTTTGATAGAGCAGCTTGGAAACACTCTTCTTGTAGAATTTACAAGTGGATATAAGGACACCTTTAAGGCTTTCCTTGGACACGGGAATATCTTCACATAAAAACCAGACAGAAGCATTCTCAGAAAATTCTTTGTGATGCTTTCAATCATCTCACAGAGAT TR:VR 66:8 10:0 chr20 62509166 i_946 C . PASS END=62509166;SVTYPE=INS;SVINSLEN=166;SVINSSEQ=CCTCCACCCTCCATCCTCCACCCCTCCACCTCCCACCCCTCCACCCTGCTTCCCTCCCTCCACCCCTCCACCCCTCCACCCGTCCACCCCTCCACCCCTCACCTCCCCACCCTCCACCCCCTCCACCCCACCACCCTCCACCCCTCCACCCTCCACCCCTCCACTC TR:VR 47:7 21:0 chr21 43393314 d_1486 C . PASS END=43393369;SVTYPE=INS;SVINSLEN=119;SVINSSEQ=AGCACGGCCCAGGCAGGTGACGGTGTGTAGACAGCACGGCCCAGGCAGGTGACGGTGTGTAGACAGCACGGCCCAGGCAGGTGATGGTGTGTAGACAGCACGGCCCAGGCCGGTGTCGG TR:VR 27:4 5:0 chr22 22729463 i_1034 A . PASS END=22729493;SVTYPE=INS;SVINSLEN=591;SVINSSEQ=GTTGCAGTCTCACCAATGCACCACAATGTAGCAGTCTCTCTTGTGAGGTATCACGTGGAGTTCTTCATCTCATCACCAAGATGATTAAGGAACAGGGACACCGGGTGAGGTTGGAGTGAAAGTTTAATAAGAAAAAGGAGGAAGCTCTCTGCAGCAGACAAGGGAGTCCAACTGGATTGCCGTTTTTATTGTTGAATCAAAAAGCTTTTATAAGAAACTCCTCTCAGCTCTATATAAAACTGTCTGCACAATTCCCTTTATATATCCAGCTGTGGGTATGTGTCTAGTCAAGCACAAAGTGGGCTTCTCTTGTTTGTATAACTGTGGGTTTGTTTTAGGTAAGCCCCCTCCTCCCTGTGCAAGTTCCCACAGAGACCACCATGTATATGCCTGAAAAAAGGAGGAAAATTTTACCTGGGAGCTTGCCAATTACACAAAGACAGAAGGCATGTGTGCTGGACCTTGCATGCTTATCTGTTCAGGACTTATCTGTAGGTGCAGTAGTTGTGATTTTTCAGGCTGACAGCTTCCCTGAGGACCAGTCTCTTACTTGTTTACTCAACTAATTTTCCTTTCCTTCTCCCTCAACAT TR:VR 29:7 17:0 chr3 197385503 d_1714 T . Too_low_VAF END=197385811;SVTYPE=DEL;SVLEN=-308 TR:VR 92:4 18:0 chr7 49242241 d_1997 T . PASS END=49242651;SVTYPE=DEL;SVLEN=-410 TR:VR 32:15 7:0 chr8 76725550 r_433_0 T TCATTAATACACTCATAATTAATACATAA]chr8:76730561] . PASS SVTYPE=BND;MATEID=r_433_1;SVINSLEN=28;SVINSSEQ=CATTAATACACTCATAATTAATACATAA TR:VR 46:5 21:0 chr8 76730561 r_433_1 T TTTATGTATTAATTATGAGTGTATTAATG]chr8:76725550] . PASS SVTYPE=BND;MATEID=r_433_0;SVINSLEN=28;SVINSSEQ=TTATGTATTAATTATGAGTGTATTAATG TR:VR 46:5 21:0 chr9 79693607 d_2121 A . PASS END=79693830;SVTYPE=DEL;SVLEN=-223 TR:VR 27:19 18:0 chr1 125148152 i_61 C . PASS END=125148152;SVTYPE=INS;SVINSLEN=207;SVINSSEQ=GATGACCATTACATTCGAGTCCATTCAGTGATTCCATTTGATTTCATTCGATGATGATTCCATTTGAGTCCATTCGATGATGCCATTCAAATCCATTCAATGATTATTTCAATTATATTTGATGATGGTTCCATTAGAGTCCATTCATTGTTTCCATTCGAATCCATTCGATGATTTGATAATGATTCCATTCGGGTCCATTTGAAG TR:VR 120:16 56:0 chr1 8276866 i_35 C . PASS END=8276866;SVTYPE=INS;SVINSLEN=191;SVINSSEQ=GTGTGTACACACATACACACACACACATACACACACACACACATACACACACACACACACACACAAACACACATCACACACACACAAACACACATTCATGAACACACACAAACACACACACACCACACACATACACACCACACACACAGTGACACACACACACACACACCACACACATACACACACACATA TR:VR 31:5 12:0 chr14 58261640 r_161_0 A A[chr18:50905324[ . PASS SVTYPE=BND;MATEID=r_161_1 TR:VR 82:14 32:0 chr18 50905324 r_161_1 T ]chr14:58261640]T . PASS SVTYPE=BND;MATEID=r_161_0 TR:VR 82:14 32:0 chr17 46265371 i_561 T . Too_low_VAF;Too_small_size END=46265372;SVTYPE=INS;SVINSLEN=37;SVINSSEQ=TCTTCTCCTTCTTTTCTTCTTCTCCTCCTTCTCCTTC TR:VR 113:3 25:0 chr2 178315247 r_280 C . PASS END=210854890;SVTYPE=DEL;SVLEN=-32539643 TR:VR 49:8 33:0 chr2 76975566 d_1237 T . PASS END=76975683;SVTYPE=DEL;SVLEN=-117 TR:VR 19:8 18:0 chr20 26344744 d_1367 T . PASS END=26344871;SVTYPE=INS;SVINSLEN=128;SVINSSEQ=CTGCAAGTGCACATTTGGAGCGATTTGAGACCTATGGTTGAAAAGTAAATATCTTCACATAAAAAGTAGACAGAAGAATTCTTACAAATTACTTCGTGATGTGTGTACTGAAGTGACAGAGTTAAACC TR:VR 65:8 10:0 chr20 62696768 r_309 T . Too_low_VAF END=62696925;SVTYPE=DUP;SVLEN=157 TR:VR 407:9 34:0 chr22 23272158 d_1538 T . PASS END=23272450;SVTYPE=DEL;SVLEN=-292 TR:VR 21:7 16:0 chr4 135766506 r_360 C . PASS END=136717867;SVTYPE=DEL;SVLEN=-951361 TR:VR 46:5 25:0 chr6 31129290 d_1917 C . PASS END=31129385;SVTYPE=DEL;SVLEN=-95 TR:VR 52:23 11:0 chr6 66918241 d_1952 T . PASS END=66919408;SVTYPE=DEL;SVLEN=-1167;SVINSLEN=5;SVINSSEQ=TTTTT TR:VR 39:8 17:0 chrX 140805984 r_476 G . PASS END=140817747;SVTYPE=DEL;SVLEN=-11763 TR:VR 49:5 32:0 chrX 95182861 r_459 A . PASS END=130804145;SVTYPE=DEL;SVLEN=-35621284 TR:VR 77:6 32:0 chr1 239962356 d_372 A . Too_small_size END=239962396;SVTYPE=DEL;SVLEN=-40 TR:VR 49:21 14:0 chr1 83613169 d_47 G . PASS END=83614095;SVTYPE=DEL;SVLEN=-926 TR:VR 42:8 20:0 chr11 103330973 d_548 A . PASS END=103331086;SVTYPE=DEL;SVLEN=-113 TR:VR 30:10 19:0 chr12 117282622 r_139_0 A A[chrX:139244642[ . PASS SVTYPE=BND;MATEID=r_139_1 TR:VR 89:11 32:0 chrX 139244642 r_139_1 T ]chr12:117282622]T . PASS SVTYPE=BND;MATEID=r_139_0 TR:VR 89:11 32:0 chr16 86431360 d_1005 G . PASS END=86431699;SVTYPE=DEL;SVLEN=-339 TR:VR 14:9 12:0 chr17 47534797 d_1042 G . PASS END=47534869;SVTYPE=DEL;SVLEN=-72 TR:VR 36:9 11:0 chr2 17963873 i_752 C . PASS END=17963873;SVTYPE=INS;SVINSLEN=238;SVINSSEQ=GTGTGTGTGTGCATCCAGGAGAGATGACTGCAGAGGGTGTGTGTGTGTGCGTGTGTGTGTGTGCATCCAGGAGAGATGACTGCAGAGGGTGTGTGTGTGTGTGTGTGTGTGTGCATCCAGGAGAGATGACTGCAGAGGGGTGTGTGTGTGTGCGTGTGTGTGTGCATCCAGGAGAGATGACTGCAGAGGGTGTGTGTGTGTGCATCCAGGAGAGATGACTGCAGAGGGTGTGTGTGTG TR:VR 23:4 10:0 chr3 165468531 r_338 A . Too_low_VAF END=165548158;SVTYPE=DEL;SVLEN=-79627 TR:VR 164:6 29:0 chr3 197466511 r_347 A . PASS END=197489748;SVTYPE=DEL;SVLEN=-23237 TR:VR 99:30 27:0 chr4 13625728 r_349 G . PASS END=13626579;SVTYPE=DEL;SVLEN=-851 TR:VR 34:7 12:0 chr6 151934288 d_1967 T . PASS END=151937251;SVTYPE=DEL;SVLEN=-2963;SVINSLEN=2;SVINSSEQ=GG TR:VR 26:12 13:0 chr6 71847020 r_396 A . PASS END=71862221;SVTYPE=DEL;SVLEN=-15201 TR:VR 67:15 33:0 chr8 88080561 d_2104 G . PASS END=88080615;SVTYPE=DEL;SVLEN=-54 TR:VR 22:5 19:0 chr9 91801839 d_2123 C . PASS END=91802055;SVTYPE=DEL;SVLEN=-216 TR:VR 21:12 3:0 chrX 97116520 r_460 T . PASS END=107754492;SVTYPE=DUP;SVLEN=10637972 TR:VR 95:7 30:0 chr12 117283601 r_140_0 G ]chrX:110315752]T . PASS SVTYPE=BND;MATEID=r_140_1 TR:VR 95:8 27:0 chrX 110315752 r_140_1 T T[chr12:117283601[ . PASS SVTYPE=BND;MATEID=r_140_0 TR:VR 95:8 27:0 chr14 59672817 r_163_0 T ]chrX:151584931]TTAAATGTATGTAAGTACAAAAGATGATAACA . PASS SVTYPE=BND;MATEID=r_163_1;SVINSLEN=31;SVINSSEQ=TTAAATGTATGTAAGTACAAAAGATGATAAC TR:VR 65:9 25:0 chrX 151584931 r_163_1 A AGTTATCATCTTTTGTACTTACATACATTTAA[chr14:59672817[ . PASS SVTYPE=BND;MATEID=r_163_0;SVINSLEN=31;SVINSSEQ=GTTATCATCTTTTGTACTTACATACATTTAA TR:VR 65:9 25:0 chr17 48154236 d_1043 G . PASS END=48154284;SVTYPE=DEL;SVLEN=-48 TR:VR 41:15 13:0 chr2 85801216 r_271_0 G [chr9:130439[T . PASS SVTYPE=BND;MATEID=r_271_1 TR:VR 71:8 32:0 chr9 130439 r_271_1 T [chr2:85801216[T . PASS SVTYPE=BND;MATEID=r_271_0 TR:VR 71:8 32:0 chr22 27978864 d_1539 T . PASS END=27979098;SVTYPE=DEL;SVLEN=-234 TR:VR 23:16 12:0 chr6 152047310 d_1968 T . PASS END=152047822;SVTYPE=DEL;SVLEN=-512 TR:VR 24:8 18:0 chr8 92386687 d_2105 A . Too_small_size END=92386729;SVTYPE=DEL;SVLEN=-42 TR:VR 25:16 24:0 chrX 141853306 d_2278 T . PASS END=141853382;SVTYPE=DEL;SVLEN=-76 TR:VR 36:7 13:0 chr1 178731672 d_347 T . PASS END=178731757;SVTYPE=DEL;SVLEN=-85 TR:VR 50:28 14:0 chr1 89994860 d_48 C . PASS END=89994977;SVTYPE=DEL;SVLEN=-117 TR:VR 27:8 15:0 chr11 10425450 d_497 T . PASS END=10425866;SVTYPE=DEL;SVLEN=-416 TR:VR 26:13 10:0 chr13 100451739 i_367 T . PASS END=100451739;SVTYPE=INS;SVINSLEN=511;SVINSSEQ=CTCTCTTCCTCTCTCTTCCTCTTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCCTCTCTCTCTCTCCTCTCTCTCTCTCTCTCCCTCTCTCTCTCCTCTCTCCTCTCTCTCTCCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCTCCCCTCCTTCTCTCTCTCTCCTCTCCCTCTCTCTCTCCTCTTCCCCTCTCCTCTCTCCCTCTCTCTCTCCCCCTCTCTCTCTCCCTCTTCCTCTCTCTCTCTCTCTTCTCTCTCTCCCTCTTCCTCTCTCTCTCTCCTCTCCTCTCCCTCTCTCTTTCTCCCTCTCTCCTCTCCTCTCCCTCTCTCCTCTCCTCTCTCTCCTCCTCTCCCTCTCTCTCTCTCCTCTCTCCTCTCTCTCTCCTCTTCTCTCCCTCTCTCCTCTCCCTCTCTCTCTCTCCCTCTCTCTCTCTCTCCTCTCCCTCTCTCTCTCCCTCTTCCTCTCTCTCTCCCTCTCTCCTCTCTCTCTCTCCTCT TR:VR 31:10 14:0 chr18 20919153 i_631 T . PASS END=20919153;SVTYPE=INS;SVINSLEN=625;SVINSSEQ=GAAACACTCTTCTTTTTTTTTTTTTATTATACTCTAAGCTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATCTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGCATATCTCCCAATGCTATCCCTCCTCCATCCCCCGACCCCACCACATTCCCCAGAGTGTGACATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTCGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATATTTTCCAATTTCATCCATGTCCCTACAAATGATATGAACACATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGGGCCACATTTCCTTAATCCAGTCTATCATTGTTGGACATTTGGGCTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCACCATGATTTATAGTCCTTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTACTTTACAATCAG TR:VR 66:4 23:0 chr2 183672308 d_1332 A . Too_small_size END=183672348;SVTYPE=DEL;SVLEN=-40 TR:VR 27:7 15:0 chr3 167581050 r_339_0 C [chr6:45516848[T . PASS SVTYPE=BND;MATEID=r_339_1 TR:VR 113:13 30:0 chr6 45516848 r_339_1 T [chr3:167581050[T . PASS SVTYPE=BND;MATEID=r_339_0 TR:VR 113:13 30:0 chr3 24787903 d_1580 T . PASS END=24787960;SVTYPE=DEL;SVLEN=-57 TR:VR 25:14 21:0 chr6 152910162 d_1969 A . PASS END=152910221;SVTYPE=DEL;SVLEN=-59 TR:VR 26:16 15:0 chr6 73307768 d_1954 G . Too_small_size END=73307808;SVTYPE=DEL;SVLEN=-40 TR:VR 51:9 13:0 chr7 56151868 i_1485 C . PASS END=56151868;SVTYPE=INS;SVINSLEN=403;SVINSSEQ=CCCCACCTGGCCAGCCGCCCCATCCGGGAGGGAGGTGGGGGGTCAGCCCCCCGCCCGGCCAGCCACCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCTGGCCACCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCCTTCCGGGAGGGAGGTGGGGGTTGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGTCAGCCCCCCCACCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGGGTCAGCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCACCCCATCCGGGAGGTGGGGGGGTCAGC TR:VR 34:4 15:0 chr8 92516688 r_434 C . PASS END=92627353;SVTYPE=DEL;SVLEN=-110665 TR:VR 20:11 36:0 chr9 96078708 d_2124 T . Too_small_size END=96078745;SVTYPE=DEL;SVLEN=-37 TR:VR 21:9 9:0 chrX 99915485 r_461 C . PASS END=102939937;SVTYPE=DEL;SVLEN=-3024452 TR:VR 97:5 25:0 chr17 49221203 d_1044 G . PASS END=49228330;SVTYPE=DEL;SVLEN=-7127 TR:VR 54:11 13:0 chr2 183894299 d_1333 T . PASS END=183894406;SVTYPE=DEL;SVLEN=-107 TR:VR 21:13 17:0 chr22 34145060 d_1540 T . PASS END=34145110;SVTYPE=DEL;SVLEN=-50 TR:VR 29:20 14:0 chr3 168674251 r_340 A . PASS END=168750811;SVTYPE=DEL;SVLEN=-76560 TR:VR 121:39 35:0 chr3 197517564 i_1175 C . PASS END=197517564;SVTYPE=INS;SVINSLEN=573;SVINSSEQ=TCCCCATCAGTCACTTCCTGCTCTATGGTCTCCATCCCCCCTCAGGCCGACCCCCCCAATCAGTCACTTCCTGCTCTATGGTCTCCATCCCCCTTCAGGCCGACCCCCCCATCAGTCACTTCCTGCTCTATGGTCTCCATCCCCCCTCAGGCCGACCCCCTCATCAGTCATTTCCTGCTCTATGGTCTCCATCCCCCTTCAGGCCGACCCCCTCATCAGTCATTTCCTGCTCTATGGTCTCAATCCCCCTTCAGGCCGACCCCCCCATCAGTCACTTCCTGCTCTATGGTCTCCATCCCCCTCAGGCCGACCCCCCCAATCAGTCACTTCCTGCTCTATGGTCTCCATCCCCCTTCAGGCCGACCCCCCATCAGTCACTTCCTGCTCTATGGTCTCCATCCCCCCTCAGGCCGACCCCCTCATCAGTCATTTCCTGCTCTATGGTCTCCATCCCCCTTCAGGCCGACCCCCTCATCAGTCATTTCCTGCTCTATGGTCTCAATCCCCCTTCAGGCCGACCCCCCCATCAGTCACTTCCTGCTCTATGGTCTCCATCCCCCTTCAGGCCGACTC TR:VR 80:11 6:0 chr5 10493 i_1293 T . PASS END=10493;SVTYPE=INS;SVINSLEN=365;SVINSSEQ=CACCCTAACCCTCACCCTCACCCTCACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTCACCCTAACCCTCACCCTCACCCTAACCCTCACCCCAACCCTAACCCTCACCCTAACCCTAACCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACCCTAACCCTAACCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACCCCTGACCCTGACCCTGACCCTGACCCTGACCCTGACCCTGACCCTGACCCTTGACCCCCGACCTGACCCCGACCCCCGACCCTGACCTCCCTGACTCCCCGACCCCCGACCCCGACCCCGACCCCGACCCGAACTCCTAACCCGA TR:VR 57:5 23:0 chr6 74364901 r_397_0 G G]chr6:97614319] . Too_low_VAF SVTYPE=BND;MATEID=r_397_1 TR:VR 90:4 24:0 chr6 97614319 r_397_1 A A]chr6:74364901] . Too_low_VAF SVTYPE=BND;MATEID=r_397_0 TR:VR 90:4 24:0 chrY 56836640 d_2340 T . Too_low_VAF END=56836748;SVTYPE=DEL;SVLEN=-108;SVINSLEN=1;SVINSSEQ=G TR:VR 604:4 319:0 chr1 92121839 r_23_0 T TGCCCATTTATG]chr2:230881513] . PASS SVTYPE=BND;MATEID=r_23_1;SVINSLEN=11;SVINSSEQ=GCCCATTTATG TR:VR 72:8 29:0 chr2 230881513 r_23_1 C CCATAAATGGGC]chr1:92121839] . PASS SVTYPE=BND;MATEID=r_23_0;SVINSLEN=11;SVINSSEQ=CATAAATGGGC TR:VR 72:8 29:0 chr10 14808600 r_66_0 G [chr16:87726656[C . PASS SVTYPE=BND;MATEID=r_66_1 TR:VR 52:4 30:0 chr16 87726656 r_66_1 C [chr10:14808600[C . PASS SVTYPE=BND;MATEID=r_66_0 TR:VR 52:4 30:0 chr12 119256523 r_141 T . PASS END=119267348;SVTYPE=DEL;SVLEN=-10825 TR:VR 30:18 29:0 chr13 103471433 d_623 A . PASS END=103472571;SVTYPE=DEL;SVLEN=-1138 TR:VR 25:5 11:0 chr15 20599338 r_184 C . PASS END=20620736;SVTYPE=DEL;SVLEN=-21398 TR:VR 50:4 22:0 chr2 186356817 r_281 C . PASS END=186646372;SVTYPE=DEL;SVLEN=-289555 TR:VR 44:16 28:0 chr2 91507533 i_840 T . Too_low_VAF END=91507533;SVTYPE=INS;SVINSLEN=289;SVINSSEQ=GGCTTGGCAGGCTGGCTGGTTGGGTGGCTTAGCTGGCTGGCTGGCTGTCTGGGTCGCTTGACGGCTTGGCTGGCTGGCTTGGCTGGCTTGGTTTGCCAGGCTGGAGTGCAATGGTGCAAACTTGGCTAGCTGCAGCCTCCACCTCCTGTGTTCAAGTGATCCTCCTGCGTTGGCCTCCCGAGTAGCTGGGATTAGAGATGAGTGCCACCACGCCCATCTATTTTTTTTGGCTATTTAGTGGAGACGTTGTTTCACCATGTTGGCCAGGCTGGTGTTTCATTTTCTTCAA TR:VR 181:6 74:1 chr20 63499218 r_310_0 G ]chr3:162998167]A . Too_low_VAF SVTYPE=BND;MATEID=r_310_1 TR:VR 108:3 32:0 chr3 162998167 r_310_1 A A[chr20:63499218[ . Too_low_VAF SVTYPE=BND;MATEID=r_310_0 TR:VR 108:3 32:0 chr3 169217926 d_1644 T . PASS END=169218124;SVTYPE=DEL;SVLEN=-198;SVINSLEN=13;SVINSSEQ=GATGAGTGAGAAA TR:VR 78:13 16:0 chr3 197581914 i_1176 C . PASS END=197581915;SVTYPE=INS;SVINSLEN=176;SVINSSEQ=AAGCCCATCTTTCCTGGGGTCAGCCACTCCTATCTATGCCCATCTTTCCTGGGGACAGCCACTCCTATCCACTTCATCTTTCCTGGGGACAGCCACTCCTATCCACGCCCATCTTTCCTGGGGTCAGCCACTCCTATCCACGCCCATCTTTCCTAAGGGTCAACCACTCCTATCCA TR:VR 71:15 15:0 chr5 50249532 i_1341 G . PASS END=50249532;SVTYPE=INS;SVINSLEN=575;SVINSSEQ=TGGAAGTCAGTGTGGCGATTCCTCAGGATCTAGAACTAGAAATACCATGAGATCTAGAACTAGAAATACCATTTTACCCAGCCATCCCATAACTGGATGTATATCCAAAGGCTTATAAATCATGCTGCTATAAAGACACATGCACACTTATGTTTAGTGCGGCACTATTTACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAACAATAGACTGGATTAAGAAAATGTGGCAGATATACATCATGGAATACTATGCAGCCTTAAAAAATGATGTGTTCATGTCCTTTGTAGGGACATGGATGAAACTGGAAACCATCATTCTCAGCAAACTATCACAAGCACAAAAAACCAAACACCGCATGTTCTCACTCAAGGTCGGAATTGAACAATGAGAACACATGGACACAGGATGGGGAACATCACACTCCAAGACTGTTGTGGGGTGGGGGGAGGGGGTGAGGGATAGCATTAGGAGATATACCTAATGCTAAATCACGAGTTAATGGGTGCAGCACTCCAACATGGCACATGTATACATATGTAACAAACCTGCACATTGTGCGCATGTA TR:VR 43:4 9:0 chrUn_GL000214v1 85777 r_444_0 C [chrUn_KI270751v1:19246[A . Too_low_VAF SVTYPE=BND;MATEID=r_444_1 TR:VR 93:3 41:0 chrUn_KI270751v1 19246 r_444_1 A [chrUn_GL000214v1:85777[A . Too_low_VAF SVTYPE=BND;MATEID=r_444_0 TR:VR 93:3 41:0 chr1 181513864 r_46_0 C [chr1:181514598[A . PASS SVTYPE=BND;MATEID=r_46_1 TR:VR 58:10 15:0 chr1 181514598 r_46_1 A [chr1:181513864[A . PASS SVTYPE=BND;MATEID=r_46_0 TR:VR 58:10 15:0 chr1 92852253 r_24 C . PASS END=107528129;SVTYPE=DEL;SVLEN=-14675876 TR:VR 35:5 26:0 chr10 15938420 d_396 T . PASS END=15939075;SVTYPE=DEL;SVLEN=-655 TR:VR 40:11 23:0 chr14 101701897 d_675 A . PASS END=101703492;SVTYPE=DEL;SVLEN=-1595 TR:VR 37:15 10:0 chr14 62758160 i_405 A . PASS END=62758165;SVTYPE=INS;SVINSLEN=278;SVINSSEQ=AAAAAAAAAAAAAAAAGATATCCTGTTCGTTGCAACAACATAAATGGAACAGAAAGTTATTTATTTCCAATATGGATGGAACAGAAGGTGATTATGTTAAGTGAAATAATTCAGGCACAGAAAGACAATCATCACATATTCTCGCTTATTTGTGGGATCTAAAAATGAAAACAATTGAATTCACAAAGAGACAGAGTATAAAAATGGTTACTAGTGGCTGAGAAGGGTAGTGGTGGGGATGAGAGGGCAGGTGGGAATGGTTAGTGGGTACAAAAAAA TR:VR 37:4 11:0 chr16 36126301 d_963 T . PASS END=36126286;SVTYPE=INS;SVINSLEN=86;SVINSSEQ=GGAATAGAATGGAATCATCATCAAATGGAGTCAAATGGAAACATCTAAAGGACCCAAATAAAATCATCTTTGAATGGAATAGAATG TR:VR 48:6 15:0 chr4 177994185 d_1788 G . Too_small_size END=177994221;SVTYPE=DEL;SVLEN=-36 TR:VR 20:17 18:0 chr1 181514188 d_348 A . PASS END=181514266;SVTYPE=DEL;SVLEN=-78 TR:VR 55:10 15:0 chr1 240917647 d_373 A . PASS END=240917819;SVTYPE=DEL;SVLEN=-172 TR:VR 56:11 21:0 chr1 93940093 r_25 C . PASS END=181514521;SVTYPE=DUP;SVLEN=87574428 TR:VR 63:10 30:0 chr11 110612394 d_549 C . PASS END=110613269;SVTYPE=DEL;SVLEN=-875 TR:VR 28:14 16:0 chr12 120424961 r_142_0 G G]chr7:14243987] . PASS SVTYPE=BND;MATEID=r_142_1 TR:VR 56:6 25:0 chr7 14243987 r_142_1 A A]chr12:120424961] . PASS SVTYPE=BND;MATEID=r_142_0 TR:VR 56:6 25:0 chr13 108296077 d_625 G . PASS END=108299441;SVTYPE=DEL;SVLEN=-3364;SVINSLEN=41;SVINSSEQ=ATAATCTTGAGGATTATTACCTTTATATTCATGGTTGATTC TR:VR 25:11 14:0 chr16 3964295 r_191_0 G [chr16:21570192[G . PASS SVTYPE=BND;MATEID=r_191_1 TR:VR 90:6 44:0 chr16 21570192 r_191_1 G [chr16:3964295[G . PASS SVTYPE=BND;MATEID=r_191_0 TR:VR 90:6 44:0 chr19 37098045 r_255 A . PASS END=37248961;SVTYPE=DEL;SVLEN=-150916 TR:VR 59:9 20:0 chr2 196515804 d_1334 T . PASS END=196515909;SVTYPE=DEL;SVLEN=-105 TR:VR 24:10 15:0 chr22 43079226 i_1037 C . PASS END=43079226;SVTYPE=INS;SVINSLEN=132;SVINSSEQ=ACACCCCTCACACCCACAGACACGGGGACCACGGGAGCCGCACCCCAGGAAGCGTGAGCCCATCCCACACCCCTCACACCCACAGACACGGGGACCACGGGAGCCGCACCCCAGAAGCGTGGGCCATCCCAC TR:VR 17:5 13:0 chr3 39174021 r_329 T . PASS END=39536197;SVTYPE=DUP;SVLEN=362176;SVINSLEN=1;SVINSSEQ=C TR:VR 51:9 28:0 chr6 74364933 r_398_0 T [chr6:97607098[TGGGTTGC . Too_low_VAF SVTYPE=BND;MATEID=r_398_1;SVINSLEN=7;SVINSSEQ=TGGGTTG TR:VR 87:4 27:0 chr6 97607098 r_398_1 C [chr6:74364933[CAACCCAC . Too_low_VAF SVTYPE=BND;MATEID=r_398_0;SVINSLEN=7;SVINSSEQ=CAACCCA TR:VR 87:4 27:0 chr8 1709220 r_426_0 C C]chr8:63719027] . PASS SVTYPE=BND;MATEID=r_426_1 TR:VR 74:8 31:0 chr8 63719027 r_426_1 T T]chr8:1709220] . PASS SVTYPE=BND;MATEID=r_426_0 TR:VR 74:8 31:0 chrUn_KI270757v1 66358 i_1665 C . Too_low_VAF END=66358;SVTYPE=INS;SVINSLEN=152;SVINSSEQ=CATCATAGGCCTCAAAGTGTTCAAATTATCCACTTGCAGATTCTACAAAAGAATGGCAATCATTAAAAAGTCAGGAAACAAGAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAAC TR:VR 237:3 110:0 chrX 143848073 r_477 A . PASS END=144002206;SVTYPE=DEL;SVLEN=-154133 TR:VR 73:6 34:0 chr1 181990393 i_102 G . PASS END=181990393;SVTYPE=INS;SVINSLEN=68;SVINSSEQ=AGAATGTTTTTTGTTGTTTGCTTCCCTGGGTGACATATGCCTATATATACATTTTAGGGGGAATGTAT TR:VR 37:25 17:0 chr1 241760013 d_374 C . PASS END=241760146;SVTYPE=DEL;SVLEN=-133 TR:VR 43:8 11:0 chr10 19105744 d_397 A . PASS END=19106111;SVTYPE=DEL;SVLEN=-367 TR:VR 41:10 15:0 chr12 120425011 r_143_0 A [chr7:14244008[CAACATGGTGAAACCTGGG . PASS SVTYPE=BND;MATEID=r_143_1;SVINSLEN=18;SVINSSEQ=CAACATGGTGAAACCTGG TR:VR 56:7 25:0 chr7 14244008 r_143_1 G [chr12:120425011[CCAGGTTTCACCATGTTGG . PASS SVTYPE=BND;MATEID=r_143_0;SVINSLEN=18;SVINSSEQ=CCAGGTTTCACCATGTTG TR:VR 56:7 25:0 chr13 108831421 r_150 G . PASS END=108840077;SVTYPE=DEL;SVLEN=-8656 TR:VR 32:26 16:0 chr14 68081238 d_657 T . PASS END=68081561;SVTYPE=DEL;SVLEN=-323 TR:VR 33:10 12:0 chr16 4384344 r_192 T . PASS END=13340731;SVTYPE=DUP;SVLEN=8956387 TR:VR 69:7 24:0 chr17_GL000205v2_random 31649 i_598 A . Too_low_VAF;Too_small_size END=31649;SVTYPE=INS;SVINSLEN=49;SVINSSEQ=ACATTCGGACCTCAGCAGCAGCATTCTAGAATCCTATATGAGGCACATT TR:VR 139:5 53:1 chr18 22204416 r_229 C . PASS END=22231675;SVTYPE=DEL;SVLEN=-27259;SVINSLEN=133;SVINSSEQ=TTCCTCCCTTCCTTCTTCCCTTCCCTTTCCCTTCCTTCCTTCCTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCGCTCTCTCTTCCTCCCTCCCTCTCTTTCTCTCTCTTTCTC TR:VR 60:10 29:0 chr2 197467692 d_1335 A . Too_small_size END=197467728;SVTYPE=DEL;SVLEN=-36 TR:VR 23:5 13:0 chr5 107832297 r_375 G . PASS END=107847547;SVTYPE=DEL;SVLEN=-15250 TR:VR 40:10 32:0 chr5 51766209 r_368_0 A [chr5:51772250[T . PASS SVTYPE=BND;MATEID=r_368_1 TR:VR 65:6 23:0 chr5 51772250 r_368_1 T [chr5:51766209[T . PASS SVTYPE=BND;MATEID=r_368_0 TR:VR 65:6 23:0 chr9 101438684 d_2125 A . Too_small_size END=101438725;SVTYPE=DEL;SVLEN=-41 TR:VR 23:15 19:0 chrX 102871876 r_462 G . PASS END=138534551;SVTYPE=DUP;SVLEN=35662675 TR:VR 76:10 28:0 chrX 144170288 r_478 T . PASS END=146440333;SVTYPE=DEL;SVLEN=-2270045 TR:VR 51:3 23:0 chr1 182519743 d_349 T . Too_small_size END=182519778;SVTYPE=DEL;SVLEN=-35 TR:VR 48:10 10:0 chr1 24186861 r_6 A . PASS END=24198017;SVTYPE=DEL;SVLEN=-11156 TR:VR 45:10 15:0 chr10 102449142 d_465 G . Too_small_size END=102449177;SVTYPE=DEL;SVLEN=-35 TR:VR 28:8 1:0 chr11 113109067 d_550 G . PASS END=113110927;SVTYPE=DEL;SVLEN=-1860;SVINSLEN=4;SVINSSEQ=TGCG TR:VR 27:9 15:0 chr14 71417495 d_658 A . PASS END=71417558;SVTYPE=DEL;SVLEN=-63 TR:VR 23:12 14:0 chr16_KI270728v1_random 1522084 d_1006 C . PASS END=1523394;SVTYPE=DEL;SVLEN=-1310 TR:VR 27:13 19:0 chr18 24342928 d_1111 A . PASS END=24343560;SVTYPE=DEL;SVLEN=-632 TR:VR 33:8 24:0 chr2 200999877 d_1336 G . PASS END=201001037;SVTYPE=DEL;SVLEN=-1160 TR:VR 18:5 12:0 chr20 63925823 r_311_0 T TTCA[chr3:162999979[ . Too_low_VAF SVTYPE=BND;MATEID=r_311_1;SVINSLEN=3;SVINSSEQ=TCA TR:VR 113:4 29:0 chr3 162999979 r_311_1 T ]chr20:63925823]TGAT . Too_low_VAF SVTYPE=BND;MATEID=r_311_0;SVINSLEN=3;SVINSSEQ=TGA TR:VR 113:4 29:0 chr5 52269317 r_369_0 G G]chr5:52270380] . PASS SVTYPE=BND;MATEID=r_369_1 TR:VR 53:7 17:0 chr5 52270380 r_369_1 G G]chr5:52269317] . PASS SVTYPE=BND;MATEID=r_369_0 TR:VR 53:7 17:0 chr7 156457550 d_2043 C . Too_small_size END=156457588;SVTYPE=DEL;SVLEN=-38 TR:VR 39:6 15:0 chrX 102968947 r_463_0 T T]chrX:137872780] . PASS SVTYPE=BND;MATEID=r_463_1 TR:VR 90:15 33:0 chrX 137872780 r_463_1 A A]chrX:102968947] . PASS SVTYPE=BND;MATEID=r_463_0 TR:VR 90:15 33:0 chrX 146155697 d_2283 A . PASS END=146155932;SVTYPE=DEL;SVLEN=-235 TR:VR 29:18 14:0 chr1 185945369 d_350 A . PASS END=185945558;SVTYPE=DEL;SVLEN=-189 TR:VR 38:5 29:0 chr12 122373151 r_144 G . PASS END=122697708;SVTYPE=DEL;SVLEN=-324557 TR:VR 41:9 26:0 chr14 104208906 i_413 G . PASS END=104208906;SVTYPE=INS;SVINSLEN=456;SVINSSEQ=CAGAGCCGGGACACCACCAGGGCCGGGACACCACCAGAGCTGCGAGACCACCAGGGCCGGGACACCACCAGAGCCGGGACACCACCAGAGCCGGGACACCACCAGAGCTGGGACACCACCAGAGCTGCGAGACCACCAGAGCCGTGACACCACCAGAGCCGTGACACCAGCAGAGCTGGGACACCACCAGAGCTGTGAGACCACCAGAGCCGGGACACCACCAGAGCCGGGACACCACCAGAGCTGCGAGACCACCAGAGCCGTGACACCAGCAGAGCTGGGACACCACCAGAGCCGGGACACCACCAGAGCCGGGACACCACCAGAGCTCCGAGACCACCAGAGCTGCCACACCACCAGAGCTGTGACACCACCAGAGCCGTGACACCACCAGAGCCGGGACACCACCAGAGCTCCGAGACCACCAGAGCTGCCACACCACCAGAGCTGTGACAC TR:VR 47:6 8:0 chr14 72482971 r_164_0 G ]chr5:151840457]G . PASS SVTYPE=BND;MATEID=r_164_1 TR:VR 56:4 35:0 chr5 151840457 r_164_1 G G[chr14:72482971[ . PASS SVTYPE=BND;MATEID=r_164_0 TR:VR 56:4 35:0 chr16_KI270728v1_random 1787941 d_1007 A . PASS END=1788632;SVTYPE=DEL;SVLEN=-691 TR:VR 24:3 17:0 chr3 171056815 r_341 T . PASS END=171067495;SVTYPE=DEL;SVLEN=-10680;SVINSLEN=1;SVINSSEQ=A TR:VR 135:8 27:0 chr3 52009132 d_1581 C . PASS END=52009298;SVTYPE=DEL;SVLEN=-166 TR:VR 20:8 13:0 chr5 53377892 r_370 C . PASS END=94894028;SVTYPE=DEL;SVLEN=-41516136 TR:VR 35:5 27:0 chr6 74364901 i_1408 G . PASS END=74364932;SVTYPE=INS;SVINSLEN=7215;SVINSSEQ=TAAGGTCAAGAACATGAGAAGGATGCTCACTTTCACCACCGTTGTTCAACATAGTACAAGAAGTCCTAGCTGTAGCAATTAGACAAGAGAAAGAAATAAAGGGCATCCAAATTGGAAATGAAGAAATCAGATTATCTCTGTTTGCAGATGATGGAATCTTATATTTGGAAAAGCAAAGACTCCACAAAAAAAACTATTAGAATGAATAAAATTCAGTAAAGTTGCAGAATACAAAATCAACATACAACAATCAGTAGCATTTCTATATGCCAATAGCTAACATTGTGAAAAAGACATCAAAAAGTAATTCCATTTATAATAGCGACAAATAAAATAAAATGCCTAGGAATTACTTAACCAAAGAAGTAAAAGATCTCTGGAATAAAAACTATAAAACACTAATGCAAGAAATTGAAGAAGACACCAACAAATGGAAAGATATTCCATCTTTAAAGATTAGAAGAATCAATAGTGTTAAAATGGCCACACTACCCAAAGCAATCTATAGATTTAATGTAATTTCTATCACAACACCAAAGACATTCTTCACAGAAATAGAAAAAACAGTCCTAAACTTTATATGGAACCACAAAAGACCTGAAATAGCCAAAGCTATTCTGAGCAAAAAGAACAAAACTGAGGGAATCACTTTACCTTACTTTAAATTATACTGTGGAGCTGTAGTAACCAAAACAGCAAGGAACCAACATAAATACAGACACATAGATCAGTGGAACAGAATAGAGAACCGACAGATAAAACCCAAACATTTACAGTAAACTCATTTTTGACAAAGGTGCCAAGAACACACATTGGGAAGAGAAACTGTCTCTTCAATAAATATTGCAGAGAAAACTGGATTTGAAGAAGAGTGAAACAAGACCCCTATTTCTTGCTTAAAATCACAATGGATGAAAGACTTAAATTTTAGACCTCAAACTATGAAACCACTAAAAGAGAACATTGGGAAAACCCTCCAGGACCTTGGTTTGGGCAAAGACTTCTTGGGTAATACTCCACAAGCACAGGCAACCAAAGCAAAAATGGACAAATGGCATCACATCAAGTTAAAAACCTTCTGCACAGCAAGGGAAACAATCAACAAAGTGAAGAGACAACCCACAGAATAAAAGAAAATATTTGCAAACTTCCCATCTGACACATGATTAATAACCAGAATATACAAGGAACTCAAACAATTCTATAGGAAAATATCTAACAATCCAATATTTTAAATGGGCAAAAAATCTGAATAGACATTTCTCACAAGAAGACATACAATGGCAAACAGATATATGAAAAGGTGCTCAAAATCATTGATCATCAGAGAAATACAAATCAAAACTACAATGAAATATCATCTCACCCCAGTTAAAATGGCTTATATGCAAAAATCCAGGCAATAACAAATGCTGGTGAAGATGTGGAGTAAAGGGAACCCTGGTACAATGTTAGTGGAAATGTAAATCAGTACAACCACTATGGAGAAGAGTTTGGAGGGTCCTCAAAAAAAATTTGAAATAGTTGATTTCCCCTGGTTGGCAAGATGGTCAAATAGGAACGGCTCTGGTCTGCAGTTCCCAGTGAGATCAATGCAGAAGGCAGGTGATTTCTGCATTTCCAACTGAGGTAACCAGCTCATCTCACTGGAACTGGTTAGACAGTGGGTGCAGCCAACGGACGGCAAGCCAAAGCAAGGTGGGGCATTGCCTCACTTTAGAAGTGCGAGGGGTCAGGGAACTCCCTTCCCTCACCAAGGGAAGCTGTGAGGGACCCTGCCCAGCCTGGATACTACAATTTTCCCACAGTCTTCGCAACTCGCAGACCAGGAGATTCCTCAGGTACCTATGCCAACAGGGCCCTGGGTTTCAAGCACAAAACGGGGCGGCTGTTTGGGCAGACAGTGAGCTAGCTGCAGGAATTTTTCTTTCACACCCCAGTGGCACCTGGAACACCAGCAAGACAGAAACATTCACTCACCTGGAAGGGGGCTGAAGCCAGGGAGCCAAGTGGTCTAGCTCCAGTGGATCCCACCCCTATGGAGCCCAGCAAGCTAAGATCCAATGCTTGAAATTCTTGCTTCCAGCACAGCAGTCTGAAGTCTGAAGAAAAATACTCATTTTATGATGCCAGCATCATCCTGATACCAAAACCTGGCAGAGACACAACAAAAAAAGAAAATTTCAGGCCAATATCCTTGATGAACATCAATGCGAAAATCCTCAATAAAATACTGGCAAACTGAAACCAGCAGCACATCAAAAAGCTTATCCACCACGATCAACTCAGCTTCATCTCTAGGATGCAAGGCTGGTTCAATGTGCACAATTAATAAACGTAATCCATCACATAAACGGAACCAGTGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAGGCCTTCGATAAAATCCAACAACCCCTTCATGGTAAAAAAAAAAACTCTCAATAAACTACACATTGATGGAACATATCTCAAAATAGTAAGACCTATTTATGACAAACCAACAGCCAATATCATACTGAATGGGCAAAAGTTGGAAGCATTCCCTTTGAAAACCAGCACAAGAAAAGGATGCCCTCTCTCACTGCTCCTATTCAACATAGTAGCTATACAGACCAATGGAAAAGAACATATGGATTTTGTTTTTAATCCTGTTTACATGGTGAATCACATTTATTGATTTACATATGTTGAACCAACCCTGTATCTTGGGAATGTAGCCTACCTAATCATGGTGAATTAAGTTTCTGTTGTGCTATTGAATTTGGTTTGCTAGTATTTTGTTGATGTCTCTCTCTTTTTGATTCAGTTTTGGTGCAGTGTATGTATCTAGAAATTTATTAATTCCTTTAGGTTATCTAATTTTTTGGCATATAATTATTCATAATAATCCCTTATGGGCCCTTTTAAATTTCTGAAGCACCCACTGTTATGTTTCCTTTTCAGTTTTATTTGAGTCTTCTCTCTTTTTTTCTTAGTCTAGCTAAGAGTTTGTTGATTTTATCTTTAAAATCACATAACATAATGACCTCCAGTTCCAGCCATATTGTTGCAAATGACAGGATCTCATTATTTTCTGTCTGAGCAATACTCTATTGTGTATATCTATCACACTTTCTTTATCCAAGAGTCCTTTATGATAAAAAAAAAATTTTCAAGAAACTAGGCATTGAAGAAACATACCTCGAAATAATTAGTGCCATGTATGTAAAAGTAACAGTCATCAGTGAAGAATTTTTTATATAGTGAAACTAAACTTCATAAATGAAGGAAAAATACAGTCTTTTTCAGACAAACAAATGCTGAGAGAATTTGCCACTATTAAGCCAGCAACACAAGAACTGCTAAAAGGAGCTCTAAATCTTAAATCAAATCTTCAAAATACACCAAAATAGAATTTCTTTAAAGCATACATCTCACAGGACTTATAAAACAAAAACACAATGAAAAAAAGGTATTCAAGCAACAAAGAGCATGATGAATAGAATAGTACCTCACATCTCAATAGGAACATTGAATGTAAATTGCCTAAATGCTCCACTTAAAAGATACAGAATGGCAGAATGAGTAAGAATTCACCAACCAAGTATCTGCTGTCTTCAAGAGACTCGCCTAACAAGTAAGGGCACATGTAAAGTTAAAGGGGTAGAAAAAGATATCCATAAAAATGGACACAAAAGCGAGCAGGAGTCACTATTTTCATATCAGACAAAACAAACTTTAGAGCAACAGCAATTTAAAAAGACAAAGAGAGGCATTTTATAATGATAAAATAACTTGTCCAACAGGAAAATATCACAATCCTAAATATATATGCACCTAACACTGGAACTCCCAAAATTATAAAACAAATACTACTAGACCCAAGAAATGAGACAGAGAGCAACATGATAATAATGGAGGACTTCAATAGTGACAGTACGAGACAGGTCAAGACAGAAAGTGAACAAAGAAACAACGAATTTAAATTATACCATATAACAAATGGACTTAACAGATATTTATAGAACATTTTACCCAACAACTGCAGAATATACATTCTATCCATCAGCACATGGAACATTCTCCAAGATAGACCACCAAGATAGACAATATGATAGGCCACAAAGCAAGTCTCAATAAATTTAAGAAAATTAAAATTATATTAAGGACTCTCTCAGACCACAGTCGGATAAAATTAGAAATCAACTCCAAAAGGAACCCACAAAACCATGCAAATACATGAAAATTAAATAACCTGCTCCTGAATGATCATTGAGTCAACAATGAAATTAAGATGGAAATTTAAAAATTCTTTGAACTGAATAATTGTGACACAACCTAACAAAACCTCTGGAATAAGCAAAGACAGTGTTAGGAGGAGGGTTCATAGCCTTAAATGCCTACATCAAAAAGTCTGAAAGAATGCAAATAGATAACCTAAGGTCACACCTCACAGAACGGGAGAAACAAGAACAAACCAAACCCAAACCCAGCAAAAAAAAAGAAATAACAAAGATCAGAGCAGAACTAAATGAAATTGAAACCAAAAAAATACAAAAGATAAATGAAACAAAAAACTGATTCTTTGAAAAGATAAATAAAATTGATAGACCATTAGTGAGATTAACCAAGAAAAGAAGAGAGAAGATTCAAATAAGCGAAATGGGAGATATTACAACTGATACAAGAGAAATACAAAAGATCATTCAAGGATACTGTAAATACCTTTACACAGATAAACTGAGACCTAGAGGAGAGTGATAAATTCCTGAAAATATACAGCCCTCCTAGATGTAAAAAGAAAGAATGGAAACTCTGAACAGACCAATAACAAGCAGCAAGATTGAAATGGTAATAAAAAAAAATTGCCAAGAAAAAAAAAGTCCAGAACCAGATGGATTCACAACTGAATTACATAAGACATTCAAAAAAGAACTGGTACCAGTCATACTGACACTATTCCACAAGATAGAGAAAAAGGGAATATTCCCTAAGTCATTCTATTAAGCCAGTATCACCCTACTACCAAAACAAGGAAATGACATAACAAAAAAAGAAAACCACAGAACAATATCCGTGATGAATATAGAGGCAAAAATCCTTAAGAAAATACTAGCTAACCAAATCCAACAGCGTATCAAAAAGATAATCCACCATGATCAAGTGGGTTTCATACCAGGATGCAAGGATGGTTTAACATACACAAGTAAGTAAATGTGATACACCAGATAAACTGATTATTTTTAAAAAATCACATAATCATCTCAATAGACACAGAAAAAGAATTTGACAAAATCCAGCATCCCTTTATGAATAAAACCCTCAGCAAAATCAGCATCTAAGGAATATAACTTAATGTAATAAAAGCCATCTATAAAAAACCCACAGCCAACATAATATTAAATGGAGAAAAGTCAAAAGCATTCCTCCTGAGAACTGGAACAAGACAAGGATGCCCACTCTCACAACTTCTATTTAACATGGCACTAGAAGTCCTAGTCAGAGCAATCAGACAAGAGAAAGAAATAAAGGGCATCAAAATCGATAAAGAGGAAGTCAAACTGTTGCTGTTCGCTGATCATATGATTGTATAACTAGAAAACCCTAAAGATTCATCCAAAAAGCTGCTAGAACTGATAAATGAATTCAGCAAACTTTCAGGAAACAAAATTAATATACACTAATCTGTAGCTCTGCTATACATGAACAGTGACCAAGCTGAGAATCAAATCAAGAAGTAGACCCCTTTTACAATAGCTGCAAAATAAAAAAATACTTAGGAATATACCTAACCAAGGAGGCGAAACACCTCTACAATGAAAACTACAAAACCCTGCTGAAAGAAATCATAGATGATGCAACAAATGGAAACACATCCCATGCTCATGGATGGGTAGAGTCAATATTGTGAAAATGACCATACTGCCAAAAGCAATCTACAAATTCAATGCAATTCCCATCAAAATACCACCATCCTTCTTCACAGATCTAGAAAAAAAATCCTAAAATTCATATGGAACCAAAAAATAGCCCACATAGACAAAGCAAGATTAAGCAAAGTGAATAAATCTAGAGGCATCACATTATTCAACTTCAAACTATACTATAAGGCCATAGTCACCAAAACAGCATGGTACTGGTATAAAAATAGGCACAGAGACCAATGGAACAGAATAGAGAACCCAGAAATAAACCTAATACTTATAGCCAACTGATCTTTAACAAAGCAAACAAAAACATAAAGTGGGAAAAGGACACCCTATTCAACAAATGGTGCTGGGATAACTGGTAAGCCACATGTAGAAGAATGAAATTGGATCCTCATTTCTCACCCTATACAAAAATCAACTCAAGATTGATCAAAGACTTAAATCTAAGACTTGAAACCATAAAAATTCTAGAAGATAACATCAGGAAAAATCCTTTTAGACATTGGCTTAGGCAAAGACTTCATGACCAAGAACCCAAAAGCAAATGCAACAAAAACAAAGATAAATAGATGGGACTTAATTAAACTAAAAAGCTTCTACACAGCAAAAGAAACAATCAGCAGAGTAAACAGACAACCCACAGAGTGGGAAAAAATCTTCACAATCTATACAGCCAACAAAGGACTAATGTCCAGAATCTACAAGAAACAAACAAATTAGCAAGAAAAAAATCCCATCAAAAAATGGTCTAAGAACACTAACTGACAATTATAAAAGAAGATATACAAATGGCCAATAAATATATGAAACAATGCTAACCATCAGTAGTGATCAGGGAAATGCAAGGCAAAACCACAATGTGATACCACCTTACTTCTGCAAGAATGACCATAATAAAATAATAATAATAACAGATGTTGGCATGGATGTGATGAGAAAAGGAACACTTTTCCACTGTTGGTGGAAATGTAAACTAGTACAACCACTATGGAAAACACTGTGGAGATTCCTGAAAGAACTAAAAGTAGTACTACCATTTGATCCAGCAATCTCACTACTGGGTATCTACCCAGAGGAAAAGAAGTCCTTATATTAAAAAGATACTTGCACACACACACACACACTCTCACACACATGCAAGATACTTGCACAGCACAATTTGCAATTGCAAAAATATGGGGCCAGCCCAAATGCCCATCAATCAATGAGTGGATAAAGAAATTGCAGTATATATATATATATATATATATATATATATCATGGAATACTACTCACCCATCAAAAAGTGGGTTGT TR:VR 48:9 9:0 chrX 103183306 r_464_0 T [chrX:136920102[ATCCTGCCC . PASS SVTYPE=BND;MATEID=r_464_1;SVINSLEN=8;SVINSSEQ=ATCCTGCC TR:VR 87:8 23:0 chrX 136920102 r_464_1 C [chrX:103183306[GGCAGGATC . PASS SVTYPE=BND;MATEID=r_464_0;SVINSLEN=8;SVINSSEQ=GGCAGGAT TR:VR 87:8 23:0 chrX 153026572 i_1709 A . PASS END=153026572;SVTYPE=INS;SVINSLEN=183;SVINSSEQ=TGTGTATATATATGTGTATATGTGTGTATATGTATATGTATATATATGTGTGTATATATATGTGTATATATATATGTGTATATGTGTGTATATGTATATGTATATATATATGTGTGTGTATATATGTGTGTATATATATATGTGTATATGTGTGTATATGTATATGTATATATATGTGTGTGT TR:VR 31:3 11:0 chr1 190180829 r_47 T . PASS END=242060374;SVTYPE=DUP;SVLEN=51879545 TR:VR 82:9 28:0 chr14 104209355 i_414 T . PASS END=104209355;SVTYPE=INS;SVINSLEN=528;SVINSSEQ=CCGAGACCACCAGAGCCAGGACACCACCAGAGCCAGGACACCACCAGAGCTGCGAGACCACCAGAGCTGGGACACCACCAGAGCTGCCACACCACCAGAGCCGCGACACCAGCAGAGCCGCGACACCAGCAGAGCCGGGACACCACCAGAGCCGTGACACCAGCAGAGCCGGGACACCACCAGGGCCGGGACACCAGCAGAGCCGGGACACCACCAGAGCCGTGACACCAGCAGAGCCGGGACACCACCAGGGCCGGGACACCACCAGAGCTGCGAGACCACCAGGGCCGGGACACCACCAGAGCCGGGACACCACCAGAGCCGGGACACCACCAGAGCTGGGACACCACCAGAGCTGCGAGACCACCAGAGCCGTGACACCACCAGAGCCGTGACACCAGCAGAGCTGGGACACCACCAGAGCTGTGAGACCACCAGAGCCGGGACACCACCAGAGCCAGGACACCACCAGAGCTGCGAGACCACCAGAGCCGTGACACCAGCAGAGCCGGGACACCACCAGAGCCG TR:VR 48:5 8:0 chr14 77856474 r_165_0 G ]chr18:50978468]T . PASS SVTYPE=BND;MATEID=r_165_1 TR:VR 80:9 27:0 chr18 50978468 r_165_1 T T[chr14:77856474[ . PASS SVTYPE=BND;MATEID=r_165_0 TR:VR 80:9 27:0 chr17 52215668 r_220_0 C ]chr8:73460117]T . PASS SVTYPE=BND;MATEID=r_220_1 TR:VR 127:17 30:0 chr8 73460117 r_220_1 T T[chr17:52215668[ . PASS SVTYPE=BND;MATEID=r_220_0 TR:VR 127:17 30:0 chr3 56674753 d_1582 C . PASS END=56680665;SVTYPE=DEL;SVLEN=-5912 TR:VR 33:4 14:0 chr5 110426716 r_376_0 C CCTA]chr5:110437032] . PASS SVTYPE=BND;MATEID=r_376_1;SVINSLEN=3;SVINSSEQ=CTA TR:VR 36:14 21:0 chr5 110437032 r_376_1 G GTAG]chr5:110426716] . PASS SVTYPE=BND;MATEID=r_376_0;SVINSLEN=3;SVINSSEQ=TAG TR:VR 36:14 21:0 chr5 55790949 d_1873 T . PASS END=55791024;SVTYPE=DEL;SVLEN=-75 TR:VR 24:14 15:0 chr6 76227832 r_399 A . PASS END=76360477;SVTYPE=DEL;SVLEN=-132645;SVINSLEN=8;SVINSSEQ=AGACAAGG TR:VR 70:16 29:0 chr7 58027022 d_2005 T . PASS END=58027835;SVTYPE=DEL;SVLEN=-813;SVINSLEN=127;SVINSSEQ=GTGCATTCAACTTAAAAATTCAACCTTTCTTTTGATAGAGCAGTTTTGAAAAACTCTTTTTATAATCTGCAAGTGTTCACTTGGAATGCTTAGAGGCTATGGTGGAAAATCAAATATCTTTACATAA TR:VR 36:5 18:0 chrUn_KI270442v1 104497 i_1642 G . PASS END=104497;SVTYPE=INS;SVINSLEN=397;SVINSSEQ=TAGAATCTGCAAGTGCAACATTTGGAGAGCTTTGGGGACTATTGTGGAAAAAGAAATATCTACACACAAAAACTTGACAGAAGCATTTTCAGAAACTTCTTTGAGATGTTTGCATTCAATTCTCAGTGTTGAACATACATTTTCATAGAGCAGTTTTGAAACACTCTTTTCAGTAAATCTGCAACTACTTTTTTTCCTAGAGCTGTTTTGAAACACTCTTTTTGTAGAATCTGCAAGTGGACATTTGGAGAGCTTTGAGGTCTCTGGTGGAAAACGAAATATCTTTACATAAAAAGTAGACAGATGCATTCTCAGAAACTTCTTTGTGATATATGTATTTAAGTCAAACAGTTAAACCTTTCTTTTGATACAGCAATTTTGAAACACTCTTTTTCAT TR:VR 91:5 33:0 chrX 105006447 d_2250 A . Too_small_size END=105006487;SVTYPE=DEL;SVLEN=-40 TR:VR 65:7 12:0 chrX 153066119 d_2284 G . PASS END=153074527;SVTYPE=DEL;SVLEN=-8408 TR:VR 37:5 21:0 chr1 13300139 d_35 C . PASS END=13300484;SVTYPE=DEL;SVLEN=-345 TR:VR 49:16 12:0 chr1 190410648 d_351 A . PASS END=190410712;SVTYPE=DEL;SVLEN=-64 TR:VR 52:8 4:0 chr1 27473879 r_8_0 A [chr7:75009335[T . PASS SVTYPE=BND;MATEID=r_8_1 TR:VR 73:9 21:0 chr7 75009335 r_8_1 T [chr1:27473879[T . PASS SVTYPE=BND;MATEID=r_8_0 TR:VR 73:9 21:0 chr10 109633880 d_466 A . PASS END=109633954;SVTYPE=DEL;SVLEN=-74 TR:VR 21:3 19:0 chr10 24168444 r_68 G . PASS END=24186242;SVTYPE=DEL;SVLEN=-17798 TR:VR 63:13 28:0 chr12 124751423 d_593 A . Too_small_size END=124751466;SVTYPE=DEL;SVLEN=-43 TR:VR 35:30 21:0 chr14 78413402 d_659 C . PASS END=78413576;SVTYPE=DEL;SVLEN=-174;SVINSLEN=1;SVINSSEQ=T TR:VR 40:10 14:0 chr17 52837730 r_221 G . PASS END=52856967;SVTYPE=DEL;SVLEN=-19237 TR:VR 61:9 29:0 chr18 41087844 d_1113 A . PASS END=41089273;SVTYPE=DEL;SVLEN=-1429 TR:VR 41:4 20:0 chr2 206985 r_260_0 G [chr2:181021395[T . Too_low_VAF SVTYPE=BND;MATEID=r_260_1 TR:VR 121:6 51:1 chr2 181021395 r_260_1 T [chr2:206985[T . Too_low_VAF SVTYPE=BND;MATEID=r_260_0 TR:VR 121:6 51:1 chr3 171308777 r_342 C . PASS END=171310817;SVTYPE=DEL;SVLEN=-2040 TR:VR 93:50 13:0 chr5 110426730 r_377_0 A [chr5:110437815[GT . PASS SVTYPE=BND;MATEID=r_377_1;SVINSLEN=1;SVINSSEQ=G TR:VR 36:10 20:0 chr5 110437815 r_377_1 T [chr5:110426730[CT . PASS SVTYPE=BND;MATEID=r_377_0;SVINSLEN=1;SVINSSEQ=C TR:VR 36:10 20:0 chrX 105030970 r_465 G . PASS END=105035775;SVTYPE=DEL;SVLEN=-4805 TR:VR 73:14 10:0 chr1 191441364 r_48 T . PASS END=191450082;SVTYPE=DUP;SVLEN=8718 TR:VR 62:6 15:0 chr10 109978387 r_89_0 T ]chr11:68538633]A . PASS SVTYPE=BND;MATEID=r_89_1 TR:VR 50:9 26:0 chr11 68538633 r_89_1 A A[chr10:109978387[ . PASS SVTYPE=BND;MATEID=r_89_0 TR:VR 50:9 26:0 chr13 112284325 d_628 C . PASS END=112284699;SVTYPE=DEL;SVLEN=-374;SVINSLEN=34;SVINSSEQ=CTTCAGAGTGGAGTCAGGTAAGTGTGGACCATTC TR:VR 45:3 22:0 chr14 81192065 r_166 A . PASS END=81583842;SVTYPE=DEL;SVLEN=-391777 TR:VR 62:10 28:0 chr14_GL000225v1_random 45731 i_421 G . Too_low_VAF END=45731;SVTYPE=INS;SVINSLEN=1957;SVINSSEQ=CAGTGCCTAGACGCGACTTGCATCACCTCAGAGACCAGTGCATAGATATGTCACAAAAACCTTCTGTACGAAAAGCCCCATACAAGGCTTACATCACCTAGGTGATCAGTGCAGTGATGTTTCACAAAAATCCCTGTAGCCAGAGCCTAGACAAGAGTTACATCAGCTGTGTGATCAGTGCAGTGACATGTCACAATGTCCATGTAGCCATATCCTTTGGCAAAAGTGACATCACCTGGGTGATCAGTGCGGAGATATATCACAATGTCTCCAGTAGGCAGAGCCTAGACAAGAGACCCATCACCTGGGTGATCAGGGCAGAGATATGTCACAATGCCCCCTCTAAGCAGATCCCAGACAATAGTTGCATCAGCTCGGTGATCAGCTGCAGAGATATGTCTCAATGCCCCCTGTCGGCGAAGCCTATACATGAGTTACACCATCCCCGGTGCATCAGTGCAGTGATATGTTAAAATGCCCTGGTAGGCAGAGCCTAGACAAAAGTTACATAACCTGGGTGATCAGTGCAGAGATATGTTCTAAATTCCACTGTAGGCAAAGCCTAGACAAGTTTTACATCCCCTCAGCGATCAGTGTGCAGAGATATGTCCCAATGTCCCTCCAGGCAGAGCTTAGACAGGAGTCACATCTCCTGGGTGATCAGTGCAGAAATATGTCACAATGCCCTCGTAGGCAGAGCGTAGACAAGGGTTACATAACTCCGGGTGATCCGTGCAGAATGATGTCACAATAGACCTCTGTAGGCAGAGACTAGAAAAGAGTTACATCACCTCGGTGATCAGTGCAGAGATATGTCACAATGCCCCCTGTAGGCAGAGAATAGAGAAGAGTTGCATCACCTGGGTGATCAATGCAGGAATATGTCACAATGTCCCCTGTAGGCAGAGCATAGAGAAGAGTTGCATCACCTGGGTGATTAGTGCAGAGATATGTCACAATGTCCCCTGTAGGCAAAGCGTAGACAATAGTTCCAACATTTGGGTGATCAGTGGAGAGATCTCTCAGAATTCCCCTGTAGGCAGAGCTTATACAACATTTACATCACCTGGGTGATCAGTGCAGAGATATGTCACAATGCCCCCATAGGCAGATCCAAGACAAGAGTCCGTCACCTGGGTGATCAGTGCAGAAATATGTCACCAATGCCCCCTTAGGCAGAGCCTAGACAAAAGCCCCATCACCTGTATGATCAGTGCAGAGTTATGTCACAAACTCCCTTTAGGCCGACCCTAGACAAGAGTTACATCACTTGGATGATCAGTGCAGAGATATGTCACAATGCCACTGTAGGCAGAGCCTAGACAAGTGTTACATTACCCAGGTACTCAGTGCAGAGATACATCGTAATGTCCCTGTACGCAGAGACTTGACAAGAGGTGTATCACCTGGGTGATCACTGCAGGGATATGTCACAAAGCACGCTGTACGCAGATCCTAGAGGAAAGATATAAAACCTGGGTGATCAGTGCAGAGATATGTCACAATGCCCTCATAGGCAAATCCAAGACAAAGGTCCGTCACCTGGGTGATCAGTGCAGAAATATGTGACAATGCCCCCAGTAGGCAGAGCCTAGAGAAGAGTCCCATCACCTACTCCGATAATCAGTGCAGAGATATTTCACAATGCCCCTGCAGGCAGAGCGTAAGCAAGAGTTACATCACCAAGATGTTCAGTGCAGAGATATGTCACAAGGCCCCCTATAGGCAGAGCTTGGACAGGAGTTACATCACCTTGGTGATCAACGCAGTGATATGTTATTATACCCCATAGGCAGAGCCTAGTCAAGCGTTACATCACGTGGGTGATCAGTGCAGAGATATGTCACAAAGCCCCCATACACAGATGCTAGACAAGAGACCCATCACCTGAGTGATCAGTGCAGAAATATGTCACAATGCCCCCTTAGGCAGATCCAACACAAGAGTTACATCACCT TR:VR 735:3 376:1 chr15 23042143 i_491 C . PASS END=23042143;SVTYPE=INS;SVINSLEN=390;SVINSSEQ=TGGGGGTCATAATAGCCACACCTGGCCAGAGGTGCTGTGGGGCCATCATAACCCCAGCTGGCCGGAGGTGCCCGGGGTAGGGGGGAACTTCATAACCCCACCTGGCCAGAGGTGCTGAGGGTGACTTCATAAATGTCACCTGGCCAGAGGTGCTGGGGGGGCCATCATAACCCCCACCTGGCCATGGGAGGTGCTGGGGGGACATCATAACCCCACCTGGCCAGAGGGTGCTGGGGGGGTATCATAACCCACCTGGCCAGAGATGCTGGGGGGACACTCATTAACCCCACCTGGCCAGAGGTGCTGTGGGGCCATCATAACCCCAGCTGGCCGGAGGTGCCGGGGGGCGGGGGGAACTTCCTCATAACCCCACCTGGCTAGAGGTGCCGG TR:VR 31:6 15:0 chr16 46385239 d_966 C . Too_low_VAF END=46385850;SVTYPE=DEL;SVLEN=-611 TR:VR 912:3 858:0 chr17 52856279 r_222_0 T T]chr17:52857191] . PASS SVTYPE=BND;MATEID=r_222_1 TR:VR 44:11 17:0 chr17 52857191 r_222_1 G G]chr17:52856279] . PASS SVTYPE=BND;MATEID=r_222_0 TR:VR 44:11 17:0 chr2 91510994 d_1307 C . Too_low_VAF END=91511075;SVTYPE=DEL;SVLEN=-81;SVINSLEN=58;SVINSSEQ=TGGCTTGGCTGGCTGGGTGGCCTGGCTGGCTTGGAGCTGGCTGGCTTGGCTTGGCTGG TR:VR 215:6 88:1 chr5 113768603 r_378 C . PASS END=113797387;SVTYPE=DEL;SVLEN=-28784;SVINSLEN=18;SVINSSEQ=GAATTGTACTTGAATTGT TR:VR 50:12 26:0 chr6 7729062 d_1912 G . PASS END=7731996;SVTYPE=DEL;SVLEN=-2934 TR:VR 49:16 14:0 chr10 111399671 r_90_0 T ]chr4:147068510]A . PASS SVTYPE=BND;MATEID=r_90_1 TR:VR 76:8 33:0 chr4 147068510 r_90_1 A A[chr10:111399671[ . PASS SVTYPE=BND;MATEID=r_90_0 TR:VR 76:8 33:0 chr11 125838237 d_552 G . PASS END=125839824;SVTYPE=DEL;SVLEN=-1587 TR:VR 29:10 11:0 chr11 55056038 d_527 C . PASS END=55056127;SVTYPE=INS;SVINSLEN=89;SVINSSEQ=AGATAGCTTCCTTCTGGTTTTCATCCTGAGATATTTGCCTTTTCTCCATTGGTCTCAATGGGCTCCCAAATGTCCAGTCACAGAATGTA TR:VR 35:6 13:0 chr14 81964051 r_167 T . PASS END=81965512;SVTYPE=DEL;SVLEN=-1461 TR:VR 38:23 16:0 chr17 52856443 r_223_0 G [chr3:88321112[A . PASS SVTYPE=BND;MATEID=r_223_1 TR:VR 69:6 37:0 chr3 88321112 r_223_1 A [chr17:52856443[A . PASS SVTYPE=BND;MATEID=r_223_0 TR:VR 69:6 37:0 chr3 75669597 r_331_0 G GTT[chrY:11309246[ . Too_low_VAF SVTYPE=BND;MATEID=r_331_1;SVINSLEN=2;SVINSSEQ=TT TR:VR 645:3 452:0 chrY 11309246 r_331_1 G ]chr3:75669597]AAG . Too_low_VAF SVTYPE=BND;MATEID=r_331_0;SVINSLEN=2;SVINSSEQ=AA TR:VR 645:3 452:0 chr5 11519 i_1295 T . Too_low_VAF END=11519;SVTYPE=INS;SVINSLEN=55;SVINSSEQ=ACCCCTACCCCTACCCCCAACCCCAACCCCAACCCCAACCCCAACCCCAACCCCA TR:VR 82:4 35:1 chrUn_KI270442v1 112316 d_2204 A . Too_low_VAF END=112425;SVTYPE=INS;SVINSLEN=110;SVINSSEQ=ACACTCTTTTCGTAGAATCTGCAAGTGGATATTTGGACTGCTTTTAGGTTTTCTTTGGAAACAGGAATATCTTTACATAAAAACTAGACAGATGCATTCTCAGAAAGTTC TR:VR 126:4 54:1 chr10 111681230 d_467 C . PASS END=111681527;SVTYPE=DEL;SVLEN=-297 TR:VR 51:6 12:0 chr11 55056462 d_528 G . PASS END=55056592;SVTYPE=INS;SVINSLEN=135;SVINSSEQ=GTGGATTCTGCCAAAACAGTGTTTCCAGACTGCTGTAGCAAAATAATGTTTTATCTCTGTTTGTTAGGTGAATACACATATCACAAAGTGTTTTCTAAGATAGTTTTTTCTAGTTTTTTTTCCTGGGATATTTCT TR:VR 37:6 13:0 chr18 43116448 r_231 A . PASS END=43314896;SVTYPE=DUP;SVLEN=198448 TR:VR 93:10 42:0 chr19 1049420 i_665 C . PASS END=1049430;SVTYPE=INS;SVINSLEN=409;SVINSSEQ=CCCGGACCCTCCCTCCCTGTGAGGCCCCCCACCACTCCCTCCCTGTGAGCCCCCCCACCACTCCCTCCCCCCGTGAGGCCCCCCACCACTCCCCTCCCCGTGAACCCCCCACCACTCCCTCCCCGTGAGCCCCCCACCACTCTCCCTCCCCGTGAACCCCCCACCACTCCCTCCCTGTGACTCCCCCCCCACCACTCCCTCCCCGTGAAGCCCCCCACCACTCCCTCCCCGTGAGCCCCCCACCACTCCCCCTCCCCGTGAGCCCCCCCACCACTCCCTCCCCGTGAGGCCCCCCACCACTCCCTCCCCGTGAGCCCCCCCACCACTCCCCCTCCCCGTGAGCCCCCCCACCACTCCCTCCCTGTGAGGCCCCCCACCACTCCCTCCCTGTGAGCCCCCCCACCACTCC TR:VR 31:4 18:0 chr19 44014496 d_1186 A . PASS END=44014603;SVTYPE=DEL;SVLEN=-107 TR:VR 37:12 11:0 chr2 90385859 d_1270 C . Too_low_VAF END=90386319;SVTYPE=DEL;SVLEN=-460 TR:VR 496:3 220:1 chr10 113245943 r_91_0 T ]chr19:22323795]G . PASS SVTYPE=BND;MATEID=r_91_1 TR:VR 69:8 33:0 chr19 22323795 r_91_1 G G[chr10:113245943[ . PASS SVTYPE=BND;MATEID=r_91_0 TR:VR 69:8 33:0 chr2 209561477 d_1337 T . Too_small_size END=209561512;SVTYPE=DEL;SVLEN=-35 TR:VR 25:9 10:0 chr3 195710629 d_1692 T . Too_small_size END=195710608;SVTYPE=INS;SVINSLEN=24;SVINSSEQ=GGAGGGACCTGGCTCCTGGTGAGT TR:VR 128:16 18:0 chr3 80791963 r_332 A . PASS END=81691556;SVTYPE=DEL;SVLEN=-899593 TR:VR 34:5 29:0 chr4 49645370 d_1762 A . Too_low_VAF END=49645763;SVTYPE=DEL;SVLEN=-393;SVINSLEN=34;SVINSSEQ=ATGGAATGGAATGGAATGGAATGGAATAAAAGGG TR:VR 257:11 63:0 chr5 181142234 r_385_0 A ACCAAGAATATCCTCTGCATTCCTG[chrX:106053992[ . Too_low_VAF SVTYPE=BND;MATEID=r_385_1;SVINSLEN=24;SVINSSEQ=CCAAGAATATCCTCTGCATTCCTG TR:VR 97:3 37:0 chrX 106053992 r_385_1 T ]chr5:181142234]CAGGAATGCAGAGGATATTCTTGGT . Too_low_VAF SVTYPE=BND;MATEID=r_385_0;SVINSLEN=24;SVINSSEQ=CAGGAATGCAGAGGATATTCTTGG TR:VR 97:3 37:0 chr6 79030769 r_400 A . PASS END=79277419;SVTYPE=DEL;SVLEN=-246650;SVINSLEN=11;SVINSSEQ=TATATATATAC TR:VR 87:9 27:0 chr7 61101488 d_2008 T . PASS END=61102621;SVTYPE=DEL;SVLEN=-1133;SVINSLEN=111;SVINSSEQ=CAACTCACAGATTTGAACCTTTCTTTTTTTATAGCAGTTTTGAAACACTCTTTTTGTAGAATCTGCAAGTGGATATTTGTATAGCTTTGAGGCTTTTATTGGAAACGGGAG TR:VR 27:5 18:0 chr9 12643472 d_2117 A . PASS END=12648128;SVTYPE=DEL;SVLEN=-4656 TR:VR 47:9 14:0 chr19 46356928 r_257 C . PASS END=46391619;SVTYPE=DEL;SVLEN=-34691 TR:VR 42:7 24:0 chr2 211095840 d_1338 C . PASS END=211097248;SVTYPE=DEL;SVLEN=-1408 TR:VR 39:6 12:0 chr2 87415208 d_1243 A . Too_low_VAF;Too_small_size END=87415253;SVTYPE=DEL;SVLEN=-45;SVINSLEN=1;SVINSSEQ=G TR:VR 274:4 110:0 chr3 1120992 r_327_0 T ]chr7:113296836]TTTTTTTTTTTT . Too_low_VAF SVTYPE=BND;MATEID=r_327_1;SVINSLEN=11;SVINSSEQ=TTTTTTTTTTT TR:VR 83:3 33:0 chr7 113296836 r_327_1 T TAAAAAAAAAAA[chr3:1120992[ . Too_low_VAF SVTYPE=BND;MATEID=r_327_0;SVINSLEN=11;SVINSSEQ=AAAAAAAAAAA TR:VR 83:3 33:0 chr3 172275218 r_343 A . Too_low_VAF END=172750008;SVTYPE=DUP;SVLEN=474790 TR:VR 213:9 19:0 chr6 161351126 i_1432 T . PASS END=161351126;SVTYPE=INS;SVINSLEN=180;SVINSSEQ=TTATATATTTATATTTAAAATATATATAAATATATTTTATATATTTATATTTAAAATATATATAAATATATATTTTATATATTTATATATAAAATATATATAAATATATTTTATATATTTATATATAAAATATATATAAATATATTTTTATATATTTATATTTAAAATATATATAAATAT TR:VR 23:3 10:0 chr6 39053492 d_1925 C . PASS END=39057623;SVTYPE=DEL;SVLEN=-4131;SVINSLEN=7;SVINSSEQ=AGCAGTG TR:VR 49:10 24:0 chrUn_GL000216v2 164605 i_1618 C . Too_low_VAF END=164605;SVTYPE=INS;SVINSLEN=290;SVINSSEQ=GTGATCACTCACTGTTGGCTTCAGGTGGTGCAACTTGTAGATGACTGTGACATGTCTCTAAATCACACAGGTAATATAGCTCTCCTCTACGATCTGCCTACAGGGTGCTTTGTGACATATCCCTGCACTGATCACCCAGGTGATCTAACTCTGGTCTAAGCTCTTCCTAAAGTGGCATTGTGACAGATCTCTGCACTGATCACTCTGGTGATGTAAGTGTTGTCTAGGCTCTGCCTGTCCAAGGGGCCTTGTCACAAATCTCTGCACTGATCACCCAGGTGATGTAACTC TR:VR 157:4 61:0 chrX 108972602 d_2253 G . Too_small_size END=108972642;SVTYPE=DEL;SVLEN=-40 TR:VR 62:14 17:0 chr10 114082972 r_92_0 G G[chr17:53581516[ . PASS SVTYPE=BND;MATEID=r_92_1 TR:VR 75:5 28:0 chr17 53581516 r_92_1 T ]chr10:114082972]T . PASS SVTYPE=BND;MATEID=r_92_0 TR:VR 75:5 28:0 chr14_GL000225v1_random 46314 d_722 A . Too_low_VAF END=46661;SVTYPE=DEL;SVLEN=-347;SVINSLEN=6;SVINSSEQ=GTGCAG TR:VR 738:4 383:1 chr15 25908212 d_938 T . PASS END=25908330;SVTYPE=DEL;SVLEN=-118 TR:VR 29:8 8:0 chr3 175284276 i_1118 C . PASS END=175284280;SVTYPE=INS;SVINSLEN=1513;SVINSSEQ=ATCTCTGCACTCTCAGGGACCCAGGAAGGGTCCCCCCTGTCTCCAGTAGGCTTGGAAGTGCCTGATCCCACTGTCTGGCTTCTCTCTGCTGTCAACACCTACTCCAATCACACAGCAAAGCTGAGGCCGAGCCCAAGCACTGTCATAACCTGGCTGAGTATGTGCACACTCGGGACAGCGGTGACACACCAGCCCCCTGCCCACTTGGCCCCCTCTGGACTTTGGGCACCAACAAGCACAGGAGGGAGGCTGAAGAGGGGCTGAGGGCAGCTCGGTGCTGGCCTGCAGGTACCCTTCAGCATAAAGAGCCTGGGCACTACGAACAGTGGCAAGAGGCAGACAGGCTCCTGGGCAGAAAGGGGCAGGTCCCCAGTGAAGCCCCACCTTCAAGCTGGGGAAGGCCTGAAGCCTGGGAACCAAGCTGCCAGTCCCATGGACCAGAGTGGGTACTTACAGTGCTTTTTCTGGGCCTGCCCATGGCCACCCATGGACCCATCGGCATGCACTTTCTCCCCTCTAAGGCCCATAAAAAACCCTGGACTCAGCCACACCAGAAGAGATGACGGGACAACCAGCTGCAGAAGGGAGCTACCCTCTCTGCTGAGAGCTCAAGAGATGATGGGACAACCTGCCTGCAGAGAGGAGCTACCCTCTCTGCTGAAAGCTGAACACTCATCGGGACACCATGGCTATGTAGAGGAGCTACCGACTGTGGGTTTCCTCTGAGCTGTTTTATTGTTCAATAAAGCTCCTCTTCGTCTTGCTCACCCTCCACTCGTCTGTGTACCTCATTCTTCCTGGACACAGGACAAGAACTCAGTACCCACCAAATGGGGTTGCTAAAAGAGCTGTAACACAAACAGGGCTGAAACATGTCCCTTGCTCACCACGTTGTGGGTGACAAGAAAAAGAGAAGAGAGAAGGAGAGAGGAGCTGTAGCCACAGACCTAGGAGCTCCCTGAGCCAGGGCTGTGACACCCCCTTTAGGGCTCTGTGGTTCCTGGCATCTCCGAGCTTCCAGGCACCACCGCATTTTCTGGTGTGAGCTGTGGAAGCTGCTTATGGTATGCTTGGTCCAGCTCCAGCCTTGCAGGGAGCTGGCATCCATGCCAGTGCCTGGAACTGCCCGCCCCACCACAGCCAGTGTGTCTGGCTATGGACAGTGGCCAGACCCCACACTCACTCACGGACCCCTTGCCACTTCATGCCTGGCTTGCCCTTGGCAAGTGTGGGATCCAGGCCAGTAGTGTGAGCTGGGCACTGTCTGACAGGCTGAGTGGGTAGAACAAGCCCAGAAGGCCAGAGCAAAACTCAGGCAAAGGCACCACTGGTCATAGAGGTTTCTGGCTGGCAAAGCAACACCCCAGGGATTCTGTAAGGGTGCAGCCTGAGATGCAGTGGGCCGAAGTGGTAACCAGTGCACAGTGAACCTGCTTTGTAAGGGGCACGATATATGAGGCAAAAAAGCTAAAATACTGTTTTAATGTTCAACTGCCTTAAACAAATGTAGAAT TR:VR 89:59 15:0 chr9 126705753 d_2127 G . PASS END=126705820;SVTYPE=DEL;SVLEN=-67 TR:VR 22:9 10:0 chrX 109054467 d_2254 G . Too_small_size END=109054505;SVTYPE=DEL;SVLEN=-38 TR:VR 55:4 18:0 chr1 31564136 d_38 T . PASS END=31564224;SVTYPE=DEL;SVLEN=-88 TR:VR 49:8 21:0 chr10 114082994 r_93_0 T ]chr17:53581518]T . PASS SVTYPE=BND;MATEID=r_93_1 TR:VR 74:4 28:0 chr17 53581518 r_93_1 T T[chr10:114082994[ . PASS SVTYPE=BND;MATEID=r_93_0 TR:VR 74:4 28:0 chr10 32416503 r_70 A . PASS END=32429159;SVTYPE=DEL;SVLEN=-12656 TR:VR 46:10 27:0 chr13 112804490 i_375 C . PASS END=112804507;SVTYPE=INS;SVINSLEN=282;SVINSSEQ=ACCTCCCTCCCCCCATCCCCTCTCTGCCCCTCCTTCCCCTCCTTCCCTCCTTCACCTCCCTCCCCATCCCCTCTCTGCCCTCCTTCCCCTCCTTCCCTCCTTCACCTCCCTCCCCCCATCCCCTCTGCCCTCCTTCCCTTCCTTCCCCTCCTTCCCTCCTTCACCTCCCCTCCCCCATCCCCTCTCTGCCCTCCTTCCCCTCCTTCCCTCCTTCACCTCCCTCCCCATCCCCTCTCTGCCCTCCTTCCCCTCCTTCCCTCCTTCACCTCCCTCCCCCCATCC TR:VR 34:5 17:0 chr15 32995305 r_185 T . PASS END=33081847;SVTYPE=DUP;SVLEN=86542 TR:VR 59:3 39:0 chr18 4510840 i_621 G . Too_low_VAF END=4510840;SVTYPE=INS;SVINSLEN=155;SVINSSEQ=TGGTGGTGGTGTGGTGGTGTGTGTGTGTGTGGTGTGTGTGTGTGGTGGTGTGGTGCACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA TR:VR 61:3 26:0 chr19 47231144 d_1188 G . PASS END=47231314;SVTYPE=DEL;SVLEN=-170 TR:VR 22:6 6:0 chr22 47272805 r_325 T . PASS END=47520613;SVTYPE=DUP;SVLEN=247808 TR:VR 52:10 32:0 chr6 162878 d_1910 T . PASS END=163689;SVTYPE=DEL;SVLEN=-811 TR:VR 47:11 15:0 chr6 48741476 r_390_0 C C]chr6:48752040] . PASS SVTYPE=BND;MATEID=r_390_1 TR:VR 54:14 29:0 chr6 48752040 r_390_1 G G]chr6:48741476] . PASS SVTYPE=BND;MATEID=r_390_0 TR:VR 54:14 29:0 chr7 65839097 d_2010 C . PASS END=65839164;SVTYPE=INS;SVINSLEN=164;SVINSSEQ=CGGTGGCTTCTCCAGACTGAGAACTTTCTCAAGTCTGCCATTTCAACCCAAACTCCTGCCTCCCATTGGCCTCTACAGGCCCAACCTCTGCCTCACAGCAGACTTTCCAGGCCCAGTATCTGCCTCACCACAGCCTCCCAGGCAAAGCTCCTGCCTTTCGGCAG TR:VR 32:8 10:0 chr9 126804927 d_2128 A . PASS END=126805003;SVTYPE=DEL;SVLEN=-76 TR:VR 27:11 14:0 chrX 156029900 i_1712 G . Too_low_VAF END=156029900;SVTYPE=INS;SVINSLEN=462;SVINSSEQ=AGGGTTAGGGTGAGGGTTAGGGTTAGGGAGAAGGGTAAAAGGGTCTAGGGTCAGGGTTAGGGTTGGATCCAGGGCTAGGGTATCCCCAGGGAGCTCTCATTCCATCTAGGGCCTGATTTCTAGGGTGGGGGCTTTAGGTTGAGGGTTGGGGTTGGGGATGGTGGGTTAGGGTTGGGGTTATGTGGGTTAGGTCCAAGTCCTGGGAAAGAAAATGGCTCTGGGTTAGGGTTAGGGTTAGGGTCCTGCAAGGGTTGGGGATGGGGTTGAGGGTGAGGGTTGTCCATGCCCACCCAGAACCAGGGTTAGGGTTAGGGGGTGGGGTTGGGGTTAGGGGTGAGGGGGCCGGGTTAGGGTCAGGGGTGTAGGGAAGATGGGTTGCCAAGGAGGGTTGGGGTGCTGGAACCAGCAGAAGGAGGTTAGGCAGGCAGGACCTCTGCAGGCCAGGGTTAGGGTTAGGGTTCA TR:VR 185:6 167:0 chr11 55648486 r_109 C . PASS END=61060197;SVTYPE=DEL;SVLEN=-5411711 TR:VR 68:8 25:0 chr15 33641822 d_939 G . Too_small_size END=33641863;SVTYPE=DEL;SVLEN=-41 TR:VR 27:8 15:0 chr19 13694715 d_1162 T . PASS END=13695835;SVTYPE=DEL;SVLEN=-1120 TR:VR 68:8 14:0 chr22 47755469 r_326_0 T [chrX:103676546[AT . PASS SVTYPE=BND;MATEID=r_326_1;SVINSLEN=1;SVINSSEQ=A TR:VR 84:8 29:0 chrX 103676546 r_326_1 T [chr22:47755469[TT . PASS SVTYPE=BND;MATEID=r_326_0;SVINSLEN=1;SVINSSEQ=T TR:VR 84:8 29:0 chr3 118313939 d_1607 G . PASS END=118315191;SVTYPE=DEL;SVLEN=-1252 TR:VR 49:24 13:0 chr3 176394071 d_1648 T . PASS END=176394591;SVTYPE=DEL;SVLEN=-520 TR:VR 88:8 19:0 chr3 195713133 d_1695 C . PASS END=195713552;SVTYPE=DEL;SVLEN=-419;SVINSLEN=69;SVINSSEQ=CTGCCCTAAGTCTCCTCCCTGACCGGTCCTCCTGCCCTAAGTCTCCTCCCTGACCCGTCCTCCTGCCCT TR:VR 128:33 15:0 chr5 120837625 r_379 G . PASS END=120858191;SVTYPE=DEL;SVLEN=-20566;SVINSLEN=2;SVINSSEQ=AT TR:VR 28:4 29:0 chr5 19072108 d_1850 T . Too_small_size END=19072144;SVTYPE=DEL;SVLEN=-36 TR:VR 30:10 13:0 chr5 74509802 r_372_0 G G[chr8:49134875[ . PASS SVTYPE=BND;MATEID=r_372_1 TR:VR 46:7 39:0 chr8 49134875 r_372_1 G ]chr5:74509802]G . PASS SVTYPE=BND;MATEID=r_372_0 TR:VR 46:7 39:0 chr6 165619124 i_1434 A . PASS END=165619124;SVTYPE=INS;SVINSLEN=905;SVINSSEQ=GCGCAGCGCAGTCCAGCGTAGTGCGCAGTCCAGCGCAGCGTAGTCCAGCGCAGGTCCAGCATAGTCCAGCGCAGTGCAGTGTAGCCCAGTGTGGTGTAGCGCAGTGCAGCGCAGTCCAGCGCAGTCTAAGCGCAGCGCAGTCCAGCGCAGCGCAGTCCGTGCCACAGTCCAGCGCAGCGCAGTCCAGCGTCGCGCAGCGCAGCGCAGCGCAGTCCAGCGCAGCGCAGTCCAGCGCAGCGCAACGCAGCAGCGCAAGATCCCAGCGCAGCGCAGACCAGCGTGGCGCAGCGCAGTCCAGCGCAGCGCAGTCCAGCGTGAGCGCAGTCCGCTGCAGCCAGTCCAGCGCAGCAGCGCAGTCCAGCGTGGTGCAGCGCAGCAGCGCAGTCCAGCGCAGCGCAGTCCAGCGCAGCGCGGCGCAGTGCAGTCCAGCACAGCGCAGCGCAGTGCGGCAGTCCAGTGCGCAGCGCAGCAACAGCGCAGGCCAGCGCAGCGCAGCAGTGCAGTCCAGCACAGTGCAGCAGCAGTCCAGCGCACCGCAGTGCAGTACAGCGCAGTCCAGCGTGCGCGGTGCAGCGCAGCGTAGTCCAGCGCACTGCAGCGCAGCGCAGTGCAGCGCAGCAACAGTCCAGCGCAGTCCAGCACAGCGCAGTCCAGCGCAGCGCAGCGCAGTCCAGCGCAGTCCAGCGCACCGCAGCGCAGTGCAGCGTAGCCCCAGCGCACCGCAGCGCAGCGCAGTGCAGTCCAGCGCAGTCCAGCGCACCGCAGCGCAGCGCAGTCCAGCGCACCGTAGCGCAGCGCAGCGCGGTCCAGCGCAGCGGCAGTCCAGCGCAGCACAAACCAGCAGTCCAGCGCAGCGTGCAGCGCAGTCCAGTCCAGGCGCAGTCCAGTGCAGTGTAGTCTAGTGT TR:VR 32:4 10:0 chr6 48746876 r_391 A . PASS END=141811070;SVTYPE=DUP;SVLEN=93064194 TR:VR 62:12 38:0 chr6 94757579 i_1410 T . PASS END=94757583;SVTYPE=INS;SVINSLEN=117;SVINSSEQ=ATTGTGCTACTTTATATTATTATTACATTGTAATATATAATAAAATAATTATACAACTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA TR:VR 48:6 13:0 chrX 110916175 r_466 A . PASS END=140072101;SVTYPE=DEL;SVLEN=-29155926 TR:VR 84:5 44:0 chr10 114875147 d_469 C . PASS END=114875478;SVTYPE=DEL;SVLEN=-331 TR:VR 55:12 18:0 chr10 35103756 d_402 G . PASS END=35103827;SVTYPE=DEL;SVLEN=-71 TR:VR 43:4 13:0 chr11 13612725 r_101 G . PASS END=14186459;SVTYPE=DUP;SVLEN=573734 TR:VR 56:5 35:0 chr11 60642081 r_110_0 A A]chr6:129802343] . Too_low_VAF SVTYPE=BND;MATEID=r_110_1 TR:VR 86:3 32:0 chr6 129802343 r_110_1 T T]chr11:60642081] . Too_low_VAF SVTYPE=BND;MATEID=r_110_0 TR:VR 86:3 32:0 chr17_KI270729v1_random 156673 d_1081 T . PASS END=157580;SVTYPE=DEL;SVLEN=-907;SVINSLEN=1;SVINSSEQ=G TR:VR 34:4 17:0 chr20 64132292 i_958 C . PASS END=64132292;SVTYPE=INS;SVINSLEN=673;SVINSSEQ=CCTCACTGTCCACCCTCATGCCCTATAGAGACCCCCTCACTGTCCACCTCATGTGTCCTATAGAGACCGCCCTCACTGTCCACCCTCATGTCCTATAGAGACCCCCTCACTGTCCACCCTCATGGCCTATAGAGACCCCTCACTGTCCACCCTCATGTCCTATGAGACCCCCTCACTGTCCACCCTCATGTCCTGTAGAGACCCCCTCACTGTCCACCCTCATGGCCTGTAGAGACCCCCTCACTGTCCACCCTCATGGCCTGTAGAGACCCCCTCACTGTCCACTCTCATGGCCTGTAGAGACCCCCTCACTGTCCACTCTCATGGCCTGTAGAGACCCCCTCACTGTCAACTCTCATGTCCTATGAGACCCCCTCACTGTCCACCCTCATGTCCTATAGAGACCCCCTCACTGTCCACCCTCATGGCCTGTAGAGACCCCCTCACTGTCCACTCTCATGGCCTGTAGAGACCCCTCACTGTCAACTCTCATGTCCTATGAGACCCCCTCACTGTCCACCCTCATGTCCTATAGAGACCCCCTCACTGTCCACCCTCATGTCCTATAGAGACCCCCTCACTGTCCACCCTCATGTCCTATAGAGACCCCTCACTGTCCACCCTCATGGCCTGTAGAGACCCCCTCACTGTCCACCCTCATGTCCTATGAGAC TR:VR 51:6 6:0 chr5 19935867 d_1851 C . PASS END=19935922;SVTYPE=DEL;SVLEN=-55 TR:VR 30:11 13:0 chr5 74573360 r_373_0 T ]chr8:50732449]T . PASS SVTYPE=BND;MATEID=r_373_1 TR:VR 42:6 28:0 chr8 50732449 r_373_1 T T[chr5:74573360[ . PASS SVTYPE=BND;MATEID=r_373_0 TR:VR 42:6 28:0 chr6 49799172 r_392_0 G [chr6:49799748[A . PASS SVTYPE=BND;MATEID=r_392_1 TR:VR 44:15 14:0 chr6 49799748 r_392_1 A [chr6:49799172[A . PASS SVTYPE=BND;MATEID=r_392_0 TR:VR 44:15 14:0 chr7 67658795 r_414 A . PASS END=67666498;SVTYPE=DEL;SVLEN=-7703 TR:VR 35:16 24:0 chr10 11563397 r_65 G . PASS END=11615587;SVTYPE=DEL;SVLEN=-52190 TR:VR 42:21 28:0 chr10 35549647 d_403 T . PASS END=35549708;SVTYPE=INS;SVINSLEN=61;SVINSSEQ=GCTCATGGCCCATGACCCTACACTGTTCGTGACCCTGCGCTGCTCATGGTCCGTGACCCTA TR:VR 42:7 13:0 chr11 60913608 d_532 C . PASS END=60913776;SVTYPE=DEL;SVLEN=-168 TR:VR 35:6 16:0 chr14 86205692 i_407 T . PASS END=86205692;SVTYPE=INS;SVINSLEN=234;SVINSSEQ=GAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAA TR:VR 33:7 13:0 chr15 49050761 r_186_0 A ]chr5:52531093]T . Too_low_VAF SVTYPE=BND;MATEID=r_186_1 TR:VR 65:3 33:0 chr5 52531093 r_186_1 T T[chr15:49050761[ . Too_low_VAF SVTYPE=BND;MATEID=r_186_0 TR:VR 65:3 33:0 chr18 49035671 d_1116 A . PASS END=49035828;SVTYPE=DEL;SVLEN=-157 TR:VR 44:8 20:0 chr3 124752389 d_1608 C . PASS END=124752450;SVTYPE=DEL;SVLEN=-61 TR:VR 59:7 17:0 chr3 176518546 d_1650 A . PASS END=176518597;SVTYPE=DEL;SVLEN=-51 TR:VR 98:8 20:0 chr3 88722732 d_1585 A . PASS END=88723740;SVTYPE=DEL;SVLEN=-1008 TR:VR 48:30 14:0 chr5 79134878 d_1875 C . Too_small_size END=79134922;SVTYPE=DEL;SVLEN=-44 TR:VR 17:12 12:0 chr1 36803980 d_39 G . PASS END=36804039;SVTYPE=DEL;SVLEN=-59 TR:VR 31:21 26:0 chr11 61065163 d_533 A . PASS END=61065312;SVTYPE=DEL;SVLEN=-149;SVINSLEN=5;SVINSSEQ=TTCCT TR:VR 31:8 16:0 chr17 75583964 d_1050 C . PASS END=75584137;SVTYPE=DEL;SVLEN=-173 TR:VR 34:18 15:0 chr18 50976827 r_232 C . PASS END=62578354;SVTYPE=DUP;SVLEN=11601527 TR:VR 73:10 27:0 chr19 51690858 d_1190 C . PASS END=51690915;SVTYPE=DEL;SVLEN=-57 TR:VR 19:5 16:0 chr22 48695630 d_1547 A . PASS END=48695788;SVTYPE=DEL;SVLEN=-158 TR:VR 35:7 13:0 chr3 89693767 i_1085 A . Too_low_VAF END=89693767;SVTYPE=INS;SVINSLEN=164;SVINSSEQ=TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGATTTTATCTCATTTTATTGTTATTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCA TR:VR 62:3 12:0 chr5 124954602 d_1882 T . Too_small_size END=124954638;SVTYPE=DEL;SVLEN=-36 TR:VR 18:6 13:0 chr6 50520341 r_394_0 C [chrX:81459887[C . PASS SVTYPE=BND;MATEID=r_394_1 TR:VR 88:5 18:0 chrX 81459887 r_394_1 C [chr6:50520341[C . PASS SVTYPE=BND;MATEID=r_394_0 TR:VR 88:5 18:0 chr7 68594194 d_2013 C . PASS END=68594422;SVTYPE=DEL;SVLEN=-228 TR:VR 31:9 16:0 chrUn_GL000216v2 16991 i_1610 C . Too_low_VAF END=16991;SVTYPE=INS;SVINSLEN=1637;SVINSSEQ=ACTGCATTCCATTCGAATCCTGCTGATTCCAGTCCATTCCGTTCCATTCTTTTCCATTCCATTCCATTCCACTCTTGTTGATTCCATTTGATTCCATTCCATTCCATTCCATTCCTCTTGGGTTGATTCCATTCCATTGCATTTTATTCCATTTCATTCCCTTCCATTCCATTCCATTCCATTCCACACGGGTTGATTCCATTCCATGCCATTTTATTCCATTCCATTCCATTCCATTCTATTCCATTCCACTAGTGTTGATTCCATTCCATTCGACTCCATTCCATTCCACTCGGGTGGATTCCATTCCATTCCATTCCTTTCCATTCCATTGCATTCCATCCCATTCCATTCCATTCCCTTAGGTTTTTTCAATTCCATTCGATTCCATCCCATTCTGTTCCATTCCTTTACATGTCATTCCATTCCATTCCTTTCCAGTTGATTCCATTCCAATCCATTCCATTCCATTCCACTCGGGTTGATTCCAGGCAATTCCATTCCATTCCACTTGATTCCACTCCATTCCATTCCATTACACTCGTGTTTATTCCATTCCATTCCTTTCCATTCCATTCCTTTCCATTATGTTCCATTTCATTCCGTTCGACTCTGGTTGATTCCATTCCAATCCATTTCAAACCATTCCATTCCATTCCATTCAATTGGAAACGAGGTTGATTCCATTCCATTTCACCCCATTCCATTCCATTCCATTCCATTCGAATCGGCCTGATCCCATTCTATTCTATTCCATTCCATTCCATTCCATTCCACTTGGTTGATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCACTTGGTTGATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCATTTCCAATCAATTCCATTCCATTCCAATCAGTTTGATTCCATTCCATTCTATTTTATTCCATTCCATAGCATTCCATTCCATTCCATACCATTCCACTCTGCTTGATTCCATTCCATTCCATTTTATTCCATTCCATTCCATTCCGTTCCCCACTGGTTGATTCCATTCCCTTTCATTACATTCCATTTCTTTCCATTCCATTGCATTCCATTCCATTTCACTCGGGTTGATTCCATTCCATTCCATTCGTTCCATTCTATTCCGTTCAACTCCATTCTCTTCAATTCCATTCCATTCTATTGCATTCCATTCCATTGAATTCCATTCCATTCCATTACAGTTTATTCAATTCCATTCTATTCCATTCCATTCCATTCCATTTCGTTCCATTCCAGTTGATTGAATTCCATTCTATTCCATTCCATTCCATTCATTTCCATTCCTTTCCATTCCACTCCAGTTGAATCCATTCCATTCCATTCCATTCCAGTTTATTAAATTCCATTCCATTCCATTCCATTCCATTTCACTTGGGTTGATTCAATTCCATTCTATTCCATTCTATTACATTCCATTGCATTCCCCTCCATTCCAATAGAGTTGAATCAGTGCGTTCTATTCCATTCCATTCCTTTCTATTCAATTCCATTGCATTCCATACGTATTGTTTGCATTCCATTCCATTCCATTCCTTTCCACTCAGGTTGATTCTATTCCATTCTATTCCATTCCATTCTATTCCATTCCATTCCATTCTA TR:VR 647:6 172:1 chr10 122082511 r_95_0 A AAA[chr22:17119908[ . PASS SVTYPE=BND;MATEID=r_95_1;SVINSLEN=2;SVINSSEQ=AA TR:VR 73:8 23:0 chr22 17119908 r_95_1 A ]chr10:122082511]TTA . PASS SVTYPE=BND;MATEID=r_95_0;SVINSLEN=2;SVINSSEQ=TT TR:VR 73:8 23:0 chr13 113498103 r_151 T . PASS END=113516490;SVTYPE=DEL;SVLEN=-18387 TR:VR 34:22 21:0 chr14 106077104 r_175_0 A A[chr7:97140482[ . PASS SVTYPE=BND;MATEID=r_175_1 TR:VR 59:3 28:0 chr7 97140482 r_175_1 A ]chr14:106077104]A . PASS SVTYPE=BND;MATEID=r_175_0 TR:VR 59:3 28:0 chr17 1368953 r_212 T . PASS END=1374104;SVTYPE=DEL;SVLEN=-5151 TR:VR 30:20 13:0 chr17 76040780 d_1051 G . Too_small_size END=76040821;SVTYPE=DEL;SVLEN=-41 TR:VR 33:8 10:0 chr18 51111386 d_1117 G . PASS END=51111522;SVTYPE=DEL;SVLEN=-136;SVINSLEN=134;SVINSSEQ=TGTGTTTACAATCCCTGAGCTAGACACAAAAGTTCTCCCTCCCCACCAGATTAACTAGATACAGAGTGCCGATTGGTGCCTCCACAAACCCTGAGCTAGACACAGGGTGCTGATTGGTGTGTTTACAAGCCCTC TR:VR 52:8 5:0 chr3 177325920 d_1651 T . PASS END=177328439;SVTYPE=DEL;SVLEN=-2519 TR:VR 96:8 15:0 chr5 125954068 d_1883 A . PASS END=125954270;SVTYPE=DEL;SVLEN=-202 TR:VR 20:8 23:0 chr6 51919390 d_1926 T . PASS END=51919589;SVTYPE=DEL;SVLEN=-199;SVINSLEN=10;SVINSSEQ=ATTTATTAAA TR:VR 45:11 11:0 chr7 69613252 r_415 G . PASS END=69682031;SVTYPE=DEL;SVLEN=-68779 TR:VR 58:8 43:0 chr1 204261892 r_51_0 G [chr1:204305531[C . PASS SVTYPE=BND;MATEID=r_51_1 TR:VR 152:29 35:0 chr1 204305531 r_51_1 C [chr1:204261892[C . PASS SVTYPE=BND;MATEID=r_51_0 TR:VR 152:29 35:0 chr10 122919807 r_96 C . PASS END=122933729;SVTYPE=DEL;SVLEN=-13922 TR:VR 51:6 33:0 chr11 16752533 d_499 A . Too_small_size END=16752569;SVTYPE=DEL;SVLEN=-36 TR:VR 16:13 10:0 chr11 61077632 r_111_0 T [chr18:73975020[A . PASS SVTYPE=BND;MATEID=r_111_1 TR:VR 47:7 33:0 chr18 73975020 r_111_1 A [chr11:61077632[A . PASS SVTYPE=BND;MATEID=r_111_0 TR:VR 47:7 33:0 chr15 65802714 r_187 G . PASS END=65810314;SVTYPE=DEL;SVLEN=-7600 TR:VR 30:18 19:0 chr18 52623580 r_233 T . PASS END=53321208;SVTYPE=DEL;SVLEN=-697628 TR:VR 85:8 31:0 chr3 177514762 r_345 T . Too_low_VAF END=177679137;SVTYPE=DUP;SVLEN=164375 TR:VR 198:8 16:0 chr5 127168639 d_1884 C . Too_small_size END=127168674;SVTYPE=DEL;SVLEN=-35 TR:VR 32:7 19:0 chr7 74214455 d_2014 T . Too_small_size END=74214440;SVTYPE=INS;SVINSLEN=13;SVINSSEQ=ATATATATATATA TR:VR 39:4 22:0 chr1 204306135 r_52_0 T [chr1:210745252[C . PASS SVTYPE=BND;MATEID=r_52_1 TR:VR 145:26 38:0 chr1 210745252 r_52_1 C [chr1:204306135[C . PASS SVTYPE=BND;MATEID=r_52_0 TR:VR 145:26 38:0 chr10 43621249 d_451 A . PASS END=43621317;SVTYPE=DEL;SVLEN=-68 TR:VR 52:12 17:0 chr11 62940993 d_535 G . Too_small_size END=62941031;SVTYPE=DEL;SVLEN=-38 TR:VR 38:10 13:0 chr20 33495458 d_1419 T . PASS END=33497103;SVTYPE=DEL;SVLEN=-1645 TR:VR 30:8 17:0 chr22 50217987 d_1548 G . Too_small_size END=50218023;SVTYPE=DEL;SVLEN=-36 TR:VR 31:10 17:0 chr3 178139497 d_1652 T . PASS END=178139551;SVTYPE=DEL;SVLEN=-54 TR:VR 79:8 14:0 chr6 55932662 i_1384 T . PASS END=55932662;SVTYPE=INS;SVINSLEN=905;SVINSSEQ=AAAATATGCAGTGTACCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATATTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGAAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAATAAAAAAAAAAATATGCTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA TR:VR 42:10 10:0 chrUn_GL000216v2 173637 i_1622 T . Too_low_VAF END=173637;SVTYPE=INS;SVINSLEN=540;SVINSSEQ=ATTTCACAATGCTCCCTTTGGGCAGAGGGTAGGACAAGAGTTACATCACCTAGGTGATCAGTGCAGTGAGATCTACTGTACCCTGTAGGCAATGCTTATAAAAGTGTTACATCACCTAATTGATCAGTGTAGAGATATGTCACAAAGCTCCCCGTAGGAAGAACTTAGATGAGTTACATCACCTGAGTGACTGAAAAGGTATGTCATGAAGCCCCTAGTAGGTGCCAGCCTAGAAAGTAGTTATATCACTTGGGTGATCAGTGGCGAGATTCCTCACAATTCCCTTTAGGCAGAATTATACGACAGTTACATCAACTGGGTGATCAGTGCAGAGATATATCACAATGCCCCCATAGGCAGATTCAAGACAAGAGTCCGTAACCAGGTGATCAGTGCAGAAATATGTCACAATGCTCCCATAGGCAGATCCAAGACAAGAGTCCGTGTCACCTGGGTGATCAGTGCAGAAATATGTCACAATGCCCCCTTAGTCAGAGCCTAGACAAAAGCCCCATCACCTGGATGATCAGTGCAGAGTTA TR:VR 158:3 61:1 chrY 56839812 d_2352 C . Too_low_VAF END=56842036;SVTYPE=DEL;SVLEN=-2224;SVINSLEN=281;SVINSSEQ=AGGGAGGGGGCATTGTGACATACTTCTGAACCGATCATCCAGGAGATGTAAGTATACTCCAGGCTTTGACTTAAGAGCATCGCAAGGTGTTGGGAGAGCCTCAGCCGGAATTTCACAGACAGACAAGGACAAAGAGAGGCCAGCGGGCTCCCTTGCACATCAGCCGGGGTGCGCAATGAGCGCAGGTTTAGCCAGGAGGCTGGCAAAGAGAGCTAGAAGTCTGCGTTCTGCCGCCAGGCGCTCCCAAGGTGGTAGCTGGGAGGCTGCAGGGGCACATCCCT TR:VR 309:3 152:1 chr1 204306139 r_53_0 T T]chr1:210745150] . PASS SVTYPE=BND;MATEID=r_53_1 TR:VR 145:27 38:0 chr1 210745150 r_53_1 G G]chr1:204306139] . PASS SVTYPE=BND;MATEID=r_53_0 TR:VR 145:27 38:0 chr11 63225666 r_112_0 A A]chr11:63226459] . PASS SVTYPE=BND;MATEID=r_112_1 TR:VR 39:5 23:0 chr11 63226459 r_112_1 A A]chr11:63225666] . PASS SVTYPE=BND;MATEID=r_112_0 TR:VR 39:5 23:0 chr14 89361190 d_669 C . Too_low_VAF END=89361390;SVTYPE=DEL;SVLEN=-200;SVINSLEN=41;SVINSSEQ=TCCACCACTACCACCTCCAGCTCCACCACCACCACCACTAC TR:VR 159:4 43:1 chr3 17820987 d_1578 G . PASS END=17822203;SVTYPE=DEL;SVLEN=-1216 TR:VR 31:14 10:0 chr8 43242072 d_2082 A . Too_low_VAF END=43242270;SVTYPE=DEL;SVLEN=-198;SVINSLEN=30;SVINSSEQ=ATACACAAAATATATATTATATACTGTACA TR:VR 255:3 175:0 chr9 133939029 d_2134 G . Too_small_size END=133939071;SVTYPE=DEL;SVLEN=-42 TR:VR 24:19 12:0 chr11 65011389 d_536 T . PASS END=65011462;SVTYPE=DEL;SVLEN=-73 TR:VR 24:9 15:0 chr15 71652396 i_497 T . PASS END=71652396;SVTYPE=INS;SVINSLEN=186;SVINSSEQ=TATTGTAAGTATTCATAAAGTATTATAGTGGCATTAAAGTAAGAAAGGGTAGATTTGACCTACTTCTACTTTGTATTTCCAGCTTCCGCCATGGGTTTACTACTATTTGTGAGGTGAATGCAAGTGAACAAAGTTCCTACTTTTAACATGTGGTTAAATCTGAAAGGTGACCAACAGTGACTCTCT TR:VR 25:9 18:0 chr18 54832874 d_1118 T . Too_small_size END=54832910;SVTYPE=DEL;SVLEN=-36 TR:VR 50:10 13:0 chr19 17132748 r_245_0 G G[chr3:86749796[ . PASS SVTYPE=BND;MATEID=r_245_1 TR:VR 105:28 27:0 chr3 86749796 r_245_1 A ]chr19:17132748]A . PASS SVTYPE=BND;MATEID=r_245_0 TR:VR 105:28 27:0 chr2 239817764 i_863 G . PASS END=239817764;SVTYPE=INS;SVINSLEN=1432;SVINSSEQ=CTGACCTGAGCCCCATCTGATCACTGTCCGGCATGCTGACCTGAGCCCCATCTGATCACTGTCCGCGGCATGCTGACCTGGGCCCCATCTGATCACTGTCCTGGGCATGCTGACCTGAGCCCCATCTGATCACCATCACAGTGCGTTGACCTGAGCCCCATCTGATCAGCTGTCCGGCAGCATGCTGACCTGGGCCCCATCTGATCACTGTCCGGCATGTTGACCTGAGCCCCATCTGATCACTGTCTGGCATGCTGACCTGGGCCCCATCTGATCACTGTCCGGCATGTGCACTGACCTGAGCCCCATCTCATCACTGTCTGGCATGCTGATCTGGGCCCCATCCTGATGACTGTCTGGCATGCTGACCTGGGCCCCATCTGATCACTGTCCGGCATGCTGACCTGAGCCTCATCTGATCACTGTCCGGCATGCTGACCTGAGCCCCATCTGATCACTGTCCGGCATGCTGACCTGGGCCCCATCTGATCACTGTCCGGCATGCTGACCTGAGCCCCATCTGATCACTGTCTGGCATGCTGATCTGGGCCCCCATCTGATCACTGTCCGGCATGCTGACCTGAGCCCCATCTGATCACTGTCTGGCATGCTGATCTGGGCCCCATCTGATCACTGTCCGGCATGCTGACCTGAGCCCCATCTGATCACTGTCTGGCATGCTGATCTGGGCCCCATCTGATGACTGTCTGGCATGCTGACCTGGAGCCCCATCTGATCACTGTCTGGCATGCTGGACCTGGGCCCCATCTGATGACTGTCTGGCATGCTGACCTGAGCCCCATCTGATCATTGGCCAGCACGCTAACCTGGGCCCCATCTGATCTCATTGACTGGGGCACGCTGACCTGGGCCCCATCTGATCACTGTCTGGCATGCTGACCTGGGCCCCATCACATCACTGTCCGGCATGCTGACCTGAGCCCCATCTGATCACTGTCTGGCATGCTGATCTGGGCCCCATCTGATCACTGTCCGGCATGCTGACCTGAGCCCCATCTGATCACTGTCTGGCATGCTGATCTGGGCCCCATCTGATCACTGTCCGGCATGCTGACCTGGGCCCCATCTGATCACTGTCTGGCATGCTGACCTGAGCCCCATCTGATCACTGTCCGGCATGATGACCTGGGCCCCATCTGATCACTGTCTGGCATGCTGATCTGGGCCCCATCTGATGACTGTCTGGCATGCTGACCTGAGCCCCATCTGATCACTGTCTGGCATGCTGATCTGAGCCCCATCTGATCACTGTCCGGCATGCTGACCTGAGCCCCATCTGATCACTGTCCGGCATGCTGACCTGGGCCCCATCTGATCACTGTCCGGCACTCCCTGAGCCTGGGCCCCATCTGAAAGTCACTGTCCGGCATGCTGACCTGAGCCCCATCTGATCACTGTCCGGCATGCCCCC TR:VR 24:4 16:0 chr20 28771912 d_1385 G . Too_low_VAF END=28772009;SVTYPE=INS;SVINSLEN=269;SVINSSEQ=AATGCTTCTGTGTAGTTTTTATGTGGAGATATTTCCTTTTCCACAATAGGCCTCTAAGCACTACAAATATCCACTTGCAGATTCTACAAATAGTGGGTTTTAAAACTGCTCAATCAATAGAAATGTTCGCCACCGTGTGTCTTGAAAGAAACATGTCACAAAGAAGTTTCTCAGAATGCTTCTGTGTAGCTTTAAATGAAGATATTTCCTTTCCACCATAGGCCTCAATGCACTCCAAATATCTACTTGCAGATTCTACAAAAAGTGTG TR:VR 108:3 33:0 chr4 51821243 i_1271 T . PASS END=51821243;SVTYPE=INS;SVINSLEN=81;SVINSSEQ=AAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA TR:VR 24:4 10:0 chr5 84097 d_1818 T . PASS END=84249;SVTYPE=DEL;SVLEN=-152;SVINSLEN=62;SVINSSEQ=GGGAGGCCGGGTGGTCAGGGAAGGCTCGATGGGAGGCCGGGGGTGGTCAGGGAAGCCTCGAT TR:VR 28:3 18:0 chr7 102601749 d_2023 A . PASS END=102601796;SVTYPE=DEL;SVLEN=-47 TR:VR 82:6 20:0 chrY 56840221 d_2354 T . Too_low_VAF END=56842008;SVTYPE=DEL;SVLEN=-1787;SVINSLEN=13;SVINSSEQ=GCCTAAATGGACT TR:VR 282:5 141:1 chr1 205270977 d_359 T . PASS END=205271079;SVTYPE=DEL;SVLEN=-102 TR:VR 48:9 18:0 chr11 65499303 d_537 G . PASS END=65499454;SVTYPE=DEL;SVLEN=-151 TR:VR 20:4 11:0 chr19 1767644 d_1155 A . Too_small_size END=1767685;SVTYPE=DEL;SVLEN=-41;SVINSLEN=1;SVINSSEQ=T TR:VR 29:11 17:0 chr5 27662763 d_1853 A . PASS END=27662835;SVTYPE=DEL;SVLEN=-72 TR:VR 33:10 16:0 chr7 7924335 d_1990 C . PASS END=7924383;SVTYPE=DEL;SVLEN=-48 TR:VR 21:12 12:0 chrUn_KI270442v1 24896 d_2198 T . Too_low_VAF END=24957;SVTYPE=DEL;SVLEN=-61;SVINSLEN=1;SVINSSEQ=G TR:VR 67:3 20:0 chr11 24255649 i_232 T . PASS END=24255649;SVTYPE=INS;SVINSLEN=248;SVINSSEQ=AAAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAA TR:VR 20:3 16:0 chr11 68305776 d_538 C . PASS END=68305884;SVTYPE=DEL;SVLEN=-108 TR:VR 25:5 15:0 chr13 113974469 i_380 G . PASS END=113974469;SVTYPE=INS;SVINSLEN=240;SVINSSEQ=GGTTCTGCGTCTTCCCTTCTTCTTTCCCGCAGGCCGGGGCTGGGGCGGGTTCTGCGTCTTCCCTTCTTCTTTCCCGCAGGCCGGGGCTGGGGCGCGGGTTCTGCGTCTTCCCCTTCTTCTTTCCCGCAGGCCGGGGCTGGGGCGGGTTCTGCGTCTTCCCTTCTTCTTTCCCGCAGGCCGGGGCTGGGGGCGGGTTCTGCGTCTTCCTTCTTCTTTCCCGCAGGCCGGGGCTGGGCGGAG TR:VR 28:5 12:0 chr18 57732289 d_1120 G . Too_small_size END=57732305;SVTYPE=DEL;SVLEN=-16;SVINSLEN=10;SVINSSEQ=TATATATATG TR:VR 43:3 14:0 chr2 91521676 d_1316 G . Too_low_VAF END=91522723;SVTYPE=DEL;SVLEN=-1047 TR:VR 201:7 91:1 chr20 36354143 r_303 A . PASS END=36757378;SVTYPE=DUP;SVLEN=403235 TR:VR 85:12 34:0 chr4 54193913 d_1771 T . Too_small_size END=54193958;SVTYPE=DEL;SVLEN=-45 TR:VR 35:13 13:0 chr5 29221084 d_1854 T . PASS END=29222355;SVTYPE=DEL;SVLEN=-1271 TR:VR 28:9 18:0 chr5 84734 d_1820 C . PASS END=85005;SVTYPE=DEL;SVLEN=-271;SVINSLEN=31;SVINSSEQ=CGGGTGGTCGGGGAAGCCTCGATGGGAGGCC TR:VR 28:4 19:0 chr6 57602084 r_395 A . PASS END=57668098;SVTYPE=DUP;SVLEN=66014 TR:VR 99:8 26:0 chr7 7998249 r_408_0 T [chr7:158447857[G . PASS SVTYPE=BND;MATEID=r_408_1 TR:VR 92:17 39:0 chr7 158447857 r_408_1 G [chr7:7998249[G . PASS SVTYPE=BND;MATEID=r_408_0 TR:VR 92:17 39:0 chr10 45205825 d_452 C . PASS END=45205892;SVTYPE=DEL;SVLEN=-67;SVINSLEN=1;SVINSSEQ=A TR:VR 46:3 14:0 chr12 132241268 i_328 G . PASS END=132241268;SVTYPE=INS;SVINSLEN=763;SVINSSEQ=GGCCCTCCCTATACCCATTACACACACAACACACCCCTTCCCGGGGCCCTCCCTATACCCATTACACACACGCCACACACCCTTCCCGGGGCCCTCCCTATACCCATTACACACACGCCACACACCCTTCCCGGGACCCTCCCTATACCAATTACACACACAACACACACCCTTCCAGGGGCCCTCCTATACCCATTACACACATGCCACACCCCCTTCCCAGGGCCCTCCCTATCCCCATTACACACACAACACACCCCCCTTCCAGGGGCCCTCCCTATACCCATTACACACACCACACCCCCTTCCCGGGGCCCTCCCTATACCCATTACACACACACCACACACCCTTCCAGGGGCCCTCCCTATACCCATTACACACACGCCACACACCCCTTCCCTTGGCCGTCCCTATACCCATTACACACACGCCACACCACCTTCCCGGGGCCCTCCCTATACCCATTACACACACGCATACACACCCTTCCAGGGGCCCTCCCTATACCCATTACACACACGCCACACCCCCTTCCTGGGGACCTCCCTATACCCATTACACACGCCACACACCCTTCCCGGGGCCCTCCCTATACCCATTACACACAGGCCACACCCCTTCCCAGGGACCTCCCTATCCCCATTACACACACGCCACACCCCCTTCCCGGGGCCCTCCCTATACCCATTACACACACACAACACACACCCTTCCAGGGGCCCTCCCTATACCCATTACACACACGCCACACCCCCTTCCCAG TR:VR 37:3 5:0 chr14 90175348 r_169 G . PASS END=90955460;SVTYPE=DUP;SVLEN=780112 TR:VR 74:7 33:0 chr17 79807990 r_224 G . PASS END=79869685;SVTYPE=DEL;SVLEN=-61695;SVINSLEN=33;SVINSSEQ=TGATTGTTACATGGTGATTGTAAACTAAATTTA TR:VR 61:10 32:0 chr19 19068606 d_1167 T . PASS END=19068656;SVTYPE=DEL;SVLEN=-50 TR:VR 48:7 13:0 chr20 28799104 i_899 T . Too_low_VAF END=28799105;SVTYPE=INS;SVINSLEN=412;SVINSSEQ=CCTGGTGTGCCATTTTTTAAGCCTGTTGAAAAAGTGCAGTATTAGTGTGGGAGTGACCCGATTTTCCAGGTGCCGTCTGTCATCCCTTTATTTGACTAGGAAAGGGAACTCCCTGACCACTTCCACTTCCCATGTGAGGAAATGCCTCGCTCTGCTTCAGCCCATGCATGGCACCCTGCACCCAGTATCCTGTGCCCACAGTCTGGCACTCCCTAGTGAGATGAACCTGGTATCTCAGATGGAAATGAAGAAATCACCCATCTTCTGCTTCACTCATGATGGGAACTGTAGAACAGAGCTGTTCCCATTTGGCCATCTTGACTGCTGCCTCATTTGCCAGTTTGCTTCTGTGTAGTTATTATGTGAAAATATTTCCTTTTCCACCATAGGCTGCAAAGGGCTCCAAATATCC TR:VR 193:4 86:1 chr20 383496 r_284_0 T [chr8:41437735[G . PASS SVTYPE=BND;MATEID=r_284_1 TR:VR 98:19 30:0 chr8 41437735 r_284_1 G [chr20:383496[G . PASS SVTYPE=BND;MATEID=r_284_0 TR:VR 98:19 30:0 chr20 8350180 d_1352 C . PASS END=8350488;SVTYPE=DEL;SVLEN=-308 TR:VR 71:25 15:0 chr5 30211414 r_366 A . PASS END=34324200;SVTYPE=DEL;SVLEN=-4112786;SVINSLEN=1;SVINSSEQ=A TR:VR 29:4 32:0 chr7 82507587 r_416 T . PASS END=82519265;SVTYPE=DEL;SVLEN=-11678 TR:VR 63:21 24:0 chrUn_GL000216v2 26948 d_2145 C . Too_low_VAF END=26987;SVTYPE=INS;SVINSLEN=89;SVINSSEQ=GATTCCATTCTATTCAATTCCATTCCTTTCCATTCCACTCCATTCCGTTGCTTTCCATTCCATTCCATTCAATTCCATTCCATTGCTTT TR:VR 359:6 85:1 chr1 210653881 r_55 C . PASS END=210654230;SVTYPE=DUP;SVLEN=349;SVINSLEN=221;SVINSSEQ=CAGTGGAACAGTGACGGGAATAGTGGGACGGGGAATAGTGTGACGGGGAATAGTGTGACAGGAATAGTGACAAGAGTGGAATAATGTGACGGGAATAGTGTGACAATGGAATAGTGTGACAGTGGAACAGTGTGACAGTGGAATAGTGTGACAGTGGAACAGTGTGACAGTGGAACAGTGTGAGGGGGAAAAGTGTGACGGGAATAAGTGTGATGGAATAG TR:VR 55:4 7:0 chr11 2600146 d_494 T . PASS END=2605393;SVTYPE=DEL;SVLEN=-5247 TR:VR 31:20 26:0 chr14 90185870 r_170 G . PASS END=90966036;SVTYPE=DUP;SVLEN=780166 TR:VR 69:12 33:0 chr19 19141078 r_246 T . PASS END=20111950;SVTYPE=DEL;SVLEN=-970872 TR:VR 93:11 26:0 chr2 9595959 r_266 C . PASS END=9630894;SVTYPE=DEL;SVLEN=-34935 TR:VR 33:7 20:0 chr20 39321388 r_304_0 C C]chr20:39323566] . PASS SVTYPE=BND;MATEID=r_304_1 TR:VR 29:9 16:0 chr20 39323566 r_304_1 A A]chr20:39321388] . PASS SVTYPE=BND;MATEID=r_304_0 TR:VR 29:9 16:0 chr20 9720730 d_1353 A . PASS END=9720780;SVTYPE=DEL;SVLEN=-50 TR:VR 48:31 11:0 chr5 85969510 d_1876 G . PASS END=85969592;SVTYPE=DEL;SVLEN=-82 TR:VR 18:9 7:0 chr7 109056906 r_417_0 T TAATA]chr7:110976027] . Too_low_VAF SVTYPE=BND;MATEID=r_417_1;SVINSLEN=4;SVINSSEQ=AATA TR:VR 115:4 28:0 chr7 110976027 r_417_1 G GTATT]chr7:109056906] . Too_low_VAF SVTYPE=BND;MATEID=r_417_0;SVINSLEN=4;SVINSSEQ=TATT TR:VR 115:4 28:0 chrX 116142300 r_468_0 G G]chrX:116145422] . PASS SVTYPE=BND;MATEID=r_468_1 TR:VR 55:3 13:0 chrX 116145422 r_468_1 T T]chrX:116142300] . PASS SVTYPE=BND;MATEID=r_468_0 TR:VR 55:3 13:0 chr11 68535810 i_250 A . PASS END=68535822;SVTYPE=INS;SVINSLEN=906;SVINSSEQ=TTAGCTGTGCCTGGTGGCAGGCACCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCACTTGAGCCCGGGAGGCCGTGACAGACCTACTAGTGTGCTGTCATCCCCCAAATGATAGACACTTTGCTACTTGGAATTCCCTTCACAGTGAACTAGCATGTGGGTGGTGCTACTTGAATTGGGGCTTATCCCTGATGGAGGAGTGTGGTATGCATCAGAGAGCACAGATTTTGGATCAGCCTCCTCAGAAGAGTATGACCCTCTTCTCTTCCAATCTCTGAGAGCTTGGGCAGGGAGCTTACCCTTCTTGGGTCTGTTTCCTCATATGCTGAATGAGGCTAGTAATGTTTTAATCATTGAAGAGTAGGTCCATTTTCGGTTTTCTGCATATCGATAGCCAGTTTTCCCACCACCATTTATGAAATAGGGAATCATTTCCCCATTGCTTGTTTTTGTTAGGTTTGTCAAAGATCAGATGGTTGTAGATGTGTGGCATTATTTCTGAGGCCTCTATTCTGTTCCACTGGTCTATATATCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTTGCCTTGTAGTATATATACTATATCAGTAGTGATATACTATATACAGTAGTGATGCCTCCAGCTTTGTTCTTTTTGCTTCAGATTGTCTTGGCTATACAGGCTCTTTTTTGGTTCCATATGAAATTTAAAGTAGTTTTTCCTAATTCTGTGAAGAAAGTCAATGGTAGCTTGATGGGAATAACATTGAATCTATAAATTACTTTGGGCAGTATGGCCATTTTTCATGATATTGATTCTGCCCATCCATGAGCATGGAATGTTTTTCTATTTGTGCCCTCTCTTATTTCCTTGAGAAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTT TR:VR 27:10 14:0 chr17 2042067 d_1020 T . Too_small_size END=2042103;SVTYPE=DEL;SVLEN=-36 TR:VR 29:21 18:0 chr20 39321710 r_305_0 C [chr20:39323565[GTA . PASS SVTYPE=BND;MATEID=r_305_1;SVINSLEN=2;SVINSSEQ=GT TR:VR 29:8 16:0 chr20 39323565 r_305_1 A [chr20:39321710[ACA . PASS SVTYPE=BND;MATEID=r_305_0;SVINSLEN=2;SVINSSEQ=AC TR:VR 29:8 16:0 chr3 179636871 i_1124 T . PASS END=179636871;SVTYPE=INS;SVINSLEN=116;SVINSSEQ=TAAATAAAGTAATTCAAAACTTGTATTTAATAAATGAACATCTGACTTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAT TR:VR 108:11 22:0 chr7 110148827 d_2025 C . PASS END=110148888;SVTYPE=DEL;SVLEN=-61 TR:VR 51:5 11:0 chr7 85698518 d_2017 G . PASS END=85698647;SVTYPE=DEL;SVLEN=-129 TR:VR 49:9 19:0 chrX 116764182 r_469 T . PASS END=116778704;SVTYPE=DEL;SVLEN=-14522;SVINSLEN=8;SVINSSEQ=AATTTTGT TR:VR 61:14 24:0 chr1 21281507 r_5_0 T T]chr4:35568058] . PASS SVTYPE=BND;MATEID=r_5_1 TR:VR 68:10 19:0 chr4 35568058 r_5_1 A A]chr1:21281507] . PASS SVTYPE=BND;MATEID=r_5_0 TR:VR 68:10 19:0 chr1 3694262 i_31 C . PASS END=3694262;SVTYPE=INS;SVINSLEN=423;SVINSSEQ=TGCAGCCTCAGCCCTCCCTCCTCCCTGCAATCCCAGCCATGCAGCCTCAGCCCCTCCTCCCGCAATCCCAGCCATGCAGCCTCCGCCCTCCTCCCGCAATCCCACCCATGCAGCCTCAGCCCTCCTCCCGCAATCCCACCCATGCAGCCTCAGCCCCTCCTCCCGCAATCCCAGCCCTGCAGCCTCAGCCCCTCCTCCCGCAATCCCAGCCCTGCAGCCTCAGCCCCTCCTCCTGCAATCCCAGCCATGCAGCCTCAGCCCCTCCTCCCGCAATCCCAGCCCTGCAGCCTCAGCCCCTCCTCCCGCAATCCCAGCCCTGCAGCCTCCACCCCCTCCTCCCGCAATCCCAGCCATGCAGCCTCAGCCCCTCCTCCCGCAATCCCAGCCCTGCAGCCTCCACCCCTCCTCCCGCAATCCCAGCCA TR:VR 52:3 18:0 chr10 51928570 r_73_0 C ]chr20:32459136]G . PASS SVTYPE=BND;MATEID=r_73_1 TR:VR 89:27 24:0 chr20 32459136 r_73_1 G G[chr10:51928570[ . PASS SVTYPE=BND;MATEID=r_73_0 TR:VR 89:27 24:0 chr18 62289105 r_234 A . PASS END=62574237;SVTYPE=DEL;SVLEN=-285132 TR:VR 68:11 26:0 chr2 87423590 d_1247 C . Too_low_VAF END=87423644;SVTYPE=DEL;SVLEN=-54;SVINSLEN=26;SVINSSEQ=AAGCCAGCCAACAGCCAGCCAAGCCA TR:VR 272:8 112:0 chr2 99115294 d_1319 G . PASS END=99115344;SVTYPE=DEL;SVLEN=-50 TR:VR 43:12 10:0 chr20 41912981 d_1421 C . PASS END=41913957;SVTYPE=DEL;SVLEN=-976 TR:VR 39:12 19:0 chr3 195779950 i_1144 C . Too_low_VAF END=195779950;SVTYPE=INS;SVINSLEN=99;SVINSSEQ=TGGTGACAGGAAGGAGGGGTGGCCCTGACCTGTGGATGCTGAGGAAGCATCAGGTGACAGGAAGAGGGGTGGTCGGACCTGTGGATGCTGAGGAAGTGC TR:VR 93:3 16:0 chr5 34395247 d_1855 A . PASS END=34395313;SVTYPE=DEL;SVLEN=-66 TR:VR 32:6 16:0 chr7 158336100 d_2051 C . PASS END=158336177;SVTYPE=DEL;SVLEN=-77;SVINSLEN=31;SVINSSEQ=ACCCACAGTCTCACCATAAGAGGTGACACCT TR:VR 42:13 9:0 chrX 31607357 r_448 T . PASS END=31992508;SVTYPE=DEL;SVLEN=-385151 TR:VR 34:5 21:0 chr10 56160001 r_74_0 G G[chr3:137851516[ . PASS SVTYPE=BND;MATEID=r_74_1 TR:VR 103:8 34:0 chr3 137851516 r_74_1 G ]chr10:56160001]G . PASS SVTYPE=BND;MATEID=r_74_0 TR:VR 103:8 34:0 chr18 62561172 r_235_0 A [chr3:150664377[CG . PASS SVTYPE=BND;MATEID=r_235_1;SVINSLEN=1;SVINSSEQ=C TR:VR 111:19 33:0 chr3 150664377 r_235_1 G [chr18:62561172[GG . PASS SVTYPE=BND;MATEID=r_235_0;SVINSLEN=1;SVINSSEQ=G TR:VR 111:19 33:0 chr20 28822383 r_297_0 A ]chrUn_KI270442v1:173357]TGCCCTATGGTGGAAACGGAAACATCTTCAAATTAATACTACACAGAAGCATTCAGAGAAACTTCTTTGTGATGAGTGCATTCATCACACAGAGTTGAACCTTTCTTTTGATTGAGCAGTTTTGAAACACTCTCTTTGTGATATGAAGATATTTCCATTTCTACCATAGGCCACAAAGTATTCAAAATGTCCACCTGCAGATTCTACAAAAAGAGTGTTTCCGAACTCCTCAATCAAAAGAAAGGTTCAACTCTGTGAGATGAACGCAAACGTCACAAG . Too_low_VAF SVTYPE=BND;MATEID=r_297_1;SVINSLEN=278;SVINSSEQ=TGCCCTATGGTGGAAACGGAAACATCTTCAAATTAATACTACACAGAAGCATTCAGAGAAACTTCTTTGTGATGAGTGCATTCATCACACAGAGTTGAACCTTTCTTTTGATTGAGCAGTTTTGAAACACTCTCTTTGTGATATGAAGATATTTCCATTTCTACCATAGGCCACAAAGTATTCAAAATGTCCACCTGCAGATTCTACAAAAAGAGTGTTTCCGAACTCCTCAATCAAAAGAAAGGTTCAACTCTGTGAGATGAACGCAAACGTCACAA TR:VR 317:4 162:1 chrUn_KI270442v1 173357 r_297_1 G GTTGTGACGTTTGCGTTCATCTCACAGAGTTGAACCTTTCTTTTGATTGAGGAGTTCGGAAACACTCTTTTTGTAGAATCTGCAGGTGGACATTTTGAATACTTTGTGGCCTATGGTAGAAATGGAAATATCTTCATATCACAAAGAGAGTGTTTCAAAACTGCTCAATCAAAAGAAAGGTTCAACTCTGTGTGATGAATGCACTCATCACAAAGAAGTTTCTCTGAATGCTTCTGTGTAGTATTAATTTGAAGATGTTTCCGTTTCCACCATAGGGCA[chr20:28822383[ . Too_low_VAF SVTYPE=BND;MATEID=r_297_0;SVINSLEN=278;SVINSSEQ=TTGTGACGTTTGCGTTCATCTCACAGAGTTGAACCTTTCTTTTGATTGAGGAGTTCGGAAACACTCTTTTTGTAGAATCTGCAGGTGGACATTTTGAATACTTTGTGGCCTATGGTAGAAATGGAAATATCTTCATATCACAAAGAGAGTGTTTCAAAACTGCTCAATCAAAAGAAAGGTTCAACTCTGTGTGATGAATGCACTCATCACAAAGAAGTTTCTCTGAATGCTTCTGTGTAGTATTAATTTGAAGATGTTTCCGTTTCCACCATAGGGCA TR:VR 317:4 162:1 chr10 56885996 r_75_0 T TCATGAAACT]chr10:56889713] . PASS SVTYPE=BND;MATEID=r_75_1;SVINSLEN=9;SVINSSEQ=CATGAAACT TR:VR 64:5 14:0 chr10 56889713 r_75_1 T TAGTTTCATG]chr10:56885996] . PASS SVTYPE=BND;MATEID=r_75_0;SVINSLEN=9;SVINSSEQ=AGTTTCATG TR:VR 64:5 14:0 chr11 68539340 r_114_0 T T[chr6:121936082[ . PASS SVTYPE=BND;MATEID=r_114_1 TR:VR 79:8 23:0 chr6 121936082 r_114_1 A ]chr11:68539340]A . PASS SVTYPE=BND;MATEID=r_114_0 TR:VR 79:8 23:0 chr15 90647675 i_503 C . PASS END=90647675;SVTYPE=INS;SVINSLEN=541;SVINSSEQ=CCCTCCTCGCTTCTCACCCTCCTCCTCACCCCTTCTCCTCTCCACATCCCTCCCTGCTCCACATCCCTCCGTTTCCACCCCTCCCCCTCCTCCTTCACACCCCCCTCATCCTCCACACTCCTCCCTCCCCACCCCTCCTCCTCTACACCCCGCCTCCTCCTCCACACCCCTCCCTCACCCCTCCCCTCCTCCACACTCACTCCTCCACACCCCTCCTCCTCACCCCTCCTCAACCTCCACACCCACCCCCTCCACTACCCGCTCCTCCTACCTCTTCCCTCCCTCCACACCTCCTCCTCCTCCACACCCCTCCTCCTCCTCCACATCCCTACCCCCTCCACACCCCTCCCCACCTCCACTTTTCCCCCTTCACACACCTCCTCAGTCCACCACATCCCTCCTCTCTGCCATTCCTTCCCCACCCTCCTCACCCCTCTCCCTCATCACCTCTCCTCCTCCTCCACACCCCTCCTCCCTCCACACCCCTCCTCCTCCCTCCACACCCCCTCCTCCTCCACACCCCTCCTCCCCCTCCCCCCTC TR:VR 32:3 11:0 chr17 21843766 i_553 G . Too_low_VAF END=21843766;SVTYPE=INS;SVINSLEN=288;SVINSSEQ=GCTTTTTTGCCGCCGTTTTCGCCCACAAGCCGCCGCCTGCGCTTTGTCCCCCGCCACCGGGGGTTTTGCCGCCGCCGCTTTTGGCCCCCGCCGCCGGGCTTTTTTTCCCTCACCGGCGGCGACTTTTTGCTCTCCACCGCCGCGTGTTTATGGCCGCCGGTGCTTTTTGCGCCCGCCGCCGCGGGTTTTGCCAACGCGGCTTTTTGCCCCCAGCCACCGCCCCTTTTTGTCCCCCGCCGCGGATTTTTGCCGCCGCGGCCTTTTGCCCCCCGCCGCTGCTTTGCGGCT TR:VR 84:3 30:0 chr20 28842040 r_298 T . Too_low_VAF END=29096786;SVTYPE=DEL;SVLEN=-254746;SVINSLEN=126;SVINSSEQ=CTTTTTTTAGAATCTGCAAGTGGATATTTGGAGCCTTTTGAGGCCTATGGTGGAGAAGGAAATATCTTCCATAAAAACTATGCAGAAGCATTCTGAGAAACCACTTTGTGATGCGTGCATTCACCT TR:VR 353:6 135:0 chr22 11813307 r_321_0 A [chrUn_GL000224v1:62[TGCTTCCAGGGGC . Too_low_VAF SVTYPE=BND;MATEID=r_321_1;SVINSLEN=12;SVINSSEQ=TGCTTCCAGGGG TR:VR 304:3 134:0 chrUn_GL000224v1 62 r_321_1 C [chr22:11813307[CCCCTGGAAGCAC . Too_low_VAF SVTYPE=BND;MATEID=r_321_0;SVINSLEN=12;SVINSSEQ=CCCCTGGAAGCA TR:VR 304:3 134:0 chr3 181935801 i_1126 T . PASS END=181935801;SVTYPE=INS;SVINSLEN=1389;SVINSSEQ=ATATATATAAAGTAAACGATTTTATTTGATAACCATCAAATAAAGTAAACGATTTTATTTGATAACCATCAAATAAAGTAAACGATTTTATTTGATGGTTATCAAATAAAATCGTTTATTTTATTTGATGGTTATCTTGATGAAAAGAGTCAAACTCTGTAAAATATTTGAAGAGATGTTATCTGAGCCAAATATGAGTGACCATGGCCTGTGACACAGCCCTCAGGAGTTCCTGAGAGCATGTGCCCAAGGTGGTCGGGGTACAGCTGGGTTTCATACATTTTAGGATGGCAGGAGACATTAATCAAATACATTTAAGAAACACATTAGTTTGGTCCAGAAAGGCAAGACAATTTGAAACTGGCGGGGGGCAGTGAGGGAGAAAGTGAGGAGGGAGGTTCCAGACTATAGGTAAATTTAAATATTTTCTGGTTGACAATTGGTTGAGTTTGTCTAAAAACCTGAGATCAGTAGAAGGGAATGTCTGGGTTGCCATAATAAGTTGTGAAGACCAGAGTTTTACTACGCGGGTGAAGCTTTTTGCTGGCAGGCTTCAGGGAGAATAGGTTGTAAAATGATTCCTATCAGACAAAGTCTGTGTTGTTAATGCCAAGAGGTATAATGAGGCATATCTGATCCCGTCTTCCCTTCAGGGCTTGAACTATTCTTTCAGGTTAAATTTTAAGAGCCCTGGCAGAAAAGGAAGTCCATTCAGATGGTTGGGGGCCTTAGAATTTTATTTTTGGTGTACAGTCCAATATTATAAATATTTTATTGCTCAGCTTGTGCCAGCTTCAGCCATTTGGAAATCCTTTAGGCTACTTCGGGTTTTTGGTAAGATTTCATCTCTATCTATTTATTAAAAATAATAAGTTTATAATGGTATGTTAGCTTTCAATTCAATACCATCTGGCTAATTTTAGCCCATCCTTTTTCTTTTTGTAGCTTCTTTCTTCAACAGTTATTAGGATCTTAAGCTGAACTTACTGTTCCATTGAAACCTGCCCAATAGTCCCATAGATAGTTTTTGGATAAACATAAAAATTGACCCTTCTGGTCTTAGTGCTTGAAATCTACATTGGTTTTATCTGAGTGCCTTCCTCAGGAAAGGACCCCAAGTTCTCTCAAAAAGTATCAAAGAACTGAAACTCACCAGATCTTTGCATTCAGACAATGAGATTTCAGGCCCCTCATTCATGATGATTGTTTCTGATAGGAGAGGTGTCAGAGCACTGGCACCAGGAAGCGGTTGACTCACAGGTTGGTAAAAGGAATGTTCTGACAACAGTATAGGTTTGAAAAAGGAGAGTTTATTAGAAAGGAATAATGCTGCAAAAGGGTGCAGTGGGGTGCCTCAGCAAGAGGACTGCTATATATAAAATACTATAT TR:VR 83:8 16:0 chr4 67835666 d_1774 A . Too_small_size END=67835704;SVTYPE=DEL;SVLEN=-38 TR:VR 29:8 17:0 chr1 143270299 i_85 C . PASS END=143270300;SVTYPE=INS;SVINSLEN=223;SVINSSEQ=ATCTAATGGAATGGAATGGAATAATCCATGGACTCGAATGCAATCATCATCGAATGGAATCGAATGGAATCGTCGAATGAACTTGAATGGAATAATCATTGAACGGAATCGAATGGAATCATCATCGAATGGAATCGAATGGAATCATCAAATGGAATCAGATGGAATCATCATCAAATGGAATCGAATAGAATTATGGAATGAAATCCAATGTGATCATCAT TR:VR 72:20 42:1 chr10 12984024 d_395 G . PASS END=12986059;SVTYPE=DEL;SVLEN=-2035 TR:VR 26:9 18:0 chr10 57177539 r_76 A . PASS END=58615679;SVTYPE=DEL;SVLEN=-1438140 TR:VR 100:15 31:0 chr11 68870061 d_541 G . PASS END=68870118;SVTYPE=DEL;SVLEN=-57;SVINSLEN=45;SVINSSEQ=TAGCAAAATAAAAGCAGTTAATCATACAGTAACAGGTCACGTAAT TR:VR 30:3 24:0 chr19 20378209 r_247_0 C C[chrX:130641572[ . PASS SVTYPE=BND;MATEID=r_247_1 TR:VR 77:8 31:0 chrX 130641572 r_247_1 C ]chr19:20378209]C . PASS SVTYPE=BND;MATEID=r_247_0 TR:VR 77:8 31:0 chr22 11937002 r_322 G . PASS END=11939477;SVTYPE=DEL;SVLEN=-2475 TR:VR 42:6 25:0 chr5 91967623 d_1877 A . PASS END=91967932;SVTYPE=DEL;SVLEN=-309;SVINSLEN=6;SVINSSEQ=GTATGA TR:VR 21:16 25:0 chr7 91523404 d_2018 G . PASS END=91533544;SVTYPE=DEL;SVLEN=-10140 TR:VR 41:3 24:0 chr9 1375497 r_437 T . PASS END=15612170;SVTYPE=DEL;SVLEN=-14236673 TR:VR 68:6 27:0 chr11 68870121 r_115_0 G [chr11:68874377[A . PASS SVTYPE=BND;MATEID=r_115_1 TR:VR 33:10 25:0 chr11 68874377 r_115_1 A [chr11:68870121[A . PASS SVTYPE=BND;MATEID=r_115_0 TR:VR 33:10 25:0 chr15 95485214 d_944 A . PASS END=95485269;SVTYPE=DEL;SVLEN=-55 TR:VR 24:17 12:0 chr17_KI270730v1_random 91518 d_1088 A . Too_low_VAF END=91562;SVTYPE=INS;SVINSLEN=74;SVINSSEQ=ACGGAATGGTATGGATTGTTATGGAATGGAATGCAATGGAGTGGAATGGAGTGCTGTGGGGTGGAGTGGAGTGG TR:VR 155:3 62:1 chr19 2118480 r_241 A . PASS END=2133853;SVTYPE=DEL;SVLEN=-15373;SVINSLEN=13;SVINSSEQ=GTGGCAACAAAAG TR:VR 43:6 13:0 chr2 87427283 d_1249 G . Too_low_VAF END=87427331;SVTYPE=DEL;SVLEN=-48;SVINSLEN=13;SVINSSEQ=CCAGCTAGCCAGC TR:VR 257:5 114:0 chr3 141824773 d_1617 C . PASS END=141825073;SVTYPE=DEL;SVLEN=-300 TR:VR 77:14 11:0 chr3 183132535 d_1656 T . PASS END=183136091;SVTYPE=DEL;SVLEN=-3556 TR:VR 80:8 17:0 chr3 198099432 i_1202 G . Too_low_VAF END=198099432;SVTYPE=INS;SVINSLEN=1553;SVINSSEQ=GGGAGACGCATGCAAATTTAGATTCTTGCTACAGGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATTTAGATTCTGCTGCAGGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATTTAGATTCTGCTACAGGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATTTAGATTCTGCTATGCGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATTTAGATTCTGCTACGGGATGTGGACAGTGGGAGGGGAGACGCATGCAAATTTAGATTCTGCTACAGGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATTTAGATTCTGCTACGCGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATTTAGATTCTGCTACAGGATGTGGACAGTGGGAGGAGAGACGCATGCAAATTTAGATTCTGCTACAGGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATTTAGATTCTGCTATAGGATGTGGACAGTGGGAGGGGAGACGCATGCAAATTTAGATTCTGCTACAGGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATTTAGATTCTGCTACAGGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATTTAGATTCTGCTACAGGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATTTAGATTCTGCTACAGGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATTTAGATTCTGCTACCAGGATGTGGACAGTGGGAGGGGGAGAGACGCGTGCAAATTTAGATTCTGCTACAGGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATTTAGATTCTGCTATGCTGGACACTGGGAGGGAGGATGTGGACAGTGGGGAGGAGACGCGTGCAAATTTAGATTCTGCTACAGGATGTGGACAGTGGGAGGGGAGACGTGCAAATTTAGATTCTGCTACAGGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATTTAGATTCCGCTGCAGGATGTGGACAGTGGGAGGGGAGACGTAGCGTGCAAATTTAGATTCCGCTGCAGGATGTGGACAGTGGGAGGACGCGTGCAAATTTAGATTCCGCTGCGTGCAAATTTAGATTCGGCACCGAGATTCCGCTGCAGGATGTGGACAGTGGAGGGGAGACGCGTGCAAATTTAGATTTAGCTGCAGGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATTTAGATTCTGCTACAGGATGTGGACAGTGGAGAGGAGACGCATGCAAATTTAGATTCTGCTATGCGATGTGGACAGTGGGAGGGGAGACGCATGCAAATTTAGATTCTGCTACGCGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATTTAGATTCTGCTACAGGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATTTAGATTCTGCTACAGGATGTGGACAGTGGGAGGGGAGACGACATGCAAATTTAGGATTCTGCTACAGGATGTGGACAGTGGGAGGGGAGAGCCATGCAAATTTAGATTCTGCTACAGGATGTCGGCAGTGGGAG TR:VR 146:3 19:0 chrUn_GL000216v2 50497 d_2151 C . Too_low_VAF;Too_small_size END=50527;SVTYPE=DEL;SVLEN=-30 TR:VR 149:4 38:0 chr1 38412742 i_46 C . PASS END=38412793;SVTYPE=INS;SVINSLEN=352;SVINSSEQ=ATTATACATTTTATCCAAAATGTATAATGAATTCCTATAATTCAATAATGAAAAAACTAAATAATCCAATAAAAAGTGAGCAAAAGATTTATACAGACTCATCATAAAAGAAGATACATGAATGGCCACTAAGCACATGAAAAGATGCTCAACGTCCCTGGTCATCCACGTAACGCAGATCAAAACCACAGCGAGATGAACAACAATGACTGACAATACCAAGTTTTGGTGAGGGTGTAGAGCAACTCTGACTTTCATACATTGTAATAGTGAGAATGTAAATATTACAACCACGTTGGAAAAGAGTTAGGGTGCTTCTTATAAAGTTAAACATATATATTCTCTATGATCC TR:VR 46:5 19:0 chr11 37390106 r_102_0 T [chrX:155525453[T . PASS SVTYPE=BND;MATEID=r_102_1 TR:VR 59:5 28:0 chrX 155525453 r_102_1 T [chr11:37390106[T . PASS SVTYPE=BND;MATEID=r_102_0 TR:VR 59:5 28:0 chr14_GL000225v1_random 101160 d_865 G . Too_low_VAF END=101448;SVTYPE=DEL;SVLEN=-288;SVINSLEN=87;SVINSSEQ=ATTTCTGACATACCTATGCACTGATCACCGAGGTGATGTAAATCATTTCCAGGCTTTTTTTGTACAGGGGACATTGTGATATATCTC TR:VR 573:3 262:1 chr15 96685308 d_945 G . PASS END=96689759;SVTYPE=DEL;SVLEN=-4451;SVINSLEN=2;SVINSSEQ=TT TR:VR 16:4 15:0 chr17 21969081 i_555 A . Too_low_VAF END=21969082;SVTYPE=INS;SVINSLEN=197;SVINSSEQ=TGCAATGTAATGGAGTTGAATGGAATGGAACGGCATGGAATGGAATTGAATGGATCAACCCGAGTGGAATGGAATGGAATGGAATGAAATGGAATCAACGCGAGTGGAATGGAACAGAATAAAATGGAATGGAATGGAATGGAACGGAATCAACCCGAGTGGAATGGAATGGAATGGAATGGAATATCAACCCAATG TR:VR 190:9 75:1 chr2 2594026 r_263 C . PASS END=3037662;SVTYPE=DUP;SVLEN=443636 TR:VR 86:10 32:0 chr2 90391694 d_1279 A . Too_low_VAF END=90391749;SVTYPE=INS;SVINSLEN=55;SVINSSEQ=TGGAATCACATGGAATCACCATCGAATGGAATCAAATGGAATCACCATCGAGTGG TR:VR 565:3 249:1 chr22 12402437 i_1025 G . Too_low_VAF END=12402437;SVTYPE=INS;SVINSLEN=413;SVINSSEQ=AAATTTCCTTGTGATGTGTGCATTCAACTGACAGAGTTGAACTACTCTTTTCTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGCGCAGTTGGCCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGTCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGAACTCGTGATCCGCCCGCCTCGGCCTCCCAAAGCGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCTGAACTATTCTTTTGATTGAGCAGTGTGGAGACAGTCTTTTGGTAGTATCTGAAAAT TR:VR 103:5 29:0 chr3 184526061 d_1657 A . PASS END=184526267;SVTYPE=DEL;SVLEN=-206 TR:VR 91:6 18:0 chrX 46237391 r_449 G . PASS END=46311206;SVTYPE=DUP;SVLEN=73815 TR:VR 56:4 23:0 chr1 222809841 d_364 A . PASS END=222816914;SVTYPE=DEL;SVLEN=-7073 TR:VR 58:6 16:0 chr1 39066765 d_40 G . PASS END=39067194;SVTYPE=DEL;SVLEN=-429 TR:VR 45:25 13:0 chr12 45488186 d_574 G . PASS END=45488251;SVTYPE=DEL;SVLEN=-65 TR:VR 41:16 15:0 chr14_GL000225v1_random 102207 d_866 C . Too_low_VAF END=103026;SVTYPE=DEL;SVLEN=-819;SVINSLEN=6;SVINSSEQ=ACCCAG TR:VR 584:3 268:1 chr18 69790641 d_1124 G . PASS END=69791062;SVTYPE=DEL;SVLEN=-421 TR:VR 23:14 16:0 chr2 107658015 d_1320 T . Too_small_size END=107658056;SVTYPE=DEL;SVLEN=-41 TR:VR 38:10 18:0 chr20 13118923 d_1356 A . PASS END=13118973;SVTYPE=DEL;SVLEN=-50 TR:VR 52:6 11:0 chr20 52346166 r_307_0 A ]chr3:180894189]G . PASS SVTYPE=BND;MATEID=r_307_1 TR:VR 138:9 31:0 chr3 180894189 r_307_1 G G[chr20:52346166[ . PASS SVTYPE=BND;MATEID=r_307_0 TR:VR 138:9 31:0 chr21 17336514 d_1471 A . PASS END=17336576;SVTYPE=DEL;SVLEN=-62 TR:VR 29:12 15:0 chr22 12412329 i_1026 T . Too_low_VAF END=12412329;SVTYPE=INS;SVINSLEN=347;SVINSSEQ=TTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGCGCAGTTGGCCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGTCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGAACTCGTGATCCGCCCGCCTCGGCCTCCCAAAGCGCTGGGATTACAGGCGTGAACCACCGCGCCCGGCCTGAACTATGCTTTTGATTGAGCAGTGTGGAGACAGTCTTTTGG TR:VR 106:4 33:0 chr3 144852554 d_1618 T . PASS END=144852629;SVTYPE=DEL;SVLEN=-75 TR:VR 69:6 13:0 chr4 189846273 i_1289 G . PASS END=189846273;SVTYPE=INS;SVINSLEN=2877;SVINSSEQ=TGTCCCTCGGCTCTCCCCCATTCTCCGTGCCCTGTCCCTCGGCTCTCTCCCATTCTCCGTGCCGTGTCGGCTCGGCTCTCTCCCATTCTCCGTGCCGTGTCCCTCGGCTCTCTCCCATTCTCCGTGCCGTGTCCCTCGGCTCTCTCCCATTCTCCTTGCGTGTCCCTCGGCTCTCTCCTATTCTCCGTGCCGTGTCCCTCGGCTCTCTCCCATTCTCCGTGCCCTGTCCCTCGGCTCTCTCCTATTCTCTGTGCCGTGTCCCTCGGCTCTCTCCCATTCTCCTTGCGTGTCCCTCGGCTCTCTCCTATTCTCTCGTGCCGTGTCCCTCGGCTCTCTCCTATTCTCCGTGCCGTGTCCCTCGGCTCTCTCTCATTCTCCGTGCCGTGTCCCTCGGCTCTCTCCTATTCTCCGTGCCGTGTCCCTCGGCTCTCTCCCCGTCTCTGTGCCCTGTCCCTCGGCTCTCTCCCATTCTCCGTGCCGTGTCCCTCGGCTCTCTCCTATTCTCCGTGCCCGTGTCCCTCGGCTCTCTCCCATTCTCCGTGCCGTGTCCCTCGGCTCTCTCCCATTCTCCGTGCCCTGTCCCTCGGCTTTCTCTCCTATTCTCTGTGCCGTGTCCCTCGGCTCTCTCTTCCATTCTCCTCTCGTGCCGTGTCCCTCGGCTCTCTCCCATTCTCCGTGCCGTGTCCCTGCGGCTCTCTCCCATTCTCCGTGCCCTGTCCCTCGGCTCTCTCCCCATTCTCCTTGCCGTGTCCCTCGGCTCTCTCCCCCATTCTCCGTGCCCTGTCCCTCGGCTCTCTCCTATTCTCTGTGCCGTGTCCCTCGGCTCTCTCCCAGTGATCTCCGTGCCCTGTCCCTCGGCTCTCTCCCCATTCTCCTTGCGTGTCCCTCGGCTCTCTCCTATTCTCCGTGCCGTGTCCCTCGTCTCTCTCCCATTCTCTGTGCCGTGTCCCTCGGCTCTCTCCCATTCTCCGTGCCGTGTCCCTCGGCTCTCTCCCCATTCTCCGTGCCGTGTCCCTCGGCTCTCTCCCATTCTCCGTGCCGTGTCCCTCGGCTCTCTCCCCATTCTCCGTGCCCTGTCCCTCGGCTCTCTCCTATTCTCTGTGCCGTGTCCCTCGGCTCTCTCCCATTCTCCGTGCCCTGTCCCTCGGCTCTCTCCCATTCTCCTTGCGTGTCCCTCGGCTCTCTCCTATTCTCCGTGCCGTGTCCCTCGGCTCTCTCCCATTCTCCTTGCGTGTCCCTCGGCTCTCTCCTATTCTCTGTGCGTGTCCCTCGGCTCTCTCCCATTCTCCTTGCGTGTCCCCTCGGCTCTCTCCCTATTCTCCGTGCTGTGACCCTCGGCTCTCTCCTATTCTCTGTGCCGTGTCCCTCGGCTCTCTCCTATTCTCCGTGCCGTGTCCCTCGGCTCTCTCCTATTCTCCGTGCCGTGTCCCTCGGCTCTCTCCCATTCTCTGTGCCGTGTCCCTCGGCTCTCTCCTATTCTCCGTGCCGTGTCCCTCGGCTCTCTCCCATTCTCTGTGCCGTGTCCCTCGGCTCTCTCCCTATTCTGCGTGCCCTGTCCCTCGGCTCTCTCCCATTCTCCGTGCCGTGTCCCTCGGCTCTCTCCTATTCTCCTTGCGTGTCCCTCGGCTCTCTCCCCATTCTCCGCATGCCGTGTCCCCCTCGGCTCTCTCCTATTCTCCTTGCGTGTCCCTCGGCTCTCTCCCATTCTCCGTGCCGTGTCCCTCGGCTCTCTCCCATTCTCCGTGCCGTGTCCCTCGGCTCTCTCCCATTCTCCGTGCCGTGTCCCTCGGCTCTCTCCCACTCTCCTTGCGTGTCCCTCGGCTCTCTCCCATTCTCCTTGCGTGTCCCTCGGCTCTCTCCTATTCTCCGTGCCCTGTCCCTCGGCTCTCTCCCATTCTCCGTGCCGTGTCCCTCGGCTCTCTCCCATTCTCCGTGCCGTGTCCCTCGGCTCTCTCCCATTCTCCTTGCGTGTCCCTCGGCTCTCTCCTATTCTCCGTGCCCTGTCCCTCGGAGCTCTCCCATTCTCCGTGCCGTGTCCCTCGGCTCTCTCCCATTCTCCGTGCCGTGTCCCTCGGCTCTCTCCCATTCTCCGTGCCGTGTCCCTCGGCTCTCTCCCATTCTCCTTGCGTGTCCCTCGGCTCTCTCTCCCATTCTCCTTGCGTGTCCCTCGGCTCTCTCCCATTCTCCGTGCCGTGTCCCTCGGCTCTCTCCCTATTCTCCGTGCCGTGTCCCTCGGCTCTCTCCCATTCTCCGTGCCGTGTCCCTCGGCTCTCTCCCATTCTCCGTGCCCTGTCCCTCGGCTCTCTCCCATTCTCCGTGCCGTGTCCCTCGGCTCTCTCTCCCATTCTCCGTGCCCTGTCCCTCGGCTCTCTCCCATTCTCCGTGCCCTGTCCCTCGGCTCTCTCCCATTCTCCGTGCCCTGTCCCTCGGCTCTCTCCCATTCTCCGTGCCCCCGTCCCCTCGGCTCTCTCCCATTCTCCGTGCCGTGTCCCTCGGCTCTCTCCCATTCTCCGTGCCCTGTCCCTCGGCTCTCTCCTATTCTCCGTGCCGTGTCCCTCGGCTCTCTCCCATTCTCCGTGCCCTGTCCCTCGGCTCTCTCCCATTCTCCTTGCGCCGTGTCCCTCGGCTCTCTCCTATTCTCCGTGCCCTGTCCCTCGGCTCTCTCCCATTCTCCGTTCTTGCCGTGTCCCTCGGCTCTCTCCTATTCTCCGTGCCGTGTCCCTCGGCTCTCTCCCATTCTCCGTGCCCTGTCCCTCGGCTCTCTCCTATTCTCCGTGCCGTGTCCCTCGGCTCTCTCCCATTCTCCGTGCCCTGTCCCTCGGCTCTCTCCCATTCTCCGTGCCCTGTCCCTCGGCTCTCTCCTATTCTCCGTGCCCT TR:VR 34:4 22:0 chr5 13658962 d_1848 A . PASS END=13659755;SVTYPE=DEL;SVLEN=-793 TR:VR 32:6 13:0 chr7 123357289 d_2028 C . PASS END=123357374;SVTYPE=DEL;SVLEN=-85 TR:VR 38:18 13:0 chrX 49028532 r_450_0 C [chrX:77166776[T . PASS SVTYPE=BND;MATEID=r_450_1 TR:VR 42:4 33:0 chrX 77166776 r_450_1 T [chrX:49028532[T . PASS SVTYPE=BND;MATEID=r_450_0 TR:VR 42:4 33:0 chr1 39345761 r_11 T . PASS END=39346823;SVTYPE=DEL;SVLEN=-1062 TR:VR 53:22 14:0 chr10 132126464 d_474 G . Too_small_size END=132126499;SVTYPE=DEL;SVLEN=-35 TR:VR 38:3 22:0 chr11 44219406 d_503 C . PASS END=44219529;SVTYPE=DEL;SVLEN=-123 TR:VR 28:8 16:0 chr13 24338836 d_605 C . Too_small_size END=24338871;SVTYPE=DEL;SVLEN=-35 TR:VR 19:4 16:0 chr17 22159065 r_215_0 T T[chrUn_KI270442v1:38139[ . PASS SVTYPE=BND;MATEID=r_215_1 TR:VR 128:9 55:1 chrUn_KI270442v1 38139 r_215_1 G ]chr17:22159065]G . PASS SVTYPE=BND;MATEID=r_215_0 TR:VR 128:9 55:1 chr19 21697450 r_248_0 T [chr8:14487425[GT . PASS SVTYPE=BND;MATEID=r_248_1;SVINSLEN=1;SVINSSEQ=G TR:VR 106:7 34:1 chr8 14487425 r_248_1 T [chr19:21697450[CT . PASS SVTYPE=BND;MATEID=r_248_0;SVINSLEN=1;SVINSSEQ=C TR:VR 106:7 34:1 chr2 29334901 d_1228 T . PASS END=29336100;SVTYPE=DEL;SVLEN=-1199 TR:VR 21:5 15:0 chr20 13761725 r_286_0 T T]chrX:97118493] . PASS SVTYPE=BND;MATEID=r_286_1 TR:VR 89:7 32:0 chrX 97118493 r_286_1 A A]chr20:13761725] . PASS SVTYPE=BND;MATEID=r_286_0 TR:VR 89:7 32:0 chr21 19303643 d_1472 T . Too_small_size END=19303681;SVTYPE=DEL;SVLEN=-38 TR:VR 21:5 19:0 chr3 195780492 i_1150 A . Too_low_VAF END=195780492;SVTYPE=INS;SVINSLEN=51;SVINSSEQ=GGCGTGGTGTCACCTGTGGATACTGAGGAAGGCTGGTGACAGGAAGAGGGG TR:VR 93:3 16:0 chr7 94406942 d_2020 A . PASS END=94407075;SVTYPE=DEL;SVLEN=-133 TR:VR 44:14 8:0 chr17 257988 r_209_0 G [chr17:276229[A . PASS SVTYPE=BND;MATEID=r_209_1 TR:VR 32:10 24:0 chr17 276229 r_209_1 A [chr17:257988[A . PASS SVTYPE=BND;MATEID=r_209_0 TR:VR 32:10 24:0 chr2 113138071 r_275 C . PASS END=113285847;SVTYPE=DUP;SVLEN=147776;SVINSLEN=10;SVINSSEQ=TCTCCCAGCT TR:VR 50:8 35:0 chr2 29468667 d_1229 A . Too_small_size END=29468704;SVTYPE=DEL;SVLEN=-37 TR:VR 22:8 13:0 chr20 14645298 r_287_0 A [chr7:105469540[A . PASS SVTYPE=BND;MATEID=r_287_1 TR:VR 100:6 25:0 chr7 105469540 r_287_1 A [chr20:14645298[A . PASS SVTYPE=BND;MATEID=r_287_0 TR:VR 100:6 25:0 chr21 21856391 d_1473 T . Too_small_size END=21856435;SVTYPE=DEL;SVLEN=-44 TR:VR 26:8 15:0 chr22 12526219 d_1516 A . Too_low_VAF END=12526499;SVTYPE=DEL;SVLEN=-280;SVINSLEN=110;SVINSSEQ=AATATCTTCACATAAAAACTAAACAGAAGCATTATGAGAAACTTTTTCAAGATGTGTACATTCAACTCACAGAGTTGAAGCTATCTTTTTATTGAGCAGTTTTGAAACTC TR:VR 64:3 40:1 chr4 20666889 r_350 T . PASS END=20694634;SVTYPE=DEL;SVLEN=-27745 TR:VR 27:5 23:0 chr5 140598631 d_1887 T . PASS END=140598956;SVTYPE=DEL;SVLEN=-325 TR:VR 32:16 14:0 chr8 100308625 d_2106 A . PASS END=100308685;SVTYPE=DEL;SVLEN=-60 TR:VR 27:23 10:0 chr8 48167659 i_1554 T . PASS END=48167659;SVTYPE=INS;SVINSLEN=111;SVINSSEQ=TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGATTTTATCTCATTTTATTGTTATTTTTTTTTTTTTTTTTTTTTTATTATACTCT TR:VR 45:8 10:0 chrX 5189020 d_2237 T . PASS END=5189140;SVTYPE=DEL;SVLEN=-120 TR:VR 11:7 13:0 chr1 39779184 r_12_0 C C]chr20:50837505] . PASS SVTYPE=BND;MATEID=r_12_1 TR:VR 63:9 17:0 chr20 50837505 r_12_1 G G]chr1:39779184] . PASS SVTYPE=BND;MATEID=r_12_0 TR:VR 63:9 17:0 chr11 69726083 r_116_0 T T]chr11:69737479] . PASS SVTYPE=BND;MATEID=r_116_1 TR:VR 55:4 15:0 chr11 69737479 r_116_1 A A]chr11:69726083] . PASS SVTYPE=BND;MATEID=r_116_0 TR:VR 55:4 15:0 chr13 25151616 d_606 A . PASS END=25151668;SVTYPE=DEL;SVLEN=-52 TR:VR 23:7 17:0 chr17 258128 r_210_0 T T]chr22:17119349] . PASS SVTYPE=BND;MATEID=r_210_1 TR:VR 57:10 21:0 chr22 17119349 r_210_1 G G]chr17:258128] . PASS SVTYPE=BND;MATEID=r_210_0 TR:VR 57:10 21:0 chr17 82643117 d_1058 T . PASS END=82655411;SVTYPE=DEL;SVLEN=-12294 TR:VR 60:9 13:0 chr18 70855802 r_238_0 G [chr4:89203491[ATATG . PASS SVTYPE=BND;MATEID=r_238_1;SVINSLEN=4;SVINSSEQ=ATAT TR:VR 51:7 32:0 chr4 89203491 r_238_1 G [chr18:70855802[ATATG . PASS SVTYPE=BND;MATEID=r_238_0;SVINSLEN=4;SVINSSEQ=ATAT TR:VR 51:7 32:0 chr19 22928615 r_250_0 A AAAA[chr3:147890049[ . Too_low_VAF SVTYPE=BND;MATEID=r_250_1;SVINSLEN=3;SVINSSEQ=AAA TR:VR 102:3 28:0 chr3 147890049 r_250_1 A ]chr19:22928615]TTTA . Too_low_VAF SVTYPE=BND;MATEID=r_250_0;SVINSLEN=3;SVINSSEQ=TTT TR:VR 102:3 28:0 chr2 115983138 d_1321 T . PASS END=115983237;SVTYPE=DEL;SVLEN=-99 TR:VR 39:12 19:0 chr20 14645660 r_288_0 T T[chr7:105459780[ . PASS SVTYPE=BND;MATEID=r_288_1 TR:VR 90:6 24:0 chr7 105459780 r_288_1 T ]chr20:14645660]T . PASS SVTYPE=BND;MATEID=r_288_0 TR:VR 90:6 24:0 chr20 55678628 i_932 A . PASS END=55678632;SVTYPE=INS;SVINSLEN=63;SVINSSEQ=AACTTAAAAAAAAATGGATCTATTAACCAACTTACAAACTTAAAAAAAAATGGATCTATTAAC TR:VR 43:7 6:0 chr21 22910031 r_313 C . PASS END=22942705;SVTYPE=DEL;SVLEN=-32674 TR:VR 28:9 28:0 chr22 15801088 d_1517 T . PASS END=15801185;SVTYPE=DEL;SVLEN=-97 TR:VR 56:11 22:0 chr8 49710929 r_427 G . PASS END=58144410;SVTYPE=DEL;SVLEN=-8433481;SVINSLEN=8;SVINSSEQ=TTATCCAA TR:VR 93:8 35:0 chr1 39779304 r_13_0 C [chr20:50837552[T . PASS SVTYPE=BND;MATEID=r_13_1 TR:VR 63:5 17:0 chr20 50837552 r_13_1 T [chr1:39779304[T . PASS SVTYPE=BND;MATEID=r_13_0 TR:VR 63:5 17:0 chr11 47615362 d_506 T . Too_small_size END=47615403;SVTYPE=DEL;SVLEN=-41;SVINSLEN=4;SVINSSEQ=CTCC TR:VR 34:11 17:0 chr14_GL000225v1_random 55924 d_738 T . Too_low_VAF END=56403;SVTYPE=DEL;SVLEN=-479;SVINSLEN=3;SVINSSEQ=GAT TR:VR 734:6 400:1 chr16 159830 i_505 G . PASS END=159830;SVTYPE=INS;SVINSLEN=111;SVINSSEQ=GTTGTGAGGGTGCCCGGGGATGGCTTGTGGGGCACAGGTTGTGAGGTGCCCGGGACGGCTTAATGAGGCACAGGTTGTGAGACGTGCCTGGGACGGCTTGTGGGGCACAGG TR:VR 34:3 17:0 chr17 82846042 r_225 C . PASS END=82858852;SVTYPE=DEL;SVLEN=-12810;SVINSLEN=4;SVINSSEQ=TGTC TR:VR 44:14 30:0 chr18 72488044 r_239_0 A A]chr18:72496478] . PASS SVTYPE=BND;MATEID=r_239_1 TR:VR 25:5 24:0 chr18 72496478 r_239_1 A A]chr18:72488044] . PASS SVTYPE=BND;MATEID=r_239_0 TR:VR 25:5 24:0 chr20 14938345 r_289_0 G ]chrX:91249623]T . PASS SVTYPE=BND;MATEID=r_289_1 TR:VR 78:8 15:0 chrX 91249623 r_289_1 T T[chr20:14938345[ . PASS SVTYPE=BND;MATEID=r_289_0 TR:VR 78:8 15:0 chr20 29096787 r_300_0 C [chrUn_KI270587v1:8[TTTTTTAGAATCTGCAAGTGGATATTTGGAGCCTTTTGAGGCCTATGGTGGAGAAGGAAATATCTTCCCATAAAAACTATGCAGAAGCATTCTGAGAAACCACTTTGTGATGCGTGCATTCACCTA . Too_low_VAF SVTYPE=BND;MATEID=r_300_1;SVINSLEN=125;SVINSSEQ=TTTTTTAGAATCTGCAAGTGGATATTTGGAGCCTTTTGAGGCCTATGGTGGAGAAGGAAATATCTTCCCATAAAAACTATGCAGAAGCATTCTGAGAAACCACTTTGTGATGCGTGCATTCACCT TR:VR 200:3 83:0 chrUn_KI270587v1 8 r_300_1 A [chr20:29096787[AGGTGAATGCACGCATCACAAAGTGGTTTCTCAGAATGCTTCTGCATAGTTTTTATGGGAAGATATTTCCTTCTCCACCATAGGCCTCAAAAGGCTCCAAATATCCACTTGCAGATTCTAAAAAAA . Too_low_VAF SVTYPE=BND;MATEID=r_300_0;SVINSLEN=125;SVINSSEQ=AGGTGAATGCACGCATCACAAAGTGGTTTCTCAGAATGCTTCTGCATAGTTTTTATGGGAAGATATTTCCTTCTCCACCATAGGCCTCAAAAGGCTCCAAATATCCACTTGCAGATTCTAAAAAA TR:VR 200:3 83:0 chr20 5570539 d_1351 A . PASS END=5570626;SVTYPE=DEL;SVLEN=-87 TR:VR 61:4 10:0 chr21 23540264 d_1474 G . PASS END=23540328;SVTYPE=DEL;SVLEN=-64 TR:VR 22:7 17:0 chr3 147149837 d_1622 G . PASS END=147150175;SVTYPE=DEL;SVLEN=-338 TR:VR 67:9 11:0 chr4 21813332 d_1737 T . Too_small_size END=21813376;SVTYPE=DEL;SVLEN=-44 TR:VR 27:20 19:0 chr1 42868929 r_14 A . PASS END=42883206;SVTYPE=DEL;SVLEN=-14277;SVINSLEN=4;SVINSSEQ=AGCA TR:VR 65:11 20:0 chr10 59895893 r_77_0 T T]chr16:66404235] . PASS SVTYPE=BND;MATEID=r_77_1 TR:VR 84:9 38:0 chr16 66404235 r_77_1 C C]chr10:59895893] . PASS SVTYPE=BND;MATEID=r_77_0 TR:VR 84:9 38:0 chr11 47642684 r_103_0 T [chrX:91249378[G . PASS SVTYPE=BND;MATEID=r_103_1 TR:VR 62:8 23:0 chrX 91249378 r_103_1 G [chr11:47642684[G . PASS SVTYPE=BND;MATEID=r_103_0 TR:VR 62:8 23:0 chr11 70767993 r_117_0 A [chr11:70771545[G . PASS SVTYPE=BND;MATEID=r_117_1 TR:VR 38:10 18:0 chr11 70771545 r_117_1 G [chr11:70767993[G . PASS SVTYPE=BND;MATEID=r_117_0 TR:VR 38:10 18:0 chr12 52882280 d_577 T . PASS END=52883114;SVTYPE=DEL;SVLEN=-834 TR:VR 60:10 17:0 chr18 7412376 d_1098 G . PASS END=7412609;SVTYPE=DEL;SVLEN=-233 TR:VR 37:21 24:0 chr2 117909203 d_1323 A . PASS END=117909254;SVTYPE=DEL;SVLEN=-51 TR:VR 42:11 13:0 chr20 14939455 r_290_0 C C[chrX:91249673[ . PASS SVTYPE=BND;MATEID=r_290_1 TR:VR 79:7 15:0 chrX 91249673 r_290_1 T ]chr20:14939455]T . PASS SVTYPE=BND;MATEID=r_290_0 TR:VR 79:7 15:0 chr3 147359336 d_1623 G . PASS END=147359399;SVTYPE=DEL;SVLEN=-63 TR:VR 58:4 19:0 chr3 90697107 d_1599 C . Too_low_VAF END=90697214;SVTYPE=INS;SVINSLEN=107;SVINSSEQ=AAAGCACACTAAATATACACTGGCAAATTCCAGAAAAAGGGTGTTTCAAAGCTGCTGTATCAACAGAAAGTTTAAAGTCTGTGAGGTGAACACACAAATCACAAAGT TR:VR 61:3 10:0 chr7 158623758 r_425_0 C C]chr7:159294220] . PASS SVTYPE=BND;MATEID=r_425_1 TR:VR 85:9 24:0 chr7 159294220 r_425_1 A A]chr7:158623758] . PASS SVTYPE=BND;MATEID=r_425_0 TR:VR 85:9 24:0 chr9 26539505 r_439 G . PASS END=26603801;SVTYPE=DEL;SVLEN=-64296 TR:VR 71:10 26:0 chr1 226397196 d_368 C . Too_small_size END=226397234;SVTYPE=DEL;SVLEN=-38 TR:VR 51:7 10:0 chr10 63580706 r_78_0 T T[chr4:131768137[ . PASS SVTYPE=BND;MATEID=r_78_1 TR:VR 68:4 29:0 chr4 131768137 r_78_1 T ]chr10:63580706]T . PASS SVTYPE=BND;MATEID=r_78_0 TR:VR 68:4 29:0 chr11 48450392 d_507 A . PASS END=48450484;SVTYPE=DEL;SVLEN=-92 TR:VR 50:10 24:0 chr11 70780179 r_118_0 C C]chrX:156029923] . Too_low_VAF SVTYPE=BND;MATEID=r_118_1 TR:VR 222:3 185:0 chrX 156029923 r_118_1 T T]chr11:70780179] . Too_low_VAF SVTYPE=BND;MATEID=r_118_0 TR:VR 222:3 185:0 chr12 54342939 r_132_0 C [chr16:72939459[G . PASS SVTYPE=BND;MATEID=r_132_1 TR:VR 81:13 42:0 chr16 72939459 r_132_1 G [chr12:54342939[G . PASS SVTYPE=BND;MATEID=r_132_0 TR:VR 81:13 42:0 chr20 16047767 r_291 C . PASS END=16629023;SVTYPE=DUP;SVLEN=581256;SVINSLEN=2;SVINSSEQ=CA TR:VR 113:7 25:0 chr20 57271217 r_308_0 A [chr20:57271470[A . PASS SVTYPE=BND;MATEID=r_308_1 TR:VR 44:12 25:0 chr20 57271470 r_308_1 A [chr20:57271217[A . PASS SVTYPE=BND;MATEID=r_308_0 TR:VR 44:12 25:0 chr5 143520744 d_1889 T . PASS END=143521303;SVTYPE=DEL;SVLEN=-559 TR:VR 33:7 19:0 chr8 109410892 d_2107 C . PASS END=109411480;SVTYPE=DEL;SVLEN=-588 TR:VR 25:15 13:0 chr8 51500074 r_428 T . PASS END=64047188;SVTYPE=DUP;SVLEN=12547114 TR:VR 73:14 21:0 chrX 55601732 d_2240 C . PASS END=55614182;SVTYPE=DEL;SVLEN=-12450;SVINSLEN=65;SVINSSEQ=CTTTATATATTCTTTTTATATATATATCCTTTATGTATATATTCTTTATATATATCCTTTATATA TR:VR 43:17 24:0 chr1 227673963 r_56 G . PASS END=227677112;SVTYPE=DUP;SVLEN=3149 TR:VR 68:6 14:0 chr10 64601533 r_79 A . PASS END=67257998;SVTYPE=DEL;SVLEN=-2656465;SVINSLEN=1;SVINSSEQ=T TR:VR 72:20 27:0 chr11 71117218 r_119_0 C [chr16:61409790[T . PASS SVTYPE=BND;MATEID=r_119_1 TR:VR 71:10 22:0 chr16 61409790 r_119_1 T [chr11:71117218[T . PASS SVTYPE=BND;MATEID=r_119_0 TR:VR 71:10 22:0 chr12 55737237 d_578 G . Too_small_size END=55737273;SVTYPE=DEL;SVLEN=-36 TR:VR 43:20 13:0 chr13 27198572 d_607 G . Too_small_size END=27198618;SVTYPE=DEL;SVLEN=-46 TR:VR 21:7 11:0 chr20 17742949 d_1357 A . PASS END=17743084;SVTYPE=DEL;SVLEN=-135 TR:VR 47:22 18:0 chr20 29261884 i_906 G . Too_low_VAF END=29261884;SVTYPE=INS;SVINSLEN=679;SVINSSEQ=GTGAACATTTCTTTTAAATGAACCAGTTTTGAGACACTCTTTTTGTACAATCTGCAAGTGGATATTTGGAGTGCTTAAGGCCTATGGTGGAAAAGGAAATATTTTCACATAAAAACTAGACAGAAGCATTTTGAGAAACTTCTTTGTGATGTGTGTATTCAACTAACAAAGTTGAACCTTTCTTTTGATAGAGCAGCTTTGAGACACTCTTTTTGTATAATCTGCAAGTGGATATTTGGAGCGCTACGTGGCCTATGGTGGAAAAGGAAATATCTTAACATAAAAACTAGACAGAAGCATTCTGAGAAAGTTCTTTGTGATGCATGCTTTCAACTCACAGGCTTCTGAGCCTCTTTTGATTTAGCAGTTTTCAAACACTCTTTTTGTAGAATCTGCAAGTGGAGATTTGGAGTGACTTGAGGCCTATGGTGGAATAGGAAATATCTTTACACAAAAACTAGGCAGTAGCATTCTGAGAAACTTCTTAGGGATATGTGTGTTCATTTCACAGAGTTGAACCTTTGTTTTGATTGAGCAGTTTAGAAAAACTCTTTTTGTAAAATCTGCAATATTTGAAGCATTTGAGGTGTATGGTGGAAAAGGAAATATCTTCACATAAAAACTAGACAGAAGAATTCTGAGAAACTTCTTTGTGATGTGTGCATTCATCTCACAGAAT TR:VR 252:6 79:0 chr4 30753932 r_351_0 T [chr4:30847756[T . PASS SVTYPE=BND;MATEID=r_351_1 TR:VR 62:9 30:0 chr4 30847756 r_351_1 T [chr4:30753932[T . PASS SVTYPE=BND;MATEID=r_351_0 TR:VR 62:9 30:0 chr6 60495185 i_1393 T . PASS END=60495185;SVTYPE=INS;SVINSLEN=71;SVINSSEQ=AAAAAAATCTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAAAAAAAAAAAAAAAAAAAA TR:VR 47:12 12:0 chr8 111813259 r_435 A . PASS END=111863254;SVTYPE=DEL;SVLEN=-49995;SVINSLEN=1;SVINSSEQ=C TR:VR 39:5 26:0 chrX 1183406 d_2231 G . PASS END=1183798;SVTYPE=DEL;SVLEN=-392 TR:VR 15:10 12:0 chr10 64640523 r_80_0 T ]chr16:73051435]A . PASS SVTYPE=BND;MATEID=r_80_1 TR:VR 70:16 21:0 chr16 73051435 r_80_1 A A[chr10:64640523[ . PASS SVTYPE=BND;MATEID=r_80_0 TR:VR 70:16 21:0 chr11 48812284 d_509 G . PASS END=48812286;SVTYPE=INS;SVINSLEN=123;SVINSSEQ=ACAGAAACATTCTGAGAAACTTCTGTGTGATGTGTGTATTCATCTCAAATATTTGAACCTTTCTTTTGATTGAGCAACTTGAAAAACACTTTTTGTAGTATCTGCAAGTGGATATTTGGAGCA TR:VR 50:7 15:0 chr11 71614430 r_120_0 G [chr11:71632684[A . PASS SVTYPE=BND;MATEID=r_120_1 TR:VR 74:12 26:0 chr11 71632684 r_120_1 A [chr11:71614430[A . PASS SVTYPE=BND;MATEID=r_120_0 TR:VR 74:12 26:0 chr12 57102115 d_579 C . PASS END=57104634;SVTYPE=DEL;SVLEN=-2519 TR:VR 55:10 13:0 chr13 27796829 r_146 C . PASS END=28371830;SVTYPE=DUP;SVLEN=575001 TR:VR 55:9 29:0 chr19 7596172 r_242 G . PASS END=7624938;SVTYPE=DEL;SVLEN=-28766 TR:VR 83:10 19:0 chr8 113263829 d_2108 A . PASS END=113266777;SVTYPE=DEL;SVLEN=-2948;SVINSLEN=1;SVINSSEQ=G TR:VR 31:6 15:0 chrX 119281900 d_2269 C . PASS END=119282035;SVTYPE=DEL;SVLEN=-135 TR:VR 32:11 15:0 chr1 46240426 r_16_0 G [chr19:36222835[GT . PASS SVTYPE=BND;MATEID=r_16_1;SVINSLEN=1;SVINSSEQ=G TR:VR 86:5 43:0 chr19 36222835 r_16_1 T [chr1:46240426[CT . PASS SVTYPE=BND;MATEID=r_16_0;SVINSLEN=1;SVINSSEQ=C TR:VR 86:5 43:0 chr10 64935383 r_81_0 A A]chr16:73137035] . PASS SVTYPE=BND;MATEID=r_81_1 TR:VR 68:25 20:0 chr16 73137035 r_81_1 T T]chr10:64935383] . PASS SVTYPE=BND;MATEID=r_81_0 TR:VR 68:25 20:0 chr11 71617963 r_121 T . PASS END=71632783;SVTYPE=DEL;SVLEN=-14820 TR:VR 71:12 22:0 chr16 18802804 d_955 G . PASS END=18802949;SVTYPE=DEL;SVLEN=-145 TR:VR 32:10 13:0 chr16 51640520 d_996 T . Too_small_size END=51640558;SVTYPE=DEL;SVLEN=-38 TR:VR 20:10 16:0 chr18 10472 d_1095 T . Too_low_VAF END=10574;SVTYPE=INS;SVINSLEN=203;SVINSSEQ=GGCCTGGCCTGGCCTGGCCTGGCCTGGCAACCCTGGCAGCCTGGCCCTGGCCCTAACCCTAACCCTGGCCCTCAACTGGCCTGGACCCCGACCCTTGGCCTGGCCCCTGGCCCTGGACTCCCCTGACCCTGACCTGGCCTGGCCCTGGCCTGGCCTCAACCTGGCCTGGCCTGGCCCAACCCTGGCCTGGCCTGGCCCCTGGC TR:VR 88:4 48:0 chr20 29284632 i_907 A . Too_low_VAF END=29284632;SVTYPE=INS;SVINSLEN=512;SVINSSEQ=AGTTCAAATCCGTGTGATGAATGCACACATTATGAAGAAGTTTTTCAGAATGCTTCTGTCTAGTTTTTATGTGAAGATATTTCTTTATCTCCATAGACCTCAAAACGCTCAGATATATCCCACTGCAGATACTATGAAAAGACTGTTTCCAATCTGCTCAATCAAAAGAAAGCTTCTATGCTGTGAGAAGAAAGAACCCATTATAAGGAAGCTTCTCAGAATGCTTCTGTCTAATTTTCTGTGAAGATATTTCCTTTTTCACCATAGGCCGCAAACCTCTCACAAATATCCCTCTGCAGATAGTACAAAAAGACTCTTTCTGAACTGTGCATTCACAAGAAAGGTTCTACTCTGTGAGATTAATACACACGTCAGAAATAAGTTTCTCAGAATGTTCTGTCTAGTTTTTATGTGAATATATTTCCTATTTCACTTTAGGCCTCAAGGGGCTGAAAAATATCCCTTTGCAGATTGTACAGTAAGACTGTTTCAGAACTGATCAATGAAAAGAA TR:VR 100:4 21:0 chr6 108650144 d_1959 C . PASS END=108653257;SVTYPE=DEL;SVLEN=-3113 TR:VR 43:7 20:0 chr7 128107990 d_2030 C . PASS END=128108058;SVTYPE=DEL;SVLEN=-68 TR:VR 50:4 15:0 chr8 52577822 d_2095 A . PASS END=52578544;SVTYPE=DEL;SVLEN=-722 TR:VR 52:21 21:0 chr9 39517911 r_441 C . PASS END=42271757;SVTYPE=DUP;SVLEN=2753846 TR:VR 94:8 35:0 chrX 122117410 r_470_0 A [chrX:137827983[T . PASS SVTYPE=BND;MATEID=r_470_1 TR:VR 88:6 28:0 chrX 137827983 r_470_1 T [chrX:122117410[T . PASS SVTYPE=BND;MATEID=r_470_0 TR:VR 88:6 28:0 chr1 152434310 d_341 G . PASS END=152434560;SVTYPE=DEL;SVLEN=-250 TR:VR 63:8 17:0 chr1 230873462 d_369 T . Too_small_size END=230873501;SVTYPE=DEL;SVLEN=-39 TR:VR 40:19 17:0 chr10 65153733 r_82_0 A [chr19:4446033[G . PASS SVTYPE=BND;MATEID=r_82_1 TR:VR 59:10 29:0 chr19 4446033 r_82_1 G [chr10:65153733[G . PASS SVTYPE=BND;MATEID=r_82_0 TR:VR 59:10 29:0 chr11 72324285 r_122_0 A ACTCC]chr11:72324820] . PASS SVTYPE=BND;MATEID=r_122_1;SVINSLEN=4;SVINSSEQ=CTCC TR:VR 41:4 15:0 chr11 72324820 r_122_1 A AGGAG]chr11:72324285] . PASS SVTYPE=BND;MATEID=r_122_0;SVINSLEN=4;SVINSSEQ=GGAG TR:VR 41:4 15:0 chr16 56931201 d_997 G . PASS END=56931577;SVTYPE=DEL;SVLEN=-376 TR:VR 29:14 13:0 chr2 127878821 i_852 A . PASS END=127878825;SVTYPE=INS;SVINSLEN=234;SVINSSEQ=GTTGAGTTGGCCACTAAATAAAATACACATCAAGGGCATTTCCGATTGAGATCAAAGCTCTCTGTGGCCGAAGAATAATAGCTTGTACATTCTCATGCCTTGCTTGAAATAGGGGCTTCTCTCTTTCCCCTCTCCTCCCCCTCCTCTCTCTCTCTCTCTCTCTCTTTCTTTTTCTTTAAGAGACAGGTCTCATTCTGTCACCCACCCTGGAGTGCACTAAATAACCAATTCAAC TR:VR 42:8 13:0 chr2 3434482 r_265_0 C C[chrX:31404986[ . PASS SVTYPE=BND;MATEID=r_265_1 TR:VR 43:7 32:0 chrX 31404986 r_265_1 A ]chr2:3434482]A . PASS SVTYPE=BND;MATEID=r_265_0 TR:VR 43:7 32:0 chr2 89790248 i_791 T . PASS END=89790248;SVTYPE=INS;SVINSLEN=197;SVINSSEQ=ATGATTACACTCAATTATGATTGCATTTGATTCCATTCTATGATTCCATTCTATTCCATTCAATGATAATTCCAATCGAGTCCATTTGATGATTCCATTAGATTCTATTCGATGATTCCATACGAATCCTTTTGATGATGATTCCTTTCGAGTCCATTCGATTATTCCATTCGAGTCCATTCAATGATGATTTTACT TR:VR 77:5 21:0 chr3 186123811 d_1667 T . Too_small_size END=186123847;SVTYPE=DEL;SVLEN=-36 TR:VR 79:14 10:0 chr3 195782919 i_1158 G . Too_small_size END=195782919;SVTYPE=INS;SVINSLEN=47;SVINSSEQ=AAGTGTCGGTGACAGGAAGAGGGTGGCATGACCTGTGGATGCTGAGG TR:VR 91:16 15:0 chr4 32498604 d_1740 A . PASS END=32499252;SVTYPE=DEL;SVLEN=-648 TR:VR 37:15 11:0 chr8 52614644 d_2096 G . Too_small_size END=52614680;SVTYPE=DEL;SVLEN=-36 TR:VR 49:8 15:0 chr9 40033991 d_2119 G . Too_small_size END=40034032;SVTYPE=DEL;SVLEN=-41 TR:VR 31:6 10:0 chrX 122710408 r_471_0 A A]chrX:140091191] . PASS SVTYPE=BND;MATEID=r_471_1 TR:VR 72:6 26:0 chrX 140091191 r_471_1 C C]chrX:122710408] . PASS SVTYPE=BND;MATEID=r_471_0 TR:VR 72:6 26:0 chr10 66446157 r_83_0 G G]chr4:189980237] . Too_low_VAF SVTYPE=BND;MATEID=r_83_1 TR:VR 86:3 47:0 chr4 189980237 r_83_1 C C]chr10:66446157] . Too_low_VAF SVTYPE=BND;MATEID=r_83_0 TR:VR 86:3 47:0 chr2 127918212 d_1325 A . PASS END=127920501;SVTYPE=DEL;SVLEN=-2289 TR:VR 23:5 15:0 chr4 32715671 r_352 C . Too_low_VAF END=168399409;SVTYPE=DUP;SVLEN=135683738 TR:VR 98:3 40:0 chr6 170377002 i_1456 C . PASS END=170377003;SVTYPE=INS;SVINSLEN=4710;SVINSSEQ=CGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCCTAAACCCAGACGCCCCGGGAGAACACAGGCTCCACGCTGCTCGGTGCTGTGCACGCGTCCCTAAACCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCTGTCCCAGACGCCCGGGAGAACACCATGCAGGCTCAGGCTGCTCGGTGCTGTGCACACGCGTCCCTAATCCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCTAATCCCAGACGCCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCTAAACCCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCTCCTAAACCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCTAATCCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCTAAACCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCTAATCCCCCAGACGCCCGGGAGAGCACCGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCTTAATCCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCTAATCCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCTAAACCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCTAATCCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCTAATCCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCTAAACCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGGTGCACACGCGTCCCTAAACCCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCTAATCCCAAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCTAAACCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGCGCACACGCGTCCCTAAACCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCTAAACCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGACGGGTGCTGTGCACATCGCCGTCCCTAAACCCAGGACGCCCGAGGAACTGGAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCCCTAATCCCAGACGCCCGGGGAGAACACGAGGCTCACGCTGCTCGGTGCTGCGCACACGCGTCCCCTAATCCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCTAATCCCAGACGCCCGGGAGAGCACCGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCCTAATCCCAGACGCCCGGGAGAACACACAGAATCACGCTGCTCGGTGCTGTGCACACGCGTCCCCTAATCCCAGACGCCCGGGAGAACACAGGCTCACGCGCTGCTCGGTGCTGTGCACACGCGTCCCTAAACCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCTAACCCCAGACGCCCGGGAGAACACAGGCTGCACGCTGCTCGGTGCCGTGCACACGCGTCCCTAAACCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCCGTGCACACGCGTCCCTAATCCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCCGTGCACACGCGTCCCTAAACCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCCGTGCACACGCGTCCCTAAACCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCCGTGCACACGCCCCTAAACCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCCGTGCACACGCGTCGTCCCTAATCCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCCGTGCACACGCGTCCCTAATCCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCCGTGCACACGCGTCCCTAAACCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCTAAACCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCTAAACCCAGACGCCCGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCCTAATCCCAGACGCCCGGGAGAACACAGGCTCACGCTGCCGGGTGCTGTGCACACGCGTCCCCTAATCCCAGACGCCCGGGAGAACCACAGGCTCCACGCTGCTCGGTGCCGTGCACACGCGTCCCTAATCCCAGACGCCCGGGAGAGACACAGAGGCTCACGCTGCCCGGTGCTGTGCACACGCGTCCTCTAAACCCAGGCACCCGGGAGAACACGGGCCCACGCTGCTCCGGTGCTGTGCACACGCGTCCCCTAAACCCAGGCACCGAGGAGAAAACACAGGCTCACACGCTGCTCCGGTGCTGTGCACGCGTCCCTAATCCCGGCCGGGAGAACAGGCTCACGCTTGCCGGTGCTGTGCACGCGTCCCGGAGGCCGAGCTCCGCTTGCTCGGTGCTGCCTGCCTGCCCCACTAATCCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGCTGCACACGCGTCCCTAATCCCAGAAGCCCCGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCCAGCCCCAGCCGCCCGGGAGAACACCGGCTCCTGCTGCTCGGTGCTGTGCACACGCGCTCCCTAATCCCAGACGCCCGGGAGAGCTGGAGGCTCCACGCTGCCTCGGTGCTGTGCACACGGCGTCCCCTGTCCCAGACGCCCGGGAGAACTGAGGCTCACGCTGCTCGGTGCTGTGCCACACGCGTCCCTAATCCCAGACGCCCGCGGAGAACACAGGCTCACGCTGCTGGGTGCTGTGCACACGCGTCCCACATCCCAGACGCCCGGGAGAACACAGGCTCACGCTTGCTCGGTGCTGTGCACACGCGTCCCTCGACCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGGTGCTGTGCACACGCGTCCCTAATCCCAGAACGCCAGGGGAGAACCACAGGCTCCACGCTGCTCGGTGCTGTGCACACGCGTCCCTCGGCCCGGCTTCCCGGGAGAACACAGGCTCCACGCTGCTCGGTGCTGTGCACACGCGTCCCTAATCCCAGACGCCGGAGAACCCACCACAGGCTCACGCTGCTCGGTGCTGTGCGGCACGCGTCCTAAACCCCGGAGCGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCTAAACCCAGACGCCCGGGAGAACACAGGCTCACGCTTTGCGGTGCTGTGCACACGCCGTCCCAATCGCTTGCGACCCGGGAGAACACAGGCTCACGCGCTGCGGTGCTGTGCACACGCGTCCCTAAACCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCTAATCCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCGCAATCCCAGACGCCCGGGAGAACTCAGGCTCGCGCTGCTCGGTGCTGTGCACGCGCGTCCCCAAACCCAGACGCCCCCGGGAGAACACTGAGCTCACGCTGCTCGGTGCTGGCCACCCACGCGTCCCTAAACCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCTAAACCCCGGACGCCCGGGAGAACACCCAGGCTCACGCTGCTGGGTGCTGTGCACACGCGTCCCCTCAAGCACGGACGCCACTGCCCAGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCTGATCCCAGACGCCTTCCGGAGAACACAGGCTCACGCCAGCTCGGTGCTGTGCACACGCGTCCCTGATCCCAGACGCCCGGGAGAACACCGCGGCTCACGCTGCTCGGTGCTGTGCACACGCGCGTCCCTGATCCCAGACGCCCGGGAGAGTACAGGCTCACGCTGCCTCGGTGCTGTGCACACGCGTCCCTGATCCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCTAATCCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCTAAACCCAGACGCCAGGCTGAGCTCAGGCTCACGCTACCCGGTGCTGTGCACACGCGCCCCCTAAACCCAGACGCCCCGGGAGAACACAGGCACCAAGCACAGCAGTGTGCTGTGCACCACGCGTCCCTAATCCCAGACGCCCGGGAGGAACACAGGCTCACGCTTGCAGGGTGCTGTGCACACGCGTCCCCTAATCCCAGACGCCCG TR:VR 42:10 8:0 chr7 13307136 r_410 C . PASS END=53096113;SVTYPE=DEL;SVLEN=-39788977 TR:VR 76:5 34:0 chrX 58427057 d_2242 G . PASS END=58427174;SVTYPE=INS;SVINSLEN=119;SVINSSEQ=TTAGATTTAACTCCATAAGACAAATGAACTCATGACAAAGCAGTTACTCAAAAATCTTATTTCTATTTTTTTCTCTGAAGGTATTTCCTTTTTCACCATAGGCCTCAGTGTGCTGTGAA TR:VR 29:6 7:0 chr11 78309895 d_546 C . PASS END=78310043;SVTYPE=DEL;SVLEN=-148 TR:VR 24:21 23:0 chr12 132787650 i_345 T . Too_small_size END=132787650;SVTYPE=INS;SVINSLEN=48;SVINSSEQ=CCCCGGGAGACCACGGGACCCCTCCCCAGAACCCCTGGGACCCTTCCC TR:VR 50:3 11:0 chr12 63834452 d_582 G . PASS END=63834521;SVTYPE=DEL;SVLEN=-69 TR:VR 40:7 20:0 chr18 10638 r_226_0 T T]chr21:46699981] . Too_low_VAF SVTYPE=BND;MATEID=r_226_1 TR:VR 132:5 72:0 chr21 46699981 r_226_1 G G]chr18:10638] . Too_low_VAF SVTYPE=BND;MATEID=r_226_0 TR:VR 132:5 72:0 chr2 35718587 r_267 G . PASS END=35734119;SVTYPE=DEL;SVLEN=-15532 TR:VR 40:10 19:0 chr20 19505035 i_880 T . PASS END=19505035;SVTYPE=INS;SVINSLEN=4031;SVINSSEQ=GGCATGCTAGTATCCTTGGCATAAAAGAGGTCTAGGTAATTCAAGGCTACTGACTGCAGGGAAGATAGGGCATACGTGGGTAAGAGTGGATACTCCCACACCCAGGCCCTCCTGTTAACATGGGTGAAAGCTGCTTTGACACCCATGGGCACCCTGTTGCAGTTGCCCAGAGTGGGGATACTAGGTGAGAGGAAAGAAGAAGGAATGCCTGACTTTCCTTCCCTCATGTGCCTTAGGTATTTGCTAGCAAGAGAAAGGAACCAGGATGCCTGTTCCCTTCTTTCTAAATGAGTATTCATCTCCAGTCTGGACCCCTTTTGAATGCATCCTGAACCCCTGGACTCCTTTGAAAAAAAAATTCCTTCTTTTTTCCTTTCTTCTCTTCTATCTCCTCTTCACTGACAGGTAATTGTGTTTCCATACTATAAGACACTCCTCTCAGATGCATCATCCAAAATGAGAAGAATTAATTTCCCAAACTTTAAACTGGTTGGCTTAGGATTGGGCTCAGGGGAAGGGAACCCAGAAGCCCAACATACCAGCAAAAGGGTAAAGGTTTTTTTTACAAGTTGGGCCTAAAGCCCCCCTCTCCCTGTGCAAACTAGTAAAAAGCCTTGGGATTTTTGAGCTCTTCTTACCCTACCCCTGTCCTTCTTTCATTCTGATACATATTTTCTAATAATCTCACCTTCAAGCCATCAGACTCAAAATTGTCATGTAACTGGAGCCTCAGAAGATGTTCCCTTCTGCTGAGAACCTGTAGATAGGCCTCTGAGGGAGATCTGCCGTTTTCCCCAAAACAGCACCCCCTGTCAGCAGGAAGCAGTTAAGATCAATCTTTAGCCTTGTCTTTAACGTTATTCTAATGGCAGTTGGATGTACTTCTTCAGGGGAGGAAATGAGACATCCAATAAAAAGGGCTCCCTGCAGAATCTTCAACTGGCCCACACAGTGGGAGGATGGGGTGGAGCCTAGGGAAGTTCACACCATTTGCAGAGGGGAGGAGCCTGGCCTCTCCTGACCCTGTGAAGTAACCTGGGATTCAATCTGTGAGGTGGGGGCCTGTTAACAGGAACCGCTCTCACTTTGCTGTGTTGTTTTTCCTTTTACCTTTTTGCCCATTAGATTCTGTAACCCCCTCACGCTTCAAAGTGTCTGTGAGCCTCATCTTTCCTGGTGGTGTGACAAGAACCAGGTTTTTAGCTGAACTAAAGAGAAAGTCCTGCAACATATTAATTCAATGAAATGCGACTCAGTCACACCAAGGAATAAACTAGTGGTACATAAAACAGTATGAATAAAACTCAAAATAATTGTGCTGAGTAAGATTATTTAGTCAAACCTATTATATACTGCCTGATTCTAGTTTGGGGAAAATCTGGAAAATGCAGAATAATCCCTAGTGACAAAGCAGATCAGTAGATATCAGAGAATTTTTGATGGGGTAGAAAGAAGGGGAACAGATTGCAAAACAGCAAATGGAAATTTGATAGGTGATGAATATGTTGTTTGTGGTAATGGTTTCACAGGTTTATGGATATATCAAACCTCATCAAACTACAACTGTTAAATACATCACATTCATTGTATGTCAATTTTAACGAGTCTACAAAAGTGGAACAAAGGAACTGATAAAATTGAAAATCAGGAATGAAAAGACATGTATAAATAAGTGATAACTTTAACTCAACTACTAATTGCTTAGAATACAGCTTTATTCCCCCCAAATTTTTACTTCCTATATGTTATTTGGCCTTGACTGAATAAACAATTTTTGCCTAGATGTTTGGATCCACATTTTAATTAGAATGACCACGCAAAGGAATGGGTTTCCCCAAACATTTTTGAAATAATTAAGAGTAACATTTTTCTGTTCAATAAACACAATTATATCTTTCCTAGGAACTTTAAAGTAGATTAGCATTCATAATCTAGCTGAAACCATTACAGTTCTTATTTCTTCACTAAGACATTCTATTTTTCTACTAAGATGCAAATATGTTATTTGGGAAAATAAGCACATTAAATCACTAGTAACCACTAGAGATGTTGTTCAATTAGCTCAATAGTCTCTCTCTATGAGGCTCAGTTGATGGTGTCAGGGTGGGTTGCTCCTCAGGACAAAGAAGTAATTGACTTTATAAAATAAGATAATTCCAAGCCCCTGGGTAAACAGCCAGATGGGAGGCATTAGAGAACCAAATTACTAGTATAACTGAACTCAAGTCTGGCTGCTCACCGCCTGAGAAGCTGAATATACAAGAGGTGAGTTGTGGTGAAAGGAAAGCAACTTTATTTATCAAATGCCAGTGGCTGAGGAGATGGTCAGGCTAAGGCCTCCAAGACACCATCTCAAATTTTAGGCTTAGTGAGGGGTTTTAAGAAAGAAAACTTCGAATGAAAATGAAGGAGTGGGGCAGGGTGCAGGTTCTATATGTCTTGTCCTGATGGCTATCTTAAGTTATTGTTAATCTGGAATGCAGACTGGTGCCATCTTAACAATGGCTGGGTTGTAGATTAACCACCTTAAGGTTATCCCTAGATGGGGAAGAATTCTGCAGCTGAGTCTCCAGGCCTGGTTTATTTCAGGAATAGCCCCTGCAATCTCCAAGCAAGCATATATTTAGATAAGTTAGCACAGTGCAAGAGAGTGTTTGTTGGGAAGGGAGGGAAACAAGGTTTAAAAGTACATTTCAAGGCTAAGACCAGAGACAAGAAAAAAAGTTTTAAAATGCATTCTGAAGCTAGGCCAGTTGGTAACACCAGGAAAGAACAAAAGAATGAAGAATTAGTCATAATCATAATCCTAACTAAAGATTACATGTTCTTGGTCTGAAATTGCTTTTGCTATTTAGACTCATAGGCATATTTAGACATAGAAGGATTTTCATTCTTAGTCCTTTTAAAAGTATACATTTTTTTAAAGTACGGAATTTTTAGCCATCTAAAAGCATATTGGTTATTTTAAATCTGCAAAGTTTACATAAGTGACATTAATTTTTGTTCTTCTACCTATGAATACAAATGGTCTTGCTGTCAAGCTGGAGAGCAGAAAATATTCTGGCAATTTTATGTTACGCAGCTAACAAAATCTTCTCATGACATTTTAGATTTTAGATAATACCATCAATCATTCATTCAGTCAATATATTTATGGAAGGCTTATTAAGCTCCAAGCCTAGGTTAATAATGAAGAAACAAATTTATAAGACATATAGATTAGTTTTCAACCATTGTTTGATTTGAAGTTGTTTAATATTGAAATTTTAATTACGTTAGGCCTGCTCACAAAAAATCATTAAAAATATCTGTCATTGATGTATATGTTATGTTCTATTTTATTTTATATATTAAACTAATGTATTTGATAGAGGAAAATATAGTCTCTGACCACCAGGTCTACAAAAAGTGACAGAAGCAGCGAGGAATAAAACCTTTAGCAAAGTAAATACATGATTCCTAAAGGTAAAGGTAATTGGATAATTGGTCTTGGTTTAGTTTTTCTACCTTGTCCTTCTGCTTTTAACTCTGGAATGGGAAATTGTGTTCTGAAAAGCTTAAAAAATTAGTTTGTGAGGAGTGATTTGCATCTGATTGGTGATGAGCACATGACTCTCTTGGGCAATTTTCCTGCTAAATGTGGATGTATTTTCAGAGAGATATATAAGATAGATCGAAATCTCTGAAACCAATAAGATCATGTGTAAATTTCAGATGATGGCAATATGGGCATTTATTTTAAAGTAAATTAGAAGTTTTAAAAAATTACCAAGTATTGATTTATGATAGTATGTGCTAGACTTAATTAGCAGCTTTATTAATATGCAATTGAATAAGCTGAATCACTTAAGGCAGCATATTTTATTTGAATAAAAAAGGAAAATAATTTGATGTCAGCAATGGAAGATAAAGTATAGGGTACAATCCTGATTAATAGGTACCAATTAAGATACTAAAAATATGAAGAATAAAGATTGAAGGGAGACTAGGAAAACATGCATGCATTTACATGTACACACATGGAAATGCAT TR:VR 62:33 21:0 chr3 152138446 d_1627 A . Too_small_size END=152138486;SVTYPE=DEL;SVLEN=-40 TR:VR 85:10 9:0 chr3 187065116 d_1669 G . PASS END=187067612;SVTYPE=DEL;SVLEN=-2496 TR:VR 91:8 14:0 chr3 195787652 i_1160 C . PASS END=195787652;SVTYPE=INS;SVINSLEN=3624;SVINSSEQ=CTGACCTGTGGATGCTGAGGAAGTGTTGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATGCTGAGGAAGCGTCGGTGACAGGAAGAGGCGTGGCGTGACCTGTGGACACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGAGGTGGCGTGACCTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGAGGTGGCGTGACCTGTGGATGCTGAGGAAGTGCTGGTGACAGGAAGAGGGGTGACGTGACCTGTAGATACTGAGGAAGTGCTGGTGACAGGAAGAGGGGTGGTGTGACCTGAGGATGATGAGGAAGGGATGGTGACAGGAAGAGAGGTGGCGTGACCTCTGGATACTGAGGAAGTGTTGGTGACAAGAAGAGGGGTGGTGTCACCTGTGGATACTGAGGAAAGGCTGGTGACAGGAAGAGGGTGGCCTGACCTGTGGATGCTGGAGGAAGTGTCCTGTGACAGGAAGACGGGTGGTGTCACCTGTGGATGCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATACTGAGGAAGCGTCGGTGACAAGAAGAGGGGGTGGTGTCACCTGTGGATACTGAGGAAAGGCTGGTGACAGGAAGAGGGGTGGCCCGACCTGTGGATGCTGAGGAAGTGTCGGTGACAGGAAGAGAGGTGGTGTGACCTGAGGATGCTGAGGAAGGGGATGGTGACAGGAAGAGGCGTGGTGTCACCTGTTGATACTGAGGAAAGGCTGGTGACAGGAAGAGGGGTGGCCTGACCTGTGGATGCCGAGGAAGCGTACGTGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATACTGAGGAAAGGCTGGTGACAGGAAGAGGCGTGGCGTGACCGGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGACCGGTGGATGCCGAGGAAGCTGCCGGTGACAGGAAGAGGGTGGTGTCACCTGTGGATACTGAGGAAAAGCTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGTCGTGGTGTCACCTGTGGATACTGAGGAAAGGCTGGTGAGAGGAAGAGGGGTGGCGTGACCTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGACCGGTGGATGCCGAGGAAGCGTCGGTGACAGGAAGAGGGTGGGTGTCACCTGTGGATACTGAGGAAAAGCTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATACTGAGGAAGTGTCGGGTGACAGGAAGAGGCGTGGTGTCACCTGTGGATACTGAGAAAAGCTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGACCGGTGGATGCTGAGGAAGCGCCGGTGACAGGAAGAGTGCTGGTGTCACCTGTGGATGCTGAGGAAGGGATGGTGACATGAAGAGGGGTGGTGTGACCTGTAGATGCTGAGGAAGGGCTGGTGACAGGAAGAGGGTGGTGTCACCTGTGGATGCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGTGTGACCTGTAGATGCTGAGGAAGTGCTGGTGACAGCAACAGGGGTGGCGTGACCGGTGGATGCTGAGGAAGGGCTAGTGACAGGAAGAGGCATGGTGTCACCTGTGGATACTGAGGAAGTGTTGGTGACAGGAAGAGGGGTGGCCTGACCTGTGGATGCCGAGGAAATGTCGGTGACAGGAAGACGGGTGGTGTCACCTGTGGAAGCTGAGGAAAGGCCGGTGACAGGAAGAGGTGGGTGGCGTGACCTGTGGATGCTGAGGAAGTGTTGGTGACAGGAAGAGGGGTGGCCTGACCTGTGGATGCCGAGGAAATGTCGGTGACAGGAAGACGGGTGGTGTCACCTGTGGAAGCTGAGGAAAGGCCGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATACTGAGGAAGTGTCGGTGACAGGCACAGGGGTGGTGTCACCTGTGGATGCTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGCGTGACCTGTGGATGCTGAGGAAGTCTCGGTGACAAGAAGAGGGGTGGTGTCACCTGTGGATGATGAGGAAGTGTCGGTGACAGAAGAGAGGTGGTGTCACCTGTGTATGCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCCTGACCTGTGGATGCTGAGGAAGCCGCCGGTGACAAGAAGAGGAGTGGCGTGACCTGTGGATGCTGAGGAAGGGCTAGTGACAGGAAGAGGCGGCGTGGTGTCACCTGTGGATACTGAGGAAAGGCTGGTGACAGGAAGAGGGGTGGCCTGACCTGTGGATGCTGAGGAAGTGTCGGTAACAGTGGGGAAGAGGGGTGGTGTCACCTGTGGATGCTGAGGAAGTGCTGGTGACAGGAAGAGCGGTGGCCTGACCTGTGGATGCTGAGGAAGTGTCGGTGACAGGAAGAGGCTGGTGGTGTGACCTGTGGATGCTGAGGAAGGGGCTAGTGACAGGAAGAGGCGTGGTGTCACCTGTGGATACTGAGGAAAGGCTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATGCTGAGGAAGTGTCGGTGACAGGAAGCGGGGTGGCGTGACCCGGTGGATGCTGAGGAAGGGCTGGTGACATGAAGAGGGTTGGCGTGACCTGTGGATGCTGAGGAAGTGTCGGTGACAGGAAGCGGGGTGGCGTGACCGGTGGATGCTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGCGTGACCTGTGGATAGTTGGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGACCTATGGATGCTGAGGAAGTGTCGGTGACAGGAAGAAGGGTGGCGTGACCTGTGGATGCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATGCTGAGGAAGTGTCGGTGTCAGGAAGAGGGGTGGCGTGACCTGTGGATGCTGAGAAGTGTCGGTGACAGGAAGAGAGGTGGCGCGACCTGTGGATGCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATACTGAGGAAAGGCTGGTGACAGGAAGAGGGGTGGCCTGACCTGTGGATGCTGAGGAAGTGTCGGTGACAGGAAGAGGCGATGGTGTCACCTGTGGATACTGAGGGAAAGGCTGGTGAGAGGAAGAGGGGTGGCGTGACCTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGGGGGTAGCGTGACCTGTGGACACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGACACTGAGGAAGCGTCGGTGACAGGAAGAGAGGTGGCGTGACCTGTGGACACTGAGGAAGCGTCGGTGACAGGAAGAGGGGGTGGTGTGACCTGAGGATGCTGAGGAAGGGATGGTGACAGGAAGCGAGGTGGCGTGACCTGTGAACACTGAGGAAGCGTCGGTGACAGGAAGAGAGGTGGCGTGACCTGTGGACACTGACGAAGCGTCGGTGACAGGAAGAGGGGGTGGTG TR:VR 82:7 15:0 chr3 198103082 i_1213 A . Too_low_VAF END=198103082;SVTYPE=INS;SVINSLEN=1964;SVINSSEQ=GAGACGCGTGCAAATTTAGATTCCCTGCAGGATGTGGACAGTGGGAGGAGACGCGTGCAAATTTAGATTCCGCTGCAGGATGTGGACAGTGGGAGGGGAGACGCATGCAAATTTAGATTCTGCTACAGGATGTGGACAGTGGGAGGGGAGACGCATGCAAATTTAGATTCCGCTGCAGGATGTGGACAGTGGGAGGAGACGCGTGCAAATTTAGATTCCCCTGCAGGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATTTAGATTCCGCTGCAGGATGTGGACAGTGGGAGGGAGACGCATGCAAATTTAGATTCTGCTACAGGATGTGGACAGTGGGAGGGGAGACGCATGCAAATTTAGATTCCGCTGCAGGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATTTAGATTTAGCTGCAGGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATTTAGATTCTGCTACAGGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATTTAGAATTCTGCTACGCGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATTTAGATTCTGCTACGGGATGTGGACAGTGGGAGGGGAGACGCATGCAAATTTAGATTCTGCTACAGGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATTTAGATTCTGCTACAGGATGTGGACAGTGGGAGGGGAGGGAGACGCCTGCAAATTTAGGTTCTGCTACAGGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATTTAGATTCTGCTACAGGATGTGGACAGTGGGAGGGAGACGCGTGCAAATTTAGATTCTGCTATGGGGATGTGGACAGTGGGAGGGTAGACGCTTGCAAATTTAGATTCTGCTGCAGGATGTGGACAGTGGGAGGGGAGACGCATGCAAATTTAGATTCCGCTGCAGGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATTTAGATTCCGCTGCAGGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATTTAGATTCTGCTACAGGATGTGGACAGTGGAGGAGGAGACGCGTGCAAAATTTAGATTCTGCTGCAGGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATTTAGATTCCTGCTACAGGATGTGGACAGTGGGGAGGGGAGACGCATGCAAATTTAGATTCTGCTACAGGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATTTAGATTCTGCTACAGGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATTTAGATTCTGCTACAGGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATTTAGATTCTGCTGCAGCGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATTTAGATTCTGCTACAGTGATGTGGACAGTGGGAGGGAGACGCGTGCAAATTTAGATTCTGCTACACGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATTTAGATTCTGCTACAGGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATTTAGATTCTGCTACAGGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATTTAGATTCTGCTATGCGATGTGGACAGTGGGAGGGAGAAGTGCATGCAAATTTAGGATTCTGCTACAGGATGTGGACAGTGGGAGGGGAGACGCATGCAAATTTAGATTCTGGCTACAGGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATTTAGATTAGGTCTGCAATGGATGTGGACAGTGGGAGGGGAGAGCAGCGTGCAAATTTAGATTCTGCTACAGGATGTGGACAGTGGGGAGGGGAGACGCGTGCAAATTTAGATTCTGCTACGCGATGTGGACAGTGGGAGGGGAGACGCTGATGCAAATTTAGATTCTGCTACAGGATGTGGACAGTGGGAGGGGAGACGCATGCAAATTTAGATTCTGCTACAGGATGTGGACAGTGGGAGGG TR:VR 148:4 21:0 chr6 116483853 d_1960 G . Too_small_size END=116483892;SVTYPE=DEL;SVLEN=-39;SVINSLEN=1;SVINSSEQ=C TR:VR 39:15 9:0 chr7 140984180 d_2031 C . Too_small_size END=140984221;SVTYPE=DEL;SVLEN=-41 TR:VR 50:28 22:0 chr9 400709 i_1581 T . PASS END=400709;SVTYPE=INS;SVINSLEN=1648;SVINSSEQ=CCCACCACCACCACCTCCACACACACACCTCCCACCACCACCACCTCCACCACCACCACCACCTCCACCACCACCACCTCCACCACCACCACCACCTCCACCACCACCACCTCCACCACCACCACCTCCACCACCTCCACCACACACCACCTCCACCACCTCCACCACCACACACCCACCTCCCACCACCACCACACTCCCACCACCACCACCACCTCCACCACCACCACACTCACCACCACCTCCACCACCACCACCTCCACCACCACCACCACCACCACCTCCCACCTCCACCACCACCACCTCCACACATACACCACCACACTCCACCATCACCACCTACCTACCACCACCACACACCATCACACTCCCACCAGCACCACTTCCACCACCACCATCACCTCCCACCACCTCCACCCACCACCACACCTACCACCACCACCACCTCCACCACCACCACCACCTCCACCACCACCACCATCACCACCACCACCACCACCACCACCACCACCACCACCTCCACCACCACCACCATCACCACCACCTCACACCACCTCCACCACCACCACCACCTCCACCACCACCACCATGACCACCAACCTCACCACCTCCACCACCACCACCTCCACCACCACCAACACCTCCACCACCTCCACCACCACCACCACATACCACCACCTCCACCACCACCACCACCTCCACCACCATACACCTCCACCACCACCTCCACCACAGACCACCATGGCCACCTCACCACCTCTACCACCACGGTCCACCACCACCACCACCAGGCACCACACCACACCACCACACAGGACCACCACCTCCACCACCAGGTGCCACCACCACCTCCACCACCACCACCACCTCCACCACCACCACCACCTCACACACCACCACCACCACCACCTCCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCTGGGGACCTCCACCACCATTTGGGTGGGGACCACCACCACCACACTCCACCACCACCACCTCCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACTGTACCACCACCACACTCACACCACCACCACCACCACCACCACCACCACCTCCACCACCACCACCTCCACCACCACCACCACCACCACCACCACCACCTCCACACACTCCACCACCACCTCACCACCACCACCACCTCACCCACCACCACCACCTCCACCACCACCACCACCACCACCATCACCACCACACTCACACCACCACCACCACCACCACCACCACCACCTCCACCACCACCACCACCTCCACCACCACCACCACCTCCACCACCACCACCACTCACCACCACCACCCACCTCCTCCACCACCACCACCACCACCACACACACCACCACCACCACCACCACACTCACACCACCACCACCACCACCACCACCTCCACCACCACCTCCACACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCTCCACCACACACTCACCACCACCACCACCACCACCACCACCTCCACCACCACCACCACCACCACCACCACCACCACCACCACCACCTCCACTGCCACCACCACCACCACCTCCACCACCAC TR:VR 41:4 12:0 chrX 123495120 d_2270 C . PASS END=123495287;SVTYPE=DEL;SVLEN=-167 TR:VR 27:14 16:0 chr1 154906104 d_342 T . PASS END=154906171;SVTYPE=DEL;SVLEN=-67 TR:VR 44:27 14:0 chr10 67228662 r_85_0 A A[chr16:73303184[ . PASS SVTYPE=BND;MATEID=r_85_1 TR:VR 70:12 23:0 chr16 73303184 r_85_1 A ]chr10:67228662]A . PASS SVTYPE=BND;MATEID=r_85_0 TR:VR 70:12 23:0 chr11 48824752 i_239 G . PASS END=48824752;SVTYPE=INS;SVINSLEN=509;SVINSSEQ=AAACTTTCCTTTGATAGAGCAGTTTGGAAACACTCTTTTTATATTAACTGCAAATGGATATTTGGAGTGCTTTGAATCCTATAGCTGAAAAGGAAATATCTTCACATAAAAGCTAGACTGAAGCATTCTCAGAAACTTCTTTGTAATGTGTGCATTCAAATCTTGAGTGGAACCATTCTTTTGATTGAGCAGTTTGGAAACACTCTTTTTGTAGTAACTGCAATTGGATATATGCAGTGCATTGAGACCTATATCTGAAAAGGAAATATCTTCATATAAAAACTACACAGAAGTATTCTGAGAAACTCTGTTATGTGTGTATTCATCTCACAGAGATAAACAATTGTTTTGATTGAGAAGTTTTGAAACAATCTTTTTGTAGAATCTTCAATTGTTTACTTGGTGCACTTTGAGGCCTGTGGTGGAAAAGGAAATATCTTCACATAGAAACTAGAAAGAAGTATTCTCAGAAACGTCTTTGTGATGTGTGCATTCATCTCTCATTGTTG TR:VR 45:5 12:0 chr21 38943716 d_1475 G . PASS END=38944199;SVTYPE=DEL;SVLEN=-483 TR:VR 35:11 12:0 chr3 152541555 r_336 T . PASS END=152557438;SVTYPE=DEL;SVLEN=-15883;SVINSLEN=18;SVINSSEQ=AGAATTAGAATTAGAATG TR:VR 117:9 30:0 chr3 198104189 i_1214 C . Too_low_VAF END=198104190;SVTYPE=INS;SVINSLEN=808;SVINSSEQ=GTGCAAATTTAGATTCTGCTGCAGGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATTTAGATTCCGCTGCAGGATGTGGACAGTGGGAGAGGAGACGCGTGCAAATTAGGATTTTGCTACAGGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATTTAGATTCTGCTATGCGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATCCTAGATTCTGCTACGCGATGTGGACAGTGGGAGGGGAGACGCTGCTGCAAATTTAGATTCTGCTACGGGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATTTTAGATTCTGCTACAGGATGTGGACAGTGGGAGGGGAGACGCATGCAAATTTAGATTCCGCTGCAGGATGTGGATGGCAGTGGGAGACGCGTGCAAATTTAGATTCTGCTGCAGGATGTGGACAGTGGGGAGAGGGAGACGAGTGCAAATTTAGATTCTGCTGGCAGGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATTTAGATTCTGCTACGCGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATTTAGATTCTGCTACAGGATGTGGACAGGGAGGGGAGACGCGTGCAAATTTAGATTCTGCTGGCAGGATGTGGACAGTGGGAGGGGGAGACGCGTGCAAATTTAGATTCTGCTACAGGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATTTAGATTCTGCTACAGGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATTTAGATTCTGCTACAGGATGTGGACAGTGGGAGGGGGAGACGCGT TR:VR 147:4 21:0 chr4 36962487 d_1741 T . PASS END=36962633;SVTYPE=DEL;SVLEN=-146 TR:VR 29:7 13:0 chr4 75736155 r_357 C . PASS END=132894937;SVTYPE=DEL;SVLEN=-57158782 TR:VR 55:15 29:0 chr5 151840066 r_382_0 C [chr7:73475264[T . PASS SVTYPE=BND;MATEID=r_382_1 TR:VR 75:4 32:0 chr7 73475264 r_382_1 T [chr5:151840066[T . PASS SVTYPE=BND;MATEID=r_382_0 TR:VR 75:4 32:0 chr6 116484610 d_1961 A . PASS END=116487173;SVTYPE=DEL;SVLEN=-2563 TR:VR 42:15 12:0 chr6 170377196 i_1458 C . PASS END=170377196;SVTYPE=INS;SVINSLEN=2572;SVINSSEQ=AGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCTAAACCCAGACGCCCGGGGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCTAAACCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCTAAACCCAGACGCCCGGAGAGCACGCGGCTCACGCCTGCTCGGTGCTGTGCACACGCGTCCCTAATCCCAGACGCCCTGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCTAATCCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCTAATCCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCTAAACCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCTAATCCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCTAATCCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCTAATCCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCTAAACCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCTAAACCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCTAATCCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCTAAACCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCTAATCCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCTAAACCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCTAAACCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTTCGGTGCTGTGCACACGCGTCCCTAAACCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCTAATCCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCTAATCCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCTAATCCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCTAAACCCAGACGCCCGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCTAAACCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCTAAACCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCTAATCCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCCTAAACCCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCTAAACCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCTAATCCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCTAATCCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCTAATCCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCTAATCCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCCTAATCCCAGACGCCCGGGAGAACACAGGCTCACGCGCTGCTCGGTGCTGTGCACACGCGTCCTAAACCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCTAAACCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCTAAACCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCTAATCCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCTAATCCCAGACGCCCGGGAGAACACAGGCTCCACGCTGCTCGGTGCTGTGCACACGCGTCCCTAAACCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCTAATCCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCCCTAATCCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCCTAATCCCAGACGCCCGGGAGAACACAGGCTCACGCTGCTCGGTGCTGTGCACACGCGTCCTAAACCCAGACGCCCGGGAGAACACAG TR:VR 42:3 8:0 chr8 58306747 d_2097 A . PASS END=58306800;SVTYPE=DEL;SVLEN=-53 TR:VR 65:5 14:0 chrX 127404328 d_2271 C . PASS END=127404383;SVTYPE=DEL;SVLEN=-55 TR:VR 41:10 18:0 chr1 232670257 r_58 C . PASS END=234942403;SVTYPE=DEL;SVLEN=-2272146 TR:VR 93:11 13:0 chr10 67258103 r_86_0 T T[chr16:72781023[ . PASS SVTYPE=BND;MATEID=r_86_1 TR:VR 66:4 26:0 chr16 72781023 r_86_1 C ]chr10:67258103]C . PASS SVTYPE=BND;MATEID=r_86_0 TR:VR 66:4 26:0 chr14 20505264 r_153_0 C [chr17:20038316[CCTCCCCCTCCCCTCCCCTCCCCTCTCCCCTCCCCCTCCCCCTCCCCCTCCA . PASS SVTYPE=BND;MATEID=r_153_1;SVINSLEN=51;SVINSSEQ=CCTCCCCCTCCCCTCCCCTCCCCTCTCCCCTCCCCCTCCCCCTCCCCCTCC TR:VR 56:4 31:0 chr17 20038316 r_153_1 A [chr14:20505264[GGAGGGGGAGGGGGAGGGGGAGGGGAGAGGGGAGGGGAGGGGAGGGGGAGGA . PASS SVTYPE=BND;MATEID=r_153_0;SVINSLEN=51;SVINSSEQ=GGAGGGGGAGGGGGAGGGGGAGGGGAGAGGGGAGGGGAGGGGAGGGGGAGG TR:VR 56:4 31:0 chr16 6068351 r_193_0 T T[chrX:71333810[ . PASS SVTYPE=BND;MATEID=r_193_1 TR:VR 78:7 27:0 chrX 71333810 r_193_1 G ]chr16:6068351]G . PASS SVTYPE=BND;MATEID=r_193_0 TR:VR 78:7 27:0 chr17 29503370 d_1035 T . PASS END=29503811;SVTYPE=DEL;SVLEN=-441 TR:VR 24:7 13:0 chr2 147841899 i_854 C . PASS END=147841899;SVTYPE=INS;SVINSLEN=132;SVINSSEQ=AAAAAGAAATCTTTGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATCTTAGAGTATAATAAAAAAAAATAATAATAATAATAATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA TR:VR 37:11 8:0 chr2 357186 d_1214 G . PASS END=357334;SVTYPE=DEL;SVLEN=-148;SVINSLEN=14;SVINSSEQ=TTAGGGTTAGGGTT TR:VR 41:17 14:0 chr22_KI270739v1_random 35266 d_1566 C . PASS END=35547;SVTYPE=DEL;SVLEN=-281;SVINSLEN=109;SVINSSEQ=ACTGTGAGTTGAATGCAAACATCACAAAGATGTTTCTCAGAATGCTTCTGTCTAGATTTTATATGAGGATATTCCATTTCCAACGAAATCGTCAAAGCTATCCAAATAT TR:VR 25:9 2:0 chr3 188371610 d_1670 T . Too_small_size END=188371651;SVTYPE=DEL;SVLEN=-41;SVINSLEN=1;SVINSSEQ=C TR:VR 98:9 16:0 chr4 1038880 d_1731 T . PASS END=1039690;SVTYPE=DEL;SVLEN=-810 TR:VR 26:7 14:0 chr7 142087407 r_420 G . PASS END=142090117;SVTYPE=DEL;SVLEN=-2710 TR:VR 31:3 8:0 chr8 126789022 d_2109 T . PASS END=126789085;SVTYPE=DEL;SVLEN=-63 TR:VR 21:14 14:0 chr8 58674032 d_2098 C . PASS END=58675148;SVTYPE=DEL;SVLEN=-1116 TR:VR 57:4 14:0