##fileformat=VCFv4.3
##fileDate=20230328
##source=nanomonsv-0.5.0
##reference=/projects/jfan_prj/jfan_prj/Nanopore_Testing/2021_nanopore_sv_testing/scratch/depth_testing/POG/COLO829/hg38_no_alt.fa
##contig=<ID=chr1,length=248956422>
##contig=<ID=chr2,length=242193529>
##contig=<ID=chr3,length=198295559>
##contig=<ID=chr4,length=190214555>
##contig=<ID=chr5,length=181538259>
##contig=<ID=chr6,length=170805979>
##contig=<ID=chr7,length=159345973>
##contig=<ID=chr8,length=145138636>
##contig=<ID=chr9,length=138394717>
##contig=<ID=chr10,length=133797422>
##contig=<ID=chr11,length=135086622>
##contig=<ID=chr12,length=133275309>
##contig=<ID=chr13,length=114364328>
##contig=<ID=chr14,length=107043718>
##contig=<ID=chr15,length=101991189>
##contig=<ID=chr16,length=90338345>
##contig=<ID=chr17,length=83257441>
##contig=<ID=chr18,length=80373285>
##contig=<ID=chr19,length=58617616>
##contig=<ID=chr20,length=64444167>
##contig=<ID=chr21,length=46709983>
##contig=<ID=chr22,length=50818468>
##contig=<ID=chrX,length=156040895>
##contig=<ID=chrY,length=57227415>
##contig=<ID=chrM,length=16569>
##contig=<ID=chr1_KI270706v1_random,length=175055>
##contig=<ID=chr1_KI270707v1_random,length=32032>
##contig=<ID=chr1_KI270708v1_random,length=127682>
##contig=<ID=chr1_KI270709v1_random,length=66860>
##contig=<ID=chr1_KI270710v1_random,length=40176>
##contig=<ID=chr1_KI270711v1_random,length=42210>
##contig=<ID=chr1_KI270712v1_random,length=176043>
##contig=<ID=chr1_KI270713v1_random,length=40745>
##contig=<ID=chr1_KI270714v1_random,length=41717>
##contig=<ID=chr2_KI270715v1_random,length=161471>
##contig=<ID=chr2_KI270716v1_random,length=153799>
##contig=<ID=chr3_GL000221v1_random,length=155397>
##contig=<ID=chr4_GL000008v2_random,length=209709>
##contig=<ID=chr5_GL000208v1_random,length=92689>
##contig=<ID=chr9_KI270717v1_random,length=40062>
##contig=<ID=chr9_KI270718v1_random,length=38054>
##contig=<ID=chr9_KI270719v1_random,length=176845>
##contig=<ID=chr9_KI270720v1_random,length=39050>
##contig=<ID=chr11_KI270721v1_random,length=100316>
##contig=<ID=chr14_GL000009v2_random,length=201709>
##contig=<ID=chr14_GL000225v1_random,length=211173>
##contig=<ID=chr14_KI270722v1_random,length=194050>
##contig=<ID=chr14_GL000194v1_random,length=191469>
##contig=<ID=chr14_KI270723v1_random,length=38115>
##contig=<ID=chr14_KI270724v1_random,length=39555>
##contig=<ID=chr14_KI270725v1_random,length=172810>
##contig=<ID=chr14_KI270726v1_random,length=43739>
##contig=<ID=chr15_KI270727v1_random,length=448248>
##contig=<ID=chr16_KI270728v1_random,length=1872759>
##contig=<ID=chr17_GL000205v2_random,length=185591>
##contig=<ID=chr17_KI270729v1_random,length=280839>
##contig=<ID=chr17_KI270730v1_random,length=112551>
##contig=<ID=chr22_KI270731v1_random,length=150754>
##contig=<ID=chr22_KI270732v1_random,length=41543>
##contig=<ID=chr22_KI270733v1_random,length=179772>
##contig=<ID=chr22_KI270734v1_random,length=165050>
##contig=<ID=chr22_KI270735v1_random,length=42811>
##contig=<ID=chr22_KI270736v1_random,length=181920>
##contig=<ID=chr22_KI270737v1_random,length=103838>
##contig=<ID=chr22_KI270738v1_random,length=99375>
##contig=<ID=chr22_KI270739v1_random,length=73985>
##contig=<ID=chrY_KI270740v1_random,length=37240>
##contig=<ID=chrUn_KI270302v1,length=2274>
##contig=<ID=chrUn_KI270304v1,length=2165>
##contig=<ID=chrUn_KI270303v1,length=1942>
##contig=<ID=chrUn_KI270305v1,length=1472>
##contig=<ID=chrUn_KI270322v1,length=21476>
##contig=<ID=chrUn_KI270320v1,length=4416>
##contig=<ID=chrUn_KI270310v1,length=1201>
##contig=<ID=chrUn_KI270316v1,length=1444>
##contig=<ID=chrUn_KI270315v1,length=2276>
##contig=<ID=chrUn_KI270312v1,length=998>
##contig=<ID=chrUn_KI270311v1,length=12399>
##contig=<ID=chrUn_KI270317v1,length=37690>
##contig=<ID=chrUn_KI270412v1,length=1179>
##contig=<ID=chrUn_KI270411v1,length=2646>
##contig=<ID=chrUn_KI270414v1,length=2489>
##contig=<ID=chrUn_KI270419v1,length=1029>
##contig=<ID=chrUn_KI270418v1,length=2145>
##contig=<ID=chrUn_KI270420v1,length=2321>
##contig=<ID=chrUn_KI270424v1,length=2140>
##contig=<ID=chrUn_KI270417v1,length=2043>
##contig=<ID=chrUn_KI270422v1,length=1445>
##contig=<ID=chrUn_KI270423v1,length=981>
##contig=<ID=chrUn_KI270425v1,length=1884>
##contig=<ID=chrUn_KI270429v1,length=1361>
##contig=<ID=chrUn_KI270442v1,length=392061>
##contig=<ID=chrUn_KI270466v1,length=1233>
##contig=<ID=chrUn_KI270465v1,length=1774>
##contig=<ID=chrUn_KI270467v1,length=3920>
##contig=<ID=chrUn_KI270435v1,length=92983>
##contig=<ID=chrUn_KI270438v1,length=112505>
##contig=<ID=chrUn_KI270468v1,length=4055>
##contig=<ID=chrUn_KI270510v1,length=2415>
##contig=<ID=chrUn_KI270509v1,length=2318>
##contig=<ID=chrUn_KI270518v1,length=2186>
##contig=<ID=chrUn_KI270508v1,length=1951>
##contig=<ID=chrUn_KI270516v1,length=1300>
##contig=<ID=chrUn_KI270512v1,length=22689>
##contig=<ID=chrUn_KI270519v1,length=138126>
##contig=<ID=chrUn_KI270522v1,length=5674>
##contig=<ID=chrUn_KI270511v1,length=8127>
##contig=<ID=chrUn_KI270515v1,length=6361>
##contig=<ID=chrUn_KI270507v1,length=5353>
##contig=<ID=chrUn_KI270517v1,length=3253>
##contig=<ID=chrUn_KI270529v1,length=1899>
##contig=<ID=chrUn_KI270528v1,length=2983>
##contig=<ID=chrUn_KI270530v1,length=2168>
##contig=<ID=chrUn_KI270539v1,length=993>
##contig=<ID=chrUn_KI270538v1,length=91309>
##contig=<ID=chrUn_KI270544v1,length=1202>
##contig=<ID=chrUn_KI270548v1,length=1599>
##contig=<ID=chrUn_KI270583v1,length=1400>
##contig=<ID=chrUn_KI270587v1,length=2969>
##contig=<ID=chrUn_KI270580v1,length=1553>
##contig=<ID=chrUn_KI270581v1,length=7046>
##contig=<ID=chrUn_KI270579v1,length=31033>
##contig=<ID=chrUn_KI270589v1,length=44474>
##contig=<ID=chrUn_KI270590v1,length=4685>
##contig=<ID=chrUn_KI270584v1,length=4513>
##contig=<ID=chrUn_KI270582v1,length=6504>
##contig=<ID=chrUn_KI270588v1,length=6158>
##contig=<ID=chrUn_KI270593v1,length=3041>
##contig=<ID=chrUn_KI270591v1,length=5796>
##contig=<ID=chrUn_KI270330v1,length=1652>
##contig=<ID=chrUn_KI270329v1,length=1040>
##contig=<ID=chrUn_KI270334v1,length=1368>
##contig=<ID=chrUn_KI270333v1,length=2699>
##contig=<ID=chrUn_KI270335v1,length=1048>
##contig=<ID=chrUn_KI270338v1,length=1428>
##contig=<ID=chrUn_KI270340v1,length=1428>
##contig=<ID=chrUn_KI270336v1,length=1026>
##contig=<ID=chrUn_KI270337v1,length=1121>
##contig=<ID=chrUn_KI270363v1,length=1803>
##contig=<ID=chrUn_KI270364v1,length=2855>
##contig=<ID=chrUn_KI270362v1,length=3530>
##contig=<ID=chrUn_KI270366v1,length=8320>
##contig=<ID=chrUn_KI270378v1,length=1048>
##contig=<ID=chrUn_KI270379v1,length=1045>
##contig=<ID=chrUn_KI270389v1,length=1298>
##contig=<ID=chrUn_KI270390v1,length=2387>
##contig=<ID=chrUn_KI270387v1,length=1537>
##contig=<ID=chrUn_KI270395v1,length=1143>
##contig=<ID=chrUn_KI270396v1,length=1880>
##contig=<ID=chrUn_KI270388v1,length=1216>
##contig=<ID=chrUn_KI270394v1,length=970>
##contig=<ID=chrUn_KI270386v1,length=1788>
##contig=<ID=chrUn_KI270391v1,length=1484>
##contig=<ID=chrUn_KI270383v1,length=1750>
##contig=<ID=chrUn_KI270393v1,length=1308>
##contig=<ID=chrUn_KI270384v1,length=1658>
##contig=<ID=chrUn_KI270392v1,length=971>
##contig=<ID=chrUn_KI270381v1,length=1930>
##contig=<ID=chrUn_KI270385v1,length=990>
##contig=<ID=chrUn_KI270382v1,length=4215>
##contig=<ID=chrUn_KI270376v1,length=1136>
##contig=<ID=chrUn_KI270374v1,length=2656>
##contig=<ID=chrUn_KI270372v1,length=1650>
##contig=<ID=chrUn_KI270373v1,length=1451>
##contig=<ID=chrUn_KI270375v1,length=2378>
##contig=<ID=chrUn_KI270371v1,length=2805>
##contig=<ID=chrUn_KI270448v1,length=7992>
##contig=<ID=chrUn_KI270521v1,length=7642>
##contig=<ID=chrUn_GL000195v1,length=182896>
##contig=<ID=chrUn_GL000219v1,length=179198>
##contig=<ID=chrUn_GL000220v1,length=161802>
##contig=<ID=chrUn_GL000224v1,length=179693>
##contig=<ID=chrUn_KI270741v1,length=157432>
##contig=<ID=chrUn_GL000226v1,length=15008>
##contig=<ID=chrUn_GL000213v1,length=164239>
##contig=<ID=chrUn_KI270743v1,length=210658>
##contig=<ID=chrUn_KI270744v1,length=168472>
##contig=<ID=chrUn_KI270745v1,length=41891>
##contig=<ID=chrUn_KI270746v1,length=66486>
##contig=<ID=chrUn_KI270747v1,length=198735>
##contig=<ID=chrUn_KI270748v1,length=93321>
##contig=<ID=chrUn_KI270749v1,length=158759>
##contig=<ID=chrUn_KI270750v1,length=148850>
##contig=<ID=chrUn_KI270751v1,length=150742>
##contig=<ID=chrUn_KI270752v1,length=27745>
##contig=<ID=chrUn_KI270753v1,length=62944>
##contig=<ID=chrUn_KI270754v1,length=40191>
##contig=<ID=chrUn_KI270755v1,length=36723>
##contig=<ID=chrUn_KI270756v1,length=79590>
##contig=<ID=chrUn_KI270757v1,length=71251>
##contig=<ID=chrUn_GL000214v1,length=137718>
##contig=<ID=chrUn_KI270742v1,length=186739>
##contig=<ID=chrUn_GL000216v2,length=176608>
##contig=<ID=chrUn_GL000218v1,length=161147>
##contig=<ID=chrEBV,length=171823>
##FILTER=<ID=Duplicate_with_close_SV,Description="When multiple SVs that share breakpoints in close proximity are detected, all but one SVs are filtered.">
##FILTER=<ID=Duplicate_with_insertion,Description="Breakend SVs that are inferred to be the same as any of detected insertions">
##FILTER=<ID=Duplicate_with_close_insertion,Description="When multiple insertions in close proximity are detected, all but one insertions are filtered.">
##FILTER=<ID=SV_with_decoy,Description="SVs involving decoy contigs">
##FILTER=<ID=Too_small_size,Description="Insertions whose size is below the threshould (currently 100bp)">
##FILTER=<ID=Too_low_VAF,Description="SVs whose variant allele frequencies are inferred to be low">
##INFO=<ID=SVTYPE,Number=1,Type=String,Description="Type of structural variant">
##INFO=<ID=SVLEN,Number=1,Type=Integer,Description="Difference in length between REF and ALT alleles">
##INFO=<ID=END,Number=1,Type=Integer,Description="End position of the variant described in this record">
##INFO=<ID=MATEID,Number=1,Type=String,Description="ID of mate breakend">
##INFO=<ID=SVINSLEN,Number=1,Type=Integer,Description="Length of insertion">
##INFO=<ID=SVINSSEQ,Number=1,Type=String,Description="Sequence of insertion">
##ALT=<ID=DEL,Description="Deletion">
##ALT=<ID=INS,Description="Insertion">
##ALT=<ID=DUP,Description="Duplication">
##FORMAT=<ID=TR,Number=1,Type=Integer,Description="The number of reads around the breakpoints">
##FORMAT=<ID=VR,Number=1,Type=Integer,Description="The number of variant supporting reads determined in the validation realignment step">
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	TUMOR	CONTROL
chr13	30402473	r_51_0	A	[chr13:43114046[G	.	PASS	SVTYPE=BND;MATEID=r_51_1	TR:VR	129:17	23:0
chr13	43114046	r_51_1	G	[chr13:30402473[G	.	PASS	SVTYPE=BND;MATEID=r_51_0	TR:VR	129:17	23:0
chr18	11173800	i_413	C	<INS>	.	Too_small_size	END=11173800;SVTYPE=INS;SVINSLEN=36;SVINSSEQ=AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	TR:VR	52:6	7:0
chr2	183042284	d_872	G	<DEL>	.	PASS	END=183042339;SVTYPE=DEL;SVLEN=-55	TR:VR	17:14	7:0
chr7	158998944	i_914	A	<INS>	.	PASS	END=158998944;SVTYPE=INS;SVINSLEN=366;SVINSSEQ=GTGGGGACCCCCTCCACCTCCCCCACCTTCATCCACGCTCCCCTCTCCTCAGTGTGGGACCCCCCTCCACACCCCCCACCTTCATCCACGCTCCCCTCTCCTCAGTGGGGACCCCCTCCACACCCCCACGTGCGTCCACGCTCCTCCCCTCTCCTCAGTGGGGACCCCCTCCACACTCCCCACCTTCATCATCCGCTCCCCTCTCCTCGGTGGGACCCCCCTCCACACTCCCCACCTTCATCCACGCTCCCTCTCCTCAGTGTGGACCCCCCTCCACACTCCCCACCTTCATCCACGCTCCCCTCTCCTCAGTGGGACCCCCCTCCACACCCCCCACGTGCGTCCACGCTCCCCTCTCCCTCAGTG	TR:VR	36:7	13:0
chr13	30402585	r_52_0	G	G]chr13:31483046]	.	PASS	SVTYPE=BND;MATEID=r_52_1	TR:VR	110:13	20:0
chr13	31483046	r_52_1	A	A]chr13:30402585]	.	PASS	SVTYPE=BND;MATEID=r_52_0	TR:VR	110:13	20:0
chr14	26486636	d_396	G	<DEL>	.	PASS	END=26487008;SVTYPE=DEL;SVLEN=-372	TR:VR	28:10	12:0
chr18	11337057	r_119	G	<DUP>	.	PASS	END=13297332;SVTYPE=DUP;SVLEN=1960275	TR:VR	68:11	27:0
chr2	1861668	i_484	C	<INS>	.	PASS	END=1861669;SVTYPE=INS;SVINSLEN=112;SVINSSEQ=CTAGATCTGCCATGCAGCCTGTGTAATCCTGGATCCTCCTGCAGCCTGTGTAATCCTGGATCTGCCTGCAGCCTGTGTAATCCTGGGATCCGCCTGCAGCCTGTGTAATCCT	TR:VR	44:5	13:0
chr14_GL000225v1_random	79468	d_470	G	<DEL>	.	Too_low_VAF	END=79592;SVTYPE=DEL;SVLEN=-124;SVINSLEN=31;SVINSSEQ=AAAGTGGACCGCCTGTCACCGGTGTGCAGGG	TR:VR	631:3	430:1
chr18	11350953	r_120_0	T	T]chr18:13365255]	.	PASS	SVTYPE=BND;MATEID=r_120_1	TR:VR	91:8	34:0
chr18	13365255	r_120_1	G	G]chr18:11350953]	.	PASS	SVTYPE=BND;MATEID=r_120_0	TR:VR	91:8	34:0
chr2	88157659	i_521	T	<INS>	.	PASS	END=88157659;SVTYPE=INS;SVINSLEN=326;SVINSSEQ=ATGAAATCTCCGGCCTGGCGCAGTGGCTCATGCCTGTAATCTCAGCACTTTGGGAGGCCGAGGCGGGCAGATTATGAGGTCAGGAGATCAAGCCCATCCTGGCTAATATGGTGAAACCCCATCTCTACTAAAAGTACAAAAAATTAGCTGGGCGTGGTGGCGGGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAAGTGGGAGAATAGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCAAGATCACGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCATCTCAAAAATAAATAAATAAATAAAAGAAAAAAAAGAA	TR:VR	33:3	19:0
chr21	7251888	d_919	T	<DEL>	.	Too_low_VAF	END=7252166;SVTYPE=DEL;SVLEN=-278;SVINSLEN=104;SVINSSEQ=CTGTAGTTTTTATGTGAAGATATTTCCTTTTCCACAACAGGCCTCAAATCGCTACAAATATCCACTTGCAGATTCTACAAACAGAGTCTTTCAAAACTGCTCAA	TR:VR	142:3	54:1
chrUn_KI270442v1	71318	d_1373	G	<INS>	.	PASS	END=71327;SVTYPE=INS;SVINSLEN=97;SVINSSEQ=ATCAAAAGGAATAGAAACGAATGGAATGGAATTGAATTGAACGGAATTGAATGTCATCAATTGGAAACAAATGGAATACGGTGAAGTGGAGAGGAGT	TR:VR	120:8	36:1
chrX	52403817	i_1067	C	<INS>	.	PASS	END=52403835;SVTYPE=INS;SVINSLEN=417;SVINSSEQ=ACTGGAGGAAAGACAGCCACCTTATAATGTTGGGAGCCAAAAGTCTGAGAGTAGTGACCAACTCAACATTCCACTGGAGGCTATATGATCAAACAGCAAACTGCACCTGCCACCAGAAGGTATGCTGAGGGAAGTCACTCCCTGGTGCCGTGCTCCTTGAAGTTATCTACTGGAACATCTGGAGCCTACTGTTCAAAGAATGCAGACATGGAGGCCTGCACTAAGTCAAGCAGCTGACTGACAACCACCCACTTCTCCCTATCTCCTTTACTCAATAAATACGAAGGGTTTAGAAGCTCAGGGCCCTTGTTCACTAAAAGCAAGGAGCCCCCTGACCCCTTCTTCCAAACATACTCTTTTGTCTTTGTCTTTATGCCCGTGTTCATCCTCCTTTGTTCAGTCCAGCAAGGTCTGCAG	TR:VR	46:7	15:0
chr13	30599157	r_54	T	<DUP>	.	PASS	END=36347045;SVTYPE=DUP;SVLEN=5747888	TR:VR	139:34	32:0
chr2	88157927	i_522	C	<INS>	.	PASS	END=88157935;SVTYPE=INS;SVINSLEN=354;SVINSSEQ=TTTTTTTAAAAAATTTATTATTATTATACTTTAAGTTTTAGGGTACATGTGCACAATGTGCAGGTTTGTTACATATGTATACATGTGCCATGTTGGTTTGCTGCACCCATTAACTCGTCATTTAGCTTTAGGTATATCTCCTAAGGCTATCCCTCCCCCCTCCCCCCACCCCACAACAGTCCCGGAAGTGTGATGTTCCCCTTCCTGTGTCCATGTGTTCTCATTGTTCAATTCCCACCTATGAGTGAGAACATGCGGTGTTCATGTCCTTTGTAGGGACATGGATGAGACTGGAAACCATCATTCTCAGCAAACTATCACAAGGACAAAAGCCTACTTTTTGATGGGATTGTT	TR:VR	32:3	19:0
chr3	183915038	d_1022	G	<DEL>	.	PASS	END=183915148;SVTYPE=DEL;SVLEN=-110	TR:VR	37:14	16:0
chr4	141754420	d_1072	T	<DEL>	.	PASS	END=141754505;SVTYPE=DEL;SVLEN=-85	TR:VR	21:12	23:0
chr4	49308559	r_170_0	C	C[chrUn_KI270743v1:154884[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_170_1	TR:VR	471:3	319:0
chrUn_KI270743v1	154884	r_170_1	C	]chr4:49308559]C	.	Too_low_VAF	SVTYPE=BND;MATEID=r_170_0	TR:VR	471:3	319:0
chr5	177155997	d_1157	G	<DEL>	.	PASS	END=177156164;SVTYPE=DEL;SVLEN=-167	TR:VR	23:10	13:0
chr5	83251	d_1096	C	<DEL>	.	Too_small_size;Too_low_VAF	END=83281;SVTYPE=DEL;SVLEN=-30	TR:VR	75:3	10:0
chr7	31318393	d_1203	T	<DEL>	.	Too_small_size	END=31318437;SVTYPE=DEL;SVLEN=-44	TR:VR	21:3	17:0
chrX	122474	d_1407	A	<DEL>	.	PASS	END=123744;SVTYPE=DEL;SVLEN=-1270;SVINSLEN=50;SVINSSEQ=CTGTATGCTCTCTATCTTCTCTCAATGAGACCTAGGCCCAATGCAGACTC	TR:VR	25:6	6:0
chrX	52405508	i_1068	A	<INS>	.	PASS	END=52405508;SVTYPE=INS;SVINSLEN=349;SVINSSEQ=CAAGGTATTAGGGCTGGGCACGGTGGCTCACCCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCAGGCAAATCATGAGGTCAGGAGATGGAGTCCATCCTGGCCAAAATGGTGAAATCCTGTCTCTACTAAAAATACAAAAATTAGCTGGGTGTGGTGGCACGTGCTTGTAATCCCAGCTACTTGGGAGGCAGAGGCAGGAGAATCTCTTGAACCTGGGAGGCGGAGGTTGCAGTGAGCCAAGATCGCACCACTGCACTCCAGCATGGCGACAGAGTGAGAGTCCATCTCGAACAAAACAAAACAAAACAAAAAAACAAAAACAAAACAACAACAACAACAAAAAACCC	TR:VR	42:9	16:0
chr18	13243604	d_704	T	<DEL>	.	PASS	END=13247988;SVTYPE=DEL;SVLEN=-4384;SVINSLEN=52;SVINSSEQ=CCATCATCCATCCATCCACTCATTCATCTGTCCATCCATCCATGCACCTACC	TR:VR	40:9	16:0
chr19	245723	d_722	A	<DEL>	.	Too_low_VAF	END=245889;SVTYPE=DEL;SVLEN=-166;SVINSLEN=7;SVINSSEQ=CCCTAAC	TR:VR	73:3	38:0
chr20	31067007	d_899	G	<DEL>	.	Too_low_VAF	END=31067331;SVTYPE=DEL;SVLEN=-324;SVINSLEN=72;SVINSSEQ=AATGGAAGAATGGAATTTAATGGAATGGAATGGAATGGAATGCAATGGAATCCACCCGATTAGAATGGAAAG	TR:VR	591:4	153:0
chr6	57949270	r_189_0	C	]chrUn_KI270757v1:30931]T	.	Too_low_VAF	SVTYPE=BND;MATEID=r_189_1	TR:VR	101:3	70:0
chrUn_KI270757v1	30931	r_189_1	T	T[chr6:57949270[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_189_0	TR:VR	101:3	70:0
chr13	32174340	r_55_0	C	[chr13:37573380[A	.	PASS	SVTYPE=BND;MATEID=r_55_1	TR:VR	136:27	35:0
chr13	37573380	r_55_1	A	[chr13:32174340[A	.	PASS	SVTYPE=BND;MATEID=r_55_0	TR:VR	136:27	35:0
chr3	186299747	i_722	T	<INS>	.	PASS	END=186299747;SVTYPE=INS;SVINSLEN=210;SVINSSEQ=CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	TR:VR	30:15	11:0
chr4	145365863	d_1073	T	<DEL>	.	PASS	END=145366039;SVTYPE=DEL;SVLEN=-176	TR:VR	31:14	16:0
chrUn_GL000216v2	80461	d_1305	A	<DEL>	.	Too_low_VAF	END=80741;SVTYPE=DEL;SVLEN=-280;SVINSLEN=20;SVINSSEQ=TTCAATTCCTTTTCACTCGA	TR:VR	103:3	53:1
chrX	52408360	i_1069	T	<INS>	.	PASS	END=52408423;SVTYPE=INS;SVINSLEN=148;SVINSSEQ=TCATCAAGCAAGTTGCCCACTCGTTTTCTCTTTCTTTCCTTTTTTTTTTTTTTTTTTTTTTGACAGAGTCTTGCTCTGTCGCCAGACTGTAGTGCAATAGTGCGATTTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATAC	TR:VR	35:4	20:0
chr13	32174972	r_56	T	<DUP>	.	PASS	END=35584496;SVTYPE=DUP;SVLEN=3409524	TR:VR	161:23	27:0
chr21	7932498	d_923	T	<DEL>	.	Too_low_VAF	END=7932554;SVTYPE=DEL;SVLEN=-56;SVINSLEN=27;SVINSSEQ=CCATTCCATTCCATTCCATTTGATGGC	TR:VR	142:5	71:0
chr3	186299838	i_723	T	<INS>	.	PASS	END=186299838;SVTYPE=INS;SVINSLEN=180;SVINSSEQ=TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	TR:VR	31:14	11:0
chr4	49637456	d_1054	G	<DEL>	.	Too_low_VAF	END=49637516;SVTYPE=DEL;SVLEN=-60	TR:VR	500:7	129:0
chr5	83642	d_1099	C	<INS>	.	PASS	END=83642;SVTYPE=INS;SVINSLEN=90;SVINSSEQ=TTGATGGGAGGCAGGGTGGTCGGGGAAGCCTCGATGGGAGGCCGGGTGGTGGGGGAAGCCTTGATGGGAGGCCGGGTGGTCGGGGAAGCC	TR:VR	74:9	11:0
chr19	564549	d_725	C	<DEL>	.	PASS	END=565064;SVTYPE=DEL;SVLEN=-515	TR:VR	49:3	11:0
chr9	137441058	d_1293	C	<INS>	.	PASS	END=137441034;SVTYPE=INS;SVINSLEN=225;SVINSSEQ=CCAGACCAGGACAGCCCCCCCAGACCAGGACACCCCCTCAGACAGAACAGTCCCCCAGACCAGGACAGCTCCCCCAGACCAGGACACCCCCTCAGACAGAACAGTCCCCCAGACCAGGACAGCTCCCCCAGACCAGGACACCCCCTCAGACAGAACAGTCCCCAGACCAGGACAGCCCCCCCAGACCAGGACAGCCCCCAGACCAGGACAGCCCCCAGACCAAGA	TR:VR	29:6	9:0
chrX	5670419	d_1435	A	<INS>	.	Too_small_size	END=5670405;SVTYPE=INS;SVINSLEN=16;SVINSSEQ=AATAAATAAACGTCAC	TR:VR	39:4	12:0
chrY	56841173	i_1098	G	<INS>	.	Too_low_VAF	END=56841173;SVTYPE=INS;SVINSLEN=414;SVINSSEQ=CTTTGACTTAAGAGCATCGCAAGGTGTTGGGAGAGCCTCAGCCGGAATTTCACAGACAGACAAGGACAAAGAGAGGCCAGCGGGCTCCCTTGCACATCAGCCGGGGTGCGCAATGAGCGCAGGTCTAGCCAGGAGGCTGGCAAAGAGAGCTAGAGGTCTGCGTTCTGCCGCCAGGCGCTCCAAGGTGGTAGCTGGGAGGCTGCAGGGGCACGGGCGGGCCGACGACGGTGGCTCAGAGGCGCAGAGGAGGTGAGCCGCCGGAGGCGTGTCAGGCCTGGACGCTGCGCGGGCCCAGTGTTTCATGGGACGGGGGTCTCCACCCTGCCCAGGGGAGGACGCATTTTCCGTGGATTGGGGTGGGGGGGTGTGGGGTGTTGGTCAGGCGGGGTTGGGGTGGTGGAAAGGCATGAGATC	TR:VR	118:3	103:0
chr13	36354264	r_57	A	<DEL>	.	PASS	END=36477484;SVTYPE=DEL;SVLEN=-123220	TR:VR	145:29	34:0
chr20	31223330	i_608	A	<INS>	.	PASS	END=31223345;SVTYPE=INS;SVINSLEN=380;SVINSSEQ=GTGGAGTGGAGTGGAAAGGAGTGGCATGGAGTGGAATGGAGTGGAGTGGAGTGGAGTGGAATGGAGTGGAGTGCAGTGGAAGGGATTGGAATGGAAAGGAATAGAGTGGAATGGAATGGAATGATATGGTGAAAAGAAATGTGTGCTGAGATTGTGCCACTGTGCTACAGCCTGTGTGACACAGGGAGATCCTGTCAAAAGAAAGGAGTGGAATGTATGGGATTGGCATGGAATGGAATGGATTGGAGTGGAGTGGAATGGAATTGGAGTGGAGTGGAGTGGAGCGCACTGGAATGGAATGGACTGGAGTGGAATGGTGAAATGAAATGAGCTGAGATTGTGCCAGTGCACACCAGCCTGGGTGACAGAGTGAGACCCCA	TR:VR	42:5	12:0
chrX	135560238	d_1452	C	<DEL>	.	PASS	END=135560407;SVTYPE=DEL;SVLEN=-169;SVINSLEN=1;SVINSSEQ=G	TR:VR	25:11	9:0
chr13	37573353	r_58_0	T	T]chr13:37573502]	.	PASS	SVTYPE=BND;MATEID=r_58_1	TR:VR	87:26	17:0
chr13	37573502	r_58_1	T	T]chr13:37573353]	.	PASS	SVTYPE=BND;MATEID=r_58_0	TR:VR	87:26	17:0
chr14_GL000225v1_random	179197	r_84_0	G	[chr22:10746331[A	.	Too_low_VAF	SVTYPE=BND;MATEID=r_84_1	TR:VR	172:3	59:0
chr22	10746331	r_84_1	A	[chr14_GL000225v1_random:179197[A	.	Too_low_VAF	SVTYPE=BND;MATEID=r_84_0	TR:VR	172:3	59:0
chr15	36901985	d_539	C	<DEL>	.	PASS	END=36902070;SVTYPE=DEL;SVLEN=-85	TR:VR	29:19	11:0
chr2	222152553	d_873	A	<DEL>	.	PASS	END=222152602;SVTYPE=DEL;SVLEN=-49	TR:VR	18:15	19:0
chr4	15223098	d_1035	A	<DEL>	.	PASS	END=15223227;SVTYPE=DEL;SVLEN=-129;SVINSLEN=1;SVINSSEQ=T	TR:VR	28:14	22:0
chr7	53175658	d_1206	A	<DEL>	.	PASS	END=53175754;SVTYPE=DEL;SVLEN=-96	TR:VR	27:7	12:0
chr13	42040701	r_59_0	G	G]chr13:44635914]	.	PASS	SVTYPE=BND;MATEID=r_59_1	TR:VR	134:18	26:0
chr13	44635914	r_59_1	T	T]chr13:42040701]	.	PASS	SVTYPE=BND;MATEID=r_59_0	TR:VR	134:18	26:0
chr19	6415473	r_131	G	<DEL>	.	PASS	END=6491058;SVTYPE=DEL;SVLEN=-75585	TR:VR	83:21	27:0
chrUn_KI270442v1	84075	d_1377	A	<DEL>	.	Too_low_VAF	END=84221;SVTYPE=DEL;SVLEN=-146	TR:VR	191:4	63:1
chr10	132772896	i_106	A	<INS>	.	PASS	END=132772897;SVTYPE=INS;SVINSLEN=108;SVINSSEQ=TGAAGAGTGGGACAGACACTCAGCACTGACACGGAGGCCCCGGCAGCCGCCCCATGAAGAGTGGGACGGACACTCAGCACTGACACAGAGGCCACGGCCGCCGCCGTG	TR:VR	19:5	9:0
chr13	42153411	r_60	A	<DEL>	.	PASS	END=50345069;SVTYPE=DEL;SVLEN=-8191658	TR:VR	59:15	21:0
chr16	88632085	d_648	G	<DEL>	.	PASS	END=88632195;SVTYPE=DEL;SVLEN=-110	TR:VR	16:3	10:0
chr13	44432800	r_61_0	G	]chrUn_KI270442v1:111150]GA	.	Too_low_VAF	SVTYPE=BND;MATEID=r_61_1;SVINSLEN=1;SVINSSEQ=G	TR:VR	176:5	69:0
chrUn_KI270442v1	111150	r_61_1	A	AC[chr13:44432800[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_61_0;SVINSLEN=1;SVINSSEQ=C	TR:VR	176:5	69:0
chr22	44810814	d_979	A	<DEL>	.	PASS	END=44810870;SVTYPE=DEL;SVLEN=-56	TR:VR	29:10	10:0
chrUn_KI270442v1	93309	d_1379	T	<DEL>	.	Too_low_VAF	END=93764;SVTYPE=DEL;SVLEN=-455;SVINSLEN=20;SVINSSEQ=TAAGGGGCCTCGAATGCAAT	TR:VR	157:7	53:1
chr14	51295415	d_401	T	<DEL>	.	PASS	END=51295671;SVTYPE=DEL;SVLEN=-256	TR:VR	17:5	21:0
chr18	33820393	i_416	C	<INS>	.	PASS	END=33820393;SVTYPE=INS;SVINSLEN=460;SVINSSEQ=CCGGCGCCGGGCCGGCGCCACCCGGAACCCGCGCCGGGCCGGCGCCCACCCCCGGAACTCCGCGCCGGGCCGGCGCCCACCTCGGGAAACCCGCGCCGGGCCGGCGCCCACCCGGAACCCGCGCCGGGCCGGCGCCCACCCGGGAACCCGCGCCGGGCCGGCGCCACCCGGAACTCCGCCGGGCCGGCGCCCACCCGGAACCCGCTGCTGGCCGGCGCCCACCCGGAACCCGCGCCGGGCCGGCGCCCACCCGGAACCGCGGCCGGCCGGCGCCTCACCCGGAACCCGCGCGCCGGGCCGGCGCCCACCCGGAACTCCGCGCCGGGCCGGCGCCTCCACCCGGAACCCGCCGCCGTGGCCGGCGCCCACCCGGGAACCCGCGCCGGGCCGGCGCCCACCCGGGAACCCGCCGGGCCGGCGCCCACCCGGAACCCGCCGGGCCGGCGCCCACCCGGAACTC	TR:VR	33:4	11:0
chrX	64685378	d_1445	A	<DEL>	.	PASS	END=64685466;SVTYPE=DEL;SVLEN=-88	TR:VR	25:15	14:0
chr21	7946164	i_628	T	<INS>	.	Too_low_VAF	END=7946166;SVTYPE=INS;SVINSLEN=115;SVINSSEQ=CCATTCCATTCCATTCCTTCCTTTATTTCGACTGCATCTCACTCTGTCTCCCAAAATGAAGTGCAGTTGCTCAATCTTAGCTCACATTTCATTTCCACCATTTCACTCCATTCCG	TR:VR	308:5	143:1
chr5	2146435	i_803	C	<INS>	.	PASS	END=2146435;SVTYPE=INS;SVINSLEN=1527;SVINSSEQ=CAACACCTCCTCGCCATCACGACCTAATCACTTCCAGATCCTCCACCTCGTCACCATCACGACCTAATCACTTTCAGATCCTCCACCTCCTCACCATCACGACCTAATCACTTCCCAGATCCTCCACCTCCTCACCATCACGACCTAATCACTTCCCAGATCCTCCCACCTCCTCACCTTCATGACCTAATCACTTCCGGATCCTCCACCTCCTCACCATCACGACCTAATCACTTCCCCGGATCCTCCCACCTACTGACCATCACGACCTAATCACTTCCCAGAGCCTCCACCTCCTCACCATCGACGACCTAATCACCTCCAGATCCTCCACCTCCTCACCACCCACGACCTAATCACTTCCCAGATGCTCCACCTCCTCACCATCACGACCTAATCACTTCCCGAGGATCCTCCACCTCCTCACCATCATGACCTAATCACTTCCGAGATCCTCCACCTCCACTCACCATCACGACCTAATCACTTCCCAGAGCCCTCCACCTCCTCACCATCACGACCTAATCAATTCCCAGATCCTCCACCTCCTCACCATCACGACCTAATCACTTCCCAGATCCTTTACCTCCTCACCATCACGACCTAATCACTTCCAGATCCTCCACCTCGTCACCATCACGACCCTAATCATTTCCCGGATCCTCCAACTCGTCACCATCAAGACCTAATCATTTCCCGAGATCCGCCACCTCCGAACCATCATGAACTAATCACTTCCAGATCCGCCACCTCCTCACCATCACGACCTAATCACTTCCCAGAGCCTGCACCTCCTCACCATCACGACCTAATCAAGTCCAAGGCCTCCACCTCCTCACCATCACGACCTAATGACTTCCAGATCCTCCACCTCCTCACCATCACGACCTAATCACTTCCAGATGGTCCACCTCCTCACCATCACGACCTAATCACTTCCCAGAGCCTCCACCTCCTCACCATCGTGACCTAATCACTTCCAGATCCTCCACCTCCTCACCGTCACGACCTAATCACTTCCAGATCCTCCACCTCCTCACCATCACGACCTAATCACTTCCCGGATCCTCCACCTCCTCACCATCACGACCTAATCACGTCCCAGATCCTCCACCTTCCTCACCATCATGACCTAATAACTTCCAGATCCTCCACCTCCTCACCATCGGAACCCTAATCACTTCCCAGAGGCCTCCACCTCCTCACCATCACGACCCTAATCACTTCCAGATCCTCCCCCTCCTCACCATCACGACCTAATCACTTCCAGATCCTCCACCTCCTCACCATCACGACCCTAATCACTTCCCCAGAACCTCCACCTCCTCACCATCACGACCTAATCCTTCCCAAATCCTCCACCTCCTCACCATCACGACCCAATCACTTCCCAGATCCTCCACCTCCTCACCATCATGACCCTAATCACTTCCCCAGATCCTCCATCTCCTCACCATCACGACCTAATCACTTCCAGATCTCTCACACCTCCTCACCATCACGACCTAATCCCTTCCCAGATCCTCC	TR:VR	58:4	17:0
chr8	43239799	d_1253	A	<DEL>	.	Too_low_VAF	END=43239900;SVTYPE=DEL;SVLEN=-101;SVINSLEN=21;SVINSSEQ=AGTACACATAATATATATTAT	TR:VR	183:5	130:0
chr14	58296800	d_402	A	<DEL>	.	PASS	END=58296955;SVTYPE=DEL;SVLEN=-155;SVINSLEN=4;SVINSSEQ=GTTG	TR:VR	29:12	13:0
chr4	49711930	r_171_0	A	ACTCACACTATATATTATATACTGTACATAAAATATAAAATTATCCATACTATATATTATATACTGTATATAAAATATCAAAATACCCAAAATATATATTTTATACTGTAAATAAAATATCAAAGTACCCAAACAATATATTATGTTATGTACATAAAATATCAAAGTACCCAAAATATGTATTATATACTGTACATGAAATATGAAGGTACATCAAGTATATATCAGTGCAGAGATATGTCACAATGCCCCCATAGGCAGATCAAGACAAATGTCCGTCACCTGGGTGATCGGTGCAGTAGAAATATGTGACAATGCCCACAA]chrY:56838110]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_171_1;SVINSLEN=323;SVINSSEQ=CTCACACTATATATTATATACTGTACATAAAATATAAAATTATCCATACTATATATTATATACTGTATATAAAATATCAAAATACCCAAAATATATATTTTATACTGTAAATAAAATATCAAAGTACCCAAACAATATATTATGTTATGTACATAAAATATCAAAGTACCCAAAATATGTATTATATACTGTACATGAAATATGAAGGTACATCAAGTATATATCAGTGCAGAGATATGTCACAATGCCCCCATAGGCAGATCAAGACAAATGTCCGTCACCTGGGTGATCGGTGCAGTAGAAATATGTGACAATGCCCACAA	TR:VR	762:3	571:1
chrY	56838110	r_171_1	A	ATTGTGGGCATTGTCACATATTTCTACTGCACCGATCACCCAGGTGACGGACATTTGTCTTGATCTGCCTATGGGGGCATTGTGACATATCTCTGCACTGATATATACTTGATGTACCTTCATATTTCATGTACAGTATATAATACATATTTTGGGTACTTTGATATTTTATGTACATAACATAATATATTGTTTGGGTACTTTGATATTTTATTTACAGTATAAAATATATATTTTGGGTATTTTGATATTTTATATACAGTATATAATATATAGTATGGATAATTTTATATTTTATGTACAGTATATAATATATAGTGTGAG]chr4:49711930]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_171_0;SVINSLEN=323;SVINSSEQ=TTGTGGGCATTGTCACATATTTCTACTGCACCGATCACCCAGGTGACGGACATTTGTCTTGATCTGCCTATGGGGGCATTGTGACATATCTCTGCACTGATATATACTTGATGTACCTTCATATTTCATGTACAGTATATAATACATATTTTGGGTACTTTGATATTTTATGTACATAACATAATATATTGTTTGGGTACTTTGATATTTTATTTACAGTATAAAATATATATTTTGGGTATTTTGATATTTTATATACAGTATATAATATATAGTATGGATAATTTTATATTTTATGTACAGTATATAATATATAGTGTGAG	TR:VR	762:3	571:1
chr18	50072340	d_711	A	<DEL>	.	PASS	END=50072441;SVTYPE=DEL;SVLEN=-101;SVINSLEN=1;SVINSSEQ=C	TR:VR	27:11	21:0
chrX	75393643	d_1446	A	<DEL>	.	PASS	END=75393709;SVTYPE=DEL;SVLEN=-66;SVINSLEN=11;SVINSSEQ=ACAAACACCCT	TR:VR	35:3	18:0
chr13	48427112	r_62_0	G	G[chr17:8963783[	.	PASS	SVTYPE=BND;MATEID=r_62_1	TR:VR	52:31	32:0
chr17	8963783	r_62_1	G	]chr13:48427112]G	.	PASS	SVTYPE=BND;MATEID=r_62_0	TR:VR	52:31	32:0
chr21	7957286	d_931	G	<DEL>	.	Too_low_VAF	END=7957341;SVTYPE=DEL;SVLEN=-55	TR:VR	391:3	176:0
chr9	20289735	r_202_0	C	[chr9:20291731[G	.	PASS	SVTYPE=BND;MATEID=r_202_1	TR:VR	29:12	11:0
chr9	20291731	r_202_1	G	[chr9:20289735[G	.	PASS	SVTYPE=BND;MATEID=r_202_0	TR:VR	29:12	11:0
chr9	20985206	d_1267	C	<DEL>	.	PASS	END=20985320;SVTYPE=DEL;SVLEN=-114	TR:VR	28:17	14:0
chr12	25385214	d_316	A	<DEL>	.	PASS	END=25385428;SVTYPE=DEL;SVLEN=-214	TR:VR	33:9	14:0
chr13	59303232	d_357	T	<DEL>	.	PASS	END=59303308;SVTYPE=DEL;SVLEN=-76	TR:VR	15:14	18:0
chr19	7548813	r_133_0	T	[chr19:18171073[A	.	PASS	SVTYPE=BND;MATEID=r_133_1	TR:VR	101:10	26:0
chr19	18171073	r_133_1	A	[chr19:7548813[A	.	PASS	SVTYPE=BND;MATEID=r_133_0	TR:VR	101:10	26:0
chr9	20985820	r_203_0	A	A]chr9:29772305]	.	PASS	SVTYPE=BND;MATEID=r_203_1	TR:VR	47:17	29:0
chr9	29772305	r_203_1	T	T]chr9:20985820]	.	PASS	SVTYPE=BND;MATEID=r_203_0	TR:VR	47:17	29:0
chr18	62580861	d_713	T	<DEL>	.	PASS	END=62581171;SVTYPE=DEL;SVLEN=-310;SVINSLEN=219;SVINSSEQ=GTCACAGTGCTGTGGAAGGCCAGGTGGACCCTCCCGAGATGGTGTCACAGTGCTGTGGAAGGCCAGGTGGACCCTCCCGAGATGGTGTCACAGCGCTGTGGAAGGCCAGGTGGAACCTCCGGAGATGGTGTCACAGTGCTGTGGAAGGCCAGGTGGACCCCTCCCCGAGATGGTGTCACAGTGCTGTGGAAGGCCAGGTGGACCCTCCCGAGATGGTGT	TR:VR	27:3	11:0
chr6	72108602	i_850	A	<INS>	.	PASS	END=72108602;SVTYPE=INS;SVINSLEN=71;SVINSSEQ=AGTACATGTATCTCATTTTTCCCAATCTATATTTGATTCTATTTTTCCTCTAACTTTGAAACTTTAAAACA	TR:VR	35:16	23:0
chr9	22802740	r_204_0	G	[chr9:33557835[T	.	PASS	SVTYPE=BND;MATEID=r_204_1	TR:VR	52:12	21:0
chr9	33557835	r_204_1	T	[chr9:22802740[T	.	PASS	SVTYPE=BND;MATEID=r_204_0	TR:VR	52:12	21:0
chr11	1671117	i_126	G	<INS>	.	PASS	END=1671117;SVTYPE=INS;SVINSLEN=368;SVINSSEQ=TGGGTAGTGTGGGCAGTGTGGGTAGTGTGGGTGGTGTGGGTAGTGTGGATAGTGTGGGCAGTGTGGGTAATGTGGGCAGTGTGGGTAGTGTGGGTAGTGTGGATAGAGGTGGGTGTAGTGTGGGTAGTGTGTGGATAGGTGTAGGTAGTGTGGGTAGTGTGGGCAGTGTGGGGCAGGCAGGCAGTGTGGGGTGTGGGTAGTGTGGGTAGTGTGGATAGTGTGGGTAGTGTGGATAGTGTGGGCAGTGTGGGTAATGTGGGCAGTGTGGGTAGTGTGGGTAGTGTGGATAGAGTGGGTGGTGTGGGTAGTGTGGATAGTGTAGGTAGTGTGGGTAGTGTGTGGGTGTGTGGGCAGTGCAGGCAGTGCAT	TR:VR	28:4	15:0
chr4	180956692	d_1079	T	<DEL>	.	PASS	END=180956754;SVTYPE=DEL;SVLEN=-62;SVINSLEN=8;SVINSSEQ=GGTTACTG	TR:VR	22:3	14:0
chr11	17343569	d_291	A	<DEL>	.	PASS	END=17343705;SVTYPE=DEL;SVLEN=-136	TR:VR	26:8	12:0
chr12	37258907	i_163	G	<INS>	.	PASS	END=37258907;SVTYPE=INS;SVINSLEN=340;SVINSSEQ=TTTCCAACGAAGGCCTCAAAGAGGTCCAAATATCCACTTGCAGACTTTACAAACAGAGTGTTTCCAAACTGCTCTATGAAAAGAAAGGTTAAACTCTGTGAGTTGAACGCACACATCACAAAGTAGTTTCTGAGAATGATTCTGTCTAGTTTTTATACGAAGATATTTCCTTTTCAAACCTTGGCATCCAATCACTTCAAATCTCCACCTGCAAATTCCACAAAGGAGAGTGTAAAATATCTGCTGTCTAAAGGAAAGTTCACCTCTGTGAGATGAATACACACAACACAAAGAAGTTCCTGAGAATTCTTCTGTCTAGCATTATATGAAGAAATCCCAT	TR:VR	32:9	14:0
chr18	7307539	r_107_0	A	[chr18:13302510[A	.	PASS	SVTYPE=BND;MATEID=r_107_1	TR:VR	52:9	27:0
chr18	13302510	r_107_1	A	[chr18:7307539[A	.	PASS	SVTYPE=BND;MATEID=r_107_0	TR:VR	52:9	27:0
chr2	30427694	r_151	G	<DEL>	.	PASS	END=30671514;SVTYPE=DEL;SVLEN=-243820	TR:VR	44:13	36:0
chr9	25931056	d_1268	A	<DEL>	.	PASS	END=25931214;SVTYPE=DEL;SVLEN=-158	TR:VR	16:7	14:0
chr11	19792681	i_130	T	<INS>	.	PASS	END=19792681;SVTYPE=INS;SVINSLEN=89;SVINSSEQ=ATTTGAAACTTCCGGCTTCATTAATAGGTACTCTTAATACTCTTATCTCAGCATGCCTTCTGGGTTTACTGAAGCATCATGCCAGAGCA	TR:VR	26:10	10:0
chr18	7308200	r_108_0	C	C]chr18:13366708]	.	PASS	SVTYPE=BND;MATEID=r_108_1	TR:VR	66:9	34:0
chr18	13366708	r_108_1	G	G]chr18:7308200]	.	PASS	SVTYPE=BND;MATEID=r_108_0	TR:VR	66:9	34:0
chr3	197394698	d_1026	A	<DEL>	.	PASS	END=197394889;SVTYPE=DEL;SVLEN=-191	TR:VR	21:6	20:0
chr5_GL000208v1_random	74976	d_1162	T	<INS>	.	Too_low_VAF	END=75132;SVTYPE=INS;SVINSLEN=156;SVINSSEQ=ATCTGTATCCAATGAAGACTTCAAAGTACTCCAATTAACCACTTGCAGATTCTACACAAAGAGTGTTTCAAAACTGCACTATCAAAAGGAAGGTTCAATTCTGTCAGTTGAATGCATACACTACAAGGAACTTTCTGAGAATGTTTCTGTCTAGTT	TR:VR	67:3	19:0
chr1	265598	r_0_0	T	[chr5:181466840[GTTTGGATTCTTGTCCAGAT	.	Too_low_VAF	SVTYPE=BND;MATEID=r_0_1;SVINSLEN=19;SVINSSEQ=GTTTGGATTCTTGTCCAGA	TR:VR	135:4	111:0
chr5	181466840	r_0_1	T	[chr1:265598[TCTGGACAAGAATCCAAACT	.	Too_low_VAF	SVTYPE=BND;MATEID=r_0_0;SVINSLEN=19;SVINSSEQ=TCTGGACAAGAATCCAAAC	TR:VR	135:4	111:0
chr18	7311012	r_109	C	<DUP>	.	PASS	END=7519107;SVTYPE=DUP;SVLEN=208095	TR:VR	50:11	17:0
chr8	46494839	d_1255	T	<DEL>	.	PASS	END=46495014;SVTYPE=DEL;SVLEN=-175;SVINSLEN=3;SVINSSEQ=CCA	TR:VR	34:3	15:0
chr11	24164915	r_25_0	T	[chrX:114749598[T	.	PASS	SVTYPE=BND;MATEID=r_25_1	TR:VR	46:10	44:0
chrX	114749598	r_25_1	T	[chr11:24164915[T	.	PASS	SVTYPE=BND;MATEID=r_25_0	TR:VR	46:10	44:0
chr13	84842148	r_63	G	<DEL>	.	PASS	END=84974527;SVTYPE=DEL;SVLEN=-132379;SVINSLEN=24;SVINSSEQ=AGATATTAGAGAGGGCTAATATTG	TR:VR	60:13	29:0
chr18	74853416	r_124	C	<DEL>	.	PASS	END=74857616;SVTYPE=DEL;SVLEN=-4200	TR:VR	30:16	13:0
chr19	28326686	r_144_0	T	T]chr19:36483872]	.	PASS	SVTYPE=BND;MATEID=r_144_1	TR:VR	60:6	25:0
chr19	36483872	r_144_1	A	A]chr19:28326686]	.	PASS	SVTYPE=BND;MATEID=r_144_0	TR:VR	60:6	25:0
chr11	24166098	r_26_0	T	T[chrX:114752633[	.	PASS	SVTYPE=BND;MATEID=r_26_1	TR:VR	48:9	41:0
chrX	114752633	r_26_1	T	]chr11:24166098]T	.	PASS	SVTYPE=BND;MATEID=r_26_0	TR:VR	48:9	41:0
chr13	84890245	r_64	T	<DUP>	.	PASS	END=84973678;SVTYPE=DUP;SVLEN=83433	TR:VR	94:13	33:0
chr14	95284542	d_408	C	<DEL>	.	PASS	END=95284686;SVTYPE=DEL;SVLEN=-144	TR:VR	30:11	17:0
chr8	46980583	d_1257	A	<DEL>	.	PASS	END=46980728;SVTYPE=DEL;SVLEN=-145	TR:VR	24:10	13:0
chr11	24242215	r_27_0	T	[chrX:114781496[C	.	PASS	SVTYPE=BND;MATEID=r_27_1	TR:VR	55:19	25:0
chrX	114781496	r_27_1	C	[chr11:24242215[C	.	PASS	SVTYPE=BND;MATEID=r_27_0	TR:VR	55:19	25:0
chr13	84974675	i_211	A	<INS>	.	PASS	END=84974717;SVTYPE=INS;SVINSLEN=226;SVINSSEQ=TGTGACTTAAGTAAATCTTTAGTAAACATGCTGGCTTTAAAATTATTGGTAAGATAAAAATATAAATGTCTTTGAGGCTGCTGACCCTTGGATAGGGTTTTTGTGGGGAGGTTTTTGTTGTTTTTCTTTCAATGGGAAGGTCTCTCTTCTGTAGGGCTGCTGCGGTTTTGTACACATAAATATCTTTGTTTTGATGCTGCTGTTGTTGCTTTCTGTTTGTTTTGAC	TR:VR	59:13	12:0
chr17	13797318	d_657	A	<DEL>	.	PASS	END=13797368;SVTYPE=DEL;SVLEN=-50;SVINSLEN=21;SVINSSEQ=CATATATTTCTATATAGAATA	TR:VR	64:4	7:0
chr19	29901781	r_145_0	T	TC]chr4:156152033]	.	PASS	SVTYPE=BND;MATEID=r_145_1;SVINSLEN=1;SVINSSEQ=C	TR:VR	53:4	37:1
chr4	156152033	r_145_1	A	AG]chr19:29901781]	.	PASS	SVTYPE=BND;MATEID=r_145_0;SVINSLEN=1;SVINSSEQ=G	TR:VR	53:4	37:1
chr18	7518369	r_110_0	G	G]chr18:8458201]	.	PASS	SVTYPE=BND;MATEID=r_110_1	TR:VR	51:8	27:0
chr18	8458201	r_110_1	T	T]chr18:7518369]	.	PASS	SVTYPE=BND;MATEID=r_110_0	TR:VR	51:8	27:0
chr19	310248	r_127_0	A	ACCCCGGCCTCCGGATTCTAAACCTGGGGG]chr19:540421]	.	PASS	SVTYPE=BND;MATEID=r_127_1;SVINSLEN=29;SVINSSEQ=CCCCGGCCTCCGGATTCTAAACCTGGGGG	TR:VR	65:11	29:0
chr19	540421	r_127_1	C	CCCCCCAGGTTTAGAATCCGGAGGCCGGGG]chr19:310248]	.	PASS	SVTYPE=BND;MATEID=r_127_0;SVINSLEN=29;SVINSSEQ=CCCCCAGGTTTAGAATCCGGAGGCCGGGG	TR:VR	65:11	29:0
chr21	8416424	d_937	T	<DEL>	.	Too_low_VAF	END=8416715;SVTYPE=DEL;SVLEN=-291;SVINSLEN=8;SVINSSEQ=CTCTCTGT	TR:VR	762:3	690:1
chr13	89549789	d_363	T	<DEL>	.	PASS	END=89549843;SVTYPE=DEL;SVLEN=-54	TR:VR	41:26	10:0
chr18	7518430	r_111_0	G	[chr18:13365296[G	.	PASS	SVTYPE=BND;MATEID=r_111_1	TR:VR	82:11	27:0
chr18	13365296	r_111_1	G	[chr18:7518430[G	.	PASS	SVTYPE=BND;MATEID=r_111_0	TR:VR	82:11	27:0
chr3	21966636	i_696	C	<INS>	.	PASS	END=21966641;SVTYPE=INS;SVINSLEN=105;SVINSSEQ=CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAAAAT	TR:VR	19:7	9:0
chr7	69459323	i_889	T	<INS>	.	PASS	END=69459324;SVTYPE=INS;SVINSLEN=140;SVINSSEQ=ATGTATATATGTGTATATATATGTATATATATGTGTATATATGTATATATGTATATGTATATATATGTATATATATGTATATATGTGTATATATGTGTATATATGTGTATATATATGTATATATGTATATATATGTATAT	TR:VR	21:10	8:0
chrX	143658416	d_1460	C	<DEL>	.	PASS	END=143658502;SVTYPE=DEL;SVLEN=-86	TR:VR	31:4	8:0
chr1	180977880	r_7	C	<DEL>	.	Too_low_VAF	END=181072793;SVTYPE=DEL;SVLEN=-94913	TR:VR	86:4	34:0
chr15	100225898	i_309	T	<INS>	.	PASS	END=100225898;SVTYPE=INS;SVINSLEN=144;SVINSSEQ=CTCTGTGCCATTCAGTCCTTACAGCAACAGTCACGGTCTCTGTGCCATTCAGTCCTTACCTCAGCAGTCATAGCCTCTGTGCCATTCAGTCCTTATAGCAGTCACGGTCTCTGTGCCATTCCAGTCCTTATAGCAGTCATAGCC	TR:VR	51:5	18:0
chr17	21642290	r_101_0	A	[chr7:57867627[A	.	PASS	SVTYPE=BND;MATEID=r_101_1	TR:VR	144:8	54:1
chr7	57867627	r_101_1	A	[chr17:21642290[A	.	PASS	SVTYPE=BND;MATEID=r_101_0	TR:VR	144:8	54:1
chr6	140371427	d_1177	C	<DEL>	.	PASS	END=140371523;SVTYPE=DEL;SVLEN=-96	TR:VR	31:9	17:0
chr1	184945367	d_181	G	<DEL>	.	PASS	END=184945523;SVTYPE=DEL;SVLEN=-156	TR:VR	36:19	10:0
chr13	114043968	i_230	G	<INS>	.	PASS	END=114043968;SVTYPE=INS;SVINSLEN=487;SVINSSEQ=CCCCCCCCCCGCCCCGCCTCACTCCCCGAGCTCCCCCGCCCCGCCCCTCACTCGCTGAGCTTCCCCCCCGCCTCACTCGCTGAGCCCCCCGCCCCGCCTCACTCGCCGAGCCCCCGCCCCGCCCTTCACGCGCGGAGCTCCCCCCGTCTCACCGTTTCCCCCTCACACTCCGCGGGAGCCCCCCCCCCCGCCTCACTCGCTCGGGGCTGAGCCCCCCGCCCCGCCCTCACCCGCTGAGCTCCCCCCCCCCGCCCTCTCTCGCTGAGCCCCGCCCTCGCCTCACTCGCTGAGCTCGCCCCGCCTCACTCGCTGAGCCCCCCGCCCCGCCTCACTCGCTGAGCTCCCCCCCGCCCCTCACTCGCTGAGCTCCCCGCCCCGCCCTCACTCGCTGAGTTCCCCTCCCCCCGCTCCGCCTCACTCGCTGAGCCCCCCGCCCCGCCCCCAGCTCGCTGAGCTCCCCCCGCCCCGCCCTCACTCTCGCTGAGCC	TR:VR	37:9	13:0
chr16	19369596	d_558	C	<DEL>	.	PASS	END=19369643;SVTYPE=DEL;SVLEN=-47	TR:VR	41:11	16:0
chr13	114043892	i_231	C	<INS>	.	PASS	END=114043892;SVTYPE=INS;SVINSLEN=664;SVINSSEQ=CCCCGCCCCGCCCCCTCGCTGCGCTGAGCCCCCCCCCGCCTCACCTCTGAGCCCCCCCCCGCCTCTCACTCGCTGAGCTCCCCCCCGCCCACTCGCTGAGCCCCGGCCCCCCGCCCCGCCCCCTCACTCGCTGAGCCCCCCGCCCCGCCCTCACTCGCTGAGCCCCCCCACCCGCCTCACTCGCTGGAGCCCCCCCCCCCCCGCCCCCACTCGCTGAGCTCCCCCCCGCCTCCACTCGCTGAGCCCCCCGCCCCGCCCTCACTCGCTGAGCCCCCCGCCCCGCCTCACTCTCGCTGAGCCCCCCGCCCCGCCCCGCACCCTCACTCGCTGAGCCCCCCCCCCGCCCCGCGCCTCACTCGCTGAGCCCCCCCCCCGCCCCGCCTCACTCGCTGAGCCCCCCGCCCCGCCTCACTCTCGCTGAGCCCCCCCCCCCCCCGCCTCACTCGCTGAGCTCCCCCCGCCTCACTCGCTGAGCCCCCGCCCCGCCTCACTCGCTGAGCCCCCGCCCCGCCCTCACTCGCTGAGCCCCCGCGCCGCCTCACTCGCTGAGCCCCCCCCCGCCTCACTCGCTGAGCCCCCCGCCCCCCCTCCTCGCTGGTTCTCCCGCTCGCTCGCTGAGCCCCGCCCCGCCTCACTCGCTGAGCCCCGCCTCACTGCGCTGAGC	TR:VR	37:7	13:0
chr6	148530971	d_1179	A	<DEL>	.	Too_small_size	END=148531011;SVTYPE=DEL;SVLEN=-40	TR:VR	22:9	14:0
chr7	8872763	d_1199	G	<DEL>	.	PASS	END=8872919;SVTYPE=DEL;SVLEN=-156	TR:VR	38:12	16:0
chr8	66232426	d_1258	C	<INS>	.	Too_small_size	END=66232435;SVTYPE=INS;SVINSLEN=9;SVINSSEQ=TGGCAACTG	TR:VR	37:10	16:0
chrX	149431775	d_1461	G	<DEL>	.	PASS	END=149431830;SVTYPE=DEL;SVLEN=-55	TR:VR	28:10	16:0
chr18	78563752	r_125_0	C	[chr5:1482462[CCCCACACCCCACATCCCCACACCCCACACCCCACACCCCACACCCCACACCCCACACCCCACAG	.	Too_low_VAF	SVTYPE=BND;MATEID=r_125_1;SVINSLEN=64;SVINSSEQ=CCCCACACCCCACATCCCCACACCCCACACCCCACACCCCACACCCCACACCCCACACCCCACA	TR:VR	613:4	119:0
chr5	1482462	r_125_1	G	[chr18:78563752[TGTGGGGTGTGGGGTGTGGGGTGTGGGGTGTGGGGTGTGGGGTGTGGGGATGTGGGGTGTGGGGG	.	Too_low_VAF	SVTYPE=BND;MATEID=r_125_0;SVINSLEN=64;SVINSSEQ=TGTGGGGTGTGGGGTGTGGGGTGTGGGGTGTGGGGTGTGGGGTGTGGGGATGTGGGGTGTGGGG	TR:VR	613:4	119:0
chr3	38966925	d_1005	C	<DEL>	.	PASS	END=38967209;SVTYPE=DEL;SVLEN=-284;SVINSLEN=5;SVINSSEQ=ATGGC	TR:VR	29:13	15:0
chr1	2677134	d_10	A	<DEL>	.	Too_low_VAF	END=2677299;SVTYPE=DEL;SVLEN=-165;SVINSLEN=5;SVINSSEQ=GGTGA	TR:VR	180:5	91:1
chr19	32700456	r_146	T	<DEL>	.	PASS	END=36409765;SVTYPE=DEL;SVLEN=-3709309;SVINSLEN=26;SVINSSEQ=GAGCTAGACACAGAGTGCTGATTGGT	TR:VR	57:16	31:0
chr16	34062745	r_94_0	C	[chrY:56843876[TTGGTTGATCAGTTCAGAGATGTGTCACAATGCCCATGTAAAGGCAGAGCCAGTAGCAAGAGCTACAACATCTGAGTGATCAATGCAGTGATATGTCACTATGCCCCAATAGGCAGAGCATAGTCAAGTGTTACATCACTTGGGTGATCAGTGCAGAGATAGGGTCACAATGCCCACATACACAGAGACTATAAAATATTCTCATCACG	.	Too_low_VAF	SVTYPE=BND;MATEID=r_94_1;SVINSLEN=208;SVINSSEQ=TTGGTTGATCAGTTCAGAGATGTGTCACAATGCCCATGTAAAGGCAGAGCCAGTAGCAAGAGCTACAACATCTGAGTGATCAATGCAGTGATATGTCACTATGCCCCAATAGGCAGAGCATAGTCAAGTGTTACATCACTTGGGTGATCAGTGCAGAGATAGGGTCACAATGCCCACATACACAGAGACTATAAAATATTCTCATCAC	TR:VR	342:3	193:1
chrY	56843876	r_94_1	G	[chr16:34062745[GTGATGAGAATATTTTATAGTCTCTGTGTATGTGGGCATTGTGACCCTATCTCTGCACTGATCACCCAAGTGATGTAACACTTGACTATGCTCTGCCTATTGGGGCATAGTGACATATCACTGCATTGATCACTCAGATGTTGTAGCTCTTGCTACTGGCTCTGCCTTTACATGGGCATTGTGACACATCTCTGAACTGATCAACCAAG	.	Too_low_VAF	SVTYPE=BND;MATEID=r_94_0;SVINSLEN=208;SVINSSEQ=GTGATGAGAATATTTTATAGTCTCTGTGTATGTGGGCATTGTGACCCTATCTCTGCACTGATCACCCAAGTGATGTAACACTTGACTATGCTCTGCCTATTGGGGCATAGTGACATATCACTGCATTGATCACTCAGATGTTGTAGCTCTTGCTACTGGCTCTGCCTTTACATGGGCATTGTGACACATCTCTGAACTGATCAACCAA	TR:VR	342:3	193:1
chr17	26797595	i_357	G	<INS>	.	PASS	END=26797595;SVTYPE=INS;SVINSLEN=101;SVINSSEQ=GAATGCAATCAGATGGAACGGAATGGAATAGAATGGAGTAGAATGGAATAGAATCGATTGGAATGGCACCGAATGGAATGGAATCTAATGGAATGGACTCG	TR:VR	76:7	35:0
chr22	10719637	d_948	C	<INS>	.	Too_low_VAF	END=10719632;SVTYPE=INS;SVINSLEN=222;SVINSSEQ=AAATCCATTCCATTCCATTCCACTCGAGTCCTTTCCATTCCATTCGAGTCCATTCCATTCCACTCCATTCCTGTTTTTCGATTCCTTTCCTCCATTCCTTTCCATTCCATTACAGTCCATTCCTTTCAATTCCATTCCATTCCATTCGTGTCCATTCCATTAGAGTCCATTCCATTTCATGCAATTCCATTCGTGTCCATTCCATTCCATTCCATTCCACTT	TR:VR	152:3	57:0
chr14	101608233	r_73_0	C	CCACCTCGGCCTCCACTTCCACCATCTCCTCCTCCCCCTTGTCCTCCACCTCCTCCTCCACCTCCTCCACCCTCCTCCACCTCCTCCACCTTGTCTTCCACCCCTCCTCCACCTCCTCCACCTGGTCCTCCACCTCCTCCTCCCTCTTCCAACTCCTCCAACTCTTCCC[chr15:29558694[	.	PASS	SVTYPE=BND;MATEID=r_73_1;SVINSLEN=168;SVINSSEQ=CACCTCGGCCTCCACTTCCACCATCTCCTCCTCCCCCTTGTCCTCCACCTCCTCCTCCACCTCCTCCACCCTCCTCCACCTCCTCCACCTTGTCTTCCACCCCTCCTCCACCTCCTCCACCTGGTCCTCCACCTCCTCCTCCCTCTTCCAACTCCTCCAACTCTTCCC	TR:VR	69:8	38:1
chr15	29558694	r_73_1	C	]chr14:101608233]GGGAAGAGTTGGAGGAGTTGGAAGAGGGAGGAGGAGGTGGAGGACCAGGTGGAGGAGGTGGAGGAGGGGTGGAAGACAAGGTGGAGGAGGTGGAGGAGGGTGGAGGAGGTGGAGGAGGAGGTGGAGGACAAGGGGGAGGAGGAGATGGTGGAAGTGGAGGCCGAGGTGC	.	PASS	SVTYPE=BND;MATEID=r_73_0;SVINSLEN=168;SVINSSEQ=GGGAAGAGTTGGAGGAGTTGGAAGAGGGAGGAGGAGGTGGAGGACCAGGTGGAGGAGGTGGAGGAGGGGTGGAAGACAAGGTGGAGGAGGTGGAGGAGGGTGGAGGAGGTGGAGGAGGAGGTGGAGGACAAGGGGGAGGAGGAGATGGTGGAAGTGGAGGCCGAGGTG	TR:VR	69:8	38:1
chr16	34064683	i_335	A	<INS>	.	Too_low_VAF	END=34064683;SVTYPE=INS;SVINSLEN=162;SVINSSEQ=ATGGAATTGAACAGAGTGGAGTGGAGTATAGTGGAATGGAATGCAATGGAATGGAATGGAGTGAAAGGAAATGTGAGCTGAGATTGTGCACTGCAATGCAACCTGGTTTACATGGAGTGAGAATCCTGTCCAAAGAAAGGAAAGGAATGGGATGGATTTTGA	TR:VR	176:8	80:1
chrX	1587797	i_1045	C	<INS>	.	Too_low_VAF	END=1587797;SVTYPE=INS;SVINSLEN=473;SVINSSEQ=TCCCTCCTCAGCTGCTGCGCTGGCCCCAGTGCATGGTAGGATCCCCACATGCTCTCTCCCTGCCCCGCATGCCTGCCAGGGTACTGGGTTTCCATCCCCCCCAGGGCAGACGGGCAGCTTGGCCGAGGAGCTGAGCCTCCAGCCTGGGCTCCTTCCTGCCTTGGCTTCCCTCGGTCTCTGACCTTGCTTCAGTAGCTCAGCCATCCCCTTCTGCTGTCCTGTGTCTCCCCAGGGTGCCTCTCGGGGACTAAGGGTGTAAGAGGGGCCCAGATGGGGGGGGGACCTAGAAGATGCTGCTCCTGTGCCCTCCACTCTCCCTCCCCTTCCCTCCCCTAGCCCCCTCCTCCCCTTCCCCCCGCTATCTCCTCCCTCCCCTAGTCCCTCCCCTAGTCCCTCACCCCTCCCCTAGCCCCTCCCTCCTCTCCCTCCTCCTCCCCTCCCCTAGCCCTTCCCTCCACTCATCCCTCCTGACC	TR:VR	258:5	91:0
chr20	64286704	i_623	T	<INS>	.	Too_low_VAF	END=64286704;SVTYPE=INS;SVINSLEN=312;SVINSSEQ=CAGAGACCTCTTTAGAACAAGTTCAGTGCTGGAAAATGGGAAATTCCAGGCCCAACTTTGCCTCATGGCAACCTTCCCTGGGCAGATTCCTGAGATTCTCCCAGCAGGCTAGACAGGCCGAGGTCTTTGCATTGCACTGGCCTCTCTAGTTGCAGCGTATGAAACACAAATGCCTCAACATTCCTAACTGCTGTCCCATGACAGCTAAAATATAACACCCACACTTGCTCATGTCAGACTCTAGGGTCCCAACTGCTGGGTCCGGTTAGGGTATGAAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTGGGGTT	TR:VR	119:3	82:0
chr8	7607928	r_198_0	G	[chr8:12611663[A	.	PASS	SVTYPE=BND;MATEID=r_198_1	TR:VR	35:3	12:0
chr8	12611663	r_198_1	A	[chr8:7607928[A	.	PASS	SVTYPE=BND;MATEID=r_198_0	TR:VR	35:3	12:0
chrX	1588377	i_1046	C	<INS>	.	Too_low_VAF	END=1588377;SVTYPE=INS;SVINSLEN=120;SVINSSEQ=TTCTCCCCTCCCTCTCCTCCCCTTCTCCTCTCCTCCCCCTCCCCTCTCCCCTCCCCTCCCCTCTCCCTTCTCCCTCCCCCTCCCCTCCTTTCCCCTCCCCCTCCCTCTTTCCTCCCTCCC	TR:VR	290:3	98:1
chr1	32066066	i_16	A	<INS>	.	PASS	END=32066093;SVTYPE=INS;SVINSLEN=44;SVINSSEQ=TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	TR:VR	30:8	15:0
chr2	47433737	d_795	C	<DEL>	.	Too_small_size	END=47433777;SVTYPE=DEL;SVLEN=-40	TR:VR	26:8	11:0
chr20	20744411	d_881	C	<DEL>	.	PASS	END=20744542;SVTYPE=DEL;SVLEN=-131	TR:VR	28:8	11:0
chr7	142042856	d_1218	T	<DEL>	.	PASS	END=142043071;SVTYPE=DEL;SVLEN=-215;SVINSLEN=69;SVINSSEQ=AAATATAATATCTATATTATATATACATATAATATCTAAATATAATATCTATATTATATATACATATAA	TR:VR	43:3	22:0
chr13	16249685	r_39	G	<DEL>	.	Too_low_VAF	END=44432799;SVTYPE=DEL;SVLEN=-28183114;SVINSLEN=162;SVINSSEQ=AGCGCAGAGGCCAATGGTGGAAAGGAAATATCTTCACCTAAAAATTAGACAGAAGCATTCTCAGAAACTTCTTTGTTGTGTTTGCATTCAACTCTCATATTTGAACATACCTTTTCTTAGAGCTGTTTTGAAACACTTTTTTACATGAATCTGCAAGTGTAG	TR:VR	290:8	105:0
chr4	189461318	i_776	G	<INS>	.	PASS	END=189461318;SVTYPE=INS;SVINSLEN=196;SVINSSEQ=GAAGGAAGAGAGGAAGGAAGGAGAAGAGAAGAGGAAGGAAGGTAGAGAAGGAAGCAAGGAAGGAAGAGAGAGGAAGGAAGGAGAAGAAGGAAGGAAGAGAGGGAAGACAGGAAGGAAGCAAGAGAGGGAGGGAAGAGGAAGGAAGGAGGGAGAGGGAGAAGGGAAGAAGGAAGACAGGAAGGGAAGCAAGGAAGAG	TR:VR	49:3	25:0
chr6	160218999	i_863	A	<INS>	.	PASS	END=160218999;SVTYPE=INS;SVINSLEN=211;SVINSSEQ=CAGCAACGTCAGAAAAAGCAGCAACAGCAATAGCAGAAGCAGCAACAGCAGCAGCAGCAAGAGCAGCAACAACGGTAGCTGTAACAATAACAAAAGTGAACAGCAACAGCAGCAAACAAAACAACACCCACAGCAAAAGCATCAGCAACAGCAACAAAGCAGGAACAACAGTAGCTGCAACAATAACAAAAGCAACAACAGCAGCAACAGC	TR:VR	30:8	18:0
chr8	121202444	d_1261	A	<DEL>	.	PASS	END=121202566;SVTYPE=DEL;SVLEN=-122	TR:VR	26:11	10:0
chr11	48789704	r_28_0	G	[chr11:71086511[GCTTCTGTCTAGTTTTTTTGTGAAGATGTTTCCTTTTAAACTATAGGCCGCAAAGCCCTCCAAATATCCCCTTGCAGATTCTACCAAAAGTTCCGTTTAGTTCTTATGTGAAGATATTTCCTTTTTCACCATAGGCCTTAAACCACTCACAAATATCCCTCTGCAGATACTACAAAAAGGCTGTTTCCAAACTGCTCCATCGAAAGAAAGCTTCAACTGTTTGAT	.	PASS	SVTYPE=BND;MATEID=r_28_1;SVINSLEN=224;SVINSSEQ=GCTTCTGTCTAGTTTTTTTGTGAAGATGTTTCCTTTTAAACTATAGGCCGCAAAGCCCTCCAAATATCCCCTTGCAGATTCTACCAAAAGTTCCGTTTAGTTCTTATGTGAAGATATTTCCTTTTTCACCATAGGCCTTAAACCACTCACAAATATCCCTCTGCAGATACTACAAAAAGGCTGTTTCCAAACTGCTCCATCGAAAGAAAGCTTCAACTGTTTGA	TR:VR	58:3	31:0
chr11	71086511	r_28_1	T	[chr11:48789704[TCAAACAGTTGAAGCTTTCTTTCGATGGAGCAGTTTGGAAACAGCCTTTTTGTAGTATCTGCAGAGGGATATTTGTGAGTGGTTTAAGGCCTATGGTGAAAAAGGAAATATCTTCACATAAGAACTAAACGGAACTTTTGGTAGAATCTGCAAGGGGATATTTGGAGGGCTTTGCGGCCTATAGTTTAAAAGGAAACATCTTCACAAAAAAACTAGACAGAAGCT	.	PASS	SVTYPE=BND;MATEID=r_28_0;SVINSLEN=224;SVINSSEQ=TCAAACAGTTGAAGCTTTCTTTCGATGGAGCAGTTTGGAAACAGCCTTTTTGTAGTATCTGCAGAGGGATATTTGTGAGTGGTTTAAGGCCTATGGTGAAAAAGGAAATATCTTCACATAAGAACTAAACGGAACTTTTGGTAGAATCTGCAAGGGGATATTTGGAGGGCTTTGCGGCCTATAGTTTAAAAGGAAACATCTTCACAAAAAAACTAGACAGAAGC	TR:VR	58:3	31:0
chr13	16253443	r_40	T	<DEL>	.	Too_low_VAF	END=44432799;SVTYPE=DEL;SVLEN=-28179356;SVINSLEN=167;SVINSSEQ=AGGAGAGCGCAGAGGCCAATGGTGGAAAGGAAATATCTTCACCTAAAAATTAGACAGAAGCATTCTCAGAAACTTCTTTGTTGTGTTTGCATTCAACTCTCATATTTGAACATACCTTTTCTTAGAGCTGTTTTGAAACACTTTTTTACATGAATCTGCAAGTGTAG	TR:VR	271:5	101:0
chr17	29575803	r_102_0	A	[chr3:10062[GGGGTTGGGGTTGGGGTTGGGGTTGGGGTTGGGGTTGGGGTTGGGGTTCGGGTTCGGGTTGGGGTTGGGGTTGGGGTTGGGGTTGGGGTTGGGGTTGGGGTTGGGGTTGGGGTTAGGGTTAGGGTTAGGGTTACGGTTATA	.	Too_low_VAF	SVTYPE=BND;MATEID=r_102_1;SVINSLEN=140;SVINSSEQ=GGGGTTGGGGTTGGGGTTGGGGTTGGGGTTGGGGTTGGGGTTGGGGTTCGGGTTCGGGTTGGGGTTGGGGTTGGGGTTGGGGTTGGGGTTGGGGTTGGGGTTGGGGTTGGGGTTAGGGTTAGGGTTAGGGTTACGGTTAT	TR:VR	209:6	200:0
chr3	10062	r_102_1	A	[chr17:29575803[ATAACCGTAACCCTAACCCTAACCCTAACCCCAACCCCAACCCCAACCCCAACCCCAACCCCAACCCCAACCCCAACCCCAACCCGAACCCGAACCCCAACCCCAACCCCAACCCCAACCCCAACCCCAACCCCAACCCCA	.	Too_low_VAF	SVTYPE=BND;MATEID=r_102_0;SVINSLEN=140;SVINSSEQ=ATAACCGTAACCCTAACCCTAACCCTAACCCCAACCCCAACCCCAACCCCAACCCCAACCCCAACCCCAACCCCAACCCCAACCCGAACCCGAACCCCAACCCCAACCCCAACCCCAACCCCAACCCCAACCCCAACCCC	TR:VR	209:6	200:0
chr18	8357867	r_112	T	<DUP>	.	PASS	END=11306789;SVTYPE=DUP;SVLEN=2948922	TR:VR	64:11	32:0
chr6	160910937	r_192	T	<DEL>	.	PASS	END=160923830;SVTYPE=DEL;SVLEN=-12893	TR:VR	43:17	13:0
chrUn_KI270745v1	22929	d_1400	G	<DEL>	.	PASS	END=23009;SVTYPE=DEL;SVLEN=-80;SVINSLEN=78;SVINSSEQ=GACAGAGTCAGCCTGAGCCCCTTGCCTCACACCGGCCCCTCCCACGCTGAGAGGTCAGTGTGAGCCCTTGCCTCACAC	TR:VR	20:5	4:0
chr18	8703231	r_113	A	<DUP>	.	PASS	END=8715894;SVTYPE=DUP;SVLEN=12663	TR:VR	37:13	24:0
chr19	351220	i_424	C	<INS>	.	PASS	END=351220;SVTYPE=INS;SVINSLEN=342;SVINSSEQ=ACACACACAAATATATATAAATACATACACACAAATATATAGTACATACATATATACACACACATATATATACACACACACATATATATACACACACACATATGTATACAAACACACAAATATAAACACACACATATGTATATACAAAAACACACAAATATATAAACACATACACACAAATATATATACACACATATATACACACACACAAATATATAAACACATACACACAAATATATATACACACACATATATACACACACATATATATACACACACACATGTATACAAACACACAAATATATAAACACATACACACAAATATATATACACACATATATA	TR:VR	37:3	19:0
chr2	495196	d_787	T	<DEL>	.	PASS	END=495369;SVTYPE=DEL;SVLEN=-173;SVINSLEN=113;SVINSSEQ=CCCACGCGGACACAGGAACTATTCCACCGTCCCACGCGGACACAGGAACTATTCCACCGTCCCACGCGGACACAGGAACTATTGCACCGTCCCACGCGGACACAGGAACTATT	TR:VR	32:3	13:0
chr1	216779119	i_40	A	<INS>	.	PASS	END=216779119;SVTYPE=INS;SVINSLEN=524;SVINSSEQ=ATATATATTTATATTTATAAATATAAATATATATTTATATTTATAAATATAAATATATATTTATATTTATAAATATAAATATATATTTATATTTATAAATATAAATATATATTTATATTTATAAATATAAATATATATTTATATTTATAAACATTATATTTATATTTATAAACATTATATTTATAAATATAAATATATATTTATATTTATAAACATAAAATATTTATATTTATTTATAAAAATATGTATTTATATTTAAATAACTATAAATATTATAAAATAAATATTTATAAATTTATTTATAAAAATAAATATTTATAAATATAAATATAAATATATATTTATAAATATAAATATAAATATATATTTATAAATATAAATATAAATATATATTTATAAATATAAATATAAATATATATTTATATATATAAATATAAATATATATTTATATATATAAATATAAATATATATTTATATATATAAATATAAATATATATTTATATATATAAATATAAATATATATT	TR:VR	46:4	19:0
chr11	48915874	i_134	A	<INS>	.	PASS	END=48915874;SVTYPE=INS;SVINSLEN=172;SVINSSEQ=AGACATTTCCGTTTCAACCGTAGGCCTCAAAGTGCTCCAAATATCCACTTGCAGGTTCTACAAAAAGAGTGTTTCAAAACTGCTCTATAAAAAGGAAGGTTCATCTCAGTGAGTTGAATGCACACATAACAAAGAAGACTTACTGAGAATGCTTCTGTTTAGTTTTTTTGTA	TR:VR	37:3	23:0
chr14	105612976	r_74	A	<DUP>	.	Too_low_VAF	END=105751153;SVTYPE=DUP;SVLEN=138177;SVINSLEN=7;SVINSSEQ=AAAAATG	TR:VR	64:3	30:0
chr18	8703985	r_114_0	C	C]chr18:8712589]	.	PASS	SVTYPE=BND;MATEID=r_114_1	TR:VR	33:12	20:0
chr18	8712589	r_114_1	G	G]chr18:8703985]	.	PASS	SVTYPE=BND;MATEID=r_114_0	TR:VR	33:12	20:0
chr10	49943875	d_268	T	<DEL>	.	PASS	END=49943991;SVTYPE=DEL;SVLEN=-116	TR:VR	33:18	17:0
chr18	8704841	r_115_0	A	[chr18:8712616[C	.	PASS	SVTYPE=BND;MATEID=r_115_1	TR:VR	32:13	20:0
chr18	8712616	r_115_1	C	[chr18:8704841[C	.	PASS	SVTYPE=BND;MATEID=r_115_0	TR:VR	32:13	20:0
chr19	366074	r_128	A	<DUP>	.	PASS	END=562356;SVTYPE=DUP;SVLEN=196282	TR:VR	70:17	27:0
chr17	42299515	d_661	A	<DEL>	.	PASS	END=42299604;SVTYPE=DEL;SVLEN=-89	TR:VR	23:7	15:0
chr18	8713350	r_116	C	<DEL>	.	PASS	END=11125519;SVTYPE=DEL;SVLEN=-2412169	TR:VR	50:13	26:0
chr2	54106417	d_796	T	<DEL>	.	PASS	END=54106623;SVTYPE=DEL;SVLEN=-206;SVINSLEN=2;SVINSSEQ=AG	TR:VR	36:14	23:0
chr22	10722555	d_956	T	<INS>	.	Too_low_VAF	END=10722556;SVTYPE=INS;SVINSLEN=291;SVINSSEQ=CAATTCCATTCTATTTCATTTGAGTCCATTCCATTGCTTTCCATTCAATTCCATTCGATGCCATTCCATTCCATTCCATTCCATTCTATTCCATTCCAGTCCATATCACTCTACTCCATTCCATTCCATTCCTTTCGAGTCTATTCAATTCAATTGCTTTCCATTGGAGTCCATTCCATTCTTTTCTGTTCCATTCTATTTCATTCGTGTTCATTCCATTGCATTCCGTTCCATTCGAGGCCATTTCATTCCATTACATTCCGTTCCATTCTGTTCTGTTCCGTTCCGTTC	TR:VR	159:6	75:0
chr3	88973182	r_166_0	G	]chrX:121267978]A	.	Too_low_VAF	SVTYPE=BND;MATEID=r_166_1	TR:VR	67:3	36:0
chrX	121267978	r_166_1	A	A[chr3:88973182[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_166_0	TR:VR	67:3	36:0
chr5	119376655	i_825	G	<INS>	.	PASS	END=119376655;SVTYPE=INS;SVINSLEN=122;SVINSSEQ=GAATAAACAATAAATTGTAACCAATCACTAGGATTTACTTTCAGGGAGTACGGAAACAAAAGTATGATAAGCAGTTAATCCAGCAGATACATATTAAAGATTAATTGGTCATTTATTGCAAG	TR:VR	34:17	12:0
chr9	93262996	r_206	T	<DEL>	.	PASS	END=133821388;SVTYPE=DEL;SVLEN=-40558392	TR:VR	57:16	30:0
chr1	219644789	i_41	C	<INS>	.	PASS	END=219644790;SVTYPE=INS;SVINSLEN=385;SVINSSEQ=TAGAGGGCTGATATGGTTTGGTTCTGTGTCCCCACCCAAATCTCATCTCAAACTGTAATTCCCATAATCCCCATGTGTCAAGGGAGACACATGGTGGGAGGCGATTGGATCCTGGGGGCAGTTTCCCCCATGCTGTTCTTGTGATAGTGAGTAAGTCCTCATGACAGCTGATGGTTTTATAAGTGTTTGACAGTTCCTCCTTCATACATGCTTCTCTCTCTCTTGCCTGCTGCCACATAAGACATGCCTGCCTCCTCTTCCACCGTGATTCTAAATTTCCTGAGGCCTCCCCAGCCATGCAGAACTGTGAGTCAATTAAACCTCTTTTCTTTATAAATTAGTCAGTCTCAGGTTTTTCTTATAGTAGTGTGAGAACAGACTAATA	TR:VR	35:3	14:0
chr12	48056881	d_322	A	<INS>	.	Too_small_size	END=48056858;SVTYPE=INS;SVINSLEN=71;SVINSSEQ=TAAATATATTATTTAATATATTACATATATAAATATATTATTTAATATATTACATATATAAATATATTATT	TR:VR	29:5	10:0
chr18	8714603	r_117	G	<DUP>	.	PASS	END=8716335;SVTYPE=DUP;SVLEN=1732	TR:VR	28:14	17:0
chrX	1637488	d_1427	G	<DEL>	.	PASS	END=1639796;SVTYPE=DEL;SVLEN=-2308;SVINSLEN=83;SVINSSEQ=TGATGGGGACAGTGTCCCAGTGTCCTGTGAGATCCATCCCTCCTGATGGTTCATGAGGATGTGGGCACAGCCTCTGTGTGTGA	TR:VR	32:7	13:0
chr1	219898417	d_189	C	<DEL>	.	Too_small_size	END=219898455;SVTYPE=DEL;SVLEN=-38	TR:VR	29:22	14:0
chr17	43227257	r_104	G	<DUP>	.	PASS	END=43262345;SVTYPE=DUP;SVLEN=35088	TR:VR	40:3	31:0
chr18	9309719	r_118_0	G	[chr18:11449937[A	.	PASS	SVTYPE=BND;MATEID=r_118_1	TR:VR	48:8	27:0
chr18	11449937	r_118_1	A	[chr18:9309719[A	.	PASS	SVTYPE=BND;MATEID=r_118_0	TR:VR	48:8	27:0
chr2	63278807	i_510	C	<INS>	.	PASS	END=63278807;SVTYPE=INS;SVINSLEN=60;SVINSSEQ=AGAGCAAGACTCCGTCTCAAACAAAAAAAAAAAAAAGAAAAGAAAAGAAATGAAATCGGA	TR:VR	28:5	8:0
chr12	53346940	d_323	C	<DEL>	.	PASS	END=53347210;SVTYPE=DEL;SVLEN=-270;SVINSLEN=157;SVINSSEQ=CAGGCTGGAGTGCAGTGGCATGATCTTGGCTCACTGCAAGATCCGCCTCCCGGGTTCACACCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCAGCAGGGCCCGGCTAATTTTTTTTGTATTTGTATTATTATTTTTATT	TR:VR	30:12	13:0
chr13	19786572	r_41_0	C	[chr13:23122679[A	.	PASS	SVTYPE=BND;MATEID=r_41_1	TR:VR	110:14	24:0
chr13	23122679	r_41_1	A	[chr13:19786572[A	.	PASS	SVTYPE=BND;MATEID=r_41_0	TR:VR	110:14	24:0
chr14_GL000225v1_random	112142	r_81_0	C	CTTGTGTGACAGATGGAGACCCTGTTGAAATAAAGGAGTGGAATGGAAGGGATTGGAATGGAATGGAATGGATAGGAGTGGAGTGAAGTGGAATTGAGTGGAGTGGAGTGGAGTGGAGTGCAGTGGAATGGAATGGAATGGAATGGT[chr16:34062721[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_81_1;SVINSLEN=146;SVINSSEQ=TTGTGTGACAGATGGAGACCCTGTTGAAATAAAGGAGTGGAATGGAAGGGATTGGAATGGAATGGAATGGATAGGAGTGGAGTGAAGTGGAATTGAGTGGAGTGGAGTGGAGTGGAGTGCAGTGGAATGGAATGGAATGGAATGGT	TR:VR	476:3	255:0
chr16	34062721	r_81_1	G	]chr14_GL000225v1_random:112142]ACCATTCCATTCCATTCCATTCCACTGCACTCCACTCCACTCCACTCCACTCAATTCCACTTCACTCCACTCCTATCCATTCCATTCCATTCCAATCCCTTCCATTCCACTCCTTTATTTCAACAGGGTCTCCATCTGTCACACAAG	.	Too_low_VAF	SVTYPE=BND;MATEID=r_81_0;SVINSLEN=146;SVINSSEQ=ACCATTCCATTCCATTCCATTCCACTGCACTCCACTCCACTCCACTCCACTCAATTCCACTTCACTCCACTCCTATCCATTCCATTCCATTCCAATCCCTTCCATTCCACTCCTTTATTTCAACAGGGTCTCCATCTGTCACACAA	TR:VR	476:3	255:0
chr17	47135848	d_664	G	<DEL>	.	PASS	END=47136168;SVTYPE=DEL;SVLEN=-320	TR:VR	25:3	13:0
chr19	434243	i_425	A	<INS>	.	PASS	END=434243;SVTYPE=INS;SVINSLEN=594;SVINSSEQ=GATCGATCGTGAGAGAGATCGTGAGTCTGTGAGTGAGTGAAATCATGAGATCGTGAGTCTTGTGAGTGAGGTCATGAGTCAGTGAGTGAGTGAAATCGTGAGTGAGATCATGAGTGGGATCCTGAGTCTGTGAGTGAGTGAAATCGTGAGTGAGACCGGGAGTGAGTCTGTGAGTGAGATCGTGAGTGAGTGAGTCTGTGAGTGAGATTGTGAGAGATCGTGAGTCAGATCGTGAGTCTGTGAGACTGAGATCGTGAGTCTGAGTGAGTGAAATCGTAAGTGAGATTCTGAGTGAGATAGTGAGGGAGTCTGAGATTGTAAGTGAAATCATAAGTGAGATCGTGAGTCTGTGAGATCGTGAGTGAGTGATATCGTGAGATCGTGAGTCTGTGAGATTGTGAGATCGTGAGTGAATGATATTGTGAGATCATGAGTGAGTGAGATAGTCTGTGAGATCGTGAGTGAGTGTGATTGTGAGTCTGTGAGATCGTGAGTGAGATCACGAGTGACTGAGATCGTGAGTGATTGAGATCGTGAGTCTGTGAGTGAGATCGTGAGACTGTGAGATTGTGAGTGAGATCGTGAATGAGACTG	TR:VR	28:9	12:0
chr5	13134	r_175_0	T	[chr5:14122[C	.	PASS	SVTYPE=BND;MATEID=r_175_1	TR:VR	44:22	39:0
chr5	14122	r_175_1	C	[chr5:13134[C	.	PASS	SVTYPE=BND;MATEID=r_175_0	TR:VR	44:22	39:0
chr9	110008411	d_1281	A	<DEL>	.	PASS	END=110008477;SVTYPE=DEL;SVLEN=-66	TR:VR	24:9	13:0
chr1	55704895	d_16	G	<DEL>	.	PASS	END=55705101;SVTYPE=DEL;SVLEN=-206	TR:VR	28:14	9:0
chr13	19955845	r_42	A	<DUP>	.	PASS	END=31458947;SVTYPE=DUP;SVLEN=11503102	TR:VR	115:20	20:0
chr17	48125384	d_665	T	<DEL>	.	Too_small_size	END=48125428;SVTYPE=DEL;SVLEN=-44	TR:VR	26:9	9:0
chr19	1049472	i_430	C	<INS>	.	PASS	END=1049472;SVTYPE=INS;SVINSLEN=484;SVINSSEQ=CGACCACTCCCTCCCTGTGAGCCCCCCGACCACTCCCTCCCCTGTGAGTTCCCCCACCACTCCCTCCCTGTGAGCCCCCCGACCACTCCCTCCCTGTGAGCCCCCCCGACCACTCCCTCCCTGTGAGTTCCCCCACCACTCCCTCCCTGTGAGCCCCCCCGACCACTCCCTCCCTGTGAGCCCCCCCCGACCACTCCCTCCCTGTGAGCCCCCCCACCACTCCCTCCCTGTGAGCCCCCCCGACCACTCCCTCCCTGTGAGCCCCCCGACCACTCCCTCCCTGTGAGCCCCCCACCACTCCCTCCCTGTGAGTTCCCCCCGACCACTCCCTCCCCTGTGAGGCCCCCACACCACTCCCCTCCCTGTGAGCCCCCCGGACCACTCCCTCCCCGTGAACCCCCCACCACTCCCCTCCCTGTGAGCCCCCCCCCCACCACTCCCTCCCTGTGAACCCCCCACCACTCCCTCCCTGTGAGCCCCCCAC	TR:VR	56:8	6:0
chrY	11324682	d_1483	A	<DEL>	.	Too_low_VAF	END=11325303;SVTYPE=DEL;SVLEN=-621;SVINSLEN=81;SVINSSEQ=TGTCGCCAATAGACAGAGCCTGGGTGACAAAACTTCCATCACCTGGGTGATCAGTGCAGAGATATGTCACAAAGCCTCCTG	TR:VR	550:8	265:1
chr11	64051007	r_29	C	<DEL>	.	PASS	END=64280376;SVTYPE=DEL;SVLEN=-229369	TR:VR	37:13	25:0
chr19	10758495	i_446	T	<INS>	.	PASS	END=10758495;SVTYPE=INS;SVINSLEN=329;SVINSSEQ=TCCCTCCCTCCTTCCCTCCCTCCTTCCTTCCCTCCCTTCCTTCCTTCCCTCCCTTCCCTCCCTCCTTCCTTCCCTCCCTTCCCTCCCTCCTTCCTTCCCTCCCTCCTTCCCTCCTTCCTTCCCTCCCTCCTTCCTTCCCTCCCTCCTTCCCTCCCTCCCTTCCTTCCCTCCTTCCCTCCCTCCCTCCCTCCCTCCTTCCCTCCCTCCCTCCTTCCCTCCCTCCTTCCTTCCTCCTTCCTTCCCTTCCCTCCTTCCTTCCCTCCCTCCTTCCCTCCCTCCCTCCTTCCTTCCCTCCCTCCTTCCTTCCCTCCCTCCTTCCTTCCCTCCCT	TR:VR	54:4	14:0
chr9	124201715	d_1283	A	<DEL>	.	PASS	END=124202068;SVTYPE=DEL;SVLEN=-353;SVINSLEN=1;SVINSSEQ=A	TR:VR	20:8	19:0
chrUn_KI270757v1	30931	i_1030	T	<INS>	.	Too_low_VAF	END=30981;SVTYPE=INS;SVINSLEN=461;SVINSSEQ=CTGTGTGTATTGAAGGCCAGGGTTCTCTAAACGGATAGAACTAATAGGATAGATGTTTATATGAAGGTGTGAGTTTATCAGGAGAATTGGCTCACATGATCACAAGGGGAAGTCTCACAATAGGCCGACTGCAAGCTGATGAGCCAAGAAGCCAGTCTGAGTCCCAAACTTCAAAGGTAGGGAGGCTCACAGTGCAGCCTTCAGTCTGCGGCTAGAGGCCTGGGAGTCCCTGGCAAACCAGCTCTGTAAGTCCAAGAGTCCAAAAAAAAAAAAAAAAAGCTGAAGAACTTGGAGTCTGATGTTCGAGGGCAGGAAGCATCCAATATCTTCACATATGAAGGCTGAACACCTGGCAAGTCTTCTGAGACACTTCTGCCTGCTTTATGTAGCTGCATGGCATCTGATTAGATGTTGAACACTCAGGATTGGAGGGTGGGTGCACTTTCCAGTCCACTGACTGC	TR:VR	84:3	57:0
chr10	6825146	r_10_0	A	AGGAAACAGACATTTGTAGAATCTGCAGAGGGATATTCCTGAGTGGTTTGAGTCCTGTTATGAAAAAGAAATATCTTCACATAAAAACTAGACAGAAGCATTCTGAGAAACTTCTTTGTGATGCGTGCATT[chr12:37735985[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_10_1;SVINSLEN=130;SVINSSEQ=GGAAACAGACATTTGTAGAATCTGCAGAGGGATATTCCTGAGTGGTTTGAGTCCTGTTATGAAAAAGAAATATCTTCACATAAAAACTAGACAGAAGCATTCTGAGAAACTTCTTTGTGATGCGTGCATT	TR:VR	67:3	34:0
chr12	37735985	r_10_1	C	]chr10:6825146]AATGCACGCATCACAAAGAAGTTTCTCAGAATGCTTCTGTCTAGTTTTTATGTGAAGATATTTCTTTTTCATAACAGGACTCAAACCACTCAGGAATATCCCTCTGCAGATTCTACAAATGTCTGTTTCCC	.	Too_low_VAF	SVTYPE=BND;MATEID=r_10_0;SVINSLEN=130;SVINSSEQ=AATGCACGCATCACAAAGAAGTTTCTCAGAATGCTTCTGTCTAGTTTTTATGTGAAGATATTTCTTTTTCATAACAGGACTCAAACCACTCAGGAATATCCCTCTGCAGATTCTACAAATGTCTGTTTCC	TR:VR	67:3	34:0
chr13	20525708	r_43	G	<DEL>	.	PASS	END=21544890;SVTYPE=DEL;SVLEN=-1019182	TR:VR	110:14	28:0
chr19	11232018	r_135	C	<DEL>	.	PASS	END=11380536;SVTYPE=DEL;SVLEN=-148518;SVINSLEN=1;SVINSSEQ=T	TR:VR	76:9	31:0
chr8	142256154	i_949	T	<INS>	.	Too_low_VAF	END=142256154;SVTYPE=INS;SVINSLEN=176;SVINSSEQ=CACCATCACTACCACCACCACCATCACCATCACCACCAGGATCACCATAATCACCACCATCACATCAACACCATCACCACCATCACCAACATTAATATCATCACCACCACCACCACCATGTACATCACCACCATCACCACTACCATCAATACCATGATCACATCAACATTAACATC	TR:VR	123:3	58:1
chr9	131414424	r_207	T	<DEL>	.	Too_low_VAF	END=134114764;SVTYPE=DEL;SVLEN=-2700340	TR:VR	82:4	33:0
chr13	21243053	r_44_0	T	T[chr2:153251457[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_44_1	TR:VR	141:3	77:0
chr2	153251457	r_44_1	T	]chr13:21243053]T	.	Too_low_VAF	SVTYPE=BND;MATEID=r_44_0	TR:VR	141:3	77:0
chr19	11387054	r_136_0	C	CTAACCC]chr19:11387511]	.	PASS	SVTYPE=BND;MATEID=r_136_1;SVINSLEN=6;SVINSSEQ=TAACCC	TR:VR	54:8	20:0
chr19	11387511	r_136_1	A	AGGGTTA]chr19:11387054]	.	PASS	SVTYPE=BND;MATEID=r_136_0;SVINSLEN=6;SVINSSEQ=GGGTTA	TR:VR	54:8	20:0
chr19	48531517	i_464	A	<INS>	.	PASS	END=48531517;SVTYPE=INS;SVINSLEN=164;SVINSSEQ=TACAAGGCCACACAGTTAATTTCTTTCTTTCTTTTTTTTTTTTTTTTGAGACAGTGTCTCGCTTTGTCACTCAGGCTGGAGTGTAGTGGTGTGATCTCGGCTCACTGCAACCTCCACCCCCTGGGTTCAAGCGATTCTCGTGCCTCAGCCTCCCGAGTAGCTGG	TR:VR	32:9	12:0
chr2	120391382	i_567	C	<INS>	.	PASS	END=120391382;SVTYPE=INS;SVINSLEN=75;SVINSSEQ=CATTGATGATGAACATGAGACATTGACATGAGCCATGAGCCATGAGACATGAGACATTGACATGAGACATGAGAC	TR:VR	31:4	11:0
chr5	5093079	r_180_0	A	A[chr9:93263076[	.	PASS	SVTYPE=BND;MATEID=r_180_1	TR:VR	66:8	20:0
chr9	93263076	r_180_1	A	]chr5:5093079]A	.	PASS	SVTYPE=BND;MATEID=r_180_0	TR:VR	66:8	20:0
chr10	80832066	d_272	C	<DEL>	.	Too_small_size	END=80832102;SVTYPE=DEL;SVLEN=-36	TR:VR	35:14	21:0
chr11	67175925	r_30	A	<DEL>	.	PASS	END=67216419;SVTYPE=DEL;SVLEN=-40494	TR:VR	40:10	27:0
chr19	11390834	r_137_0	C	[chr19:11405520[T	.	PASS	SVTYPE=BND;MATEID=r_137_1	TR:VR	62:9	28:0
chr19	11405520	r_137_1	T	[chr19:11390834[T	.	PASS	SVTYPE=BND;MATEID=r_137_0	TR:VR	62:9	28:0
chr19	48531517	i_465	A	<INS>	.	PASS	END=48531593;SVTYPE=INS;SVINSLEN=384;SVINSSEQ=TACAAGGCCACACAGTTAATTTCTTTCTTTCTTTTTTTTTTTTTTTTGAGACAGTGTCTCGCTTTGTCACTCAGGCTGGAGTGTAGTGGTGTGATCTCGGCTCACTGCAACCTCCACCCCCTGGGTTCAAGCGATTCTCGTGCCTCAGCCTCCCGAGTAGCTGGAATTACAGGCGCCTGCCACCACGCCTGGCTAATTTTTGTATTGTTAGTAGAGACGGGGTTTCACTATGTTGGCCAGGACGGTCTTGATCTCTTGACCTCGTGATTCGCCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGCATGTTCGGTCTCGTTGTACTATTCTTTCTGCTATGAGAATACGTTTTTAGGCTGGGCATGGTGGC	TR:VR	33:9	12:0
chr5	5093199	r_181_0	A	]chr9:133821325]A	.	PASS	SVTYPE=BND;MATEID=r_181_1	TR:VR	59:8	28:0
chr9	133821325	r_181_1	A	A[chr5:5093199[	.	PASS	SVTYPE=BND;MATEID=r_181_0	TR:VR	59:8	28:0
chr8	142403199	d_1264	G	<DEL>	.	PASS	END=142403328;SVTYPE=DEL;SVLEN=-129;SVINSLEN=1;SVINSSEQ=T	TR:VR	23:9	12:0
chr12	62433262	d_328	A	<DEL>	.	Too_small_size	END=62433308;SVTYPE=DEL;SVLEN=-46	TR:VR	26:5	16:0
chr14_GL000225v1_random	65948	i_262	T	<INS>	.	Too_low_VAF	END=65948;SVTYPE=INS;SVINSLEN=918;SVINSSEQ=CTCTGCACTGATCACCCAGGTGATAGTAACTCTTCTTTACCAGGCTCTGCGAAAAGGGGCATAGAGATGACATATCTCTGCACTGATCATCCAGGTGATGTTACTCTTGTCTACGCTCTGCCCATTGCAGGGGCATTGTGAAATATCTCTGCACTGATCACAAACCAGGTGATGTAACTGCTTCTCTAGGCTCTGCTTACTGGGGGCATTGTGACACTATTTCTGCACTGATCACCCAGCTCTGACGGACTCTTGTCTTGGATTTGCCTATAGGGGCATTATGACATATCTCTGCACTGATCACTACAGTGTGATGTAACTCTTATCTAAGCTGTGCCTAAAGGGGCATTGTGACATCAGTCTGCACTGATCACCCAGGTGATGTATGCCCTTCTGCATTTATGGGCTTTGATCTTACAGGGAATTGTGACATATCTGAATGCACTGATCACCCAAGTGATGTAACTCTTGTCTAGGCTCTGCCTACAGGGCTTTTTGACATATTTCTGCACTGATCACCGGGGTGATGTAACTCTTGTTTAGGCTCTGCCTACAGGAGCTTTGTGACATATCTCTGCACTGATCACCCAGGTGATGTAACCTTTTATAGGCTCTGCCTACAGGGGATTTTGTGACATATCTCTGCACTGATCACCCAGGTGATGTAACTTTAGTCTAGGATCTGCCTACAGGGGCATAGTGACATATCTCTGCACTGATCACCCAGGTGATGTAACTCTTATTCTAGGATCTGCCTACAGGGGGCATTGTGAAATATCTCTGCACTGATCATCCAGGTGATATAACTCTTCTCTATACTCTGCCTACAGGGTGAGTTGTGACATATCCCTGAACTGATCACAAAGGATGATATAAGTCTTGTCTGGAGCTCTGCCTAAAAGGGACATTGTGATGTAT	TR:VR	680:5	522:1
chr15	20102408	i_289	G	<INS>	.	PASS	END=20102408;SVTYPE=INS;SVINSLEN=224;SVINSSEQ=CTGGCTTGGGTGGCTTGGCTGGCTAGGGTGGCTGGCTGGCTTGGCTGGCTTGGCTGGCTGGCTGGCTTGGCTGCTGGCTGACTGGCATGGTTGGCAGGCTTCGCTGGCTTGACTGTTTGGGTGGCTTGGCCAGCTTGGCTGGCTGAGTGGCTTGGCTGGCTTTGCTGGCTGGGTGGCTTGGCTGGCTTGGCTGGCTGGGCGGCCCACTGGCTTGGCTGCCTGAC	TR:VR	98:7	35:1
chr19	11398044	r_138_0	T	[chr19:11406737[CAACCGCACGGGGTGCAACCC	.	PASS	SVTYPE=BND;MATEID=r_138_1;SVINSLEN=20;SVINSSEQ=CAACCGCACGGGGTGCAACC	TR:VR	50:5	21:0
chr19	11406737	r_138_1	C	[chr19:11398044[GGTTGCACCCCGTGCGGTTGC	.	PASS	SVTYPE=BND;MATEID=r_138_0;SVINSLEN=20;SVINSSEQ=GGTTGCACCCCGTGCGGTTG	TR:VR	50:5	21:0
chr2	77992143	d_797	C	<DEL>	.	PASS	END=77992213;SVTYPE=DEL;SVLEN=-70	TR:VR	21:11	13:0
chr3	90676103	d_1014	C	<DEL>	.	Too_low_VAF	END=90676275;SVTYPE=DEL;SVLEN=-172	TR:VR	143:4	56:0
chr11	72697638	d_299	C	<DEL>	.	PASS	END=72697694;SVTYPE=DEL;SVLEN=-56	TR:VR	20:12	14:0
chr19	11398282	r_139_0	C	CCTCTCA]chr19:11405824]	.	PASS	SVTYPE=BND;MATEID=r_139_1;SVINSLEN=6;SVINSSEQ=CTCTCA	TR:VR	48:5	21:0
chr19	11405824	r_139_1	T	TTGAGAG]chr19:11398282]	.	PASS	SVTYPE=BND;MATEID=r_139_0;SVINSLEN=6;SVINSSEQ=TGAGAG	TR:VR	48:5	21:0
chr22	10726219	d_966	T	<INS>	.	Too_low_VAF	END=10726198;SVTYPE=INS;SVINSLEN=87;SVINSSEQ=CCATTCCATTCCCTTCCATTCCATTCCATTCCATTCCATCCGTCTATCCCATTCCATTCCATTACAGTCCATTCGATTCCATTCCAT	TR:VR	187:3	76:1
chr9	134115802	i_971	C	<INS>	.	PASS	END=134115802;SVTYPE=INS;SVINSLEN=224;SVINSSEQ=GGACGGGGGGCCGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCCGACCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGCCGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACAGGGCGGCTGGCTG	TR:VR	43:6	18:0
chr1	238903243	d_194	A	<DEL>	.	Too_small_size	END=238903287;SVTYPE=DEL;SVLEN=-44	TR:VR	39:26	16:0
chr19	11614427	r_140	T	<DUP>	.	PASS	END=11620299;SVTYPE=DUP;SVLEN=5872	TR:VR	60:6	14:0
chr19	50204094	d_761	G	<DEL>	.	PASS	END=50204170;SVTYPE=DEL;SVLEN=-76	TR:VR	18:11	15:0
chr8	144659458	d_1266	T	<DEL>	.	Too_small_size	END=144659499;SVTYPE=DEL;SVLEN=-41	TR:VR	17:7	9:0
chr11	83017948	d_300	C	<DEL>	.	PASS	END=83018016;SVTYPE=DEL;SVLEN=-68	TR:VR	39:6	14:0
chr12	6594312	d_313	A	<DEL>	.	PASS	END=6594379;SVTYPE=DEL;SVLEN=-67	TR:VR	18:6	14:0
chr9	134117122	i_973	A	<INS>	.	PASS	END=134117122;SVTYPE=INS;SVINSLEN=228;SVINSSEQ=GGGCGGCTGGCCGGGCGGGGGGCCCGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCCGACCCCCCCACCTCCCTCCCGGACAGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACAGGGCGGCTGGCTGGGCGGGGGGCTGACCCCCCCAACCTCCCTCCCAGACGG	TR:VR	26:4	10:0
chr11	1017125	i_121	G	<INS>	.	PASS	END=1017125;SVTYPE=INS;SVINSLEN=166;SVINSSEQ=GTTCCTGTACTGGTGGGGTTGGGGGTGATGTTGGTGGTAGAAGTTGAGGTGGCTTCAGCATGGTGTGTGGAGGAAGTGTGTGAATGTAGGGATGTAGAGGTTTTGGCTGTGTTTAATGAGCTCAGGGCTTGGCTGGTCCCGCTGGTGGTCAGCGTCATTGTTGGCG	TR:VR	28:3	13:0
chr11	83018316	i_142	A	<INS>	.	PASS	END=83018316;SVTYPE=INS;SVINSLEN=63;SVINSSEQ=AGAAAAAGGAATCTCCAGTTTTTCATAGTGGTTGTACTAGCTTACATTCTCACCAGCACTGTA	TR:VR	41:6	14:0
chr13	21556140	r_45	A	<DUP>	.	PASS	END=26001760;SVTYPE=DUP;SVLEN=4445620	TR:VR	109:21	30:0
chr15	20293174	r_86_0	T	[chr7:148373053[T	.	Too_low_VAF	SVTYPE=BND;MATEID=r_86_1	TR:VR	121:3	63:0
chr7	148373053	r_86_1	T	[chr15:20293174[T	.	Too_low_VAF	SVTYPE=BND;MATEID=r_86_0	TR:VR	121:3	63:0
chr16	50136909	d_641	G	<DEL>	.	PASS	END=50136981;SVTYPE=DEL;SVLEN=-72	TR:VR	32:14	9:0
chr20	28943825	d_888	C	<DEL>	.	PASS	END=28944135;SVTYPE=DEL;SVLEN=-310;SVINSLEN=139;SVINSSEQ=AGAACCCTTCTGAGAAACATCTTTGTGATGTATGCATTCATCTCATAGTGTTGAACCTATCTTATGGTTGAACAGTTTTGAAACACTCTTTTTGTGGAATCTGCAAGGGATTAATTGGAGCGCTTTGAGGCCTACTGTG	TR:VR	48:5	14:0
chr5	144951450	r_185_0	T	TTTTTTTTTTTTTTTT[chr6:113605763[	.	PASS	SVTYPE=BND;MATEID=r_185_1;SVINSLEN=15;SVINSSEQ=TTTTTTTTTTTTTTT	TR:VR	66:5	34:0
chr6	113605763	r_185_1	T	]chr5:144951450]AAAAAAAAAAAAAAAT	.	PASS	SVTYPE=BND;MATEID=r_185_0;SVINSLEN=15;SVINSSEQ=AAAAAAAAAAAAAAA	TR:VR	66:5	34:0
chrUn_GL000216v2	163808	d_1316	A	<DEL>	.	Too_low_VAF	END=163887;SVTYPE=DEL;SVLEN=-79;SVINSLEN=9;SVINSSEQ=TTGGGGCAT	TR:VR	81:3	37:1
chrUn_KI270442v1	105862	i_1013	G	<INS>	.	PASS	END=105862;SVTYPE=INS;SVINSLEN=684;SVINSSEQ=TAGAATCTGCAAGTGGATATACGGAGTGGTTTGAGGCCTTCTTTGTAAACGGGAATATCTTCACATAAAAACTAGAGAGAAGCATTCTCAGAAACTTCTTTGTGATGTGTGCATTCAACTCACAGAGCTGAACCTTTCTTTTGATAGAGCTGTTTTGAAGCACTGTTTTTTTAGAATCTGCAAGTGAATATATTGAGTGCTTTGAGGCCTTCTTTGTAAACGGGAATATCTTCACATAAAAACTAGAGAGAAGCATTCTCAGAGCCTTCTTTGTGATGTGTGCATTCAACTCACAGAGTTGAACCTTTCTTTTGATAGAGGTGTTTGAAGCACTGTTTTTTTAGAATCTGCAAGTGGATATATTGAGTGCTTTGAGGCCTTCTTTGTAAACGGGAATATCTTCACATAAAAACTAGAGAGAAGCATTCTCAGAGCCTTCTTTGTGATGTGTGCATTCAACTCACAGAGCTGAACCTTTCTTTTGATAGAGCTGTTTTGAAGCACTGTTTTTTTAGAATCTGCAAGTGAATATATTGAGTGCTTTGAGGCCTTCTTTGTAAACGGGAATATCTTCACATAAAAACTAGAGAGAAGCATTCTCAGAGCCTTCTTTGTGATGTGTGCATTCAACTCACAGAGCTGAACCTTTCTTTTGATAGAGGTGTTTTGAAGCACTGTTTTTTT	TR:VR	102:13	35:1
chr13	23897799	r_46	C	<DEL>	.	PASS	END=31582599;SVTYPE=DEL;SVLEN=-7684800	TR:VR	80:33	27:0
chr19	17144862	d_742	C	<DEL>	.	PASS	END=17145035;SVTYPE=DEL;SVLEN=-173	TR:VR	46:30	10:0
chr2	87409765	d_800	A	<DEL>	.	PASS	END=87409829;SVTYPE=DEL;SVLEN=-64;SVINSLEN=46;SVINSSEQ=AGCTAGCCAAGCCAGCCAAGCCGGCCAGCCACAAGGCCAAGCCAGC	TR:VR	128:8	60:1
chrX	111075	d_1406	T	<INS>	.	PASS	END=111112;SVTYPE=INS;SVINSLEN=159;SVINSSEQ=GCTCTCTATTTGTCCTCAATGAGACCCAGGCCCAATGCAGACTCTAAAGGTGGCACAGTCTGCTCTCTATCGGTCCTCAATGAGACCGAGGCCCTATGCAGTCTCTAAAGGTTACACAGTGTGCTCTCTATCTCTCCTCAGTGAGACCTAGGCCCAATG	TR:VR	25:4	5:0
chr1	72120174	d_18	T	<DEL>	.	PASS	END=72120485;SVTYPE=DEL;SVLEN=-311	TR:VR	31:13	8:0
chr11	103452072	d_301	T	<DEL>	.	PASS	END=103452159;SVTYPE=DEL;SVLEN=-87	TR:VR	29:14	14:0
chr12	72081228	d_330	C	<DEL>	.	PASS	END=72081275;SVTYPE=DEL;SVLEN=-47	TR:VR	31:16	12:0
chr13	24111367	r_47_0	A	[chr13:41836472[A	.	PASS	SVTYPE=BND;MATEID=r_47_1	TR:VR	111:25	26:0
chr13	41836472	r_47_1	A	[chr13:24111367[A	.	PASS	SVTYPE=BND;MATEID=r_47_0	TR:VR	111:25	26:0
chr16	55973565	d_642	T	<DEL>	.	PASS	END=55973687;SVTYPE=DEL;SVLEN=-122	TR:VR	19:8	15:0
chr5	1627024	r_178	A	<DEL>	.	PASS	END=1628722;SVTYPE=DEL;SVLEN=-1698;SVINSLEN=4;SVINSSEQ=CAGG	TR:VR	32:6	20:0
chr13	24120863	r_48	A	<DEL>	.	PASS	END=36348846;SVTYPE=DEL;SVLEN=-12227983	TR:VR	133:25	31:0
chr15	20341143	i_294	A	<INS>	.	PASS	END=20341143;SVTYPE=INS;SVINSLEN=119;SVINSSEQ=ACAGCCAAGCCACCCAGCCAGCCACCTGCCACCCAAGACAGCCAGCCAGCCAAGCCAGCCAAGCCACCCAGCCGTCCAAGCTACAGCCAAGCCACCCAGCCAGCCAACGAGCTAAGCCA	TR:VR	139:7	59:0
chr4	100344611	d_1069	A	<DEL>	.	Too_small_size	END=100344655;SVTYPE=DEL;SVLEN=-44	TR:VR	17:9	13:0
chr5	57778829	d_1149	C	<DEL>	.	PASS	END=57778896;SVTYPE=DEL;SVLEN=-67	TR:VR	33:16	15:0
chrX	30795635	i_1061	T	<INS>	.	PASS	END=30795635;SVTYPE=INS;SVINSLEN=282;SVINSSEQ=TGCATTGCTTTGCCTTGTCTTGTGCCTTGCCCTGCTTTGCCTTGACTTGTTTGTTGATTTGCCTTGCCTTGATACTTGCCTTCCCTTAGCTTGTGCCTTGCCTTCGCTTGTGCCTTGGGTTGCCTTGCCTTGTGCCTTGGTGTCCCTTACCTTGTGCCTTACCTTGTCTTGCCTTGCCCCTTGCATTGCCTTGCCTTGTCCCTTGCCTTGCCTTGTAACTTGCCTTGCCTTGTGCCTTGCCATGGCTTGTCTTGCTTTGCCTTTTGCCTTGTCTTACACTGT	TR:VR	28:3	11:0
chr1	241208623	r_8	A	<DEL>	.	PASS	END=241304119;SVTYPE=DEL;SVLEN=-95496	TR:VR	75:12	26:0
chr13	24121519	r_49	A	<DUP>	.	PASS	END=43934135;SVTYPE=DUP;SVLEN=19812616	TR:VR	103:28	35:0
chr15	20341096	i_295	C	<INS>	.	Too_small_size;Too_low_VAF	END=20341096;SVTYPE=INS;SVINSLEN=41;SVINSSEQ=CAGCCAGCCAGCCAGCCAGCCAGCCAAGCCAGCCAAGCCAC	TR:VR	139:4	59:1
chr3	131496347	d_1019	T	<DEL>	.	PASS	END=131496425;SVTYPE=DEL;SVLEN=-78	TR:VR	27:8	16:0
chrUn_GL000216v2	169831	d_1318	T	<DEL>	.	Too_low_VAF	END=169967;SVTYPE=DEL;SVLEN=-136	TR:VR	132:3	58:1
chr19	20735419	r_141_0	A	]chr22_KI270733v1_random:155493]A	.	Too_low_VAF	SVTYPE=BND;MATEID=r_141_1	TR:VR	406:6	187:0
chr22_KI270733v1_random	155493	r_141_1	A	A[chr19:20735419[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_141_0	TR:VR	406:6	187:0
chr4	106145538	d_1070	C	<DEL>	.	PASS	END=106145609;SVTYPE=DEL;SVLEN=-71	TR:VR	23:12	11:0
chrX	3156691	d_1434	C	<DEL>	.	PASS	END=3156801;SVTYPE=DEL;SVLEN=-110	TR:VR	47:31	12:0
chrX	114746617	r_212_0	G	G]chrX:114753019]	.	PASS	SVTYPE=BND;MATEID=r_212_1	TR:VR	32:9	17:0
chrX	114753019	r_212_1	G	G]chrX:114746617]	.	PASS	SVTYPE=BND;MATEID=r_212_0	TR:VR	32:9	17:0
chr14	19383801	i_242	A	<INS>	.	PASS	END=19383803;SVTYPE=INS;SVINSLEN=180;SVINSSEQ=AGAGGCAGACCACAGGCCATCTTGAGGAGGACTTTATGTTCAAGTGCAGAAAGCAGCCAGGATTGCCACCCTGGGAACTCGGCCTGCTGTGGTCCGCAGTGCCATACGAGCTCTGAGGCATGGACTGGTGCCATGTGCTTTATAGAAAAATTAACTTAAGATCCATTAAAGAGCTAAATG	TR:VR	60:3	23:0
chr15	20342842	d_531	C	<DEL>	.	Too_small_size;Too_low_VAF	END=20342886;SVTYPE=DEL;SVLEN=-44	TR:VR	139:4	59:1
chr6	30027213	i_838	C	<INS>	.	PASS	END=30027213;SVTYPE=INS;SVINSLEN=335;SVINSSEQ=TTTTGTCCTTGTGATAGTTTGCTGAGAATGATAGTTTCCAGTCTCATCCATGTCCCTACAAAGGACATGAACACCGCATGTTCTCACTCATAGGTGGGAATTGAACAATGAGAACACATGGACACAGGAAGGGGAACATCACACTTCCGGGACTGTTGTGGGGTGGGGGGAGGGGGGAGGGATAGCCTTAGGAGATATACCTAAAGCTAAATGACGAGTTAATGGGTGCAGCAAACCAACATGGCACATGTATACATATGTAACAAACCTGCACATTGTGCACATGTACCCTAAAACTTAAAGTATAATAATAATAAATTTTTTTAAAAAAGGCT	TR:VR	17:3	15:0
chrX	36620709	d_1438	C	<DEL>	.	PASS	END=36620791;SVTYPE=DEL;SVLEN=-82	TR:VR	44:25	5:0
chr13	26283243	r_50_0	T	[chr13:35760363[T	.	PASS	SVTYPE=BND;MATEID=r_50_1	TR:VR	123:27	42:0
chr13	35760363	r_50_1	T	[chr13:26283243[T	.	PASS	SVTYPE=BND;MATEID=r_50_0	TR:VR	123:27	42:0
chr19	21750027	r_143	T	<DEL>	.	Too_low_VAF	END=22771714;SVTYPE=DEL;SVLEN=-1021687;SVINSLEN=4;SVINSSEQ=TTTT	TR:VR	89:3	30:0
chr5	66794699	d_1150	G	<DEL>	.	Too_small_size	END=66794742;SVTYPE=DEL;SVLEN=-43	TR:VR	21:9	14:0
chr17_GL000205v2_random	18083	d_672	G	<DEL>	.	PASS	END=18162;SVTYPE=DEL;SVLEN=-79;SVINSLEN=32;SVINSSEQ=AGGGACAAACTTTCAGACCACCAGCTGCAGTG	TR:VR	124:9	46:0
chr8	26406887	d_1249	A	<DEL>	.	PASS	END=26406956;SVTYPE=DEL;SVLEN=-69	TR:VR	25:9	15:0
chrX	42365732	d_1439	A	<DEL>	.	Too_small_size	END=42365770;SVTYPE=DEL;SVLEN=-38	TR:VR	47:25	19:0
chr14	25210551	r_66_0	T	TCACCCACTCCCCATAGAGCAGTTTTCATACACTGCTTTTGTAGAATCTGCTTGTGGATATTTGGAGCTCTTTGAGGAATTCGTTGTAAACGGGATATCCTCACATACAAACTAGACAGAAGCATTCTCGGAAACAGCTCTGTGA]chrUn_KI270538v1:63213]	.	PASS	SVTYPE=BND;MATEID=r_66_1;SVINSLEN=144;SVINSSEQ=CACCCACTCCCCATAGAGCAGTTTTCATACACTGCTTTTGTAGAATCTGCTTGTGGATATTTGGAGCTCTTTGAGGAATTCGTTGTAAACGGGATATCCTCACATACAAACTAGACAGAAGCATTCTCGGAAACAGCTCTGTGA	TR:VR	79:4	43:1
chrUn_KI270538v1	63213	r_66_1	A	ATCACAGAGCTGTTTCCGAGAATGCTTCTGTCTAGTTTGTATGTGAGGATATCCCGTTTACAACGAATTCCTCAAAGAGCTCCAAATATCCACAAGCAGATTCTACAAAAGCAGTGTATGAAAACTGCTCTATGGGGAGTGGGTG]chr14:25210551]	.	PASS	SVTYPE=BND;MATEID=r_66_0;SVINSLEN=144;SVINSSEQ=TCACAGAGCTGTTTCCGAGAATGCTTCTGTCTAGTTTGTATGTGAGGATATCCCGTTTACAACGAATTCCTCAAAGAGCTCCAAATATCCACAAGCAGATTCTACAAAAGCAGTGTATGAAAACTGCTCTATGGGGAGTGGGTG	TR:VR	79:4	43:1
chr15	21259637	r_87_0	A	[chr15:24620209[A	.	PASS	SVTYPE=BND;MATEID=r_87_1	TR:VR	92:9	46:0
chr15	24620209	r_87_1	A	[chr15:21259637[A	.	PASS	SVTYPE=BND;MATEID=r_87_0	TR:VR	92:9	46:0
chr19	54738664	i_470	T	<INS>	.	Too_small_size	END=54738664;SVTYPE=INS;SVINSLEN=41;SVINSSEQ=TATGGGCCTGGAGTGGAGATCTGGGGCCTGGAGGGGGATAT	TR:VR	30:4	14:0
chr5	7041499	d_1135	T	<DEL>	.	Too_small_size	END=7041538;SVTYPE=DEL;SVLEN=-39	TR:VR	42:12	18:0
chr6	32585456	i_840	T	<INS>	.	PASS	END=32585460;SVTYPE=INS;SVINSLEN=314;SVINSSEQ=TTTGTTTGTTTGTTTGTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCACTGCAAACTCCGCCTCCTGGGTTCACCCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCACCCACGACCAAGCCCGGCTAATTTTTCTGTATTTTTAGAAGAGACGGGGTTTCACCATGTTAGCCAGGATGGTCTCAATCTCCTGACCTCGTGATCCACCCTCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCTTGAGCCACCGCGCCCGGCCAGGATTATTTT	TR:VR	10:5	10:0
chr7	158360481	i_912	A	<INS>	.	PASS	END=158360482;SVTYPE=INS;SVINSLEN=1398;SVINSSEQ=CGCACAGACCCCACATCCACCCTCACCCAGGACGACGCACAGACCCCACATCCACCCTCACCCAGGACGACGCACAGACCCCACATCCACCCTCACCCAGGATGACGCACAGACTCCACATCCACCCTCACCCAGGACGACGCACAGACCCCACATCCACCCACACCCAGGATGACGCACAGACCCCACATCCACCCTCATCCTGGCAACCCACAGACCCCGCGTCCACCCTCACCCAGGACGACGCACAGACCCCACATCCACCCTCACCCAGGACGACGCACAGACCCCACATCCACCCACACCCAGGATGACGCACAGACCCCACATCCACCCTCATCCTGGCAACCCACAGACCCCGCGTCCACCCTCACCCAGGACGACGCACAGACCCCACATCCACCCTCACCCAGGATGACGCACAGACCCCACATCCACCCTCACCCAGGACGACGCACAGACCCCACATCCACCCACACCCAGGACGACGCACAGACCCCACATCCACCCTCACCCAGGACGACGCACAGACCCCACATCCACCCTCACCCAGGACGACGCACAGACCCCACATCCACCCTCACCCAGGATGACGCACAGACCCCACATCCACCCTCATCCTGGCAACCCACAGACCCCGCGTCCACCCTCACCCAGGACGACGCACAGACCCCACATCCACCCACACCCAGGACGACGCACAGACCCCACATCCACCCACACCCAGGACGACGCACAGACCCCACATCCACCCTCACCCAGGACGACGCACAGACCCCACATCCACCCTCACCCAGGACGACGCACAGACCCCACATCCACCCTCACCCAGGACGACGCACAGACCCCACATCCACCCACACCCAGGACGACGCACAGACCCCACATCCACCCTCACCCAGGACGACGCACAGACCCCACATCCACCCACACCCAGGACGACGCACAGACCCCACATCCACCCTCACCCAGGACGACGCACAGACCCCACATCCACCCTCACCCAGGATGACGCACAGACCCCACATCCACCCTCATCCTGGCAACCCACAGACCCCGCGTCCACCCTCACCCAGGACGACGCACAGACCCCACATCCACCCACACCCAGGACGACGCACAGACCCCACATCCACCCACACCCAGGACGACGCACAGACCCCACATCCACCCTCACCCAGGACGACGCACAGACCCCACATCCACCCTCACCCAGGACGACGCACAGACCCCACATCCACCCTCACCCAGGACGACGCACAGACCCCACATCCACCCACACCCAGGACGACGCACAGACCCCACATCCACCCTCACCCAGGACGACGCACAGACCCCACATCCACCCACACCCAGGACGACGCACAGACCCCACATCCACCCTCACCCAGGACGACG	TR:VR	29:3	15:0
chr1	246072472	i_49	T	<INS>	.	PASS	END=246072472;SVTYPE=INS;SVINSLEN=213;SVINSSEQ=GGGAGGGATTCGTGTGCTTTCCACTGTGCTCACTGTGGATGCATCCTGTTAGTTCTGGGGAGGGATTCGTGTGCTTTCCGCTGTGCTCACTGTCGCTGCATCCTGTTAGTTCTGGGGAGGATTCGTGTGCTTTCCACTGTGCTCACTGTGGATGCTTCCTGTTAGTTCTGGGGAGGGATTCGTGTGCTTTCCACTGTGCTCACTGTCTTTGCA	TR:VR	34:6	16:0
chr12	124015427	r_37_0	G	GAAAAAAAAAAAAAAAAA]chr2:3884061]	.	PASS	SVTYPE=BND;MATEID=r_37_1;SVINSLEN=17;SVINSSEQ=AAAAAAAAAAAAAAAAA	TR:VR	60:4	47:1
chr2	3884061	r_37_1	C	CTTTTTTTTTTTTTTTTT]chr12:124015427]	.	PASS	SVTYPE=BND;MATEID=r_37_0;SVINSLEN=17;SVINSSEQ=TTTTTTTTTTTTTTTTT	TR:VR	60:4	47:1
chr15	22230972	r_88	G	<DEL>	.	PASS	END=33168458;SVTYPE=DEL;SVLEN=-10937486	TR:VR	99:18	44:0
chr19	23466366	d_745	T	<DEL>	.	PASS	END=23466608;SVTYPE=DEL;SVLEN=-242;SVINSLEN=179;SVINSSEQ=CCTCCCCTCTTTACCTCTCCTCCTCCTACCATTCTCATCTCCTATCTCCTTCTCTTTTCTCTCCTCCTCCTCTCCTCCTCTTTTCTTCCTCCTCTCTTCCTCATTCCTTCCTCCTCCTCCCTCCCTCTCCTTTTACTCCTCTCCTCCTCCCTTCTACTCCTCTTCCTATTCTCCTCCTT	TR:VR	64:4	20:0
chr3	159763831	d_1021	C	<DEL>	.	PASS	END=159763929;SVTYPE=DEL;SVLEN=-98	TR:VR	28:15	14:0
chr7	158998872	i_913	A	<INS>	.	PASS	END=158998872;SVTYPE=INS;SVINSLEN=574;SVINSSEQ=TCCACGCTCCCTCTCCCTCAGTGGGGACCCCCTCCACACCCCCACGTGCGTCCACGCTCCCTCTCCTCAGTGTGGACCCCCCTCCACACTCCCCACGTTCATCCACGCTCCCTCTCCTCCAGTGGGACCCCCCTCCCTCCCCACCTTCCGTCCACGCTCCCCTCTCCCTCAGTGTGGACCCCCTCTTTTTCCACGTGCCCCCACCGTCCGTCTCTCTCTCGTCCCTCTCCTCACGTAGTGGGGCCCCCCTCCACCACCCCACACTCCATCCACGCTCCCCTCTCTCAGTGGGGACACACCTCCCTCCCCCACCTTCATCCACGCTCCTCCCCTCTCCTCAGTGGGGACCCCCTCCACACCCCCACGTGCGTCCACGCTCCCCTCTCCTCAGTGTGGACCCCCCTCCCCCTCCCCACCTTCATCCCCGCTCCCTCTCCTCGGTGGGGACCCCCCTCCACACTCCCCACCTTCATCCACGCTCCCCTCCTCTCGGGTGGGGACCCCCTCCACACTCCCCACCTGCGTCCACGCTCCCTCTCCTCAGTGGGACCCCCCTCCACACCCCCACCTGCGT	TR:VR	36:6	13:0