##fileformat=VCFv4.3 ##fileDate=20230214 ##source=nanomonsv-0.5.0 ##reference=/projects/jfan_prj/jfan_prj/Nanopore_Testing/2021_nanopore_sv_testing/scratch/depth_testing/POG/COLO829/hg38_no_alt.fa ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##FILTER= ##FILTER= ##FILTER= ##FILTER= ##FILTER= ##FILTER= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##ALT= ##ALT= ##ALT= ##FORMAT= ##FORMAT= #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT TUMOR CONTROL chr1 159843466 d_136 G . PASS END=159847920;SVTYPE=DEL;SVLEN=-4454 TR:VR 51:8 36:0 chr1 243480916 i_75 G . PASS END=243480916;SVTYPE=INS;SVINSLEN=669;SVINSSEQ=ATGGATGGATGGATGGTTGGGATGGATGGATGGATGGGTGGGGGATGGATGGATGGGTGGTATGGATGGATGGGTGGTATGGATGGATGGGTGTGATGGATGGATGGATGGGTGGGATGGATGGATGGATGGGTGGGATGGATGGATGGGATGGATGGATGGATGGATGGATGGATGGGATGGATGAATGGGGGATGGATGGATGGGGGATGGATGGATGGATGGGTGGGATGGATGGGTGGATAGATGGATGGATGGATGGATAAAGTGGATGGATGGATGGATGGGTGGGATGGATGGATGGATGGATGGATGGGTGGGATGGATGGATGGATGGATGGATGGATGAGTAGTATAGATGAATGAGTGGATAGATAGATAGATAGGTAGAGATAGATAGATAGATAGATGGGATAGATAGATAGGTAGATAGATAGATAGATGGAGTAATAGGTAAGAGATAGAAGTAGATAGAGATAGATAGATAGAGATAGATAGATAGATAGGTGAGATGAATGAATGAGTGAGATAGATAGATAGATAGATAGGTAGGATAGATAGATAGATAGATAGATAGGTAGGTAGATAGATAGGTAGATAGATGAATGAGTGAGATAGATGTGTGTGTGTGTGTGTGATAGGTAGGTAGAGATAGAGACAGAGATAGAA TR:VR 62:6 26:0 chr1 4821186 d_14 C . PASS END=4823286;SVTYPE=DEL;SVLEN=-2100 TR:VR 53:10 39:0 chr10 89643597 d_283 A . PASS END=89643810;SVTYPE=DEL;SVLEN=-213 TR:VR 20:11 34:0 chr13 42660914 d_441 T . PASS END=42661009;SVTYPE=DEL;SVLEN=-95;SVINSLEN=2;SVINSSEQ=TT TR:VR 21:3 35:0 chr15 36600199 r_129_0 T T[chr20:55567401[ . PASS SVTYPE=BND;MATEID=r_129_1 TR:VR 69:5 52:0 chr20 55567401 r_129_1 G ]chr15:36600199]G . PASS SVTYPE=BND;MATEID=r_129_0 TR:VR 69:5 52:0 chr16 29877174 d_719 C . Too_small_size END=29877213;SVTYPE=DEL;SVLEN=-39 TR:VR 34:14 24:0 chr18 22794962 i_560 G . PASS END=22794962;SVTYPE=INS;SVINSLEN=176;SVINSSEQ=AGATTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCAACAGAGCAAGACTCCGTCTCAAAAAAATAAAAATAGCTTTGAAGACAATTCTCATTGAAGGAAGACGTCTTATGGAAACACACAATTGCTCAAAGATAAATGTATAAAGATATTCACTGGAGCTTTGTTA TR:VR 24:13 26:0 chr2 130850750 r_209 G . PASS END=130855607;SVTYPE=DEL;SVLEN=-4857 TR:VR 47:15 34:0 chr5 158135794 d_1492 C . PASS END=158136094;SVTYPE=DEL;SVLEN=-300 TR:VR 46:21 32:0 chr8 112787455 r_358 A . Too_low_VAF END=112797102;SVTYPE=DEL;SVLEN=-9647 TR:VR 182:5 34:0 chr8 66024311 d_1705 A . PASS END=66024580;SVTYPE=DEL;SVLEN=-269 TR:VR 59:25 21:0 chrX 96586058 d_1917 T . PASS END=96588584;SVTYPE=DEL;SVLEN=-2526 TR:VR 44:9 35:0 chr1 102093386 d_32 T . PASS END=102108762;SVTYPE=DEL;SVLEN=-15376 TR:VR 57:18 47:0 chr1 4948960 r_2_0 T T]chr2:232508619] . PASS SVTYPE=BND;MATEID=r_2_1 TR:VR 71:14 52:0 chr2 232508619 r_2_1 C C]chr1:4948960] . PASS SVTYPE=BND;MATEID=r_2_0 TR:VR 71:14 52:0 chr12 40508238 i_210 G . PASS END=40508240;SVTYPE=INS;SVINSLEN=390;SVINSSEQ=TGTATTAGTTTGTTCTCACGTTGCTTTAAGGAACTACCTGAGACTAGGTAGTTTATAAAGCAAACGAGTTTAATGATGGACAGTTCTGCAGGCTGTGTGGAGGCATGGCTGGGAAGGCCTCAGGAAACTTACAATCATGGTGGAAGGTGAAGGGGAAGCAAGTACATCTTTACTTGGTGACAGTAGAGAAAGACAGAGTGAAAGAGGAAGTGCTACACACTTTTAAAGAAGCAGTTCTCGTGAGAACTCACTATCACAAGAACAGCAAAAGGGGAAATCCAGCCTCTATGATCCAATCAGCTCCAAACAGGTTCCTCCCCCAACACTGGGGATTATAATTCAACATGAGATATGAGTGGGGACTGAGAGTCAAACCTTATCACTCGGTTA TR:VR 39:3 26:0 chr13 52264023 r_83_0 C ]chr6:65586862]G . PASS SVTYPE=BND;MATEID=r_83_1 TR:VR 104:17 76:0 chr6 65586862 r_83_1 G G[chr13:52264023[ . PASS SVTYPE=BND;MATEID=r_83_0 TR:VR 104:17 76:0 chr14 27643771 r_96 T . PASS END=27649453;SVTYPE=DEL;SVLEN=-5682 TR:VR 35:19 44:0 chr15 36608727 r_130_0 A [chr15:37974905[C . PASS SVTYPE=BND;MATEID=r_130_1 TR:VR 65:12 51:0 chr15 37974905 r_130_1 C [chr15:36608727[C . PASS SVTYPE=BND;MATEID=r_130_0 TR:VR 65:12 51:0 chr16 30469885 d_720 T . PASS END=30470414;SVTYPE=DEL;SVLEN=-529 TR:VR 44:4 19:0 chr17 48038952 r_185 T . PASS END=48046812;SVTYPE=DEL;SVLEN=-7860 TR:VR 63:14 31:0 chr18 23903859 d_904 G . Too_small_size END=23903895;SVTYPE=DEL;SVLEN=-36 TR:VR 27:9 23:0 chr3 136116703 d_1331 A . PASS END=136116757;SVTYPE=DEL;SVLEN=-54;SVINSLEN=3;SVINSSEQ=CAA TR:VR 61:8 39:0 chr3 9901034 d_1283 C . PASS END=9901098;SVTYPE=DEL;SVLEN=-64 TR:VR 58:23 29:0 chr6 64180884 d_1554 G . PASS END=64198365;SVTYPE=DEL;SVLEN=-17481 TR:VR 83:9 44:0 chr8 112787455 d_1732 A . Too_low_VAF END=112797102;SVTYPE=DEL;SVLEN=-9647 TR:VR 182:5 34:0 chr8 66567698 i_1175 T . PASS END=66567698;SVTYPE=INS;SVINSLEN=618;SVINSSEQ=TATACCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAATTTAAAACTTTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTAT TR:VR 55:24 22:0 chrUn_KI270337v1 3 r_376_0 A [chrUn_KI270467v1:670[CCCAT . Too_low_VAF SVTYPE=BND;MATEID=r_376_1;SVINSLEN=4;SVINSSEQ=CCCA TR:VR 729:3 582:1 chrUn_KI270467v1 670 r_376_1 T [chrUn_KI270337v1:3[TGGGT . Too_low_VAF SVTYPE=BND;MATEID=r_376_0;SVINSLEN=4;SVINSSEQ=TGGG TR:VR 729:3 582:1 chr1 57188001 r_6 T . PASS END=57274306;SVTYPE=DUP;SVLEN=86305 TR:VR 50:8 56:0 chr13 52264589 r_84 G . PASS END=58893912;SVTYPE=DEL;SVLEN=-6629323 TR:VR 112:18 74:0 chr15 36612496 r_131_0 T T]chr15:54933805] . PASS SVTYPE=BND;MATEID=r_131_1 TR:VR 58:13 53:0 chr15 54933805 r_131_1 C C]chr15:36612496] . PASS SVTYPE=BND;MATEID=r_131_0 TR:VR 58:13 53:0 chr16 30635998 r_157 G . PASS END=30647816;SVTYPE=DEL;SVLEN=-11818 TR:VR 62:12 36:0 chr16 9912176 d_716 G . PASS END=9912263;SVTYPE=DEL;SVLEN=-87 TR:VR 53:10 33:0 chr18 27978167 d_905 G . PASS END=27980465;SVTYPE=DEL;SVLEN=-2298 TR:VR 35:8 31:0 chr2 134214527 r_210 T . PASS END=134239625;SVTYPE=DEL;SVLEN=-25098 TR:VR 59:16 47:0 chr2 4088568 d_963 T . Too_small_size END=4088612;SVTYPE=DEL;SVLEN=-44 TR:VR 27:6 23:0 chr2 9400180 i_630 C . PASS END=9400189;SVTYPE=INS;SVINSLEN=58;SVINSSEQ=GCTCGCCCTCCCCCCTCCCCTGCCCTGCCCCTCCTTCCCTCCTGCCCCTCCCCTCCTG TR:VR 35:4 25:0 chr20 30819553 d_1127 G . Too_low_VAF END=30824453;SVTYPE=DEL;SVLEN=-4900 TR:VR 120:3 84:0 chr5 158799453 i_1012 A . PASS END=158799453;SVTYPE=INS;SVINSLEN=50;SVINSSEQ=TTAATAAATAAATTAAATAAAGTAATTAAATAAATAAATTAATTAAATTA TR:VR 36:7 15:0 chr6 64672432 r_312 A . PASS END=64675945;SVTYPE=DEL;SVLEN=-3513 TR:VR 51:19 27:0 chr1 102670227 d_33 C . PASS END=102670370;SVTYPE=DEL;SVLEN=-143 TR:VR 30:14 29:0 chr1 165140856 d_139 G . PASS END=165140913;SVTYPE=DEL;SVLEN=-57 TR:VR 40:8 27:0 chr1 58980367 d_20 G . PASS END=58980558;SVTYPE=DEL;SVLEN=-191 TR:VR 19:10 26:0 chr13 111656468 i_285 C . PASS END=111656469;SVTYPE=INS;SVINSLEN=546;SVINSSEQ=GTGGCCGCCGCGGCCACCCAGTAGAACCCGCAGCCTCTGCCCCGTGCCCTTGAAGGGCTCCAGGAAATCTCACCATCACCACTGGCAGCCACTGCGGTGGCCGCTTGGAGTAGAACCTCTGCAGCTTCACCCTGTGCCCAGGAAGGGGCTCCAGAAACGTCACCATCACCACTGGCAGCCACCGCAGCCACCCAGAGTAGAACCTGCAGCCTTACCCCGTGCCCACGAAGGGGCGCTCCAGAAACGTCACCATCACCACTGGCAGCCACCGTGGCCGCCCAGGGTAGAACCTGCAGCCTCACCCCGTGCCCACGAAGGGTGCTCCAGAGACTGCACCATCACCACTGGCAGCCACCGTGGCCGCCCAGGGAGTAGAACCTGCAGCCTCACCCCGTGCCCAGGAAGGGGGCTCCAGAAACGTCACCATCACCACTGGCAGCCACCGCGGCCACCCAGGAGTAGAACCTGCAGCCTTACCCCCGTGCCCACGAAGGGGGCTCCAGAAACGTCACCATCACCACTGGCAGCCACTGCGGCCACCCAGGA TR:VR 56:5 22:0 chr13 55328526 d_442 T . PASS END=55328653;SVTYPE=DEL;SVLEN=-127 TR:VR 24:18 28:0 chr14 29786188 d_507 A . PASS END=29786235;SVTYPE=DEL;SVLEN=-47 TR:VR 34:16 32:0 chr15 36766946 r_132_0 T [chr15:69784689[C . PASS SVTYPE=BND;MATEID=r_132_1 TR:VR 72:6 43:0 chr15 69784689 r_132_1 C [chr15:36766946[C . PASS SVTYPE=BND;MATEID=r_132_0 TR:VR 72:6 43:0 chr18 3033811 d_895 A . PASS END=3038218;SVTYPE=DEL;SVLEN=-4407 TR:VR 40:5 28:0 chr20 30824457 r_226_0 T [chrUn_KI270442v1:377336[A . Too_low_VAF SVTYPE=BND;MATEID=r_226_1 TR:VR 258:4 195:0 chrUn_KI270442v1 377336 r_226_1 A [chr20:30824457[A . Too_low_VAF SVTYPE=BND;MATEID=r_226_0 TR:VR 258:4 195:0 chr22 50504057 i_873 A . PASS END=50504057;SVTYPE=INS;SVINSLEN=407;SVINSSEQ=CCCCCGGTGCCCCGACATACCCCTGCACCCGGGCTCCACACCCCCAGTGCCCGGCCTTACACCCCTGCACCCCGGGCTCCACACCCCCCCCCCCCGGTGCCCGGCCTTACCCCCTGCACCCCGGGCTCCCCCCCCCCCCCCCCCCGGTGCCCCGGCCTTACCCCGCACCCCCGGGCTCCACACCCCCCCAGTGCCCGGCCTTACCCCTGCACCCCGGACTCCACACCCCCCCCCCCGGTGCCCGGCCTTACCCCCTGCCCCCCGGGCTCCCCCCCCCCCCCCCGGTGCCCGGCCTGCCCCCCTGCACCCGGGCTCCCACCCCCCGGTGCCCGGCCTTGCCCCCTGCACCCCGGGCTCCACACCCCCCCTGGTGCCCGGCCTTACCCCTGCACCCCGGAGCTCCACCC TR:VR 37:4 23:0 chr4 65191474 r_279 A . PASS END=65201059;SVTYPE=DEL;SVLEN=-9585 TR:VR 37:14 39:0 chr5 161356769 r_301_0 A ATGTTTTAG]chr5:161357580] . PASS SVTYPE=BND;MATEID=r_301_1;SVINSLEN=8;SVINSSEQ=TGTTTTAG TR:VR 47:5 30:0 chr5 161357580 r_301_1 T TCTAAAACA]chr5:161356769] . PASS SVTYPE=BND;MATEID=r_301_0;SVINSLEN=8;SVINSSEQ=CTAAAACA TR:VR 47:5 30:0 chr1 168768482 d_140 A . PASS END=168769860;SVTYPE=DEL;SVLEN=-1378 TR:VR 46:9 30:0 chr12 131461823 d_424 G . PASS END=131461934;SVTYPE=DEL;SVLEN=-111 TR:VR 68:36 23:0 chr13 59029018 r_85 G . PASS END=59052203;SVTYPE=DEL;SVLEN=-23185;SVINSLEN=3;SVINSSEQ=TAA TR:VR 55:22 50:0 chr15 37669251 r_133_0 T [chr15:71917756[G . PASS SVTYPE=BND;MATEID=r_133_1 TR:VR 70:9 48:0 chr15 71917756 r_133_1 G [chr15:37669251[G . PASS SVTYPE=BND;MATEID=r_133_0 TR:VR 70:9 48:0 chr2 141034339 d_1065 A . PASS END=141038786;SVTYPE=DEL;SVLEN=-4447 TR:VR 29:10 30:0 chr3 137704529 d_1334 A . PASS END=137704582;SVTYPE=DEL;SVLEN=-53 TR:VR 42:10 34:0 chr4 104225549 d_1424 T . PASS END=104225607;SVTYPE=DEL;SVLEN=-58 TR:VR 27:3 24:0 chr5 163560715 d_1494 T . PASS END=163560788;SVTYPE=DEL;SVLEN=-73 TR:VR 42:13 22:0 chr6 66961243 d_1556 A . PASS END=66961298;SVTYPE=DEL;SVLEN=-55 TR:VR 20:13 27:0 chr8 114600786 r_361_0 G [chr8:114663770[A . Too_low_VAF SVTYPE=BND;MATEID=r_361_1 TR:VR 290:7 53:0 chr8 114663770 r_361_1 A [chr8:114600786[A . Too_low_VAF SVTYPE=BND;MATEID=r_361_0 TR:VR 290:7 53:0 chr8 68939793 d_1706 T . PASS END=68939856;SVTYPE=DEL;SVLEN=-63 TR:VR 60:21 32:0 chr11 5860045 d_324 A . PASS END=5860829;SVTYPE=DEL;SVLEN=-784 TR:VR 28:6 34:0 chr13 63229665 d_443 G . PASS END=63229742;SVTYPE=DEL;SVLEN=-77 TR:VR 52:7 23:0 chr14 32125547 d_508 A . PASS END=32125955;SVTYPE=DEL;SVLEN=-408 TR:VR 34:5 25:0 chr15 37677492 r_134_0 A A]chr18:7960693] . PASS SVTYPE=BND;MATEID=r_134_1 TR:VR 68:8 56:0 chr18 7960693 r_134_1 G G]chr15:37677492] . PASS SVTYPE=BND;MATEID=r_134_0 TR:VR 68:8 56:0 chr19 41184176 d_941 A . PASS END=41190998;SVTYPE=DEL;SVLEN=-6822 TR:VR 47:18 25:0 chr2 14556819 d_975 A . PASS END=14559946;SVTYPE=DEL;SVLEN=-3127 TR:VR 52:5 34:0 chr4 10684146 d_1382 A . PASS END=10684193;SVTYPE=DEL;SVLEN=-47 TR:VR 35:7 30:0 chr7 56368872 d_1601 C . Too_low_VAF END=56369038;SVTYPE=DEL;SVLEN=-166;SVINSLEN=19;SVINSSEQ=AAGGGGTCAGTGTGGGAGG TR:VR 114:3 52:0 chr14 33513187 r_97 G . PASS END=36016048;SVTYPE=DEL;SVLEN=-2502861 TR:VR 54:7 61:0 chr15 37909999 r_135_0 A ]chr20:55536793]A . PASS SVTYPE=BND;MATEID=r_135_1 TR:VR 76:9 67:0 chr20 55536793 r_135_1 A A[chr15:37909999[ . PASS SVTYPE=BND;MATEID=r_135_0 TR:VR 76:9 67:0 chr18 39344702 d_907 C . PASS END=39345058;SVTYPE=DEL;SVLEN=-356 TR:VR 24:6 21:0 chr19 41184208 d_942 A . PASS END=41191026;SVTYPE=DEL;SVLEN=-6818 TR:VR 47:18 25:0 chr2 94174664 i_699 A . PASS END=94174664;SVTYPE=INS;SVINSLEN=2056;SVINSSEQ=CGTATTGTGAAAAAGGAAATATCTTCACATATAAACTAGGCAGAAGCATTCTCAGAAACCAGATTGTGATGTGTGTACTCAACTAACAGAAGTTGAACCTGTCTTTTGAGAGAGCACTCTTGAAACACTCTTTTTGTAGAATCTGCAAGTGGATATTTGGATAGCTTAGAGGACTTCATTGGAAACGGGAATATGTTCATATAAAACCTAGACAGAAGCATTCTCAGAAACATCTTTGTGAGGATTGCATTCAAGTCCCAAATTTGAACATTCCCTTTCATAGAGCAGGTTTGAAACACTCTTTTTGTAGTATATGGAACTGGACATGTGGAGCGCTTTGTGACGTATTGTGAAAAGCGAAATAGATTCCCATATAAACTAGGCAGAAGCATTCTCAGAAACCAGTTTCTGATGTGTGTACTCAACTAACAGAGTTGAACCTTTCTTTTGAGAGAGCATTCTTGAAACACTCTCTTTGTAGACTCTGCAAGGGGATATTTGGATAGCTTTGAGGATTTCGTTGGAAACGGGTATATCTTCATACAAAATCTAGACAGAAGCATTCTCAGAAACATCTTTGCGATGTTTGCATTCAAGTCACAGAGTTGAACATTCCGTTTCATGGAGCAGGTTGGAAACACTCTTTTTGTAGAATCTGGAAGTGAACATTTGGATCACATTCAGGCCAATGGTGAGAAAGGGAATATCCTCGAATGAAAACTAGACAGAAGCATTCTCATAAACTAGTTTGTGATGTGTGTCCTCAGCTAACAGAGCTGAACCTTTCTTTTCATAGAGCAGTTTTAAAACACTCTTTTTGTAGAATCTGCATGTGGATATTTGGAAAGCTTTGAGGATTTCGTTGGAAACGGGAATATCTTCATATAAAACCTAGACAGAAGCATTCTCAGAAACATCTTTGTGATGTTAGCACTCAAGTCACAGAGTTAAACGTTCCTTTTCATAGAGCAGGTTTGAAACACTCTTTTTGGAATCTGGAAGTGGACATTTGGAGCGCTTTGAGGCCTGTGGTGGAAAAAGGAAATATCCTCGCATTAAAAACTAGACAGAAGTATTCTCATAAACTAATTTGTGATGTGTTTGCTCAACTTACAGAGTTGAACCTTTCTTTTGATAGAGCAGCTTTGAAACACTCTTTTTGTAGAATTTGCATGTGGATATTTGTACAGCTTTGAGGATTTCGTTGGAAACGGGAAAATCTTCCTATGAAATAGAGACAGAGGCATTCTCAGAAACATCTTTGGGATGTTAGCATTCAAGTCACAGAGTTGAACATTCCCTATCATAGAGCAGGTTTGTAGCACTCTTTTTGTAGTATCTGGAAGTGGACATTTTGATCGCTTTGGGGCCTAAGGTGAAAAAGGAAATATCTTGCCACAAAAACTACACAGAAGCATTCTCAGAAACTACTTTGTGATGTGTTTACTCAACTAACAGAGTTGAACCTTTCTTTTGATAGAGCAGTTTTGAAACACTCTTTTTGTAGAATCTGCAGGTGGATATTTGGATAGCTTTGAGGATTTCCTTGGAAAAGGGAATATCTTCATATAAAATCTAGACAGAAGCATTCGCAGAACTCATCTTTGTGATGTCTGCATTGAAGTCAGAGTGTTGAAACATTCCCTTTCATAGAGCAGCTTTGAAACACTCTTTTTGTAGTATGTGGAAATGGACATTTAGATCTCTTTGAGGTCTATGGTGAAAAAGGAAATATCTTCGCATAAAAACTAGACGGAAGCAGTCTCCAAAACTTGTTTGGAATGTGTGTACTCAATTAACAGAGTTGAATCTTTCTTTTGATAGAGCAGTTTTGAAACACTCTTTTTGTAGAATCTGCAAGTGGATATTTGGATAGCTTAGAGGACTTCGTTGGAAACGGGAATATCTTCATATAAAACCTAGACAGAAGCATTCTCAGAAACTTCTCTGTGAGGATTGCATTCAAGTCCCAGAGTTGAACATTCCCTTTCATAGAGCAGGTGTGAACACAACATTTTGTAGTATATGGAACTGGACATGTGGAGCGCTTTGTGGC TR:VR 57:3 23:0 chr8 117121194 d_1733 T . PASS END=117121410;SVTYPE=DEL;SVLEN=-216 TR:VR 104:12 36:0 chrX 26992478 d_1892 T . PASS END=26992586;SVTYPE=DEL;SVLEN=-108 TR:VR 28:4 28:0 chr1 175180098 d_142 C . PASS END=175180475;SVTYPE=DEL;SVLEN=-377;SVINSLEN=1;SVINSSEQ=A TR:VR 36:7 28:0 chr10 92488253 r_37_0 T [chr10:92496164[C . PASS SVTYPE=BND;MATEID=r_37_1 TR:VR 40:10 34:0 chr10 92496164 r_37_1 C [chr10:92488253[C . PASS SVTYPE=BND;MATEID=r_37_0 TR:VR 40:10 34:0 chr11 59351667 d_343 G . PASS END=59351716;SVTYPE=DEL;SVLEN=-49 TR:VR 40:7 33:0 chr14 34543841 r_98 C . PASS END=34554399;SVTYPE=DEL;SVLEN=-10558 TR:VR 35:3 29:0 chr15 37974895 r_136_0 C C[chr18:7960904[ . Too_low_VAF SVTYPE=BND;MATEID=r_136_1 TR:VR 81:3 57:0 chr18 7960904 r_136_1 T ]chr15:37974895]T . Too_low_VAF SVTYPE=BND;MATEID=r_136_0 TR:VR 81:3 57:0 chr18 4366278 d_896 T . Too_small_size END=4366313;SVTYPE=DEL;SVLEN=-35 TR:VR 33:15 37:0 chr19 42464686 i_602 G . PASS END=42464695;SVTYPE=INS;SVINSLEN=214;SVINSSEQ=CGAATCCAGTAAATGTTTGGTGCTGTTTATTCACTCATTGAATTCCTTAATAAGCATGTAGTTTCCTGAATGCCTGCTAGATACTAAGCACTATATTAGGTACTAAGTATATTAATGGAAATAAAAACATGGTGGCCCTTAAGGAGCTCATAGTCTTTTAAAGGAGACAAGTCAAACAGTTACAGAACAGAATGACAAGCATGGGTCAGGCACG TR:VR 28:13 21:0 chr2 153976272 d_1067 A . PASS END=153981698;SVTYPE=DEL;SVLEN=-5426 TR:VR 34:14 36:0 chr4 113706403 d_1426 T . PASS END=113706513;SVTYPE=DEL;SVLEN=-110 TR:VR 25:5 36:0 chr4 72684143 r_280 G . PASS END=72697277;SVTYPE=DEL;SVLEN=-13134 TR:VR 38:12 52:0 chr5 172770803 i_1014 G . PASS END=172770803;SVTYPE=INS;SVINSLEN=431;SVINSSEQ=GTCATATTTATTGACCATTTACGTTTCCTTTCCTGTGAAATGCCTACCCAAGGTTTTTGCCCATTTTCTTTTTAAGTTCTTTGCCACTCTATGACAGAATTACTGGAGATTTTATACATTATATTCAATACGTGTGTATATGTGTGTATAATATCAGTACTTAATTATATGTGTTTTAAATGTCTTTCTCCACTTTGTTACTTGTCCTTTCTTGTTTTAGCAATTTTTTTGAGGAACAAAAGTTATTAATTCTGAGCTACTCTGGGCACACTGCCCATGGGTGACCCCTGCTCTGAAAGGAGCAGTAATAAAAAATTTTTTAATAAAATAAAATATTTTAAGACATTATTAATTTTGATAAATTGAATTTATTCATCTTTCTCTTTATGGCTTATGCCTATTTCTTTTGTTTAAGAAATTCTTTTGTAACG TR:VR 32:5 24:0 chr6 77694350 d_1557 G . Too_small_size END=77694386;SVTYPE=DEL;SVLEN=-36 TR:VR 24:3 29:0 chr8 120193334 d_1734 A . PASS END=120193383;SVTYPE=DEL;SVLEN=-49 TR:VR 118:12 27:0 chr8 70838200 r_345 A . PASS END=114701179;SVTYPE=DUP;SVLEN=43862979 TR:VR 182:32 62:0 chr1 175378187 r_19_0 T ]chr8:36674997]C . PASS SVTYPE=BND;MATEID=r_19_1 TR:VR 150:18 59:0 chr8 36674997 r_19_1 C C[chr1:175378187[ . PASS SVTYPE=BND;MATEID=r_19_0 TR:VR 150:18 59:0 chr1 60438046 r_7 T . PASS END=195454213;SVTYPE=DUP;SVLEN=135016167 TR:VR 104:16 69:0 chr11 61106329 d_344 A . Too_small_size END=61106373;SVTYPE=DEL;SVLEN=-44 TR:VR 37:4 25:0 chr15 38079301 r_137_0 T T]chr15:56163208] . PASS SVTYPE=BND;MATEID=r_137_1 TR:VR 67:11 63:0 chr15 56163208 r_137_1 A A]chr15:38079301] . PASS SVTYPE=BND;MATEID=r_137_0 TR:VR 67:11 63:0 chr21 7935811 d_1175 A . Too_low_VAF END=7935881;SVTYPE=DEL;SVLEN=-70 TR:VR 244:3 138:0 chr3 148727765 d_1338 A . PASS END=148728074;SVTYPE=DEL;SVLEN=-309 TR:VR 50:9 32:0 chr3 198127359 r_274_0 A [chr9:95701070[G . PASS SVTYPE=BND;MATEID=r_274_1 TR:VR 98:7 72:1 chr9 95701070 r_274_1 G [chr3:198127359[G . PASS SVTYPE=BND;MATEID=r_274_0 TR:VR 98:7 72:1 chr5 173470635 d_1496 A . PASS END=173472039;SVTYPE=DEL;SVLEN=-1404 TR:VR 34:6 28:0 chr6 8414291 d_1525 A . PASS END=8416289;SVTYPE=DEL;SVLEN=-1998 TR:VR 37:8 33:0 chr11 61641099 d_345 C . PASS END=61643144;SVTYPE=DEL;SVLEN=-2045 TR:VR 49:10 28:0 chr12 48057013 d_377 A . PASS END=48057042;SVTYPE=INS;SVINSLEN=98;SVINSSEQ=TTACATATATAAATATATTTAACATATTACATATTACATATATATATATTATTTAATATATTATATATTACATATATAATATATTATTTAATATATAA TR:VR 43:3 26:0 chr15 38089767 r_138_0 C C]chr15:65480901] . PASS SVTYPE=BND;MATEID=r_138_1 TR:VR 51:3 44:0 chr15 65480901 r_138_1 A A]chr15:38089767] . PASS SVTYPE=BND;MATEID=r_138_0 TR:VR 51:3 44:0 chr19 44291748 d_944 A . Too_small_size END=44291787;SVTYPE=DEL;SVLEN=-39 TR:VR 24:5 26:0 chr20 11096811 d_1094 A . PASS END=11097951;SVTYPE=DEL;SVLEN=-1140 TR:VR 33:5 35:0 chr22 17861859 r_242_0 A ]chrX:69477261]G . PASS SVTYPE=BND;MATEID=r_242_1 TR:VR 72:9 51:0 chrX 69477261 r_242_1 G G[chr22:17861859[ . PASS SVTYPE=BND;MATEID=r_242_0 TR:VR 72:9 51:0 chr6 90295078 d_1558 G . Too_small_size END=90295123;SVTYPE=DEL;SVLEN=-45 TR:VR 23:5 26:0 chr7 158089483 d_1651 A . PASS END=158089535;SVTYPE=DEL;SVLEN=-52;SVINSLEN=13;SVINSSEQ=CCTTCTTCCCTGA TR:VR 43:4 21:0 chr1 11035419 d_16 C . PASS END=11037212;SVTYPE=DEL;SVLEN=-1793 TR:VR 36:5 24:0 chr1 62718751 d_22 T . PASS END=62719527;SVTYPE=DEL;SVLEN=-776 TR:VR 43:11 32:0 chr11 62986484 d_346 C . PASS END=62987169;SVTYPE=DEL;SVLEN=-685 TR:VR 47:28 28:0 chr15 38207888 r_139_0 T ]chr20:55287502]G . PASS SVTYPE=BND;MATEID=r_139_1 TR:VR 82:5 72:0 chr20 55287502 r_139_1 G G[chr15:38207888[ . PASS SVTYPE=BND;MATEID=r_139_0 TR:VR 82:5 72:0 chr16 34065772 d_725 A . Too_low_VAF END=34065807;SVTYPE=INS;SVINSLEN=35;SVINSSEQ=ATAGAATGGAAGGGAATGGAATGCAATGGAATGGA TR:VR 156:3 111:1 chr17 55790891 d_845 C . PASS END=55803446;SVTYPE=DEL;SVLEN=-12555 TR:VR 52:7 38:0 chr18 73267750 r_195_0 T T[chr8:107091186[ . Too_low_VAF SVTYPE=BND;MATEID=r_195_1 TR:VR 154:3 71:0 chr8 107091186 r_195_1 T ]chr18:73267750]T . Too_low_VAF SVTYPE=BND;MATEID=r_195_0 TR:VR 154:3 71:0 chr19 45789785 d_945 A . PASS END=45808156;SVTYPE=DEL;SVLEN=-18371;SVINSLEN=98;SVINSSEQ=GGCGGACAGATCACCTGAGGTCAAGTGTTCGAGACTAGCCTGGTCAACGTGGCAAAATCCTGTCTCTACTAAAAATACAACAAATTAGCCAGGCGTGG TR:VR 41:5 27:0 chr2 154769984 d_1068 A . PASS END=154770651;SVTYPE=DEL;SVLEN=-667 TR:VR 27:10 34:0 chr2 41926743 d_982 A . PASS END=41927009;SVTYPE=DEL;SVLEN=-266 TR:VR 40:8 31:0 chr22_KI270733v1_random 174803 d_1257 G . Too_low_VAF END=175168;SVTYPE=DEL;SVLEN=-365 TR:VR 282:3 241:0 chr4 11991582 d_1383 T . PASS END=11992511;SVTYPE=DEL;SVLEN=-929 TR:VR 32:11 28:0 chr5 175952820 d_1497 G . Too_small_size END=175952861;SVTYPE=DEL;SVLEN=-41 TR:VR 83:13 52:0 chr6 94005479 r_313 T . PASS END=94024052;SVTYPE=DEL;SVLEN=-18573;SVINSLEN=5;SVINSSEQ=AAATT TR:VR 24:15 50:0 chr8 121488318 d_1737 A . PASS END=121489869;SVTYPE=DEL;SVLEN=-1551 TR:VR 123:57 28:0 chr8 72469518 d_1707 A . PASS END=72469743;SVTYPE=DEL;SVLEN=-225 TR:VR 113:9 23:0 chrX 114761887 r_386 A . PASS END=114768216;SVTYPE=DEL;SVLEN=-6329 TR:VR 40:12 37:0 chr1 180867 i_1 A . PASS END=180867;SVTYPE=INS;SVINSLEN=568;SVINSSEQ=CCCTAACCCTACCCTGGCCCAACCCTAACCCAACCCTAACTCTAGCCCTAGCCTAGCCCTGGCCTAAGCCTAAGCCCTAAGCCTAACCCCAACCCCAACCCCAACCCTAACCCTAACCCTAACCCTTCCTCAGCCTCTCAACCTGCTTGGGTTATAGGTATGAGCCCGGGTGCCTGGCCTGGGGCCCTGGCCTGGTACAGCCGTGGCCCTGGCCCTGGCCCTGGCCTGGCCCTGGCCCTGGCCCTGGCCCTAGCCTGGCCCCAGCTGACCTCACCCTGGCCTGGCCTCACCCTCCTCCTCCTCCTGGCCCTGGCCTGGCCCTGGCCCTGGCCCTGGCCCTGGCCTGGCCTGGCCCAGCTGGCCCCTGCCCCTGGCCTGGCCCAGGCCCTGGCCCTGGCCCTGGCCCCCTGGCCCTGGCCCTGGCCTGGCCCTGGCCCTGGCCCTGGCCCTGGCCCTGGCCCTGGCCTGGCCCTGGCCCCTGGCCCTGGCCCTAACCCTAACCCCTAACCCCTAACCCTAACTACTTTAACCCTAAACCTCACCCCACCCCCACCCCCACCCCCACCCC TR:VR 36:4 37:0 chr1 632260 r_0_0 T [chr8:62102864[G . Too_low_VAF SVTYPE=BND;MATEID=r_0_1 TR:VR 86:3 46:1 chr8 62102864 r_0_1 G [chr1:632260[G . Too_low_VAF SVTYPE=BND;MATEID=r_0_0 TR:VR 86:3 46:1 chr11 65009712 r_51 C . PASS END=65501491;SVTYPE=DUP;SVLEN=491779 TR:VR 111:24 52:0 chr12 49451178 d_378 T . PASS END=49451549;SVTYPE=DEL;SVLEN=-371;SVINSLEN=2;SVINSSEQ=GT TR:VR 42:20 24:0 chr14 37065005 d_512 G . PASS END=37066236;SVTYPE=DEL;SVLEN=-1231 TR:VR 33:14 31:0 chr15 38623826 r_140 T . PASS END=69796816;SVTYPE=DUP;SVLEN=31172990 TR:VR 64:6 53:0 chr19 47077283 d_946 A . PASS END=47077761;SVTYPE=DEL;SVLEN=-478 TR:VR 29:6 22:0 chr20 63909761 d_1162 T . PASS END=63914572;SVTYPE=DEL;SVLEN=-4811 TR:VR 70:9 27:0 chr3 155814298 d_1339 T . PASS END=155825258;SVTYPE=DEL;SVLEN=-10960;SVINSLEN=3;SVINSSEQ=TGC TR:VR 71:5 31:0 chr4 128519206 r_285_0 C C]chr4:128533592] . PASS SVTYPE=BND;MATEID=r_285_1 TR:VR 39:17 32:0 chr4 128533592 r_285_1 T T]chr4:128519206] . PASS SVTYPE=BND;MATEID=r_285_0 TR:VR 39:17 32:0 chr5 175953151 r_302_0 T T[chr8:131843887[ . PASS SVTYPE=BND;MATEID=r_302_1 TR:VR 209:13 89:0 chr8 131843887 r_302_1 G ]chr5:175953151]G . PASS SVTYPE=BND;MATEID=r_302_0 TR:VR 209:13 89:0 chr8 72581230 r_347_0 C C]chr8:72732118] . PASS SVTYPE=BND;MATEID=r_347_1 TR:VR 184:15 60:0 chr8 72732118 r_347_1 T T]chr8:72581230] . PASS SVTYPE=BND;MATEID=r_347_0 TR:VR 184:15 60:0 chr9 26907424 d_1772 G . PASS END=26909048;SVTYPE=DEL;SVLEN=-1624 TR:VR 23:10 37:0 chr1 115827781 d_37 T . PASS END=115828243;SVTYPE=DEL;SVLEN=-462 TR:VR 25:4 27:0 chr1 63540389 r_8_0 T TTTTT]chr1:185538649] . PASS SVTYPE=BND;MATEID=r_8_1;SVINSLEN=4;SVINSSEQ=TTTT TR:VR 97:8 55:0 chr1 185538649 r_8_1 A AAAAA]chr1:63540389] . PASS SVTYPE=BND;MATEID=r_8_0;SVINSLEN=4;SVINSSEQ=AAAA TR:VR 97:8 55:0 chr11 65195081 d_347 A . PASS END=65195500;SVTYPE=DEL;SVLEN=-419 TR:VR 80:4 23:0 chr14_GL000225v1_random 93100 d_627 C . Too_low_VAF END=93645;SVTYPE=DEL;SVLEN=-545;SVINSLEN=198;SVINSSEQ=TTGGGAAGGAGCTCTGGTCTACCCTCTGCCTACAATAGGCTTTATGACTTATACCTTCACTGATAACCTAGGTGATGTGACATAGTCTAGGCTCTGCCTACACGGGAATTCTCACATATCCCTGCACTGATCACTCCAGGTGACGGACTCTTGTCTTGGATTTGCCTATGGGGGCATTGTGAAATATCTCTGCACTGA TR:VR 702:3 623:0 chr15 44336648 d_694 G . PASS END=44346681;SVTYPE=DEL;SVLEN=-10033 TR:VR 30:6 19:0 chr18 74492329 r_196 G . PASS END=74502062;SVTYPE=DEL;SVLEN=-9733 TR:VR 31:16 34:0 chr19 48561190 r_200 G . PASS END=48604397;SVTYPE=DUP;SVLEN=43207 TR:VR 79:17 40:0 chr2 4232560 d_971 T . PASS END=4232797;SVTYPE=DEL;SVLEN=-237;SVINSLEN=4;SVINSSEQ=ATTT TR:VR 34:15 28:0 chr3 163099540 d_1340 A . PASS END=163099998;SVTYPE=DEL;SVLEN=-458 TR:VR 53:6 21:0 chr4 128522333 r_286_0 C [chr4:128535635[C . PASS SVTYPE=BND;MATEID=r_286_1 TR:VR 36:17 29:0 chr4 128535635 r_286_1 C [chr4:128522333[C . PASS SVTYPE=BND;MATEID=r_286_0 TR:VR 36:17 29:0 chr4 77054127 r_282 C . PASS END=77059535;SVTYPE=DEL;SVLEN=-5408 TR:VR 25:8 31:0 chr5 175981925 i_1016 A . PASS END=175981925;SVTYPE=INS;SVINSLEN=170;SVINSSEQ=AACCAACAATGAAGAAACAGAAACCAGAACAGAGGATGGGTACATGTCAAAGAGATACAGCAGCCAATGTAAAAAAGCTACTAATGGTCAAAACTGGAACAATTCAAGCAATAAACAGAGTAGTATGAGGGGCTTTAAAAAGTTCATGGAAAAAACGCAATTGAAAGATA TR:VR 84:10 29:0 chr5 51565585 d_1469 C . PASS END=51565873;SVTYPE=DEL;SVLEN=-288 TR:VR 55:17 33:0 chr8 72731744 r_348_0 A [chr8:72731774[TTATTTATTTTT . PASS SVTYPE=BND;MATEID=r_348_1;SVINSLEN=11;SVINSSEQ=TTATTTATTTT TR:VR 88:14 29:0 chr8 72731774 r_348_1 T [chr8:72731744[AAAATAAATAAT . PASS SVTYPE=BND;MATEID=r_348_0;SVINSLEN=11;SVINSSEQ=AAAATAAATAA TR:VR 88:14 29:0 chr9 27591427 i_1227 C . PASS END=27591457;SVTYPE=INS;SVINSLEN=188;SVINSSEQ=ACTGGATGCTGAGATGCAAAAATCTATACACAAGATCAATGAAACCAAGTATTGGTTCTTCAAAAGAATAAATAAGACAGACCACCCTAGCTATATTAACAAAGAAAAAAAGGAGATCCAAATAAGTCCAATGAGAAATGACAATGATGATATTATAACTAATCCTACAGAAATCAAAAACTGCATGT TR:VR 38:4 26:0 chr1 118093920 d_38 A . PASS END=118094177;SVTYPE=DEL;SVLEN=-257 TR:VR 38:8 35:0 chr1 63540392 r_9_0 A [chr1:185538639[T . PASS SVTYPE=BND;MATEID=r_9_1 TR:VR 97:13 55:0 chr1 185538639 r_9_1 T [chr1:63540392[T . PASS SVTYPE=BND;MATEID=r_9_0 TR:VR 97:13 55:0 chr15 46091837 d_695 A . PASS END=46091959;SVTYPE=DEL;SVLEN=-122 TR:VR 23:17 40:0 chr20 14184326 d_1096 C . PASS END=14184575;SVTYPE=DEL;SVLEN=-249 TR:VR 28:10 20:0 chr3 167086504 d_1341 T . Too_small_size END=167086539;SVTYPE=DEL;SVLEN=-35 TR:VR 37:4 29:0 chr3 26440354 d_1284 T . PASS END=26440490;SVTYPE=DEL;SVLEN=-136 TR:VR 27:10 30:0 chr5 176388177 r_303 T . Too_low_VAF END=176461142;SVTYPE=DUP;SVLEN=72965 TR:VR 159:5 52:0 chr5 52193469 r_293 A . PASS END=52258759;SVTYPE=DEL;SVLEN=-65290 TR:VR 55:6 73:0 chr7 158147099 i_1139 C . PASS END=158147099;SVTYPE=INS;SVINSLEN=3212;SVINSSEQ=CCCTCAAGCTGACACCCCATCTCACGCCACGTGTCTTTCCCCCCTCAATGACACCCCATCTCACGCCACGTGCCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATATCACGCCACGTGTCTTTCCCCTTCACTGACACCCCATCTCACGCCACGTGTCTTTCCCCTTCAATGACACCCCATCTCATGCCACACGTCTTTCCCCCTCAATGACATCCCATCTCACGCCACGTGTCTTTCCCTCTCACTGACACCCCATCTCATGCCACGTGTCTTTCCCCCTCACTGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCTTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCACTGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACACCACACGTCTTTCCCCCCTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCACTGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCTTCAATGACACCCCATCTCATGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCATTCCCCCTCACTGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACATGTCTTTCCCCCTCACTGACACCCCATCTCATGCCACACGTCTTTCCCTCACTGAAACCCCATCTCACGCCACGTGTCTTTCCCCCTCACTGACACCCCCATCTCACGCCACGTGTCATTCCCCCTCACTGACACCCCATCTCACGCCACGTGTCTTTCCCCTTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCACTGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCACGCGCGCGCGCGCGCCTCACGACATCCCATCTCACCACGTGTCTTTCCCCCCTTCAATGACACCCCATGTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCTTCCCCCTCAATGACACCCCATCTCACGCCAGGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACACGTCATTCCCCCCTCACTGACACCCCATCTCACGCCACACGTCTTTCCCCCTCACTGACACCCCATCTCACGCCACCGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCATTCCCCCTCACTGACACCCCATCTCACGCCACGTGTCATTCCCCCTCACTGACACCCCATCTCACGCCACGTATCTTTCCCCCTCAACCTCAATGACACCCCATCTCACGCCACCGTGTCATTCCCCCTTCAATGACACCCCATCTCACGCCACGTGTCATTCCCCCTTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCACTGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACACGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACACGTCTTTCCCCCTCACTGACACCCCATCTCACGCCACATGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCTTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCATGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTATCTTTCCCCCTCACTGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACGCCCCATCCTCACGCCACACGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCCCCCCCTCTCACTGACATCCCATCTCACGCGACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCATTCCCCCCTCACTGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCTTCAATGACACCCCATCTCATGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCATTTCCCCCTCACTGACACCCCATCTCACGCCACGTGTCTTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCCACGCCACGTGTCTTTCCCCCTCACTGACACCCCATCTCATGCCACACGTCTTTCCCCCTCACTGAAACCCCATCTCACGCCACGTGTCTTTCCCCCTCAGCTGACACCCCATCTCACGCCACGTGTCATTCCCCCTCACTGAACACCCCATCTCACGCCACGCGTCTTCTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCTTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCACTGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCTTTTCCCCCTCACCTGACACCCCATCTCATGCCACACGTCTTTCCCCCTCACTGAAACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCCCATCTCACGCTCACGTGTCATTCCCCCATCATGACACCCCATCTCACGCCACACGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCTTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCTCACTGACACCCCATCTCACGCCACGTGTCTTTC TR:VR 60:3 39:0 chr7 57975301 i_1104 C . PASS END=57975308;SVTYPE=INS;SVINSLEN=350;SVINSSEQ=TGTCTAGTATTTTTGTGAATATATTTCCTTTTCTATCATAGACCTAAAATCGCTGCAAATGTCCACTTGCAGATTCTACAAAAAGAGAGTTTCAAAACTGCTCAATCAAAAGAAAGGTTTAACTCTAAGAGATGAATGCTCACATAACAAAGAAGTTTCTCAGATTGTTTCTGTCTAGATTTTATGTGAAGATATTTCCTTTTCTAGCATTGGCCTCAAAGCGCTCCAAATGTCCACTTGCGGATTCTACAAAAAGAGAGTTGTAAAACTGCCCTAGCAAAAGAAAGGTTTAACTAGGCGAGATGAATGTACACATCTCAAAAATGTTTCTCAGGTTGTTTCTGTCTAGA TR:VR 39:10 22:0 chr8 23843407 d_1675 T . PASS END=23843473;SVTYPE=DEL;SVLEN=-66 TR:VR 32:22 27:0 chrX 119366568 d_1921 G . PASS END=119383916;SVTYPE=DEL;SVLEN=-17348;SVINSLEN=1;SVINSSEQ=A TR:VR 39:14 41:0 chr1 11988168 r_3 T . PASS END=12005949;SVTYPE=DEL;SVLEN=-17781 TR:VR 44:6 32:0 chr1 190453055 i_62 A . Too_small_size END=190453055;SVTYPE=INS;SVINSLEN=46;SVINSSEQ=CACATTCTTAGAATCCTAAAATCAGGTAGCTTCACTCAATCTGTGC TR:VR 46:21 28:0 chr1 6458669 d_15 A . PASS END=6465880;SVTYPE=DEL;SVLEN=-7211 TR:VR 39:6 34:0 chr10 17596060 d_207 A . PASS END=17596667;SVTYPE=DEL;SVLEN=-607;SVINSLEN=1;SVINSSEQ=T TR:VR 41:4 24:0 chr15 51929867 d_696 G . PASS END=51932165;SVTYPE=DEL;SVLEN=-2298;SVINSLEN=6;SVINSSEQ=CCCTGC TR:VR 26:13 23:0 chr17 16894811 r_164_0 A [chr17:19628532[C . PASS SVTYPE=BND;MATEID=r_164_1 TR:VR 112:66 52:0 chr17 19628532 r_164_1 C [chr17:16894811[C . PASS SVTYPE=BND;MATEID=r_164_0 TR:VR 112:66 52:0 chr20 15730062 d_1097 A . PASS END=15731992;SVTYPE=DEL;SVLEN=-1930 TR:VR 32:12 38:1 chr3 168300288 d_1342 T . PASS END=168300337;SVTYPE=DEL;SVLEN=-49 TR:VR 31:18 30:0 chr3 2878919 r_254_0 G G]chr3:2886205] . PASS SVTYPE=BND;MATEID=r_254_1 TR:VR 50:5 45:0 chr3 2886205 r_254_1 A A]chr3:2878919] . PASS SVTYPE=BND;MATEID=r_254_0 TR:VR 50:5 45:0 chr4 134701401 d_1428 T . PASS END=134701454;SVTYPE=DEL;SVLEN=-53 TR:VR 25:8 26:0 chr4 80843789 d_1415 T . PASS END=80848918;SVTYPE=DEL;SVLEN=-5129 TR:VR 33:16 33:0 chr5 177348798 r_304 C . PASS END=177370867;SVTYPE=DEL;SVLEN=-22069;SVINSLEN=151;SVINSSEQ=GCTTGAACTCGTGAGGTGGAGGTTGCAGTGAGCTGAGATCGCACCACTGCATTCCAGCCTGGGTGATAGAGCATGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAACCTCTACTAAAAACACAAAAACTAGCTGGGCGTGGTGGT TR:VR 111:10 39:0 chr5 52531092 r_294_0 C C[chr8:114995625[ . Too_low_VAF SVTYPE=BND;MATEID=r_294_1 TR:VR 176:3 48:0 chr8 114995625 r_294_1 C ]chr5:52531092]C . Too_low_VAF SVTYPE=BND;MATEID=r_294_0 TR:VR 176:3 48:0 chr7 57976242 i_1105 A . PASS END=57976247;SVTYPE=INS;SVINSLEN=226;SVINSSEQ=GAGTGGTTGCAGGACTGCTCAATCAAAAGAAAGGTTCAACTCGGTGAGAATGCAAACATCACAAAGAAGCTTCTCAGAATTCTTCTGTCTATTTTTTATGTGAAGATATGTCCTTTTCCAACATAGGCATCAAAGTGCTCCAAATGACCACTTGCAGATTCTACAAAAAGAGAGCTTCAAAACTGCCCTATCAAAAGTCCACTTGCAGACGCTACAAAAAGAGAGT TR:VR 38:10 22:0 chr8 123507577 d_1739 T . PASS END=123507794;SVTYPE=DEL;SVLEN=-217 TR:VR 103:6 30:0 chr8 25534442 d_1676 A . PASS END=25534542;SVTYPE=DEL;SVLEN=-100 TR:VR 15:3 21:0 chr8 75023762 d_1708 T . PASS END=75023855;SVTYPE=DEL;SVLEN=-93 TR:VR 88:6 39:0 chr9 37729381 r_367_0 T T]chr9:98757646] . PASS SVTYPE=BND;MATEID=r_367_1 TR:VR 52:4 60:0 chr9 98757646 r_367_1 G G]chr9:37729381] . PASS SVTYPE=BND;MATEID=r_367_0 TR:VR 52:4 60:0 chrX 30717409 d_1894 A . PASS END=30717719;SVTYPE=DEL;SVLEN=-310 TR:VR 32:13 41:0 chr1 191816562 d_144 A . PASS END=191824725;SVTYPE=DEL;SVLEN=-8163 TR:VR 67:4 45:0 chr12 55633869 r_63 T . PASS END=70068390;SVTYPE=DUP;SVLEN=14434521 TR:VR 65:9 52:0 chr15 54287672 r_141_0 C [chr15:54290264[C . PASS SVTYPE=BND;MATEID=r_141_1 TR:VR 34:7 29:0 chr15 54290264 r_141_1 C [chr15:54287672[C . PASS SVTYPE=BND;MATEID=r_141_0 TR:VR 34:7 29:0 chr17 16953006 r_165_0 T T]chr8:31374094] . PASS SVTYPE=BND;MATEID=r_165_1 TR:VR 95:53 67:0 chr8 31374094 r_165_1 A A]chr17:16953006] . PASS SVTYPE=BND;MATEID=r_165_0 TR:VR 95:53 67:0 chr17 58614224 d_846 T . PASS END=58620647;SVTYPE=DEL;SVLEN=-6423 TR:VR 51:7 29:0 chr2 164319596 d_1070 G . PASS END=164321493;SVTYPE=DEL;SVLEN=-1897 TR:VR 49:21 37:0 chr3 2879958 r_255_0 G [chr3:2886222[C . PASS SVTYPE=BND;MATEID=r_255_1 TR:VR 46:4 41:0 chr3 2886222 r_255_1 C [chr3:2879958[C . PASS SVTYPE=BND;MATEID=r_255_0 TR:VR 46:4 41:0 chr4 13674565 d_1384 C . PASS END=13674811;SVTYPE=DEL;SVLEN=-246 TR:VR 35:8 33:0 chr5 53012439 d_1470 G . Too_small_size END=53012484;SVTYPE=DEL;SVLEN=-45 TR:VR 46:11 20:0 chr7 100341621 r_328 C . PASS END=100413101;SVTYPE=DUP;SVLEN=71480 TR:VR 73:5 59:0 chr8 28919238 r_337 C . PASS END=28920607;SVTYPE=DEL;SVLEN=-1369 TR:VR 23:6 29:0 chr8 75826721 d_1709 A . PASS END=75826819;SVTYPE=DEL;SVLEN=-98 TR:VR 110:81 26:0 chr9 37729535 r_368_0 A [chr9:98757683[C . PASS SVTYPE=BND;MATEID=r_368_1 TR:VR 52:4 59:0 chr9 98757683 r_368_1 C [chr9:37729535[C . PASS SVTYPE=BND;MATEID=r_368_0 TR:VR 52:4 59:0 chrX 31356739 d_1895 A . PASS END=31357285;SVTYPE=DEL;SVLEN=-546 TR:VR 37:4 27:0 chr1 120677939 d_39 C . Too_small_size END=120677981;SVTYPE=DEL;SVLEN=-42 TR:VR 25:12 19:0 chr1 192504536 d_145 C . PASS END=192504878;SVTYPE=DEL;SVLEN=-342 TR:VR 51:15 31:0 chr10 92712738 d_298 C . PASS END=92712789;SVTYPE=DEL;SVLEN=-51 TR:VR 19:8 24:0 chr13 112290211 d_477 A . PASS END=112290290;SVTYPE=INS;SVINSLEN=79;SVINSSEQ=GGATGGAGCAAGGTAAGCATGGACTGTTTCTTCAGGATGGGCCCAGGTAAGCATGGACCATTCCTTCAGGATGGAGCCA TR:VR 79:4 26:0 chr13 74188067 r_86 T . PASS END=74363898;SVTYPE=DEL;SVLEN=-175831 TR:VR 88:26 67:0 chr15 54290233 r_142 C . PASS END=65543416;SVTYPE=DEL;SVLEN=-11253183 TR:VR 55:7 53:0 chr17 61109319 r_186_0 A [chr2:211217471[TATATATATATACACACACACACT . Too_low_VAF SVTYPE=BND;MATEID=r_186_1;SVINSLEN=23;SVINSSEQ=TATATATATATACACACACACAC TR:VR 88:4 60:0 chr2 211217471 r_186_1 T [chr17:61109319[GTGTGTGTGTGTATATATATATAT . Too_low_VAF SVTYPE=BND;MATEID=r_186_0;SVINSLEN=23;SVINSSEQ=GTGTGTGTGTGTATATATATATA TR:VR 88:4 60:0 chr2 166287952 d_1071 A . Too_small_size END=166287992;SVTYPE=DEL;SVLEN=-40 TR:VR 43:16 20:0 chr3 29524279 d_1285 A . Too_small_size END=29524317;SVTYPE=DEL;SVLEN=-38 TR:VR 38:11 18:0 chr5 178015999 r_305_0 T T]chr5:178022343] . PASS SVTYPE=BND;MATEID=r_305_1 TR:VR 96:11 37:0 chr5 178022343 r_305_1 G G]chr5:178015999] . PASS SVTYPE=BND;MATEID=r_305_0 TR:VR 96:11 37:0 chr5 53054564 d_1471 C . PASS END=53055954;SVTYPE=DEL;SVLEN=-1390 TR:VR 38:11 31:0 chr7 57979965 i_1106 T . PASS END=57979965;SVTYPE=INS;SVINSLEN=181;SVINSSEQ=CCAAATGTCCACTTGCAGATTCTACAAAAACAGATTTTCAAAACTGCTCAATCAAAAGAAAGGTTTCACTCTTTGAGATGAATGAGCACATCAAAACTGCTCAATCAAAAGAAAGGTTTCACTCTTTGAGATGAATGAGCACATCAAAAAGAAGTTTCTCAGATTGCTTCTGTCTAGATTT TR:VR 36:9 27:0 chr8 126024105 d_1740 T . PASS END=126024781;SVTYPE=DEL;SVLEN=-676 TR:VR 109:7 38:0 chr8 77033827 r_349 C . PASS END=77047365;SVTYPE=DEL;SVLEN=-13538 TR:VR 151:22 40:0 chrX 121685806 d_1924 T . PASS END=121696094;SVTYPE=DEL;SVLEN=-10288 TR:VR 40:5 26:0 chr1 73049129 r_10 A . PASS END=73061015;SVTYPE=DEL;SVLEN=-11886 TR:VR 48:15 47:0 chr10 31213965 d_208 T . PASS END=31214280;SVTYPE=DEL;SVLEN=-315 TR:VR 31:17 34:0 chr11 75328679 d_349 C . PASS END=75328732;SVTYPE=DEL;SVLEN=-53 TR:VR 46:19 17:0 chr12 56182450 d_380 G . PASS END=56196356;SVTYPE=DEL;SVLEN=-13906 TR:VR 63:25 29:0 chr13 77677251 d_452 A . PASS END=77677441;SVTYPE=DEL;SVLEN=-190 TR:VR 51:5 39:0 chr15 54296966 r_143 T . PASS END=56276702;SVTYPE=DEL;SVLEN=-1979736 TR:VR 59:5 49:0 chr18 76722874 d_910 G . PASS END=76726902;SVTYPE=DEL;SVLEN=-4028 TR:VR 25:17 26:0 chr2 166534123 r_212 A . PASS END=196139219;SVTYPE=DEL;SVLEN=-29605096;SVINSLEN=1;SVINSSEQ=A TR:VR 60:5 53:0 chr2 57886726 d_985 C . PASS END=57886932;SVTYPE=DEL;SVLEN=-206 TR:VR 24:9 30:0 chr20 64126785 d_1163 A . PASS END=64127141;SVTYPE=DEL;SVLEN=-356;SVINSLEN=14;SVINSSEQ=TTACCACAGCTTTA TR:VR 53:3 18:0 chr3 172412964 r_268 C . PASS END=172430190;SVTYPE=DEL;SVLEN=-17226 TR:VR 68:15 40:0 chr3 31519230 d_1286 C . PASS END=31519885;SVTYPE=DEL;SVLEN=-655 TR:VR 22:13 31:0 chr4 85071658 r_283_0 A A]chr4:159071910] . PASS SVTYPE=BND;MATEID=r_283_1 TR:VR 50:5 56:0 chr4 159071910 r_283_1 C C]chr4:85071658] . PASS SVTYPE=BND;MATEID=r_283_0 TR:VR 50:5 56:0 chr5 178016022 r_306_0 C [chr5:178022432[C . PASS SVTYPE=BND;MATEID=r_306_1 TR:VR 95:14 37:0 chr5 178022432 r_306_1 C [chr5:178016022[C . PASS SVTYPE=BND;MATEID=r_306_0 TR:VR 95:14 37:0 chr5 54322725 d_1472 A . PASS END=54322804;SVTYPE=DEL;SVLEN=-79 TR:VR 38:10 37:0 chr7 110985396 r_329 T . PASS END=111320492;SVTYPE=DUP;SVLEN=335096 TR:VR 91:12 67:0 chr9 42216113 d_1775 A . PASS END=42222807;SVTYPE=DEL;SVLEN=-6694 TR:VR 59:10 50:0 chrX 122217233 d_1925 T . PASS END=122217481;SVTYPE=DEL;SVLEN=-248 TR:VR 34:9 26:0 chr10 98280547 d_299 C . PASS END=98280738;SVTYPE=DEL;SVLEN=-191;SVINSLEN=1;SVINSSEQ=A TR:VR 30:21 38:0 chr11 76867256 d_350 G . PASS END=76867476;SVTYPE=DEL;SVLEN=-220 TR:VR 35:9 17:0 chr12 56608672 r_64 C . PASS END=56809788;SVTYPE=DUP;SVLEN=201116 TR:VR 90:6 48:0 chr15 54350733 r_144_0 G G[chr20:55517724[ . PASS SVTYPE=BND;MATEID=r_144_1 TR:VR 97:9 67:0 chr20 55517724 r_144_1 T ]chr15:54350733]T . PASS SVTYPE=BND;MATEID=r_144_0 TR:VR 97:9 67:0 chr17 63462014 i_495 T . PASS END=63462014;SVTYPE=INS;SVINSLEN=113;SVINSSEQ=ACCGGCGTGAGCCACTGCACCTGGCCCAGTTAAGCCACTTAGCCACTTTTACCTCTGCTGGGCCCAAGGGAATGGGACATGGGGCTGATAAGCAGGGCTGGGGACCAGCTTCA TR:VR 46:13 35:0 chr19 53162532 d_947 T . PASS END=53174656;SVTYPE=DEL;SVLEN=-12124 TR:VR 44:17 35:0 chr3 41846396 d_1287 T . Too_small_size END=41846434;SVTYPE=DEL;SVLEN=-38 TR:VR 27:20 33:0 chr4 148730145 d_1429 C . PASS END=148730455;SVTYPE=DEL;SVLEN=-310 TR:VR 52:14 28:0 chr4 85071665 r_284_0 C [chr4:159071927[G . PASS SVTYPE=BND;MATEID=r_284_1 TR:VR 50:4 56:0 chr4 159071927 r_284_1 G [chr4:85071665[G . PASS SVTYPE=BND;MATEID=r_284_0 TR:VR 50:4 56:0 chr8 31184646 r_338 C . PASS END=38596540;SVTYPE=DUP;SVLEN=7411894 TR:VR 131:84 66:0 chr8 77400399 r_350 C . PASS END=77408877;SVTYPE=DEL;SVLEN=-8478 TR:VR 101:71 35:0 chrX 122460976 d_1926 T . PASS END=122461033;SVTYPE=DEL;SVLEN=-57 TR:VR 33:4 30:0 chrX 32440878 d_1896 T . PASS END=32441566;SVTYPE=DEL;SVLEN=-688 TR:VR 38:17 39:0 chr1 195432547 r_21_0 G [chr8:93403968[A . PASS SVTYPE=BND;MATEID=r_21_1 TR:VR 164:12 59:0 chr8 93403968 r_21_1 A [chr1:195432547[A . PASS SVTYPE=BND;MATEID=r_21_0 TR:VR 164:12 59:0 chr11 77623868 d_351 C . PASS END=77626931;SVTYPE=DEL;SVLEN=-3063 TR:VR 57:7 27:0 chr12 56661971 r_65_0 C ]chr17:39112189]A . PASS SVTYPE=BND;MATEID=r_65_1 TR:VR 100:7 45:0 chr17 39112189 r_65_1 A A[chr12:56661971[ . PASS SVTYPE=BND;MATEID=r_65_0 TR:VR 100:7 45:0 chr15 54902012 r_145 G . PASS END=71803198;SVTYPE=DUP;SVLEN=16901186 TR:VR 70:6 65:0 chr17 19831783 d_821 T . PASS END=19832084;SVTYPE=DEL;SVLEN=-301 TR:VR 99:8 24:0 chr19 53162532 d_948 T . Too_small_size END=53162572;SVTYPE=DEL;SVLEN=-40 TR:VR 38:17 24:0 chr3 172429239 r_269_0 C [chr6:146635991[T . PASS SVTYPE=BND;MATEID=r_269_1 TR:VR 54:11 54:0 chr6 146635991 r_269_1 T [chr3:172429239[T . PASS SVTYPE=BND;MATEID=r_269_0 TR:VR 54:11 54:0 chr3 41909465 d_1288 A . PASS END=41913529;SVTYPE=DEL;SVLEN=-4064 TR:VR 30:7 30:0 chr4 149204538 d_1430 T . PASS END=149206906;SVTYPE=DEL;SVLEN=-2368 TR:VR 26:10 35:0 chr4 85136726 d_1418 A . PASS END=85153708;SVTYPE=DEL;SVLEN=-16982 TR:VR 37:3 56:0 chr8 32324311 r_339_0 G [chr8:36283497[A . PASS SVTYPE=BND;MATEID=r_339_1 TR:VR 125:64 52:0 chr8 36283497 r_339_1 A [chr8:32324311[A . PASS SVTYPE=BND;MATEID=r_339_0 TR:VR 125:64 52:0 chrX 124598480 d_1927 G . PASS END=124600872;SVTYPE=DEL;SVLEN=-2392;SVINSLEN=1;SVINSSEQ=T TR:VR 28:5 42:0 chrX 32882683 d_1897 A . PASS END=32883073;SVTYPE=DEL;SVLEN=-390 TR:VR 43:6 26:0 chr11 10191339 d_329 T . PASS END=10191697;SVTYPE=DEL;SVLEN=-358 TR:VR 25:7 35:0 chr11 79753557 r_52_0 A A[chr15:72926952[ . PASS SVTYPE=BND;MATEID=r_52_1 TR:VR 75:12 65:0 chr15 72926952 r_52_1 T ]chr11:79753557]T . PASS SVTYPE=BND;MATEID=r_52_0 TR:VR 75:12 65:0 chr12 56662150 r_66_0 T T[chr17:38472111[ . PASS SVTYPE=BND;MATEID=r_66_1 TR:VR 89:7 43:0 chr17 38472111 r_66_1 G ]chr12:56662150]G . PASS SVTYPE=BND;MATEID=r_66_0 TR:VR 89:7 43:0 chr14 41883497 d_520 G . PASS END=41883615;SVTYPE=DEL;SVLEN=-118 TR:VR 44:15 23:0 chr17 20000196 d_822 A . PASS END=20001314;SVTYPE=DEL;SVLEN=-1118 TR:VR 105:11 19:0 chr17 66715215 d_848 G . PASS END=66716611;SVTYPE=DEL;SVLEN=-1396 TR:VR 45:3 24:0 chr19 54297003 r_201_0 T T]chr19:54577177] . PASS SVTYPE=BND;MATEID=r_201_1 TR:VR 56:3 59:1 chr19 54577177 r_201_1 C C]chr19:54297003] . PASS SVTYPE=BND;MATEID=r_201_0 TR:VR 56:3 59:1 chr20 19924910 d_1098 T . PASS END=19925753;SVTYPE=DEL;SVLEN=-843 TR:VR 40:8 26:0 chr21 7944278 i_805 A . Too_low_VAF END=7944278;SVTYPE=INS;SVINSLEN=58;SVINSSEQ=CTCCACTCCACTCCACTCCACTCCACATTTCATTCCACTCCACTCCATTTCACTCCTT TR:VR 351:7 252:1 chr3 172429787 r_270_0 C C]chr6:146612635] . PASS SVTYPE=BND;MATEID=r_270_1 TR:VR 56:11 52:0 chr6 146612635 r_270_1 T T]chr3:172429787] . PASS SVTYPE=BND;MATEID=r_270_0 TR:VR 56:11 52:0 chr3 49016860 r_257_0 T T[chr6:41869027[ . PASS SVTYPE=BND;MATEID=r_257_1 TR:VR 75:20 46:0 chr6 41869027 r_257_1 G ]chr3:49016860]G . PASS SVTYPE=BND;MATEID=r_257_0 TR:VR 75:20 46:0 chr5 553853 i_976 T . PASS END=553853;SVTYPE=INS;SVINSLEN=53;SVINSSEQ=AACAGCCTCCCATCTCTAACAAACCTAACAGCCTCCCATCTCTAACAAACCTA TR:VR 42:4 19:0 chr7 113930753 i_1123 C . PASS END=113930761;SVTYPE=INS;SVINSLEN=93;SVINSSEQ=CGCGGCTCCCAAACCACGCCTTCCCGGACCTCACAGTCCCGGCCCGGAGCGGACGAGCCGCCCCGGCGGTGAACGGGGAGGAGGCGTGGAACC TR:VR 53:4 31:0 chr7 158335568 d_1655 A . PASS END=158335736;SVTYPE=DEL;SVLEN=-168;SVINSLEN=73;SVINSSEQ=AGGACACACCCCGGCAGACGTCACTCACACCCACACTCACCACAAGAGGTGACACCTGCAGACGTCACTCACA TR:VR 55:4 46:0 chr8 35931109 r_340_0 G [chr8:39936339[G . PASS SVTYPE=BND;MATEID=r_340_1 TR:VR 95:44 48:0 chr8 39936339 r_340_1 G [chr8:35931109[G . PASS SVTYPE=BND;MATEID=r_340_0 TR:VR 95:44 48:0 chrX 130193102 d_1928 T . PASS END=130193776;SVTYPE=DEL;SVLEN=-674 TR:VR 27:9 28:0 chr1 201015346 d_147 A . PASS END=201015865;SVTYPE=DEL;SVLEN=-519 TR:VR 44:10 22:0 chr1 75458550 d_24 A . Too_small_size END=75458588;SVTYPE=DEL;SVLEN=-38 TR:VR 36:5 22:0 chr10 3799528 r_31 G . PASS END=3832125;SVTYPE=DEL;SVLEN=-32597;SVINSLEN=7;SVINSSEQ=TTTTTGT TR:VR 52:12 47:0 chr11 80498117 d_352 T . PASS END=80498417;SVTYPE=DEL;SVLEN=-300 TR:VR 33:14 28:0 chr14 51868793 r_99_0 A A[chr20:57515173[ . PASS SVTYPE=BND;MATEID=r_99_1 TR:VR 93:10 47:0 chr20 57515173 r_99_1 C ]chr14:51868793]C . PASS SVTYPE=BND;MATEID=r_99_0 TR:VR 93:10 47:0 chr15 55287744 r_146 T . PASS END=62109738;SVTYPE=DUP;SVLEN=6821994 TR:VR 72:9 42:0 chr17 71496989 r_188 C . Too_low_VAF END=71610125;SVTYPE=DEL;SVLEN=-113136;SVINSLEN=21;SVINSSEQ=TTATATCTATATATATATCTA TR:VR 87:3 78:0 chr17_KI270729v1_random 191566 r_191_0 G ]chr8:38463877]G . PASS SVTYPE=BND;MATEID=r_191_1 TR:VR 98:44 41:0 chr8 38463877 r_191_1 G G[chr17_KI270729v1_random:191566[ . PASS SVTYPE=BND;MATEID=r_191_0 TR:VR 98:44 41:0 chr3 173306927 d_1345 A . Too_small_size END=173306967;SVTYPE=DEL;SVLEN=-40 TR:VR 48:7 32:0 chr3 49016877 r_258_0 A ]chr6:41867485]T . PASS SVTYPE=BND;MATEID=r_258_1 TR:VR 77:18 45:0 chr6 41867485 r_258_1 T T[chr3:49016877[ . PASS SVTYPE=BND;MATEID=r_258_0 TR:VR 77:18 45:0 chr4 15466692 d_1385 T . Too_small_size END=15466729;SVTYPE=DEL;SVLEN=-37 TR:VR 23:9 42:0 chr6 170539202 d_1572 A . PASS END=170539519;SVTYPE=DEL;SVLEN=-317 TR:VR 20:12 23:0 chr7 114455142 d_1624 T . PASS END=114462239;SVTYPE=DEL;SVLEN=-7097 TR:VR 45:22 36:0 chr9 63739898 d_1777 C . PASS END=63740063;SVTYPE=DEL;SVLEN=-165 TR:VR 22:18 33:0 chrX 131066799 d_1929 G . PASS END=131066859;SVTYPE=DEL;SVLEN=-60 TR:VR 34:10 37:0 chr1 202220099 d_148 C . PASS END=202220438;SVTYPE=DEL;SVLEN=-339 TR:VR 41:5 17:0 chr1 80183893 d_25 T . PASS END=80184173;SVTYPE=DEL;SVLEN=-280;SVINSLEN=1;SVINSSEQ=G TR:VR 49:20 33:0 chr10 38294738 r_32_0 C C[chr20:23432225[ . Too_low_VAF SVTYPE=BND;MATEID=r_32_1 TR:VR 64:3 60:0 chr20 23432225 r_32_1 A ]chr10:38294738]A . Too_low_VAF SVTYPE=BND;MATEID=r_32_0 TR:VR 64:3 60:0 chr11 82972826 d_353 T . PASS END=82972882;SVTYPE=DEL;SVLEN=-56 TR:VR 21:10 39:0 chr12 63747172 r_67_0 T [chr3:90674941[CTGCAAGTGGATATTCTGACCTCATTGTGGCCATCGTTTGATACGTGATTTCTTCATATAAAACTTGATGGAGGAGTTCTCAGAAACATTTTTGTGATGTGTGCATCCAACTCAGAGAGTTGAAATTTCCTTTTTTTTTA . Too_low_VAF SVTYPE=BND;MATEID=r_67_1;SVINSLEN=139;SVINSSEQ=CTGCAAGTGGATATTCTGACCTCATTGTGGCCATCGTTTGATACGTGATTTCTTCATATAAAACTTGATGGAGGAGTTCTCAGAAACATTTTTGTGATGTGTGCATCCAACTCAGAGAGTTGAAATTTCCTTTTTTTTT TR:VR 251:8 145:1 chr3 90674941 r_67_1 A [chr12:63747172[AAAAAAAAAGGAAATTTCAACTCTCTGAGTTGGATGCACACATCACAAAAATGTTTCTGAGAACTCCTCCATCAAGTTTTATATGAAGAAATCACGTATCAAACGATGGCCACAATGAGGTCAGAATATCCACTTGCAGA . Too_low_VAF SVTYPE=BND;MATEID=r_67_0;SVINSLEN=139;SVINSSEQ=AAAAAAAAAGGAAATTTCAACTCTCTGAGTTGGATGCACACATCACAAAAATGTTTCTGAGAACTCCTCCATCAAGTTTTATATGAAGAAATCACGTATCAAACGATGGCCACAATGAGGTCAGAATATCCACTTGCAG TR:VR 251:8 145:1 chr13 89256163 d_454 G . PASS END=89256803;SVTYPE=DEL;SVLEN=-640 TR:VR 50:14 23:0 chr15 57896654 d_698 T . Too_small_size END=57896698;SVTYPE=DEL;SVLEN=-44 TR:VR 32:16 29:0 chr17 21671258 r_166_0 C [chr17:21986500[ATTCCATACAATTCCATTACATTCCATTCAAATTGATTCCATTACATTCCCTTCCAATCCATTGCATTCCATTCCATTCCATTACATTCCACTCCACTCGGATTGATTCAATTCCATTCTATTCCATTCCATTCCATTCCATTTAATTCCTTTCGATTCCATTGCATTCCATTCCACTTGGGTTGAATTCATTCCACTCCATTCCATTG . Too_low_VAF SVTYPE=BND;MATEID=r_166_1;SVINSLEN=208;SVINSSEQ=ATTCCATACAATTCCATTACATTCCATTCAAATTGATTCCATTACATTCCCTTCCAATCCATTGCATTCCATTCCATTCCATTACATTCCACTCCACTCGGATTGATTCAATTCCATTCTATTCCATTCCATTCCATTCCATTTAATTCCTTTCGATTCCATTGCATTCCATTCCACTTGGGTTGAATTCATTCCACTCCATTCCATT TR:VR 231:10 106:0 chr17 21986500 r_166_1 G [chr17:21671258[AATGGAATGGAGTGGAATGAATTCAACCCAAGTGGAATGGAATGCAATGGAATCGAAAGGAATTAAATGGAATGGAATGGAATGGAATAGAATGGAATTGAATCAATCCGAGTGGAGTGGAATGTAATGGAATGGAATGGAATGCAATGGATTGGAAGGGAATGTAATGGAATCAATTTGAATGGAATGTAATGGAATTGTATGGAATG . Too_low_VAF SVTYPE=BND;MATEID=r_166_0;SVINSLEN=208;SVINSSEQ=AATGGAATGGAGTGGAATGAATTCAACCCAAGTGGAATGGAATGCAATGGAATCGAAAGGAATTAAATGGAATGGAATGGAATGGAATAGAATGGAATTGAATCAATCCGAGTGGAGTGGAATGTAATGGAATGGAATGGAATGCAATGGATTGGAAGGGAATGTAATGGAATCAATTTGAATGGAATGTAATGGAATTGTATGGAAT TR:VR 231:10 106:0 chr17_KI270729v1_random 195253 r_192_0 A A]chr8:39828471] . PASS SVTYPE=BND;MATEID=r_192_1 TR:VR 94:46 51:0 chr8 39828471 r_192_1 T T]chr17_KI270729v1_random:195253] . PASS SVTYPE=BND;MATEID=r_192_0 TR:VR 94:46 51:0 chr20 24911291 d_1099 T . PASS END=24927613;SVTYPE=DEL;SVLEN=-16322 TR:VR 61:7 38:0 chr3 52457759 r_259 A . PASS END=52465596;SVTYPE=DEL;SVLEN=-7837 TR:VR 17:10 22:0 chr8 129317316 i_1194 G . PASS END=129317326;SVTYPE=INS;SVINSLEN=394;SVINSSEQ=CCCTCCTCCCCTCCCCACTCCTCCGCACCCCCTCCCCTCCCTACCTCTCCCCACCCCTCCCCTCCCCCCTCTGCTCCCCGCCCCGCCCCACCCCCTCCCCACCCGTCCCCTCCCCTCCCCTCCCCTCCCCTCCAGTCCCTTCCCCCAGCCGCGGGCGAGGCGAGAAGCGGGAGAGCAAAGCACGGGGCGTAGGGGGAGGGGGAGAAGAGCTGGCGGAGATTCGGGGGAAGGAGGTCGGTTCCGCGGGAGACAGAAAGAAACTGGGAGCCAGGCGGGGGCGGTGGAAGCGCGAGCCCAGAACTGAGCCCGGCGGGGCCGTGCACGGCGAGGCTGCTCGGGGTCCCTGCGCGGACTGGACGGCGGGCAGGAGCCCCGGGCCGGGGGCGGATCCGGC TR:VR 104:6 32:0 chr9 64956529 d_1778 T . PASS END=64956813;SVTYPE=DEL;SVLEN=-284;SVINSLEN=113;SVINSSEQ=GATGTGTGCGTTCATCTCACAGAGTTGAACTTTTCTTTTTATTGAGCCGTTTGAAAACACTGTTTTTGTAGAATCTGCAAGTGGACATTTGTAGCACTTTGGAGCCAATGGTA TR:VR 46:6 29:0 chr1 125146945 i_49 T . Too_low_VAF END=125146945;SVTYPE=INS;SVINSLEN=245;SVINSSEQ=CCATTAACTTCCATTCGATTCAAATGAATTACATTGTAATCCATTTATGATTTCTTATGAAGATTCTATTCCATGATGATTCCATTCCACTGGTCCAGTCCATTCGATTCCATTCCATTTGATTCCATAACATTCTATTGTATTCCATTCGATTCCCTTCATTTGAATAAATTCCATTCAATACCATTCTTTTGAGCCCATTGTATTTGAGTCCATTCCATTCGATTCCATAACATTTGGATCAT TR:VR 140:3 80:0 chr11 11221711 r_43_0 T [chr5:108648829[T . PASS SVTYPE=BND;MATEID=r_43_1 TR:VR 52:5 45:0 chr5 108648829 r_43_1 T [chr11:11221711[T . PASS SVTYPE=BND;MATEID=r_43_0 TR:VR 52:5 45:0 chr12 65425003 r_68_0 T [chr12:65429938[AAATATATATATATTTAGGTCCTCTGGTTTTGGTTTTTTATATAA . PASS SVTYPE=BND;MATEID=r_68_1;SVINSLEN=44;SVINSSEQ=AAATATATATATATTTAGGTCCTCTGGTTTTGGTTTTTTATATA TR:VR 53:22 41:0 chr12 65429938 r_68_1 A [chr12:65425003[TATATAAAAAACCAAAACCAGAGGACCTAAATATATATATATTTA . PASS SVTYPE=BND;MATEID=r_68_0;SVINSLEN=44;SVINSSEQ=TATATAAAAAACCAAAACCAGAGGACCTAAATATATATATATTT TR:VR 53:22 41:0 chr13 112299342 i_294 T . Too_low_VAF END=112299342;SVTYPE=INS;SVINSLEN=137;SVINSSEQ=GGACCATTCCTTCAGAATACAGCCAGGTAAGCATGGAGTGTTTCTTCAAGATGGGCCCAGGTAATCATGGACCATTCCTTCAGGATGGAGTCACATAAGTGTGGACCATTCCTTCAGGATGGAATCAGGTAGGCAGG TR:VR 70:3 34:0 chr13 89758549 d_455 A . PASS END=89758600;SVTYPE=DEL;SVLEN=-51 TR:VR 42:19 30:0 chr14 57344452 d_521 G . PASS END=57345269;SVTYPE=DEL;SVLEN=-817 TR:VR 34:4 31:0 chr17 21671258 r_167_0 C ]chr17_KI270729v1_random:746]TATTCCATTCCATTCCATTCCATTTAATTCCTTTCGATTCCATTGCATTCCATTCCACTTGGGTTGAATTCATTCCACTCCATTCCATTC . PASS SVTYPE=BND;MATEID=r_167_1;SVINSLEN=89;SVINSSEQ=TATTCCATTCCATTCCATTCCATTTAATTCCTTTCGATTCCATTGCATTCCATTCCACTTGGGTTGAATTCATTCCACTCCATTCCATT TR:VR 436:24 260:0 chr17_KI270729v1_random 746 r_167_1 C CAATGGAATGGAGTGGAATGAATTCAACCCAAGTGGAATGGAATGCAATGGAATCGAAAGGAATTAAATGGAATGGAATGGAATGGAATA[chr17:21671258[ . PASS SVTYPE=BND;MATEID=r_167_0;SVINSLEN=89;SVINSSEQ=AATGGAATGGAGTGGAATGAATTCAACCCAAGTGGAATGGAATGCAATGGAATCGAAAGGAATTAAATGGAATGGAATGGAATGGAATA TR:VR 436:24 260:0 chr17 71705158 d_849 G . Too_small_size END=71705197;SVTYPE=DEL;SVLEN=-39 TR:VR 45:12 24:0 chr2 172482459 d_1073 A . PASS END=172482510;SVTYPE=DEL;SVLEN=-51 TR:VR 36:16 26:0 chr2 79728773 r_205 C . PASS END=79753447;SVTYPE=DUP;SVLEN=24674 TR:VR 67:5 51:0 chr4 158630348 d_1431 C . PASS END=158630449;SVTYPE=DEL;SVLEN=-101 TR:VR 42:20 31:0 chr4 97122824 d_1421 A . PASS END=97123568;SVTYPE=DEL;SVLEN=-744 TR:VR 40:14 27:0 chr8 77869354 i_1180 T . PASS END=77869354;SVTYPE=INS;SVINSLEN=763;SVINSSEQ=TAAAAAGTCAGGACTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTCTTAATGATTGCCATTCTAAGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACAAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAT TR:VR 97:7 33:0 chrX 134234012 r_387_0 A ATG]chrX:134239284] . PASS SVTYPE=BND;MATEID=r_387_1;SVINSLEN=2;SVINSSEQ=TG TR:VR 41:9 39:0 chrX 134239284 r_387_1 A ACA]chrX:134234012] . PASS SVTYPE=BND;MATEID=r_387_0;SVINSLEN=2;SVINSSEQ=CA TR:VR 41:9 39:0 chr1 204955446 r_22_0 T [chr6:8109491[C . PASS SVTYPE=BND;MATEID=r_22_1 TR:VR 90:19 55:0 chr6 8109491 r_22_1 C [chr1:204955446[C . PASS SVTYPE=BND;MATEID=r_22_0 TR:VR 90:19 55:0 chr1 88506825 i_36 G . PASS END=88506825;SVTYPE=INS;SVINSLEN=2013;SVINSSEQ=CGGGCTGGGGTCGGTGGCTTAGGGAGCCCGTCCGGCCATGGTGGCCGCGGCTGGTGGTTGGCGCGGCTGCGCTGCGGCCCGGGGCAGTGCGGAGCCAGGACAGTCGCGGCGCTGACGCCCGCGGGCCCCAGCTGCAGATATGAAGCGGAGCCGCTGCCGCGACCGACCGCAGCCGCCGCCGCCCGACCGCCGGGAGGATGGAGTTCAGCGGGCAGCGGAGCTGTCTCAGTCTTTGCCGCCGCGCTGGCGAGCGCCGCCCGGGAGGCAGCGGCTGGAGGAGCGGACGGGCCCCGCGGGGCCCGAGGGCAGAGAGCAGCCGCCTGCCTTGGCCTCCCAAAGTGCCGAGATTGCAGCCTCTGCCCGGCTGCCACCCCGTCTGGGAAGTGAGGAGTGTCTCTGCCTGGCCGCCCATGGTCTGGGATGTGAGGAGCCCCTCTGCCTGGCTGCCCAGTCTGGAAAGTGAGGAGCGTCTCCGCCCGGCCGCCATCCCATCTAGGAAGTGAGGAGCGCCTCTTCCCAGCCGCCATCACATCTAGGAAGTGAGGAGCGTCTCTGCCCGGCCGCCCATCGTCTGAGATGTGGGGAGCGCCTCTGCCCCGCCGCCCCATCTGGGATGTGAGGAGCGCCTCTGCCCGGCCGAGACCCCGTCTGGGAGGTGAGGAGCGTCTCTGCCCGGCCGCCCCGTCTGAGAAGTGAGGAGACCCTCTGCCTGGCAACCACCCCGTCTGAGAAGTGAGGAGCCCCTCTGCCCGGCAGCTGCCCCGTCTGAGAAGTAAGGAGCCTCTCCGCCCGGCAGCCACCCCATCTGGGAAGTGAGGAGCGTCTCCGCCCGGCAGCCACCCCGTCCGGGAGGGAGGTGGGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCATCCGGGAGGGAGGTGGGGGGTCAGCCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCGGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCGGCCCCCCACCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCGGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCGGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGGTCGGCCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGAAGCCCCTCAGCCCGGCCAGCCACCCCGTCCGGGAGGGAGATGGGGGGGTCAGTCCCCCCACCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTAGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCTGTCCGGGAGGGAGGTGGGGGGGTCAGCCCTCCGCCCGGCCAGCCGCCCCGTCTGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCGGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCGGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCGGCCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCACCACCCCGTCTGGGAGGTGTGCCCAACAGCTCATTGAGAACGGGCCAGGATGACAATGGCGGCTTTGTGGAATAGAAAGGCGGGAAAGGTGGGGAAAAGATTGAGAAATCGGATGGTTGCCGTGTCTGTGTAGAAAGAAGTAGACATGGGAGACTTTTCATTTTGTTCTGCACT TR:VR 36:9 31:0 chr13 93049849 d_456 G . Too_small_size END=93049885;SVTYPE=DEL;SVLEN=-36;SVINSLEN=1;SVINSSEQ=T TR:VR 56:12 25:0 chr14_GL000225v1_random 16760 i_340 A . Too_low_VAF END=16761;SVTYPE=INS;SVINSLEN=727;SVINSSEQ=CCGAGCGCTCCCTGGCTCCTGGAGCTCCTGGGAATGCGCCAGGATGCCTTGCGTCTGCCCTGCCGCGTGGGGACCTCCAGTGTCACGGGCTGGCGAGTTGGAGCTGCCCCGGCTTCCAGGATTCATCAGGGTCTGGTTTCCCACGCCGCCCCGGCGACCTCAGTACCGGCCCCAGCCCCACCACGGACTACTCTGGGACGTGGGTGGTGCAAGCACTCCCCTGGCTCTGTGGCCCCGCTTGAGCGGTCGTATACTGTCCCACCACGTGATGGCCTGGCAGGCCGTCGCGCTGTGGGTCCCAATCCTCCTGGCTTTTGCCCGGGCGCGGAGGCCACCGAGGAGCCTGAGGGTGGGAGATCATCCTTCCGGAGCAGCCAGGGGTGGCTTAGCCAGAAAAATCCTCGTGTGCCAGGGCAGGTTGGGATATCCCCTCTGCCGGCACGGTGGCCCTGGCTGGGCTGGAGTACGCGGGACGACCCTCACTCCCTGGCTCACGAAAGCCCCCTGTGGGAGAGCCCCAGGCGCACAGGGCACGTGGGGTGCAAGAAGCCCCGTTCCCCACGCGCCGGTGTGGGCGAAGGTGACCCACGAGGGAGGAGAGTGACACCCTCCAGGGCCCACGATGCACAGGCTGCCTGCCTGCGCTTGCGCCCTGCCAGCCTGTCCCGGGTGCCTGGCCCTTGATTCTGGAAACCAGATCTGAATCCTGGACTCCGGGAGGCAGTAA TR:VR 265:4 229:1 chr15 61020189 r_147 C . PASS END=69784666;SVTYPE=DUP;SVLEN=8764477 TR:VR 69:10 55:0 chr17 21671258 r_170_0 C ]chr17_KI270729v1_random:5939]ATTCCATTTAATTCCTTTCGATTCCATTGCATTCCATTCCACTTGGGTTGAATTCATTCCACTCCATTCCATTC . PASS SVTYPE=BND;MATEID=r_170_1;SVINSLEN=73;SVINSSEQ=ATTCCATTTAATTCCTTTCGATTCCATTGCATTCCATTCCACTTGGGTTGAATTCATTCCACTCCATTCCATT TR:VR 432:28 262:0 chr17_KI270729v1_random 5939 r_170_1 C CAATGGAATGGAGTGGAATGAATTCAACCCAAGTGGAATGGAATGCAATGGAATCGAAAGGAATTAAATGGAAT[chr17:21671258[ . PASS SVTYPE=BND;MATEID=r_170_0;SVINSLEN=73;SVINSSEQ=AATGGAATGGAGTGGAATGAATTCAACCCAAGTGGAATGGAATGCAATGGAATCGAAAGGAATTAAATGGAAT TR:VR 432:28 262:0 chr2 173491372 d_1074 A . PASS END=173491437;SVTYPE=DEL;SVLEN=-65 TR:VR 25:12 33:0 chr2 7980755 d_973 A . PASS END=7980805;SVTYPE=DEL;SVLEN=-50 TR:VR 36:6 30:0 chr4 162331476 d_1432 G . PASS END=162332928;SVTYPE=DEL;SVLEN=-1452 TR:VR 40:4 27:0 chr7 120671897 r_331 T . PASS END=120753674;SVTYPE=DUP;SVLEN=81777 TR:VR 114:13 56:0 chr7 158360071 d_1658 C . PASS END=158360045;SVTYPE=INS;SVINSLEN=115;SVINSSEQ=CCACATCCACCCTCACCCAGGACGACGCACAGACCCCACGTTCCACCCTCACCCAGGACGACGCACAGACCCCACATCCACCCTCACCCAGGACGACGCACAGACCCCACATCCA TR:VR 47:7 18:0 chr7 63001736 d_1609 T . PASS END=63002013;SVTYPE=DEL;SVLEN=-277 TR:VR 48:9 33:0 chr8 38726992 d_1679 G . PASS END=38727233;SVTYPE=DEL;SVLEN=-241 TR:VR 25:16 26:0 chrX 134237289 r_388_0 G [chrX:134239281[C . PASS SVTYPE=BND;MATEID=r_388_1 TR:VR 39:10 32:0 chrX 134239281 r_388_1 C [chrX:134237289[C . PASS SVTYPE=BND;MATEID=r_388_0 TR:VR 39:10 32:0 chr13 93203563 r_87 C . PASS END=93335715;SVTYPE=DUP;SVLEN=132152 TR:VR 143:28 58:0 chr15 63391553 r_148_0 C C[chr20:55518270[ . PASS SVTYPE=BND;MATEID=r_148_1 TR:VR 97:5 56:0 chr20 55518270 r_148_1 C ]chr15:63391553]C . PASS SVTYPE=BND;MATEID=r_148_0 TR:VR 97:5 56:0 chr17 21671260 r_168_0 T ]chr17_KI270729v1_random:4245]C . Too_low_VAF SVTYPE=BND;MATEID=r_168_1 TR:VR 440:20 273:0 chr17_KI270729v1_random 4245 r_168_1 C C[chr17:21671260[ . Too_low_VAF SVTYPE=BND;MATEID=r_168_0 TR:VR 440:20 273:0 chr18 80228373 r_197 C . PASS END=80237104;SVTYPE=DEL;SVLEN=-8731 TR:VR 44:20 47:0 chr2 177877618 d_1075 G . PASS END=177877690;SVTYPE=DEL;SVLEN=-72 TR:VR 23:11 28:0 chr2 80019003 r_206 A . PASS END=80068839;SVTYPE=DEL;SVLEN=-49836 TR:VR 62:10 56:0 chr20 36022981 d_1142 A . PASS END=36024109;SVTYPE=DEL;SVLEN=-1128 TR:VR 58:7 31:0 chr20 70367 d_1092 A . PASS END=70457;SVTYPE=DEL;SVLEN=-90 TR:VR 46:18 31:0 chr3 57861942 r_260 A . PASS END=57915630;SVTYPE=DEL;SVLEN=-53688 TR:VR 28:12 46:0 chr5 59102301 d_1474 G . PASS END=59112995;SVTYPE=DEL;SVLEN=-10694 TR:VR 43:7 40:0 chr7 6364715 d_1585 A . PASS END=6376222;SVTYPE=DEL;SVLEN=-11507 TR:VR 56:6 35:0 chr8 130276728 i_1196 A . Too_small_size;Too_low_VAF END=130276728;SVTYPE=INS;SVINSLEN=37;SVINSSEQ=CACACACACACACTCTCTCTCTCTCTCTCTCTCTCTC TR:VR 110:4 33:0 chr8 80227212 d_1716 C . Too_low_VAF END=80227366;SVTYPE=DEL;SVLEN=-154 TR:VR 110:3 33:0 chrX 138862737 d_1930 T . PASS END=138863127;SVTYPE=DEL;SVLEN=-390 TR:VR 37:7 37:0 chr11 116773525 d_355 A . PASS END=116780310;SVTYPE=DEL;SVLEN=-6785 TR:VR 33:12 26:0 chr11 9792291 d_328 T . PASS END=9792360;SVTYPE=DEL;SVLEN=-69 TR:VR 36:11 31:0 chr13 93373702 d_457 T . PASS END=93378041;SVTYPE=DEL;SVLEN=-4339 TR:VR 58:7 29:0 chr14 63122733 r_100_0 C C[chr7:42490265[ . PASS SVTYPE=BND;MATEID=r_100_1 TR:VR 74:5 64:0 chr7 42490265 r_100_1 T ]chr14:63122733]T . PASS SVTYPE=BND;MATEID=r_100_0 TR:VR 74:5 64:0 chr17 21671258 r_169_0 C ]chr17_KI270729v1_random:5933]CATTCCACTTGGGTTGAATTCATTCCACTCCATTCCATTC . Too_low_VAF SVTYPE=BND;MATEID=r_169_1;SVINSLEN=39;SVINSSEQ=CATTCCACTTGGGTTGAATTCATTCCACTCCATTCCATT TR:VR 449:17 263:0 chr17_KI270729v1_random 5933 r_169_1 C CAATGGAATGGAGTGGAATGAATTCAACCCAAGTGGAATG[chr17:21671258[ . Too_low_VAF SVTYPE=BND;MATEID=r_169_0;SVINSLEN=39;SVINSSEQ=AATGGAATGGAGTGGAATGAATTCAACCCAAGTGGAATG TR:VR 449:17 263:0 chr2 189399450 d_1076 C . Too_small_size END=189399485;SVTYPE=DEL;SVLEN=-35 TR:VR 44:16 22:0 chr2 80071959 r_207 A . PASS END=80094790;SVTYPE=DEL;SVLEN=-22831 TR:VR 53:8 47:0 chr3 78918574 d_1291 T . PASS END=78919019;SVTYPE=DEL;SVLEN=-445 TR:VR 37:6 30:0 chr4 164219417 r_287 C . PASS END=164253860;SVTYPE=DEL;SVLEN=-34443 TR:VR 47:7 63:0 chr5 62353274 d_1475 G . PASS END=62360278;SVTYPE=DEL;SVLEN=-7004 TR:VR 39:6 28:0 chr8 807166 d_1669 T . PASS END=807222;SVTYPE=DEL;SVLEN=-56 TR:VR 23:18 36:0 chrX 139035058 d_1931 A . PASS END=139035504;SVTYPE=DEL;SVLEN=-446 TR:VR 33:8 44:0 chr11 12027653 d_332 A . PASS END=12027701;SVTYPE=DEL;SVLEN=-48;SVINSLEN=3;SVINSSEQ=CCA TR:VR 45:10 37:0 chr15 64185804 r_150_0 G G]chr15:76049925] . PASS SVTYPE=BND;MATEID=r_150_1 TR:VR 86:7 67:0 chr15 76049925 r_150_1 A A]chr15:64185804] . PASS SVTYPE=BND;MATEID=r_150_0 TR:VR 86:7 67:0 chr17 21760797 r_172_0 T ]chr8:32378981]AG . PASS SVTYPE=BND;MATEID=r_172_1;SVINSLEN=1;SVINSSEQ=A TR:VR 130:62 72:0 chr8 32378981 r_172_1 G GT[chr17:21760797[ . PASS SVTYPE=BND;MATEID=r_172_0;SVINSLEN=1;SVINSSEQ=T TR:VR 130:62 72:0 chr17 75781082 d_850 C . PASS END=75799698;SVTYPE=DEL;SVLEN=-18616 TR:VR 59:5 39:0 chr2 192323490 d_1077 G . PASS END=192324407;SVTYPE=DEL;SVLEN=-917 TR:VR 35:10 40:0 chr2 81221694 d_986 T . PASS END=81221747;SVTYPE=DEL;SVLEN=-53 TR:VR 41:11 38:0 chr20 36331862 d_1143 C . Too_small_size END=36331906;SVTYPE=DEL;SVLEN=-44 TR:VR 50:5 25:0 chr3 175476485 d_1346 G . PASS END=175477161;SVTYPE=DEL;SVLEN=-676 TR:VR 40:10 19:0 chr4 166296671 d_1433 C . Too_small_size END=166296711;SVTYPE=DEL;SVLEN=-40 TR:VR 23:8 34:0 chr5 62483652 d_1476 T . PASS END=62483732;SVTYPE=DEL;SVLEN=-80 TR:VR 37:6 24:0 chr7 66217370 d_1610 T . PASS END=66219496;SVTYPE=DEL;SVLEN=-2126 TR:VR 34:5 37:0 chr8 807165 d_1670 C . PASS END=807253;SVTYPE=DEL;SVLEN=-88 TR:VR 23:18 36:0 chrX 38738968 d_1898 T . PASS END=38739062;SVTYPE=DEL;SVLEN=-94 TR:VR 62:12 39:0 chr14 65959020 r_101 T . PASS END=93572944;SVTYPE=DEL;SVLEN=-27613924 TR:VR 57:5 50:0 chr15 64338360 r_151 A . PASS END=65631875;SVTYPE=DUP;SVLEN=1293515 TR:VR 67:15 57:0 chr17 21837999 r_173_0 A AC]chr8:31312615] . PASS SVTYPE=BND;MATEID=r_173_1;SVINSLEN=1;SVINSSEQ=C TR:VR 222:16 73:0 chr8 31312615 r_173_1 A AG]chr17:21837999] . PASS SVTYPE=BND;MATEID=r_173_0;SVINSLEN=1;SVINSSEQ=G TR:VR 222:16 73:0 chr19 56744785 i_608 G . PASS END=56744827;SVTYPE=INS;SVINSLEN=2551;SVINSSEQ=CACAGACAATGGTGTCTGGTAGAATAAATGAGTCTTCAATAGCAGCAAAAGAAATGCGTCGTGAGCTCAGACCAGTAATCCAAGCGACTTAGAGAGGCTGAAAGCTAAAGAAACACATTACCAGAGGAACAGGTTACCCACAGAATGGGAGAAATTTTTTGCCAATGCCACTGCACTCCAGCCAGAGTGACACAGAGCGACTCCGTCTCAACGGGAGAAAGATTCTTTGCAATGGCCAAAGAAACTACCGCCAGAGAAACAGGTAGAACCCACAGAACATAGGGAAACTCATAATTTGGGATTATAAGCAAAAGAAAGTCAAACTGTCAGAAGAACAGGCGATTCCAGGAGACAGAGGGAGGCAAATTATTTGGCATGAAGCAAAAGAAACTATCGTCAGAGTGAACAGCCCCAGACCCACAGAATGTGGAGGAAATTTTTGCCATCACTGGCCTTCAAGTGGTGCCTTCCTGTCTCCATTCAGGACTCTGACCAGAGGAGTCACCTCTCAGGATGCCTTCTTTGATTCCTGTCCCCAGAAGCTTGTCATGCACCTCTACCCTTCCACCCACCATGGGGTTGATTTTTTTTATTTATTTCATATGTATAAAAAAACAGGATACACGTGCAGAATGTGCCAGTTTGTTACATAGGCCATCACTTGTGCCATGGTGGTTTGCAAGCACCTAGAAAACCATCCTCTAGACCCTCCCCTCACCGCCTACCCACCAACAGGCTCTGGTGTGTGTTGTTCCCCTCTCTGTGTCCATGTGTGCTCATTGCTGAACTCCCACTTATGAGTGAGAATATGTGGTGTTTGGTTTTCTGTTCCTGTGTTAGTTTGCTGAGGATGATGGCTTCCAGCTTCATCCATGTCCCTGCAAAGGACATGATTTCATTCCTTTTTTTTTTTGGCTGCACAGTAGTCCATGATGTATATGTACCACATTTTCTTTATCTAGTCTATCATTGATAGGCATTTGGGTTGGTTCCATGCCTTTGCTATTGTAAATAGTGCTGTGATAAACATACGTGTGCATGTGTCTTTATAGCAGAATGATTTATATTCCTTTGGGTACATACCCAGTAATGGGATTGCTGGGTCAAATGGTATTTCTGGTTCTAGATCCTTGAGGAATCACCATACCGTCAGAGTGAACTAATTTACATTCCCACCAACAGGCACACCCACCAGAATGGGAGGAAATTTTTGCAAAGCAAAAAGAACAAATGGAGGCATCACGCCACCCGTACAGAGTGAACCAGGCGACCCACAGACCAATGGGGAGGAAATCTTTTGCAAGCAAAAGAAACCATTCGTCAGAGCCAGCAGGCGACCTTCCTTACAGACTCAAGGTGGAGGAAGATTTTTGTGAAACTGAAAACCATAAAAAAAAGAAACTATCGTCAGAGTGACAAAGGCGACCCACAGAATGGGAGGAAATTTTCTGCAAGCAAAAGAAACCATCAAAGTCAGAGTGAACAGGCGACCCACAGAATGGGAGGAAATTTTTGCAAGCAAAAGAAACCATCGTCAGAGTGAACAGGCGACCCACAGATAGGAGAAAATTTTGCAAGCAAAAGAAACCATCGTCAGAGTGAACAGGCTACCCACAGAATGGGAGGAAATTTTTGCAAGCAAAAAGAAACTATCGTCAGAGTGAACAGGCGACCCACAGAATGGGAGAAAATTTTTGCAAGCAAAAGAAACCATCGTCAGAGTGAACAGGCGACCCACAGAATGGGAGAAATTTTTTGCAAGCAAAAGAAACTATCGTCAGAGTGAACAGGCGACCCACAGAATGGGAGAAAATTTTTGCAAGCAAAAGAAACCATCGTCAGAGTGAACAGGCGACCCACAGAATGGGAGGAAATTTTTGCAAGCAAAAGAAACTATCGTCAGAGTGAACAGGCGATCCACAGAATGGGAGGAAATTTTTGCAAGCAAAAGAAACCATCGTCAGAGTGAACAGGCGACCCACAGAATGGGAGGAAATTTTTGCAAGCCAAAGAAACCATCGTCAGAGTGAACAGGCGACCCACAGAATGGGAGGAAATTTTTGCAAGCCAAAGAAACCATCGTCAGAGTGAACAGGCGACCCACAGAATGGGAGAAAATTTTTGCAAGCCAAAGAAACTATCGTCAGAGTGAACAGGCGACCCACAGAATGGGAGAAAATTTTTGCAAGCCAAAAGAAACCATCGTCAGAGTGAACAGGCGACCCACAGAATGGGAGGAAATTTTTGCAAGCAAAAGAAACTATCGTCAGAGTGAACAGGCGACCCACAGAATGGGAGGAAATTTTTGCAAGCAAAAGAAACCATCGTCAGAGTGAACAGGCGACCCACAGAATGGGAGGAAATTTTTGCAAGCCAAAGAAACTATCGTCAGAGTGAACAGGCGACCCACAGAATGGGAGGAAATTTTTGCAAGCAAAAGAAACCATCGTCAGAGTGAACAGGCGACCCACAGAATGGGAGGAAATTTTTGCAAGCAAAAGAAACTATCGTCAGAGTGAACAGGCGACCCACAGAATGGGAGGAAATTTTT TR:VR 33:5 28:0 chr2 192483101 d_1078 T . PASS END=192484314;SVTYPE=DEL;SVLEN=-1213 TR:VR 38:11 29:0 chr5 179577102 d_1502 C . PASS END=179577177;SVTYPE=DEL;SVLEN=-75 TR:VR 68:16 18:0 chr7 69341610 d_1611 T . PASS END=69341849;SVTYPE=DEL;SVLEN=-239 TR:VR 42:9 31:0 chr8 131845118 r_365 A . PASS END=131878700;SVTYPE=DEL;SVLEN=-33582 TR:VR 120:13 60:0 chr8 41565436 d_1681 A . Too_low_VAF END=41565654;SVTYPE=DEL;SVLEN=-218 TR:VR 65:3 20:0 chr9 6828259 d_1767 T . PASS END=6834504;SVTYPE=DEL;SVLEN=-6245 TR:VR 25:6 36:0 chrX 142491451 d_1932 T . PASS END=142491520;SVTYPE=DEL;SVLEN=-69 TR:VR 27:6 24:0 chrX 4088558 d_1882 C . PASS END=4088661;SVTYPE=DEL;SVLEN=-103 TR:VR 43:13 32:0 chr13 113132181 d_486 G . PASS END=113133285;SVTYPE=DEL;SVLEN=-1104 TR:VR 56:15 25:0 chr13 97759494 r_88_0 C ]chr4:166487017]CACAGCTGAAGA . PASS SVTYPE=BND;MATEID=r_88_1;SVINSLEN=11;SVINSSEQ=CACAGCTGAAG TR:VR 83:15 68:0 chr4 166487017 r_88_1 A ACTTCAGCTGTG[chr13:97759494[ . PASS SVTYPE=BND;MATEID=r_88_0;SVINSLEN=11;SVINSSEQ=CTTCAGCTGTG TR:VR 83:15 68:0 chr14 70980841 r_102 G . PASS END=70986964;SVTYPE=DEL;SVLEN=-6123 TR:VR 21:16 39:0 chr15 64487766 d_700 G . PASS END=64487915;SVTYPE=DEL;SVLEN=-149 TR:VR 36:6 25:0 chr17 78158395 d_851 T . PASS END=78158541;SVTYPE=DEL;SVLEN=-146 TR:VR 45:7 24:0 chr2 197873544 d_1079 C . PASS END=197875251;SVTYPE=DEL;SVLEN=-1707 TR:VR 36:8 26:0 chr5 179577102 d_1503 C . PASS END=179580245;SVTYPE=DEL;SVLEN=-3143 TR:VR 73:10 19:0 chr7 70245511 r_324 T . PASS END=70328126;SVTYPE=DUP;SVLEN=82615 TR:VR 78:4 69:0 chr8 132116818 d_1743 C . PASS END=132116956;SVTYPE=DEL;SVLEN=-138;SVINSLEN=2;SVINSSEQ=CT TR:VR 64:26 23:0 chr8 42896723 d_1682 T . Too_small_size END=42896768;SVTYPE=DEL;SVLEN=-45 TR:VR 65:13 24:0 chrX 42863885 r_382 G . PASS END=42891982;SVTYPE=DEL;SVLEN=-28097 TR:VR 47:15 57:0 chr13 113161967 d_487 T . PASS END=113162227;SVTYPE=DEL;SVLEN=-260;SVINSLEN=6;SVINSSEQ=CCTCAT TR:VR 57:6 21:0 chr13 98333967 d_458 C . PASS END=98334083;SVTYPE=DEL;SVLEN=-116 TR:VR 57:23 25:0 chr15 69654031 r_152 T . PASS END=70458003;SVTYPE=DUP;SVLEN=803972 TR:VR 62:6 41:0 chr17 78161098 r_189 A . PASS END=78185190;SVTYPE=DEL;SVLEN=-24092 TR:VR 63:7 46:0 chr2 203097942 r_213 T . PASS END=203109606;SVTYPE=DEL;SVLEN=-11664 TR:VR 46:13 31:0 chr3 181595510 d_1348 T . PASS END=181599372;SVTYPE=DEL;SVLEN=-3862 TR:VR 58:22 21:0 chr5 179580329 d_1504 G . PASS END=179595638;SVTYPE=DEL;SVLEN=-15309 TR:VR 92:9 27:0 chr8 133658796 d_1744 G . PASS END=133659387;SVTYPE=DEL;SVLEN=-591;SVINSLEN=16;SVINSSEQ=AAATGAAAACTCCAAG TR:VR 68:4 26:0 chrX 14720543 d_1884 C . PASS END=14720601;SVTYPE=DEL;SVLEN=-58 TR:VR 41:5 44:0 chrX 42874034 r_383 T . PASS END=42898887;SVTYPE=DEL;SVLEN=-24853 TR:VR 38:12 48:0 chr10 42096793 i_139 A . Too_low_VAF END=42096793;SVTYPE=INS;SVINSLEN=392;SVINSSEQ=TCATCGAATGGAATCGAATGGAATCATCATCGAATGGAATCGAATGGAATCATCGAATGGAATCGAATGGAATCATCATCAAATGGAAACGAATGGAATTATCTAATGGAATCGAATGGAATCATCATCGAATGGACTCGAATGGAATCATCATCGAATGGAATCGAATGGAATAATCATCGAATGGACTCGAATGGAATTATCATCAAATGGAATCGAATGGAATCATCATCGAATGGAATCGAATGGAATCATCAAATGGAATCATCGAATGGATGGAATCATCATCAAATGGAATCGAATAGAATTATGGAATGAAATCCAATGTGATCATCATTGAATGGACTCGAATGGAATCATCATCCAATGGAAACTAATGGAATCAACATCGA TR:VR 327:3 186:1 chr12 105494421 d_406 A . PASS END=105498187;SVTYPE=DEL;SVLEN=-3766 TR:VR 49:12 29:0 chr13 98401659 r_89_0 A A[chrX:102591911[ . PASS SVTYPE=BND;MATEID=r_89_1 TR:VR 98:8 54:0 chrX 102591911 r_89_1 A ]chr13:98401659]A . PASS SVTYPE=BND;MATEID=r_89_0 TR:VR 98:8 54:0 chr17 21846211 r_174_0 T TACTTAAATATT[chr17_KI270730v1_random:2985[ . Too_low_VAF SVTYPE=BND;MATEID=r_174_1;SVINSLEN=11;SVINSSEQ=ACTTAAATATT TR:VR 154:3 52:0 chr17_KI270730v1_random 2985 r_174_1 G ]chr17:21846211]AATATTTAAGTG . Too_low_VAF SVTYPE=BND;MATEID=r_174_0;SVINSLEN=11;SVINSSEQ=AATATTTAAGT TR:VR 154:3 52:0 chr17 80400096 r_190 A . PASS END=80753122;SVTYPE=DEL;SVLEN=-353026 TR:VR 76:7 53:0 chr20 38356407 i_756 A . PASS END=38356407;SVTYPE=INS;SVINSLEN=607;SVINSSEQ=CACACACCCCCACACACACACCACACCTATACACACACTACACACACATCCTACACACACACACCCCACACACCACCCCATACACACACACACCCCCCTCACACACCACACCCCCACACACTCCCCACACACACACCCACACACACCACACACCCCACACACACACCCACACACACACACACACCCCCCACACACCACCCACCACACACACTCCCCCCACACACACCCACACAACACCCCACACACTACACACACTCTACACACACCACACACCACACCCACACACCCCACACACACCACACCACACACACACCCCCACACCCCCCACACACACCCCACACACACTCACCTTCACACACCACACCCACACTACACACACACACCCCACGCACCCACACACCCCACACACCCCCCACACACCCACCCACACACACACCCACACACACACACAAACACACACACCTACACACACACACCACACACACACACCACCCACACACCACACACACACCCACCCACACACCACACACCACACACCACACACACCCACACACACCACCCACACACACACACACACCCCTCACACACACATCCCCACACACACCCC TR:VR 50:3 30:0 chr8 43239899 i_1160 T . Too_low_VAF END=43239899;SVTYPE=INS;SVINSLEN=343;SVINSSEQ=TATATACTGTACATAACATATCAAAGTACACCAAATATATATTATATATATACATAAAAATATCAAAGCATACAGAAATATATATTATATATAATACATAAAATATCAAAGTACACCAAATATGTGTTTTATACTGTACATAAAATATCAGTGTCCACCAAATACATATTATATACTGTACATAATATATCAAAGTACATATATAATATATATTACACCACTGTACATAAAATATCAAATAATATCATAATACATATTATATGTTAACATAATATATCAAAGTACCACGATATATATTATATACTGTACATAAAATATCAAAGTACACAAAATACATATTATA TR:VR 228:3 314:1 chrX 43675357 d_1899 A . Too_small_size END=43675395;SVTYPE=DEL;SVLEN=-38 TR:VR 39:6 32:0 chr1 1294065 d_5 G . PASS END=1295668;SVTYPE=DEL;SVLEN=-1603 TR:VR 33:8 16:0 chr11 130090257 r_53_0 T [chr8:108123694[A . Too_low_VAF SVTYPE=BND;MATEID=r_53_1 TR:VR 197:4 68:1 chr8 108123694 r_53_1 A [chr11:130090257[A . Too_low_VAF SVTYPE=BND;MATEID=r_53_0 TR:VR 197:4 68:1 chr13 98401685 r_90_0 G ]chrX:102579387]T . Too_low_VAF SVTYPE=BND;MATEID=r_90_1 TR:VR 100:4 55:0 chrX 102579387 r_90_1 T T[chr13:98401685[ . Too_low_VAF SVTYPE=BND;MATEID=r_90_0 TR:VR 100:4 55:0 chr14 71068707 d_527 A . PASS END=71068764;SVTYPE=DEL;SVLEN=-57 TR:VR 28:10 29:0 chr15 70452673 d_701 A . PASS END=70455455;SVTYPE=DEL;SVLEN=-2782 TR:VR 43:16 30:0 chr16 36041524 d_735 A . PASS END=36041634;SVTYPE=INS;SVINSLEN=280;SVINSSEQ=CCTTTCTTTTGATTGAGCAGTTTTTAAACAGTCTTTTTGTAAAATCTGCAAGTGGATATTTGGAACCCTTTGAGACCTATTGGGAAAAGGAAATATATTCACATAAAAACTAGACAGAAGCATTCTCAGAAACTTCTATGTGATGTGTGCATTCATCTCACGGAGTTGAACATTTCTTTTGATTGAACAGTTTTGAAACACTATTTTTGTGGAATCTGCAAGTGGATAGTTGGATAGCATTGTGGTCTAATGTGGAAAAGGAAATATCTTCATATAAAAA TR:VR 39:15 22:0 chr17 80788177 d_852 A . PASS END=80788249;SVTYPE=DEL;SVLEN=-72 TR:VR 32:3 19:0 chr2 203369714 r_214_0 G G]chr3:74428238] . PASS SVTYPE=BND;MATEID=r_214_1 TR:VR 63:16 48:0 chr3 74428238 r_214_1 T T]chr2:203369714] . PASS SVTYPE=BND;MATEID=r_214_0 TR:VR 63:16 48:0 chr20 43347461 d_1145 A . PASS END=43351757;SVTYPE=DEL;SVLEN=-4296 TR:VR 73:7 31:0 chr22 26365534 d_1241 C . PASS END=26365890;SVTYPE=DEL;SVLEN=-356 TR:VR 47:7 18:0 chr4 189281887 r_288 T . PASS END=189282424;SVTYPE=DEL;SVLEN=-537 TR:VR 28:5 41:0 chr5 107083121 r_297_0 T T[chr8:51847379[ . Too_low_VAF SVTYPE=BND;MATEID=r_297_1 TR:VR 104:3 65:0 chr8 51847379 r_297_1 C ]chr5:107083121]C . Too_low_VAF SVTYPE=BND;MATEID=r_297_0 TR:VR 104:3 65:0 chrX 148105781 r_389 T . PASS END=148133288;SVTYPE=DEL;SVLEN=-27507 TR:VR 52:21 73:0 chrX 4547887 r_380 G . PASS END=4602318;SVTYPE=DUP;SVLEN=54431 TR:VR 86:8 61:0 chr1 92298953 d_28 C . PASS END=92299340;SVTYPE=DEL;SVLEN=-387 TR:VR 48:7 24:0 chr11 130092733 r_54_0 G GAGGGAGAGC]chr8:108123708] . Too_low_VAF SVTYPE=BND;MATEID=r_54_1;SVINSLEN=9;SVINSSEQ=AGGGAGAGC TR:VR 197:3 70:0 chr8 108123708 r_54_1 G GGCTCTCCCT]chr11:130092733] . Too_low_VAF SVTYPE=BND;MATEID=r_54_0;SVINSLEN=9;SVINSSEQ=GCTCTCCCT TR:VR 197:3 70:0 chr12 132560747 r_77_0 T T]chr19:10218786] . PASS SVTYPE=BND;MATEID=r_77_1 TR:VR 80:5 53:0 chr19 10218786 r_77_1 A A]chr12:132560747] . PASS SVTYPE=BND;MATEID=r_77_0 TR:VR 80:5 53:0 chr14 73307097 d_528 C . PASS END=73319084;SVTYPE=DEL;SVLEN=-11987;SVINSLEN=2;SVINSSEQ=CA TR:VR 16:10 38:0 chr15 100614778 d_709 A . Too_small_size END=100614813;SVTYPE=DEL;SVLEN=-35 TR:VR 39:9 34:0 chr15 75509602 d_702 A . PASS END=75509899;SVTYPE=DEL;SVLEN=-297 TR:VR 54:3 19:0 chr16 36042994 i_451 A . PASS END=36042997;SVTYPE=INS;SVINSLEN=121;SVINSSEQ=GGATTCTGAGACACTTCTTTGTTTGTGTGTGCATTCATCTCACAGGGTTGATCCTTTCTTTAGACTGAGCAGTTTTGAAACACTCTTTTTGTAGAAACTGCAAGTGGATATTTGAGCACAT TR:VR 39:17 20:0 chr2 203369758 r_215_0 G [chr3:74428273[A . PASS SVTYPE=BND;MATEID=r_215_1 TR:VR 63:11 48:0 chr3 74428273 r_215_1 A [chr2:203369758[A . PASS SVTYPE=BND;MATEID=r_215_0 TR:VR 63:11 48:0 chr22 28985425 d_1242 T . PASS END=28985880;SVTYPE=DEL;SVLEN=-455 TR:VR 42:6 35:0 chr3 182638991 d_1350 A . PASS END=182639056;SVTYPE=DEL;SVLEN=-65 TR:VR 41:20 27:0 chr3 79612358 d_1298 C . PASS END=79612872;SVTYPE=DEL;SVLEN=-514;SVINSLEN=90;SVINSSEQ=AGACTATTATCTTTTACAAACACTGCAGAAGTCACTGCCACAGAATGCTGTGTTGGTATTTCGCCTTCATGTGATTTACAATTTATATAT TR:VR 35:6 19:0 chr5 180609064 d_1506 A . Too_small_size END=180609106;SVTYPE=DEL;SVLEN=-42 TR:VR 62:6 20:0 chr5 7372867 i_989 C . PASS END=7372912;SVTYPE=INS;SVINSLEN=446;SVINSSEQ=ATCACCACCACGACCTCCACCGTCACCACCACTACCTCCACCACCCCCACCACTTCCACCATCACCACCACTACTTCCACCACCACCACCACCACCTCCACCATCACCACCACCACCACCACCATTACCACCACTACCTCCTACCATCACCACCACTGCCTCCACCATCACCACTACCTCCACCAACACTGCCAACATGATCTTCATCACCACCACACATCACCACCACTACCACCACCTCCTACTACCACCACCTCCACCACCACCACCACCACCACCACCACCATCACCACCAACATCACCACCTCTACCACCACCACCACCATCTCCACCACCACCACTACTACTTCCACCCACCCTCCACCACCAACATGATACACATCACCACCACCACCTTCACCACCACCACCTGTACGTACATATGTACGTTCGTGCCCAAATGTGTG TR:VR 44:5 35:0 chr8 86162572 r_352_0 A [chr8:86177102[TG . PASS SVTYPE=BND;MATEID=r_352_1;SVINSLEN=1;SVINSSEQ=T TR:VR 173:9 41:0 chr8 86177102 r_352_1 G [chr8:86162572[AG . PASS SVTYPE=BND;MATEID=r_352_0;SVINSLEN=1;SVINSSEQ=A TR:VR 173:9 41:0 chrX 150024653 d_1934 T . PASS END=150025804;SVTYPE=DEL;SVLEN=-1151;SVINSLEN=1;SVINSSEQ=T TR:VR 32:15 15:0 chrX 4907692 d_1883 A . PASS END=4907846;SVTYPE=DEL;SVLEN=-154 TR:VR 46:7 26:0 chr1 96007972 r_11 A . PASS END=96017661;SVTYPE=DEL;SVLEN=-9689;SVINSLEN=1;SVINSSEQ=T TR:VR 46:7 36:0 chr12 113189474 d_407 A . PASS END=113189594;SVTYPE=DEL;SVLEN=-120 TR:VR 52:8 22:0 chr12 132560781 r_78_0 C [chr19:10218877[TTTTTTTTTTGATACAGGGTA . PASS SVTYPE=BND;MATEID=r_78_1;SVINSLEN=20;SVINSSEQ=TTTTTTTTTTGATACAGGGT TR:VR 80:8 53:0 chr19 10218877 r_78_1 A [chr12:132560781[ACCCTGTATCAAAAAAAAAAA . PASS SVTYPE=BND;MATEID=r_78_0;SVINSLEN=20;SVINSSEQ=ACCCTGTATCAAAAAAAAAA TR:VR 80:8 53:0 chr19 17003912 r_198_0 T T]chr19:17029181] . PASS SVTYPE=BND;MATEID=r_198_1 TR:VR 44:8 41:0 chr19 17029181 r_198_1 G G]chr19:17003912] . PASS SVTYPE=BND;MATEID=r_198_0 TR:VR 44:8 41:0 chr2 205737543 d_1081 A . PASS END=205737591;SVTYPE=DEL;SVLEN=-48 TR:VR 24:8 24:0 chr3 183685324 r_272 A . PASS END=183699116;SVTYPE=DEL;SVLEN=-13792 TR:VR 54:19 40:0 chr4 25300699 d_1387 A . PASS END=25300890;SVTYPE=DEL;SVLEN=-191 TR:VR 29:16 15:0 chr8 136114358 d_1745 T . PASS END=136115491;SVTYPE=DEL;SVLEN=-1133 TR:VR 80:56 18:0 chr8 86433334 d_1719 C . PASS END=86433930;SVTYPE=DEL;SVLEN=-596 TR:VR 83:8 31:0 chrX 150131719 d_1935 C . PASS END=150132040;SVTYPE=DEL;SVLEN=-321 TR:VR 32:5 36:0 chrX 53125878 d_1900 T . Too_small_size END=53125923;SVTYPE=DEL;SVLEN=-45 TR:VR 36:10 39:1 chr12 113475069 d_408 A . Too_small_size END=113475111;SVTYPE=DEL;SVLEN=-42 TR:VR 52:10 29:0 chr16 378205 i_421 C . PASS END=378207;SVTYPE=INS;SVINSLEN=608;SVINSSEQ=GCACTGTAACCATCGCCACCCGCACCGCTATCGCCACCCTGACCATCATCGCCACCCACACTGCCATCGCCACCCGCACCGCCATCGCCACCCGCACTGCCATCCTCACCAGCACTGGACATCGCCACCGCACTGCTATCGCCACCCGCACTGCCATCGCCACCCGCACTGCTATCGCCACCCTTGACTGCAATCGCCACCCTGACTGCCATCGCCACCCGCACTGCACTATCCCCACCCGCACTCTCTATCGCCACCCGCACTGTCATCGCCACCTGTTCATAGCACTGCATACATATCGCCACCCCGACTGCATCATCGCCACCCACACTGCCCATCGCCACCCGCACTGCCATCGCCACCCGCACTGCCAACCTCACCCGCACCGACATCGCCACCCGCACCGCCATCGCCACCCGCACCGGGACATCGCCACCCGCACTGCCACGCGCTACCCGCACTGCCATCGCCACCCGCACTGCCATCGCCACTCTGACTGCTATCCCCACCCACACTGCCATCCCCACCCGCACTGCCATCGCCACCCGCACTGCCATAGCGACCCGCACTGCCATCGCCACCCGCACTAACCATCCCCACCTGGCGCA TR:VR 56:8 14:0 chr16 46515571 d_796 C . PASS END=46515701;SVTYPE=DEL;SVLEN=-130 TR:VR 43:18 23:0 chr21 16252276 d_1191 T . PASS END=16252766;SVTYPE=DEL;SVLEN=-490 TR:VR 35:11 31:0 chr3 102808804 d_1321 T . PASS END=102811665;SVTYPE=DEL;SVLEN=-2861;SVINSLEN=172;SVINSSEQ=ATATATATGTCTATATAGTTTATATATATATGTCTACTTATATATAGACATATATATATGTCTACTTATATAGACATATATATGTCTACTTATATAGACATATATATATGTCTACTTATATAGACATATATATGTCTACTTATATAGACATATATATATGTCTACTTATATA TR:VR 58:12 41:0 chr3 80426961 d_1300 G . PASS END=80427241;SVTYPE=DEL;SVLEN=-280 TR:VR 37:15 32:0 chr4 27472883 d_1388 G . Too_small_size END=27472920;SVTYPE=DEL;SVLEN=-37 TR:VR 38:9 33:0 chr5 7559289 d_1447 G . PASS END=7573081;SVTYPE=DEL;SVLEN=-13792 TR:VR 36:8 44:0 chr7 159006233 d_1667 G . PASS END=159006385;SVTYPE=DEL;SVLEN=-152 TR:VR 39:3 32:0 chr8 136748161 d_1746 A . PASS END=136756737;SVTYPE=DEL;SVLEN=-8576 TR:VR 86:5 39:0 chr8 87283685 d_1720 G . PASS END=87283740;SVTYPE=DEL;SVLEN=-55 TR:VR 86:29 19:0 chrX 15091885 d_1885 C . PASS END=15092216;SVTYPE=DEL;SVLEN=-331 TR:VR 31:18 29:0 chr1 215423714 r_23_0 T [chr1:215514775[CAAGT . PASS SVTYPE=BND;MATEID=r_23_1;SVINSLEN=4;SVINSSEQ=CAAG TR:VR 129:10 48:0 chr1 215514775 r_23_1 T [chr1:215423714[CTTGT . PASS SVTYPE=BND;MATEID=r_23_0;SVINSLEN=4;SVINSSEQ=CTTG TR:VR 129:10 48:0 chr10 42098849 d_264 C . Too_low_VAF END=42099143;SVTYPE=DEL;SVLEN=-294;SVINSLEN=23;SVINSSEQ=GAATGGAATGGAATGGAAGAGTC TR:VR 325:3 182:1 chr11 1406579 d_321 G . PASS END=1408197;SVTYPE=DEL;SVLEN=-1618 TR:VR 23:6 27:0 chr13 113371737 i_300 A . PASS END=113371737;SVTYPE=INS;SVINSLEN=822;SVINSSEQ=CCCCTCCCTCCTCCGGGAGACCCCTCCCTCCCTCCTCCTGAGGCCCCTCTCCCTCCTCCTGAGACCCCTCCCTCCTCCTGAGGCCCCTCCCTCCTCCTGAGGCCCCTCCTCCTCCTGCCTCCTGAGACCCCCTCCTCCTGAGCCCCCTCCTCCCCTGGAGGCCCCTCCCTCCTCCTGAGACCCCCCTCCTCCTGAGACCCCCTCCCTCCTCCTGAGACCCCTCCCTCCTCCTGAGGCCCCTCCTCCTCCTGAGGCCCCTCCTCCTCCTGAGACCCCTCCCTCCTCCTGAGACCCCTCCCTCCTCCTGAGACCCCTCCCTCTCCTGAGACCCCTCCCTCCTCCTGAGGCCCCTCCCTCCTCCTGAGGCCCCCTCCCTCCTCCTGAGGCCCCTCCTCCTCCTGAGGCCCTCCCTCCTCCTGAGGCCCCTCCCTCCTCCTGAGACCCCTCCCTCCTCCTGAGGCCCCTCCCTCCTCCTGAGGCCCCTCCCCTCCTCCTGAGACCCCTCCCTCCTCCTGAGGCCCCCTCCCCTCCTCCTGAGGCCCCTCCTCCTCCTGAGACCCCTCCCTCCTCCTGAGGCCCCTCCCTCCTCCTGAGGCCCCTCCCTCCTCCCTGAGACCCCTCCCTCCTCCTGCAGGCCCCCTCCTCCCTCCTGAGGCCCCTCCCTCCTCCCTGAGACCCCTCCCTCCTCCTGAGGCCCCCTCCCTCCTCCTCCTGAGGCCCCCTCCTCCTCCTCCTGAGGCACCCCCCCCTCCTCCTCCTGAGGCCCCTCCCTCCTCCTGAGGCCCCTCCCTCCTCCTGAGGCCCCCTCCCTCCTCCTGAGGC TR:VR 58:5 19:0 chr15 17022181 i_390 C . Too_small_size END=17022181;SVTYPE=INS;SVINSLEN=47;SVINSSEQ=TATGTGGCCTTAAGTGGAAAAGGCAATATCTTCACATAAAAACTAGA TR:VR 87:6 67:0 chr22 29205860 r_244_0 G G]chr22:29241010] . PASS SVTYPE=BND;MATEID=r_244_1 TR:VR 73:20 39:0 chr22 29241010 r_244_1 T T]chr22:29205860] . PASS SVTYPE=BND;MATEID=r_244_0 TR:VR 73:20 39:0 chr3 102808931 d_1322 A . PASS END=102811665;SVTYPE=DEL;SVLEN=-2734;SVINSLEN=148;SVINSSEQ=TATATATATGTCTACTTATATAGACATATATATATGTCTACTTATATAGACATATATATGTCTACTTATATAGACATATATATATGTCTACTTATATAGACATATATATGTCTACTTATATAGACATATATATATGTCTACTTATATA TR:VR 56:12 41:0 chr3 80560421 d_1301 A . PASS END=80560502;SVTYPE=DEL;SVLEN=-81 TR:VR 36:12 31:0 chr5 79263839 d_1478 C . PASS END=79275228;SVTYPE=DEL;SVLEN=-11389 TR:VR 44:21 37:0 chr8 137027976 d_1747 A . PASS END=137030288;SVTYPE=DEL;SVLEN=-2312 TR:VR 75:5 29:0 chr8 87344663 d_1721 A . PASS END=87345010;SVTYPE=DEL;SVLEN=-347 TR:VR 97:17 36:0 chr9 93213769 i_1232 A . PASS END=93213769;SVTYPE=INS;SVINSLEN=212;SVINSSEQ=CAGAGTAAAGACTTTGTCTCAAAAAAAAAAAGATGTTGCTGAAAAAAAATATCAACCATAATCCAACCAGGTGAACACAACTGCTTTTATTTTTGAATAGGACCTTCTAGGTCTTGTTTACACATGTATAGCATTTAAAAATACAGCTGCAGTTCAGGGTGTCACGACTTCTAGAATCTGTCTCTGGAGTGTCTTTAAAGCTATTGTTTTGC TR:VR 33:10 19:0 chrX 151396144 r_390 C . PASS END=151431504;SVTYPE=DUP;SVLEN=35360 TR:VR 54:3 55:0 chr1 215562745 d_155 T . PASS END=215563140;SVTYPE=DEL;SVLEN=-395 TR:VR 62:9 27:0 chr1 97323388 r_12_0 G [chr14:76187623[GTGTGTGTGTGTGTGTGTGTGTATATATATGTGTATATATATACGTATATATATATACGTATATATGTATATATATATACGTGTATATATATACGTATATATGTGTATATATACACATATATACGTGTATATATACATATATATGTGTATATATACATATATATG . PASS SVTYPE=BND;MATEID=r_12_1;SVINSLEN=164;SVINSSEQ=GTGTGTGTGTGTGTGTGTGTGTATATATATGTGTATATATATACGTATATATATATACGTATATATGTATATATATATACGTGTATATATATACGTATATATGTGTATATATACACATATATACGTGTATATATACATATATATGTGTATATATACATATATAT TR:VR 72:7 55:1 chr14 76187623 r_12_1 G [chr1:97323388[ATATATATGTATATATACACATATATATGTATATATACACGTATATATGTGTATATATACACATATATACGTATATATATACACGTATATATATATACATATATACGTATATATATATACGTATATATATACACATATATATACACACACACACACACACACACG . PASS SVTYPE=BND;MATEID=r_12_0;SVINSLEN=164;SVINSSEQ=ATATATATGTATATATACACATATATATGTATATATACACGTATATATGTGTATATATACACATATATACGTATATATATACACGTATATATATATACATATATACGTATATATATATACGTATATATATACACATATATATACACACACACACACACACACAC TR:VR 72:7 55:1 chr10 42177362 i_142 G . PASS END=42177362;SVTYPE=INS;SVINSLEN=290;SVINSSEQ=CGGCTTTTGCACCACACCGCCGCCCGACGACTTGCACCCCCGCCGCCGCGAGCGGCGCGCCCCCGGACGTCGCTTTTTGCCCGCCGCGGCTTTTGCCCCCCCCCGCCGCCGCGGCTTTTTCCCCCACCCGCGGCTTTTACCGCCCGTCGCCGCGGCTTTTTTTGCCCACACCCGCCGCCGCGGCTTTTTGCCCCCCCCGGCTCCTCGGCGTTTTGCCCGCCGCGGCTTTTTGCGTCCCCGCCGCCGCGGCTTTTTACCACCCCCCCCCGTGCCGCGGTTGTTACCCGCCG TR:VR 49:3 50:1 chr12 114829190 r_74_0 T ]chr5:158925330]C . PASS SVTYPE=BND;MATEID=r_74_1 TR:VR 74:15 53:0 chr5 158925330 r_74_1 C C[chr12:114829190[ . PASS SVTYPE=BND;MATEID=r_74_0 TR:VR 74:15 53:0 chr15 84004369 d_706 G . PASS END=84005268;SVTYPE=DEL;SVLEN=-899 TR:VR 53:6 30:0 chr21 17994885 d_1193 G . PASS END=17995430;SVTYPE=DEL;SVLEN=-545 TR:VR 34:15 21:0 chr22 29208839 r_245_0 C [chr22:29241046[A . PASS SVTYPE=BND;MATEID=r_245_1 TR:VR 74:21 39:0 chr22 29241046 r_245_1 A [chr22:29208839[A . PASS SVTYPE=BND;MATEID=r_245_0 TR:VR 74:21 39:0 chr3 103274853 r_263_0 C ]chr8:127360251]A . PASS SVTYPE=BND;MATEID=r_263_1 TR:VR 162:12 54:0 chr8 127360251 r_263_1 A A[chr3:103274853[ . PASS SVTYPE=BND;MATEID=r_263_0 TR:VR 162:12 54:0 chr3 84129357 r_261 A . PASS END=84154903;SVTYPE=DEL;SVLEN=-25546;SVINSLEN=3;SVINSSEQ=TAC TR:VR 50:12 49:0 chr5 79880516 r_295 T . PASS END=79900177;SVTYPE=DEL;SVLEN=-19661 TR:VR 45:16 50:0 chr7 127321620 d_1629 C . PASS END=127322083;SVTYPE=DEL;SVLEN=-463 TR:VR 47:6 42:0 chr8 137136949 d_1748 C . PASS END=137139743;SVTYPE=DEL;SVLEN=-2794 TR:VR 94:10 36:0 chr9 95743444 r_369 G . PASS END=95755740;SVTYPE=DEL;SVLEN=-12296 TR:VR 24:14 36:0 chrX 154097214 d_1936 G . PASS END=154097930;SVTYPE=DEL;SVLEN=-716 TR:VR 23:5 24:0 chr1 215741561 d_156 C . PASS END=215741627;SVTYPE=DEL;SVLEN=-66 TR:VR 55:12 37:0 chr12 115216477 d_410 T . Too_low_VAF END=115219458;SVTYPE=DEL;SVLEN=-2981 TR:VR 62:3 27:0 chr12 69229060 d_395 A . Too_small_size END=69229042;SVTYPE=INS;SVINSLEN=31;SVINSSEQ=ATATGTACATAATATATACATATATTATATA TR:VR 47:3 29:0 chr13 98903153 r_91 T . PASS END=98911746;SVTYPE=DEL;SVLEN=-8593 TR:VR 85:5 37:0 chr15 85483620 r_153 G . PASS END=85493183;SVTYPE=DEL;SVLEN=-9563 TR:VR 63:13 37:0 chr22 33800897 r_246 G . PASS END=33811528;SVTYPE=DEL;SVLEN=-10631 TR:VR 50:13 52:0 chr3 103296629 r_264 T . PASS END=103426930;SVTYPE=DUP;SVLEN=130301 TR:VR 129:24 51:0 chr3 87466145 d_1302 A . PASS END=87466317;SVTYPE=DEL;SVLEN=-172 TR:VR 28:4 43:0 chr4 43057561 d_1390 A . PASS END=43057697;SVTYPE=DEL;SVLEN=-136 TR:VR 41:11 30:0 chr7 73580496 d_1613 A . PASS END=73581724;SVTYPE=DEL;SVLEN=-1228 TR:VR 39:14 21:0 chr1 98856208 d_31 A . PASS END=98858176;SVTYPE=DEL;SVLEN=-1968 TR:VR 37:14 32:0 chr10 44066155 d_265 A . PASS END=44066273;SVTYPE=DEL;SVLEN=-118;SVINSLEN=13;SVINSSEQ=GGGTTTCCTCCTG TR:VR 44:16 21:0 chr16 56101787 d_798 C . PASS END=56103041;SVTYPE=DEL;SVLEN=-1254 TR:VR 39:15 29:0 chr17 21969081 i_479 A . Too_low_VAF END=21969086;SVTYPE=INS;SVINSLEN=198;SVINSSEQ=TGCAATGTAATGGAGTTGAATGGAATGGAACGGCATGGAATGGAATTGAATGGGATCAACCCGAGTGGAATGGAATGGAATGGAATGAAATGGAATCAACGCGAGTGGAATGGAACAGAATAAAATGGAATGGAATGGAATGGAACGGAATCAACCCGAGTGGAATGGAATGGAATGGAATGGAATATCAACCCAATT TR:VR 256:6 93:1 chr2 212148106 d_1082 T . PASS END=212151315;SVTYPE=DEL;SVLEN=-3209;SVINSLEN=3;SVINSSEQ=TAT TR:VR 33:15 37:0 chr21 19164999 d_1194 C . PASS END=19165486;SVTYPE=DEL;SVLEN=-487 TR:VR 33:16 19:0 chr3 103414125 r_265 T . PASS END=103422048;SVTYPE=DEL;SVLEN=-7923 TR:VR 94:23 44:0 chr4 46149822 d_1391 C . PASS END=46149975;SVTYPE=DEL;SVLEN=-153 TR:VR 31:9 34:0 chrX 57813266 r_384 C . PASS END=57818660;SVTYPE=DEL;SVLEN=-5394 TR:VR 38:12 36:0 chr1 219029135 r_24_0 G G]chr1:219036829] . PASS SVTYPE=BND;MATEID=r_24_1 TR:VR 103:15 32:0 chr1 219036829 r_24_1 T T]chr1:219029135] . PASS SVTYPE=BND;MATEID=r_24_0 TR:VR 103:15 32:0 chr10 102852436 d_300 A . PASS END=102852793;SVTYPE=DEL;SVLEN=-357 TR:VR 17:12 26:0 chr10 46011397 d_266 A . PASS END=46011554;SVTYPE=DEL;SVLEN=-157 TR:VR 26:6 17:0 chr16 57351364 d_799 G . PASS END=57351441;SVTYPE=DEL;SVLEN=-77 TR:VR 41:10 24:0 chr2 216532871 d_1083 A . PASS END=216532957;SVTYPE=DEL;SVLEN=-86 TR:VR 35:14 25:0 chr2 91505316 d_1028 G . Too_low_VAF END=91505590;SVTYPE=DEL;SVLEN=-274;SVINSLEN=18;SVINSSEQ=CTGGCATGGGTGGCTTGG TR:VR 147:7 115:0 chr21 19744005 r_229_0 A ATAATAAAAAATAAAAA[chr8:91444875[ . PASS SVTYPE=BND;MATEID=r_229_1;SVINSLEN=16;SVINSSEQ=TAATAAAAAATAAAAA TR:VR 133:15 46:0 chr8 91444875 r_229_1 A ]chr21:19744005]TTTTTATTTTTTATTAA . PASS SVTYPE=BND;MATEID=r_229_0;SVINSLEN=16;SVINSSEQ=TTTTTATTTTTTATTA TR:VR 133:15 46:0 chr8 138875501 i_1204 A . PASS END=138875532;SVTYPE=INS;SVINSLEN=115;SVINSSEQ=GGAGAAAGCAGACAATCCAAAATATGATTACATACCTTCTCCTCATCCAAATCTCTAATCCTACTACACTGACCTACATGTACTTCTCTTCAGGCACTGTGTCTGTGCTTAAATA TR:VR 78:8 46:0 chr8 89281898 d_1722 T . PASS END=89282060;SVTYPE=DEL;SVLEN=-162 TR:VR 102:10 30:0 chr1 219032667 r_25_0 T [chr11:48363930[T . PASS SVTYPE=BND;MATEID=r_25_1 TR:VR 116:25 60:0 chr11 48363930 r_25_1 T [chr1:219032667[T . PASS SVTYPE=BND;MATEID=r_25_0 TR:VR 116:25 60:0 chr10 102853161 r_38 T . PASS END=102871717;SVTYPE=DEL;SVLEN=-18556 TR:VR 21:12 44:0 chr13 114083537 r_94 G . PASS END=114084813;SVTYPE=DEL;SVLEN=-1276;SVINSLEN=89;SVINSSEQ=TCCTCGCGGGGAAATCACGGGGAAGTGGTGAGTCTGGAGCATCGACTCCCTCCTCCTCGCGGGGAAATCACGGGGAAGTGGTGAGAGTC TR:VR 45:3 27:0 chr15 20070708 d_687 A . PASS END=20071465;SVTYPE=DEL;SVLEN=-757 TR:VR 60:15 69:0 chr16 58802551 r_160 C . PASS END=58823403;SVTYPE=DEL;SVLEN=-20852 TR:VR 58:16 49:0 chr21 20596066 r_230 A . PASS END=20635242;SVTYPE=DEL;SVLEN=-39176 TR:VR 40:16 65:0 chr3 103454903 r_266_0 C C[chr8:127360257[ . Too_low_VAF SVTYPE=BND;MATEID=r_266_1 TR:VR 170:7 55:0 chr8 127360257 r_266_1 T ]chr3:103454903]T . Too_low_VAF SVTYPE=BND;MATEID=r_266_0 TR:VR 170:7 55:0 chr3 184753767 d_1356 A . PASS END=184754322;SVTYPE=DEL;SVLEN=-555;SVINSLEN=9;SVINSSEQ=AGAGGTGGT TR:VR 38:3 21:0 chr5 86629770 d_1481 G . PASS END=86630470;SVTYPE=DEL;SVLEN=-700 TR:VR 41:15 31:0 chr7 77011596 d_1615 T . PASS END=77023748;SVTYPE=DEL;SVLEN=-12152 TR:VR 44:11 34:0 chr8 89983392 d_1723 A . Too_small_size END=89983431;SVTYPE=DEL;SVLEN=-39;SVINSLEN=2;SVINSSEQ=AA TR:VR 103:31 27:0 chr9 99769236 r_370 A . PASS END=99779417;SVTYPE=DEL;SVLEN=-10181 TR:VR 32:22 42:0 chr1 219036671 r_26_0 G ]chr11:48363908]TT . PASS SVTYPE=BND;MATEID=r_26_1;SVINSLEN=1;SVINSSEQ=T TR:VR 117:15 59:0 chr11 48363908 r_26_1 T TA[chr1:219036671[ . PASS SVTYPE=BND;MATEID=r_26_0;SVINSLEN=1;SVINSSEQ=A TR:VR 117:15 59:0 chr12 71376658 d_397 T . PASS END=71376782;SVTYPE=DEL;SVLEN=-124 TR:VR 37:23 30:0 chr14 104300774 i_334 T . PASS END=104300823;SVTYPE=INS;SVINSLEN=3035;SVINSSEQ=TCTCCCTCTTCCTCATGGATGATTGGTGCCTGATGTTGCATCCTCACTTGTGATCTTGGTCTCCCTCCCTCATCTCGTTCTCGTTCTCTGCCTCCACCCTGGTGCCTACTGCTACCATGGAGACCATCTCTCTGTGTGTGTACACATGTCTGTGCCTCTCTGTCTCTCTGTCTGTCATCTCTGTCTCTATCTATGTATGTATGTCTCTATGTATTGTATGTATGTCTCGTGTCCATCTATCGTATCCATCTGTCCATCCCATCACCCGTCTGTCATCTGTGCCCGTGTCTGTGTGTCTGTCTGTCTGTCTGTCCATCGTCATTCGTCCCCGTCTGTCTGCGTCTCTCTCTCTCTCTCTCTCTCCCCGTCTCGTCTCTCTCCCCCGTCTCTCTCTCTGTCCGTCTCTCTCTGCGTGCGTCTCTCTCCCCACCTGTGCGTCTCCTCTCTGCGTCTCTCGTAAATCTCTGAAATATCCTCTCCTGCGTCTACCGTCTGCGTCCCTCCGTCCATCTCCCCTTCGTGGTCTCTCTGGATCTCGTCTCTGCAGTGCGTCTCCATGCCGTCCTCCTCCTGCCGTCTCACTCGTCTCTGCGTCTTGGGTGTCCACAAGTCACCGTCCACCGTGAATAGTCTCTGCCGTCTGCGTCTTCCCTCCTCCTCTCGCTGCGTCTCGTCTCGTCCTCTGCGTGGTCCTCGTCTCTCTCGTCCTGCATTCTCTGCGTCTGCGTCTCCTGCTGTCTCGTCTTGCGTGCGTCTCGTCGTCCTCCGTCTGTCTCTCGTCCTCGTCTCTAATTGGATCGTCTCCTCCCTCCCTGCGTCCTCACCGTGCGTCCTCGTCCCCTTCGTCGTCTCGTCGTTCGATGCGTCTGCGTCCTCGTCGTAAATGCCGTCATCGTCATTCGTCGTCCTCTCACCATGACCACCGGGTAAATGCCACCATCTCCTCCACCGCCGCCGTGGTCTGATGTCTCCTCCACCGATCTCTCTCTGTCCACCGGTGCCTGGGTGCGCCACTGTCTCTCGCAATCCACCACCACCATCACCACCATCACCTCCACCACCACCACCTCCACCACCACCACCACCACCACCTCCACCTCCACCACCACCACCTCCACCACCACCACCACCACCACCACCACACTCCCACCACCACCACCACCACCACCTCCACCACCACCACCACCACCACACTCCACCACCACCTCCACCACCACCACCTCCACCACCACCTCCACCACCACCACCACCACCACCACCACCACCACCACCTCTCCACCACCACCTCCGCCACCACCACCACCACCACCACCGCCGCCACCACCACCACCTCCACCACCACCTCCACCACCACCACCTCCACCACCACCACCACCACCACCACCTCCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCTCCACCTCCACCACCACCTCCACCACCACCACCACCACCACCACCACCACCACCTCCACCACCACCACCACCACCACCTCCACCACCACCACCTCCACCACCACCACCACACTCACCACCACCACCACCTCCGCCACCACCACCTCCACCACCACCACCACCACCACCACCACCACCACCTCCACCACCACCACCACCTCCACCACCTCCGCCACCACCACCTCCCACCACCACCACCACCTCCACCACCACCTCCGCCACCACCACCACCACCACCTCCACCACCACCTCCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCTCCACCACCACCACCTCCACCACCACCACCTCCACCACCACCACCTCCACCACCACCACCTCCGCCGCCACCACCACCACCACCACCACCACCACCACCACCACCTCCACCACCACCACCTCCACCACCACCACCACCCACCACCACCTCCGCCACCACCACCACCTCCACCACCACCTCCGCCACCACCACCTCCACCACCACCACCACCACCACCACCACCTCCGCCACCACCACCTCCACCACCACCACCACCACCACCACCACCTCCACCACCACCTCCACCACCTCCCACCACCACCACCCACACCTCCACCACCACCACCCACCACCTCCTCCACCACCACCTCCACCACCACCACCACCACCACCACCACCTCCACCACCACCACCTCCACCACCTCCACCACCACCACCACCACCACCACCACCTCCACCACCACCACCTCCACCACCACCACCACCTCCACCACCACCCCTCCACCACCACCACCACCTCCACCACCACCTCCGCCACCACCACCTCCACCACCACCACCACCACCACCACCACCTCCGCCACCACCACCTCCACCACCACCACCACCACCACCACCTCCGCCGCCACCACCACCTCCGCCACCACCACCACCTCCACCACCTCCGCCACCACCACCACCACCACCTCCACCACCACCTCCACCACCACCACCACCACCACCACCACCACCACCACCACCACCTCCACCACCTCCACCACCACCACCTCCACCACCACCACCACCACCACCACCACCACCTCCACCACCACCTCCGCCACCACCACCACCACCACCACCACCACCACCACCACCACCACCTCCACCACCACCACCACCACCACCACCACCTCCACCACCACCTCCCACCACCACCACCACCTCCACCACCACCACCTCCACCACCACACACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCTCCACCACCACCACCACCACACCCACCACCACCACCACCACCACCACCACCACCTCCCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACACCACCACCACCACCACCACCACCTCCACCACCACCACCTCCACCACCACCACCACCACCTCCACCACCACCTCCACCACCACCACCACCACCACCACCACCTCCCACCACCACCACCACCACCACCACCACCACCACCACCTCCACCACC TR:VR 26:4 27:0 chr17 82586544 i_508 T . PASS END=82586545;SVTYPE=INS;SVINSLEN=100;SVINSSEQ=GGGGCGGGGGGGAAAGGAGGAGAGGGGAGACCACAGGGAGGTGAAAGGTGGGCGGGGGGGGAAAGGAGGAGAGGGGAGACCACAGGGAGGTGAAAGGTGG TR:VR 44:3 19:0 chr2 21844334 d_977 G . PASS END=21844503;SVTYPE=DEL;SVLEN=-169 TR:VR 46:8 33:0 chr20 28822383 r_222_0 A ]chrUn_KI270442v1:173357]TGCCCTATGGTGGAAACGGAAACATCTTCAAATTAATACTACACAGAAGCATTCAGAGAAACTTCTTTGTGATGAGTGCATTCATCACACAGAGTTGAACCTTTCTTTTGATTGAGCAGTTTTGAAACACTCTCTTTGTGATATGAGAAGATATTTCCATTTCTACCATAGGCCACAAAGTATTCAAAATGTCCACCTGCAGATTCTACAAAAAGAGTGTTTCCGAACTCCTCAATCAAAAGAAAGGTTCAACTCTGTGAGATGAACGCAAACGTCACAAG . Too_low_VAF SVTYPE=BND;MATEID=r_222_1;SVINSLEN=280;SVINSSEQ=TGCCCTATGGTGGAAACGGAAACATCTTCAAATTAATACTACACAGAAGCATTCAGAGAAACTTCTTTGTGATGAGTGCATTCATCACACAGAGTTGAACCTTTCTTTTGATTGAGCAGTTTTGAAACACTCTCTTTGTGATATGAGAAGATATTTCCATTTCTACCATAGGCCACAAAGTATTCAAAATGTCCACCTGCAGATTCTACAAAAAGAGTGTTTCCGAACTCCTCAATCAAAAGAAAGGTTCAACTCTGTGAGATGAACGCAAACGTCACAA TR:VR 331:4 226:1 chrUn_KI270442v1 173357 r_222_1 G GTTGTGACGTTTGCGTTCATCTCACAGAGTTGAACCTTTCTTTTGATTGAGGAGTTCGGAAACACTCTTTTTGTAGAATCTGCAGGTGGACATTTTGAATACTTTGTGGCCTATGGTAGAAATGGAAATATCTTCTCATATCACAAAGAGAGTGTTTCAAAACTGCTCAATCAAAAGAAAGGTTCAACTCTGTGTGATGAATGCACTCATCACAAAGAAGTTTCTCTGAATGCTTCTGTGTAGTATTAATTTGAAGATGTTTCCGTTTCCACCATAGGGCA[chr20:28822383[ . Too_low_VAF SVTYPE=BND;MATEID=r_222_0;SVINSLEN=280;SVINSSEQ=TTGTGACGTTTGCGTTCATCTCACAGAGTTGAACCTTTCTTTTGATTGAGGAGTTCGGAAACACTCTTTTTGTAGAATCTGCAGGTGGACATTTTGAATACTTTGTGGCCTATGGTAGAAATGGAAATATCTTCTCATATCACAAAGAGAGTGTTTCAAAACTGCTCAATCAAAAGAAAGGTTCAACTCTGTGTGATGAATGCACTCATCACAAAGAAGTTTCTCTGAATGCTTCTGTGTAGTATTAATTTGAAGATGTTTCCGTTTCCACCATAGGGCA TR:VR 331:4 226:1 chr21 24579932 r_231_0 C [chr21:45721528[AAACA . PASS SVTYPE=BND;MATEID=r_231_1;SVINSLEN=4;SVINSSEQ=AAAC TR:VR 60:13 54:0 chr21 45721528 r_231_1 A [chr21:24579932[GTTTA . PASS SVTYPE=BND;MATEID=r_231_0;SVINSLEN=4;SVINSSEQ=GTTT TR:VR 60:13 54:0 chr3 103475787 d_1324 A . PASS END=103475882;SVTYPE=DEL;SVLEN=-95 TR:VR 42:13 26:0 chr5 86696994 r_296 T . PASS END=86724663;SVTYPE=DEL;SVLEN=-27669 TR:VR 59:19 55:0 chr6 32588911 i_1042 C . PASS END=32588941;SVTYPE=INS;SVINSLEN=330;SVINSSEQ=TAGTGACTTAAGTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGAGGGAGTCTCACCCTCTCGCCCAGGCTGGAGTGCAGTGGCATGATCTTGGCTCACTGCAACTTCTGCCTCCTGGGTTTAAGCGATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGTGTGCGCCACTACCCCAGCTAATTTTTGTATTTTTAGTAGAGATGACGTTTCACCATATTGGTCAGACGGATCTCAAACTCCTGACCTTGTGATCCGCCCACCTCCATGTCTCAAAGTGCTGGGATTACAGGCGTGAACCACCATGCCTGGCCAGATGCGCAACT TR:VR 46:3 35:1 chr7 77066278 d_1616 A . PASS END=77066537;SVTYPE=DEL;SVLEN=-259 TR:VR 26:19 38:0 chr8 94439562 d_1724 G . Too_small_size;Too_low_VAF END=94439605;SVTYPE=DEL;SVLEN=-43;SVINSLEN=1;SVINSSEQ=A TR:VR 122:6 28:0 chrX 62861366 d_1903 C . PASS END=62864486;SVTYPE=DEL;SVLEN=-3120 TR:VR 41:13 30:0 chr1 220312825 d_157 C . Too_small_size END=220312864;SVTYPE=DEL;SVLEN=-39 TR:VR 87:5 23:0 chr12 120430130 i_225 G . PASS END=120430135;SVTYPE=INS;SVINSLEN=60;SVINSSEQ=GAGAATCGCTTGAACCTGGGAGGCAGTTCTGCCTCAATCTTGGCTCACTGCAACCTCCAC TR:VR 76:33 21:0 chr12 16815489 d_364 C . PASS END=16815546;SVTYPE=DEL;SVLEN=-57 TR:VR 22:9 22:0 chr12 73173366 d_398 T . PASS END=73173653;SVTYPE=DEL;SVLEN=-287 TR:VR 37:10 26:0 chr2 221191000 r_218 T . PASS END=221747282;SVTYPE=DUP;SVLEN=556282 TR:VR 84:9 60:0 chr21 26790231 r_232 G . PASS END=35006290;SVTYPE=DUP;SVLEN=8216059 TR:VR 53:15 67:0 chr5 11645781 r_289 C . PASS END=11648248;SVTYPE=DEL;SVLEN=-2467 TR:VR 49:13 29:0 chr5 89516442 d_1482 G . Too_small_size END=89516483;SVTYPE=DEL;SVLEN=-41 TR:VR 37:6 31:0 chr7 77359054 r_325 G . PASS END=77533019;SVTYPE=DUP;SVLEN=173965 TR:VR 86:14 42:0 chr8 97494250 d_1725 C . Too_small_size END=97494295;SVTYPE=DEL;SVLEN=-45 TR:VR 132:17 23:0 chr9 99795343 d_1793 A . PASS END=99795398;SVTYPE=DEL;SVLEN=-55 TR:VR 27:20 27:0 chr12 120432152 d_412 G . PASS END=120434757;SVTYPE=DEL;SVLEN=-2605;SVINSLEN=10;SVINSSEQ=TTCTGCCTCA TR:VR 77:26 20:0 chr12 17621256 r_58 A . PASS END=19918375;SVTYPE=DUP;SVLEN=2297119 TR:VR 77:12 61:0 chr12 7395552 r_56 C . PASS END=7450414;SVTYPE=DEL;SVLEN=-54862 TR:VR 54:21 46:0 chr15 21569984 d_689 G . PASS END=21570082;SVTYPE=DEL;SVLEN=-98 TR:VR 57:12 52:0 chr16 63235450 r_161 T . PASS END=63591554;SVTYPE=DEL;SVLEN=-356104 TR:VR 69:8 50:0 chr17 22143512 r_176_0 A ]chr8:36160296]T . PASS SVTYPE=BND;MATEID=r_176_1 TR:VR 128:39 112:0 chr8 36160296 r_176_1 T T[chr17:22143512[ . PASS SVTYPE=BND;MATEID=r_176_0 TR:VR 128:39 112:0 chr21 31646698 r_233_0 G [chr21:34927516[T . PASS SVTYPE=BND;MATEID=r_233_1 TR:VR 55:13 41:0 chr21 34927516 r_233_1 T [chr21:31646698[T . PASS SVTYPE=BND;MATEID=r_233_0 TR:VR 55:13 41:0 chr22 37220136 d_1245 A . PASS END=37223165;SVTYPE=DEL;SVLEN=-3029 TR:VR 44:20 18:0 chr3 103888242 d_1325 T . PASS END=103889044;SVTYPE=DEL;SVLEN=-802 TR:VR 34:7 28:0 chr5 9485484 i_990 T . PASS END=9485484;SVTYPE=INS;SVINSLEN=73;SVINSSEQ=GAGCAAACGAAACAGAAGCTATAGAGATTAATTGGGGGAGCAAATACACATGTTCAGAAGTGCTGAACAAAAG TR:VR 44:9 30:0 chr6 43079399 d_1536 G . PASS END=43080890;SVTYPE=DEL;SVLEN=-1491 TR:VR 36:6 17:0 chr7 78522507 d_1617 G . PASS END=78523558;SVTYPE=DEL;SVLEN=-1051 TR:VR 48:10 28:0 chr1 226579562 d_159 G . PASS END=226579854;SVTYPE=DEL;SVLEN=-292 TR:VR 67:8 30:0 chr10 106442917 i_151 A . PASS END=106442917;SVTYPE=INS;SVINSLEN=179;SVINSSEQ=GAAATTTCTACAAGTCCTGATCTTTTTAATGTCTCTATAGTTTTTCTTTGTGCTGTGAAGTTCAATGGGTTTTGACAAATGCATACTACAATATATCAACAATTATAGTACACAGAATAGTTTAATAAACCTAAAAAACAATCCTGTATCACCAATTCAACCCTCCCTTCCTTCCCAGA TR:VR 22:18 27:0 chr12 74488248 d_399 A . PASS END=74494807;SVTYPE=DEL;SVLEN=-6559 TR:VR 34:12 38:0 chr16 642356 r_154 G . PASS END=724073;SVTYPE=DUP;SVLEN=81717 TR:VR 95:7 55:0 chr2 221367226 d_1085 T . PASS END=221367383;SVTYPE=DEL;SVLEN=-157;SVINSLEN=61;SVINSSEQ=AAGGGGACAAGGAGACCCCCAGTGCCTAGATTAAGGGGACATGGGGACCCCCAGTGCCTGG TR:VR 41:3 34:0 chr3 193160633 d_1360 C . PASS END=193161194;SVTYPE=DEL;SVLEN=-561 TR:VR 37:4 25:0 chr6 43079509 d_1537 A . PASS END=43080795;SVTYPE=DEL;SVLEN=-1286;SVINSLEN=243;SVINSSEQ=GGCTGACCCCTCAAAAGGAAACGGCTGGCCAGGACAGTCTCTGGGAAGAACCATCAGGGCTAGCCAGAGGGGCTGCTTCCCAGGGGTCACCCATTTCCACAGTTGAAGAGCATAAGCCACTGTGCCTGGCCAGAGGTGTCAGCCTTTATTTCCAGCCTCTCCTCTGACCCTAGAATGGTTTGCCAAAGGCTCAACAAAGTCCACCTCTTGACTAGCAGCCTTAGAAATGGTTTTCTCATTTGG TR:VR 36:13 17:0 chr7 134366097 r_332 C . PASS END=134403359;SVTYPE=DEL;SVLEN=-37262 TR:VR 49:12 41:0 chr7 80137140 d_1618 A . PASS END=80137709;SVTYPE=DEL;SVLEN=-569 TR:VR 41:20 37:0 chr8 49288124 d_1689 C . Too_small_size END=49288165;SVTYPE=DEL;SVLEN=-41 TR:VR 66:33 29:0 chr1 22766607 r_4_0 C C[chr19:8012115[ . PASS SVTYPE=BND;MATEID=r_4_1 TR:VR 47:4 44:0 chr19 8012115 r_4_1 C ]chr1:22766607]C . PASS SVTYPE=BND;MATEID=r_4_0 TR:VR 47:4 44:0 chr12 18153822 r_59 C . PASS END=18236126;SVTYPE=DEL;SVLEN=-82304;SVINSLEN=10;SVINSSEQ=TTGTTTTTGA TR:VR 68:7 57:0 chr12 74615239 i_216 T . PASS END=74615239;SVTYPE=INS;SVINSLEN=249;SVINSSEQ=GTATATGTTTCTCAAATATATATATTCATGTATGTTTCTCAAATATATATATTTATATATGTTTCTCAATATATATATATTTATGTTTCTCAAATATGTATATATTTATATATATGTTTCTCAAATGTATATATTTATATATGTTTCTCAAATATGTATATATTTATATATGTTTCTCAAATATATATATATTTATATATTTCTCAAATATGTATATATTTATATATATTTCTCTAAATATATATATAT TR:VR 51:6 27:0 chr16 66995141 d_800 C . PASS END=66995349;SVTYPE=DEL;SVLEN=-208 TR:VR 31:3 24:0 chr17 83047596 i_511 T . PASS END=83047597;SVTYPE=INS;SVINSLEN=347;SVINSSEQ=AAATCCCTACCAAAGAATATAAAACTTAGGTCTATAATAAATCCCTACCAAAAGAATAAGAAACTTAGGTCTATAATAAATCCCTACCAAATATAAGAAACTTAGGTCTATAATAAATCCTATGCCAAAGAATAAGAAACTTAGGTCTATAATAAATCCTACCAAAAAGAATAAGAAACTTAGGTCTATAATAAATCCTATCAAAGAATAAGAAACTTAGGTCTATAATAAATCCCTACCAAAGAATAAGAAATTTAGGTCTATAATAAATCCCTACCAAAAGAATAAGAACCTAGGTCTATAATCTGATCCTTATCAAAGAACAAGAAATTTAGGGTCTATAATAA TR:VR 41:6 26:0 chr21 33111726 d_1195 A . Too_small_size END=33111761;SVTYPE=DEL;SVLEN=-35 TR:VR 45:15 32:0 chr7 135155758 d_1634 G . PASS END=135159118;SVTYPE=DEL;SVLEN=-3360 TR:VR 33:9 25:0 chr7 81028455 r_326 T . PASS END=81050063;SVTYPE=DEL;SVLEN=-21608 TR:VR 46:21 52:0 chr1 228082143 d_160 C . PASS END=228082201;SVTYPE=DEL;SVLEN=-58 TR:VR 53:10 17:0 chr10 61723457 d_270 T . Too_small_size END=61723492;SVTYPE=DEL;SVLEN=-35 TR:VR 49:22 24:0 chr16 68364740 d_801 C . PASS END=68365036;SVTYPE=DEL;SVLEN=-296 TR:VR 27:10 21:0 chr22 42859803 d_1248 T . PASS END=42874354;SVTYPE=DEL;SVLEN=-14551 TR:VR 56:6 30:0 chr3 194147294 d_1361 T . PASS END=194149399;SVTYPE=DEL;SVLEN=-2105 TR:VR 42:11 30:0 chr5 116872717 d_1485 G . PASS END=116873821;SVTYPE=DEL;SVLEN=-1104 TR:VR 49:6 26:0 chr7 137239712 d_1635 C . PASS END=137239765;SVTYPE=DEL;SVLEN=-53 TR:VR 46:9 29:0 chr7 20668403 i_1098 G . PASS END=20668403;SVTYPE=INS;SVINSLEN=700;SVINSSEQ=CCCGGCCAGTCGCCCCGTCCAGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCAGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCATCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCGGCCGCCCCGTCCGGGAGGTGTGGGGCGCCTCTGCCCGGCCGCCCCTACTAGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCATCCGGGAGGGGGTGGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCAGTCCGGGAGGGAGGTGGGGGGATCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTTGGGGGGTCAGCCCCCCGCCTGGCCAGCCGCCCCTATCCGGGAGGGGGGTGGAGGGGTCAGCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGATCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGATCAGCCCCCCGCC TR:VR 44:5 30:0 chr7 82349172 d_1619 T . PASS END=82349324;SVTYPE=DEL;SVLEN=-152 TR:VR 42:4 28:0 chr8 99262116 r_353 C . Too_low_VAF END=99310996;SVTYPE=DUP;SVLEN=48880 TR:VR 292:13 55:0 chr10 109756542 d_302 T . PASS END=109756675;SVTYPE=DEL;SVLEN=-133 TR:VR 32:10 26:0 chr11 17731616 r_44_0 A ATTCAAATC]chr11:17735004] . PASS SVTYPE=BND;MATEID=r_44_1;SVINSLEN=8;SVINSSEQ=TTCAAATC TR:VR 35:8 45:0 chr11 17735004 r_44_1 G GGATTTGAA]chr11:17731616] . PASS SVTYPE=BND;MATEID=r_44_0;SVINSLEN=8;SVINSSEQ=GATTTGAA TR:VR 35:8 45:0 chr12 19463658 d_366 C . PASS END=19463714;SVTYPE=DEL;SVLEN=-56;SVINSLEN=7;SVINSSEQ=TTAACAT TR:VR 47:10 31:0 chr14 106813543 d_533 C . PASS END=106813651;SVTYPE=DEL;SVLEN=-108 TR:VR 36:4 27:0 chr2 102086700 d_1046 A . PASS END=102086879;SVTYPE=DEL;SVLEN=-179 TR:VR 47:4 31:0 chr2 234377575 d_1087 A . PASS END=234380458;SVTYPE=DEL;SVLEN=-2883 TR:VR 18:12 33:0 chr21 36757686 d_1196 G . Too_small_size END=36757727;SVTYPE=DEL;SVLEN=-41 TR:VR 17:3 21:0 chr22 10722799 d_1208 T . Too_low_VAF END=10722868;SVTYPE=DEL;SVLEN=-69;SVINSLEN=29;SVINSSEQ=ACATTCCGTTCCATTCTGTTCTGTTCCGT TR:VR 138:3 110:0 chr3 90573589 d_1308 A . PASS END=90573702;SVTYPE=DEL;SVLEN=-113;SVINSLEN=112;SVINSSEQ=GAGGTTAAACTCTGTGAGTTGAACGCACACATCACAAAGTAGTTTCTGAGAATAATTCTGTCTAGTTTTCTATGAAGATGTTCCCTTTTCTACCACAGGCCTCAAACCGCTG TR:VR 42:6 14:0 chr5 181095930 d_1519 T . PASS END=181101369;SVTYPE=DEL;SVLEN=-5439 TR:VR 92:6 33:0 chr6 44224836 r_310 G . PASS END=44241064;SVTYPE=DEL;SVLEN=-16228 TR:VR 75:11 40:0 chr7 2084268 r_319 C . Too_low_VAF END=3262004;SVTYPE=DUP;SVLEN=1177736 TR:VR 80:3 44:0 chr7 84395863 d_1620 G . PASS END=84405846;SVTYPE=DEL;SVLEN=-9983 TR:VR 48:15 51:0 chrX 16005343 d_1886 T . PASS END=16006731;SVTYPE=DEL;SVLEN=-1388 TR:VR 34:4 45:0 chrX 66787977 i_1329 T . Too_small_size END=66787977;SVTYPE=INS;SVINSLEN=47;SVINSSEQ=GTGTTTCCATTTGCTTCTGTCCTCTCTTATTTTTCTCACTAACATCC TR:VR 47:7 25:0 chr10 66505764 d_271 C . Too_small_size END=66505801;SVTYPE=DEL;SVLEN=-37 TR:VR 47:5 22:0 chr11 17731722 r_45_0 T [chr11:17736613[G . PASS SVTYPE=BND;MATEID=r_45_1 TR:VR 36:8 46:0 chr11 17736613 r_45_1 G [chr11:17731722[G . PASS SVTYPE=BND;MATEID=r_45_0 TR:VR 36:8 46:0 chr12 7783072 r_57 A . PASS END=16815320;SVTYPE=DEL;SVLEN=-9032248 TR:VR 34:9 49:0 chr2 103521950 d_1047 T . PASS END=103522020;SVTYPE=DEL;SVLEN=-70 TR:VR 35:4 38:0 chr5_GL000208v1_random 20390 i_1028 A . PASS END=20390;SVTYPE=INS;SVINSLEN=219;SVINSSEQ=AAATCTATGAGTTAAATGGACACATCAGAAGCTACTTTCTGACAATGCTTCTTTCTAGATTTTATATAAAGATACTGCCTTTTCTAAAAGAGGCCTTAAAGGGATGCAAATATTTTAAGATATTTCCTTTTCCACCATAGCCATCAAAGTGTTCCAAAGTCCACTTTCAGATTCTACAAAAAGAGTGTTTTAAAGCTGCTCTATCAAAAGGAGTGTTCA TR:VR 69:6 43:0 chr7 138189066 d_1637 A . PASS END=138202263;SVTYPE=DEL;SVLEN=-13197 TR:VR 71:10 36:1 chr7 20862384 r_321 C . PASS END=20892255;SVTYPE=DEL;SVLEN=-29871 TR:VR 51:12 54:0 chr8 51662523 r_342_0 A [chr8:59766336[A . PASS SVTYPE=BND;MATEID=r_342_1 TR:VR 130:15 57:0 chr8 59766336 r_342_1 A [chr8:51662523[A . PASS SVTYPE=BND;MATEID=r_342_0 TR:VR 130:15 57:0 chrX 67202808 d_1904 C . Too_small_size END=67202849;SVTYPE=DEL;SVLEN=-41 TR:VR 43:10 27:0 chr1 146768043 d_117 A . PASS END=146773565;SVTYPE=DEL;SVLEN=-5522 TR:VR 45:10 37:0 chr11 18524784 r_46 C . PASS END=18530033;SVTYPE=DEL;SVLEN=-5249 TR:VR 39:11 25:0 chr16 71360198 d_802 G . PASS END=71360249;SVTYPE=DEL;SVLEN=-51 TR:VR 37:12 32:0 chr17 83215426 d_856 C . PASS END=83215815;SVTYPE=DEL;SVLEN=-389;SVINSLEN=109;SVINSSEQ=GGCACCCGCGTGAGTGCTTAACAAGTTTCCACACCGTGAGCTGCTGAGACGGCACCCGCGTGGAGTGCCGCAGTTTCCCCGCGTGAGCTGCTGAGACGGCACCCGCGTG TR:VR 47:5 21:0 chr2 104933739 d_1048 C . PASS END=104934078;SVTYPE=DEL;SVLEN=-339 TR:VR 42:7 29:0 chr2 236559979 d_1089 C . Too_small_size END=236560016;SVTYPE=DEL;SVLEN=-37 TR:VR 20:12 28:0 chr21 39889558 r_235 A . PASS END=40033871;SVTYPE=DEL;SVLEN=-144313 TR:VR 31:9 62:0 chr7 138202187 d_1638 T . PASS END=138202256;SVTYPE=DEL;SVLEN=-69 TR:VR 58:10 23:0 chr9 111328974 d_1794 G . PASS END=111341128;SVTYPE=DEL;SVLEN=-12154;SVINSLEN=82;SVINSSEQ=GAGGCCAAGGTGGGCGGATCACGAAGTCAGGAGATAGAGACCACGGTGAAACCCCATCTCTACTAAAAATACAAAAAATTAG TR:VR 44:8 49:0 chrX 67451034 d_1905 G . PASS END=67451212;SVTYPE=DEL;SVLEN=-178 TR:VR 41:5 29:0 chr10 67437360 d_272 T . PASS END=67437655;SVTYPE=DEL;SVLEN=-295 TR:VR 41:9 34:0 chr12 83183997 r_69_0 A A]chr12:83188110] . PASS SVTYPE=BND;MATEID=r_69_1 TR:VR 62:33 37:0 chr12 83188110 r_69_1 T T]chr12:83183997] . PASS SVTYPE=BND;MATEID=r_69_0 TR:VR 62:33 37:0 chr16 71933325 d_803 G . Too_small_size END=71933363;SVTYPE=DEL;SVLEN=-38 TR:VR 40:15 26:0 chr19 27865175 r_199 A . PASS END=27870137;SVTYPE=DEL;SVLEN=-4962 TR:VR 45:8 30:0 chr21 39889573 r_234_0 C C]chr21:40028170] . PASS SVTYPE=BND;MATEID=r_234_1 TR:VR 30:3 63:0 chr21 40028170 r_234_1 T T]chr21:39889573] . PASS SVTYPE=BND;MATEID=r_234_0 TR:VR 30:3 63:0 chr5 118737980 d_1486 T . PASS END=118739730;SVTYPE=DEL;SVLEN=-1750 TR:VR 41:4 24:0 chr6 54012048 d_1541 C . PASS END=54012532;SVTYPE=DEL;SVLEN=-484 TR:VR 32:3 21:0 chr9 117429715 r_371_0 T [chr9:117430429[G . PASS SVTYPE=BND;MATEID=r_371_1 TR:VR 36:11 28:0 chr9 117430429 r_371_1 G [chr9:117429715[G . PASS SVTYPE=BND;MATEID=r_371_0 TR:VR 36:11 28:0 chr1 151012987 d_119 C . PASS END=151026033;SVTYPE=DEL;SVLEN=-13046 TR:VR 49:8 22:0 chr1 231799964 r_28_0 T TACTCCCTCCCCTCTTTCTTCCTTCTCCCTTCCTCTCTCCCTTCTTCCCCTCCCTCCCTTCTTTTTTTTCCCATCCTCCTTCCCTTCCTTCCTTACTTCCTTATTTCTCACTCTCCTTCCCTCCCTCCCTCCTTCCCTTCT[chr8:2191100[ . PASS SVTYPE=BND;MATEID=r_28_1;SVINSLEN=140;SVINSSEQ=ACTCCCTCCCCTCTTTCTTCCTTCTCCCTTCCTCTCTCCCTTCTTCCCCTCCCTCCCTTCTTTTTTTTCCCATCCTCCTTCCCTTCCTTCCTTACTTCCTTATTTCTCACTCTCCTTCCCTCCCTCCCTCCTTCCCTTCT TR:VR 132:11 79:1 chr8 2191100 r_28_1 T ]chr1:231799964]AGAAGGGAAGGAGGGAGGGAGGGAAGGAGAGTGAGAAATAAGGAAGTAAGGAAGGAAGGGAAGGAGGATGGGAAAAAAAAGAAGGGAGGGAGGGGAAGAAGGGAGAGAGGAAGGGAGAAGGAAGAAAGAGGGGAGGGAGTT . PASS SVTYPE=BND;MATEID=r_28_0;SVINSLEN=140;SVINSSEQ=AGAAGGGAAGGAGGGAGGGAGGGAAGGAGAGTGAGAAATAAGGAAGTAAGGAAGGAAGGGAAGGAGGATGGGAAAAAAAAGAAGGGAGGGAGGGGAAGAAGGGAGAGAGGAAGGGAGAAGGAAGAAAGAGGGGAGGGAGT TR:VR 132:11 79:1 chr10 69768643 d_273 A . PASS END=69768692;SVTYPE=DEL;SVLEN=-49 TR:VR 45:9 19:0 chr12 83184020 r_70_0 T [chr12:83189663[A . PASS SVTYPE=BND;MATEID=r_70_1 TR:VR 62:33 39:0 chr12 83189663 r_70_1 A [chr12:83184020[A . PASS SVTYPE=BND;MATEID=r_70_0 TR:VR 62:33 39:0 chr16 72814587 d_804 C . Too_small_size END=72814625;SVTYPE=DEL;SVLEN=-38 TR:VR 35:7 33:0 chr2 111084612 d_1050 T . PASS END=111084733;SVTYPE=DEL;SVLEN=-121 TR:VR 37:11 34:0 chr21 40171023 d_1197 A . PASS END=40171076;SVTYPE=DEL;SVLEN=-53 TR:VR 19:8 27:0 chr6 100688852 d_1560 A . PASS END=100689962;SVTYPE=DEL;SVLEN=-1110 TR:VR 26:7 37:0 chr6 54610852 r_311 T . Too_low_VAF END=54679458;SVTYPE=DEL;SVLEN=-68606 TR:VR 81:4 58:0 chr7 142044842 d_1640 T . Too_low_VAF END=142044928;SVTYPE=DEL;SVLEN=-86 TR:VR 62:3 63:0 chr7 23812892 d_1588 T . PASS END=23813297;SVTYPE=DEL;SVLEN=-405 TR:VR 46:15 32:0 chr9 119707431 d_1795 G . PASS END=119708147;SVTYPE=DEL;SVLEN=-716 TR:VR 26:3 31:0 chrX 67475023 d_1907 G . PASS END=67475202;SVTYPE=DEL;SVLEN=-179 TR:VR 33:13 29:0 chr1 151196768 d_120 T . PASS END=151197069;SVTYPE=DEL;SVLEN=-301 TR:VR 30:3 19:0 chr10 72324286 d_274 C . PASS END=72325049;SVTYPE=DEL;SVLEN=-763 TR:VR 28:8 19:0 chr12 124792089 d_415 C . Too_small_size END=124792125;SVTYPE=DEL;SVLEN=-36 TR:VR 41:13 26:0 chr12 24361927 r_60 T . PASS END=24602826;SVTYPE=DUP;SVLEN=240899 TR:VR 78:12 53:0 chr12 85470814 r_71_0 A A[chr3:163178823[ . PASS SVTYPE=BND;MATEID=r_71_1 TR:VR 97:22 52:0 chr3 163178823 r_71_1 T ]chr12:85470814]T . PASS SVTYPE=BND;MATEID=r_71_0 TR:VR 97:22 52:0 chr15 28048097 r_112_0 A [chr15:36397376[GATGGGTTAGAGA . PASS SVTYPE=BND;MATEID=r_112_1;SVINSLEN=12;SVINSSEQ=GATGGGTTAGAG TR:VR 58:4 51:0 chr15 36397376 r_112_1 A [chr15:28048097[CTCTAACCCATCA . PASS SVTYPE=BND;MATEID=r_112_0;SVINSLEN=12;SVINSSEQ=CTCTAACCCATC TR:VR 58:4 51:0 chr6 1070753 d_1523 G . PASS END=1072664;SVTYPE=DEL;SVLEN=-1911 TR:VR 21:10 31:0 chr6 54955635 d_1542 A . PASS END=54956052;SVTYPE=DEL;SVLEN=-417;SVINSLEN=2;SVINSSEQ=CA TR:VR 38:4 32:0 chr7 142450120 r_333 G . Too_low_VAF END=142526501;SVTYPE=DUP;SVLEN=76381 TR:VR 94:3 51:0 chr8 54170938 d_1693 G . PASS END=54173829;SVTYPE=DEL;SVLEN=-2891;SVINSLEN=1;SVINSSEQ=G TR:VR 85:6 34:0 chr9 12245094 d_1768 T . PASS END=12245757;SVTYPE=DEL;SVLEN=-663 TR:VR 26:13 25:0 chr11 31811717 d_335 G . PASS END=31811808;SVTYPE=DEL;SVLEN=-91 TR:VR 32:21 25:0 chr12 126583385 i_231 A . Too_small_size END=126583385;SVTYPE=INS;SVINSLEN=48;SVINSSEQ=GCATTTTCGGGGTATGGGCTCGATGGCCCATAAGGAAGGATGTAACCA TR:VR 65:7 24:0 chr12 85470843 r_72_0 A ]chr3:163178825]TTT . PASS SVTYPE=BND;MATEID=r_72_1;SVINSLEN=2;SVINSSEQ=TT TR:VR 97:30 52:0 chr3 163178825 r_72_1 T TAA[chr12:85470843[ . PASS SVTYPE=BND;MATEID=r_72_0;SVINSLEN=2;SVINSSEQ=AA TR:VR 97:30 52:0 chr15 28606471 r_113_0 C ]chr18:7882838]G . PASS SVTYPE=BND;MATEID=r_113_1 TR:VR 56:4 48:0 chr18 7882838 r_113_1 G G[chr15:28606471[ . PASS SVTYPE=BND;MATEID=r_113_0 TR:VR 56:4 48:0 chr17 26963214 r_179_0 G GTGGCTTTTTGCCCCGACCGCCT[chr7:65112609[ . Too_low_VAF SVTYPE=BND;MATEID=r_179_1;SVINSLEN=22;SVINSSEQ=TGGCTTTTTGCCCCGACCGCCT TR:VR 130:5 83:0 chr7 65112609 r_179_1 T ]chr17:26963214]AGGCGGTCGGGGCAAAAAGCCAT . Too_low_VAF SVTYPE=BND;MATEID=r_179_0;SVINSLEN=22;SVINSSEQ=AGGCGGTCGGGGCAAAAAGCCA TR:VR 130:5 83:0 chr2 112129383 d_1051 A . Too_small_size END=112129425;SVTYPE=DEL;SVLEN=-42 TR:VR 32:11 20:0 chr2 239479421 d_1091 G . PASS END=239479833;SVTYPE=DEL;SVLEN=-412 TR:VR 20:11 24:0 chr20 48901732 d_1152 G . PASS END=48903671;SVTYPE=DEL;SVLEN=-1939 TR:VR 57:8 25:0 chr22 44215902 r_248_0 C C[chr5:86179924[ . PASS SVTYPE=BND;MATEID=r_248_1 TR:VR 71:8 47:0 chr5 86179924 r_248_1 C ]chr22:44215902]C . PASS SVTYPE=BND;MATEID=r_248_0 TR:VR 71:8 47:0 chr5 21500881 d_1453 C . PASS END=21500990;SVTYPE=DEL;SVLEN=-109 TR:VR 25:10 14:0 chr6 10819255 d_1526 C . Too_small_size END=10819297;SVTYPE=DEL;SVLEN=-42 TR:VR 35:10 27:0 chr7 144544924 d_1641 T . PASS END=144545152;SVTYPE=DEL;SVLEN=-228 TR:VR 41:5 26:0 chr7 25702478 r_322 A . PASS END=25719455;SVTYPE=DEL;SVLEN=-16977 TR:VR 47:13 54:0 chr9 122558155 d_1796 A . PASS END=122558501;SVTYPE=DEL;SVLEN=-346 TR:VR 39:6 30:0 chr1 155575770 d_121 T . PASS END=155577008;SVTYPE=DEL;SVLEN=-1238;SVINSLEN=10;SVINSSEQ=TTTTGAGCTC TR:VR 33:14 14:0 chr1 236374908 r_29_0 T T]chr8:64687149] . Too_low_VAF SVTYPE=BND;MATEID=r_29_1 TR:VR 141:3 57:0 chr8 64687149 r_29_1 A A]chr1:236374908] . Too_low_VAF SVTYPE=BND;MATEID=r_29_0 TR:VR 141:3 57:0 chr10 72583576 r_34_0 C CTAATTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGGCTAGGCTGGTGTCGAGCTCCTGACCTCAGGTGATCTGCCTGCCTCGGCCT]chr10:72585455] . PASS SVTYPE=BND;MATEID=r_34_1;SVINSLEN=93;SVINSSEQ=TAATTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGGCTAGGCTGGTGTCGAGCTCCTGACCTCAGGTGATCTGCCTGCCTCGGCCT TR:VR 45:25 26:0 chr10 72585455 r_34_1 G GAGGCCGAGGCAGGCAGATCACCTGAGGTCAGGAGCTCGACACCAGCCTAGCCAACATGGTGAAACCCTGTCTCTACTAAAAATACAAAAATTA]chr10:72583576] . PASS SVTYPE=BND;MATEID=r_34_0;SVINSLEN=93;SVINSSEQ=AGGCCGAGGCAGGCAGATCACCTGAGGTCAGGAGCTCGACACCAGCCTAGCCAACATGGTGAAACCCTGTCTCTACTAAAAATACAAAAATTA TR:VR 45:25 26:0 chr11 34377530 d_336 G . PASS END=34378339;SVTYPE=DEL;SVLEN=-809 TR:VR 25:3 24:0 chr12 2671034 d_360 T . PASS END=2677426;SVTYPE=DEL;SVLEN=-6392;SVINSLEN=5;SVINSSEQ=TTTAA TR:VR 33:7 37:0 chr12 86179941 d_400 C . PASS END=86180595;SVTYPE=DEL;SVLEN=-654 TR:VR 51:6 31:0 chr15 31943115 r_114_0 T T]chr15:34773354] . PASS SVTYPE=BND;MATEID=r_114_1 TR:VR 54:7 54:0 chr15 34773354 r_114_1 G G]chr15:31943115] . PASS SVTYPE=BND;MATEID=r_114_0 TR:VR 54:7 54:0 chr16 74928645 d_806 T . PASS END=74929595;SVTYPE=DEL;SVLEN=-950;SVINSLEN=11;SVINSSEQ=GGAGAACAGGC TR:VR 43:11 31:0 chr17 31526098 r_180_0 C C[chr3:127905507[ . PASS SVTYPE=BND;MATEID=r_180_1 TR:VR 100:8 44:0 chr3 127905507 r_180_1 T ]chr17:31526098]T . PASS SVTYPE=BND;MATEID=r_180_0 TR:VR 100:8 44:0 chr20 50181719 d_1153 G . PASS END=50181797;SVTYPE=DEL;SVLEN=-78 TR:VR 45:4 20:0 chr22 44215940 r_249_0 G ]chr5:86179914]T . PASS SVTYPE=BND;MATEID=r_249_1 TR:VR 71:8 47:0 chr5 86179914 r_249_1 T T[chr22:44215940[ . PASS SVTYPE=BND;MATEID=r_249_0 TR:VR 71:8 47:0 chr5 21683789 d_1454 C . PASS END=21683837;SVTYPE=DEL;SVLEN=-48 TR:VR 44:6 22:0 chr6 56335774 d_1543 A . PASS END=56336578;SVTYPE=DEL;SVLEN=-804 TR:VR 37:15 31:0 chr7 91079215 d_1621 C . Too_small_size END=91079252;SVTYPE=DEL;SVLEN=-37 TR:VR 35:5 40:0 chr8 55911228 i_1172 C . Too_small_size END=55911229;SVTYPE=INS;SVINSLEN=46;SVINSSEQ=GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT TR:VR 63:10 22:0 chr9 125200636 d_1797 C . PASS END=125204092;SVTYPE=DEL;SVLEN=-3456;SVINSLEN=1;SVINSSEQ=C TR:VR 42:6 23:0 chrX 20999483 d_1888 G . PASS END=21003431;SVTYPE=DEL;SVLEN=-3948;SVINSLEN=1;SVINSSEQ=C TR:VR 38:8 36:0 chr1 156201647 d_122 G . Too_small_size END=156201688;SVTYPE=DEL;SVLEN=-41 TR:VR 36:13 28:0 chr10 72583544 r_35_0 G [chr10:72585531[C . PASS SVTYPE=BND;MATEID=r_35_1 TR:VR 46:23 26:0 chr10 72585531 r_35_1 C [chr10:72583544[C . PASS SVTYPE=BND;MATEID=r_35_0 TR:VR 46:23 26:0 chr11 34404223 r_47_0 A A[chr5:161356792[ . PASS SVTYPE=BND;MATEID=r_47_1 TR:VR 67:5 52:0 chr5 161356792 r_47_1 T ]chr11:34404223]T . PASS SVTYPE=BND;MATEID=r_47_0 TR:VR 67:5 52:0 chr13 114231408 i_308 C . PASS END=114231408;SVTYPE=INS;SVINSLEN=279;SVINSSEQ=ATCATGCTGGCGGTGGGGCTGGTGGGAGGTGGTTGGATCGTGGGGGTGAGGTGCCCATTGCTGCTGGCGGTGGTGGTGTTGGTGGTTGGATCGTGGGGGTGGAGTGCCCATTGCTGCTGGAGGTGGGGCTGGTGGGAGGTGGTTCGATCAGTGGGGGAGTGCCCATGCTGGTTGCAGTGCCATGGTGGGGGAGGTGGGTGGATCGTGGGGGTGGAGTGCCCATTGCTGCTGGCGGTGGGGCTGGTGGAGGGCTATGGTTGGATCGTGGGGGTGGCCTTA TR:VR 77:5 27:0 chr16 77583769 r_162_0 C C[chr20:35440742[ . PASS SVTYPE=BND;MATEID=r_162_1 TR:VR 75:12 46:0 chr20 35440742 r_162_1 T ]chr16:77583769]T . PASS SVTYPE=BND;MATEID=r_162_0 TR:VR 75:12 46:0 chr18 10445890 d_897 C . PASS END=10445938;SVTYPE=DEL;SVLEN=-48 TR:VR 26:4 29:0 chr2 113300512 d_1053 T . PASS END=113301206;SVTYPE=DEL;SVLEN=-694 TR:VR 39:6 22:0 chr20 5309100 r_219_0 C C[chr4:54281600[ . PASS SVTYPE=BND;MATEID=r_219_1 TR:VR 58:7 55:0 chr4 54281600 r_219_1 C ]chr20:5309100]C . PASS SVTYPE=BND;MATEID=r_219_0 TR:VR 58:7 55:0 chr6 57246967 d_1544 G . PASS END=57247085;SVTYPE=DEL;SVLEN=-118 TR:VR 41:7 20:0 chr7 147385998 d_1642 T . PASS END=147386895;SVTYPE=DEL;SVLEN=-897 TR:VR 37:7 38:0 chr7 27919158 d_1590 G . PASS END=27919250;SVTYPE=DEL;SVLEN=-92 TR:VR 49:9 24:0 chr7 92141011 d_1622 A . PASS END=92141612;SVTYPE=DEL;SVLEN=-601 TR:VR 41:5 19:0 chr8 141874474 i_1209 G . Too_low_VAF END=141874515;SVTYPE=INS;SVINSLEN=400;SVINSSEQ=AGGGTGATGGGAACTGTGTGTAGGGGAGGGTGAGTGACGGGCACGGTGTATAGGTGAGGGTGATGGGAACTGTGTGTAGGGGGGAGGGAGGTGATGGGCACAGTGGTGATGGGAACTGTGTGAGACGGTGGTGATGGGCACAGTGTGTAGGTGAGGGTGATGGGAACTGTGTGTGGGGGGAGGGTGGTGATGGGTGTATAGGTGAGGGTGATGGGAACTGTGTGTGCGGGGACGGTGGTGATGGGCACAGTGTGTAGGTGAGAGTGATGGGAACTGTGTGTAGGGGGAGGGAGGTGATGGGCACAGTGTGTAGGGGAGAGGTGATGGGCACAGTGTGTGTAGGTGAGGGTGATGGGAACTGTGTAGGGGAGGTGTGATGGGCCTGGTGTGTGCATGGGCA TR:VR 69:3 23:0 chr8 56173097 d_1694 T . Too_small_size;Too_low_VAF END=56173140;SVTYPE=DEL;SVLEN=-43 TR:VR 67:3 24:0 chr9 125882451 d_1798 T . Too_small_size END=125882495;SVTYPE=DEL;SVLEN=-44;SVINSLEN=1;SVINSSEQ=A TR:VR 31:11 41:0 chrX 2167554 d_1877 C . PASS END=2168723;SVTYPE=DEL;SVLEN=-1169 TR:VR 36:9 29:0 chr1 157917739 r_17 C . PASS END=157929478;SVTYPE=DEL;SVLEN=-11739;SVINSLEN=44;SVINSSEQ=TAGGAAAGATTACTTTTCCAATCAAAGGTCCCCAAGGGACCTCC TR:VR 63:21 47:0 chr11 34404233 r_48_0 T [chr5:161357584[T . PASS SVTYPE=BND;MATEID=r_48_1 TR:VR 67:12 52:0 chr5 161357584 r_48_1 T [chr11:34404233[T . PASS SVTYPE=BND;MATEID=r_48_0 TR:VR 67:12 52:0 chr12 31687316 r_61_0 G [chr5:150838021[T . PASS SVTYPE=BND;MATEID=r_61_1 TR:VR 63:7 42:0 chr5 150838021 r_61_1 T [chr12:31687316[T . PASS SVTYPE=BND;MATEID=r_61_0 TR:VR 63:7 42:0 chr12 89597986 d_401 G . PASS END=89598060;SVTYPE=DEL;SVLEN=-74 TR:VR 49:5 25:0 chr14_GL000225v1_random 104909 r_110_0 C [chr14_GL000225v1_random:105923[AAG . Too_low_VAF SVTYPE=BND;MATEID=r_110_1;SVINSLEN=2;SVINSSEQ=AA TR:VR 328:5 277:1 chr14_GL000225v1_random 105923 r_110_1 G [chr14_GL000225v1_random:104909[TTG . Too_low_VAF SVTYPE=BND;MATEID=r_110_0;SVINSLEN=2;SVINSSEQ=TT TR:VR 328:5 277:1 chr14_GL000225v1_random 45185 d_557 A . Too_low_VAF END=45738;SVTYPE=DEL;SVLEN=-553;SVINSLEN=145;SVINSSEQ=CAAAAAGCCTGGAAATGATTTACATCACCTCGGGGATCAGTGCATAGGTATGTCAGAAATCCCCAGTAGGCTGAACCTAGACAAGGGATACATCACTTAGGTGATCAGTGTAGAGATATGTGAAAATTCCCGTGTAGACAGAGCC TR:VR 599:3 485:1 chr15 34640742 r_116_0 T T]chr15:64806440] . PASS SVTYPE=BND;MATEID=r_116_1 TR:VR 74:6 54:0 chr15 64806440 r_116_1 C C]chr15:34640742] . PASS SVTYPE=BND;MATEID=r_116_0 TR:VR 74:6 54:0 chr16 80219194 d_807 A . PASS END=80221224;SVTYPE=DEL;SVLEN=-2030 TR:VR 30:8 37:0 chr17 32105711 d_835 A . Too_small_size END=32105747;SVTYPE=DEL;SVLEN=-36 TR:VR 28:9 24:0 chr20 29284935 i_743 A . Too_low_VAF END=29284935;SVTYPE=INS;SVINSLEN=353;SVINSSEQ=TTGTACAGTAAGACTGTTTCAGAACTGATCAATGAAAAGAAAGGTTCAACTTTGTGCAAGGAATGGACACATCACAAAGAAGTTTCTCAGAGTGCATCTGTCTAGTTATTATGTGAAGACATTTCTTTTACACCATAGGCCTCAAACCGCTCAGCAATATCCTGTTGCAGATTGTACAAAAAGACTGTTTCCAAACTGCTCCATCAAAACAAAGGTTCAACACTGTGAGATGAATGCACACTCTCTTTCTGAGAAACAAAGACTTTTCTCAGAACGCTTCTGTTTAGTTTTTATGTGAAGATATTTCCTTTTTCACCATAGGCCCCAAAGCGCTCCAAATATCCCTTTGCAGA TR:VR 73:3 42:1 chr22 10924573 r_237_0 G ]chr4:189282819]AGGCGAAAGATGTATATA . PASS SVTYPE=BND;MATEID=r_237_1;SVINSLEN=17;SVINSSEQ=AGGCGAAAGATGTATAT TR:VR 24:6 39:0 chr4 189282819 r_237_1 A AATATACATCTTTCGCCT[chr22:10924573[ . PASS SVTYPE=BND;MATEID=r_237_0;SVINSLEN=17;SVINSSEQ=ATATACATCTTTCGCCT TR:VR 24:6 39:0 chr5 24469708 d_1455 G . Too_small_size END=24469748;SVTYPE=DEL;SVLEN=-40;SVINSLEN=5;SVINSSEQ=GAACA TR:VR 28:7 24:0 chr6 120562838 r_315_0 T [chr6:120564209[C . PASS SVTYPE=BND;MATEID=r_315_1 TR:VR 23:6 29:0 chr6 120564209 r_315_1 C [chr6:120562838[C . PASS SVTYPE=BND;MATEID=r_315_0 TR:VR 23:6 29:0 chr7 148199823 d_1643 G . PASS END=148199874;SVTYPE=DEL;SVLEN=-51 TR:VR 32:11 33:0 chr7 97868384 i_1121 G . PASS END=97868384;SVTYPE=INS;SVINSLEN=319;SVINSSEQ=CATTATAGTTTTTTTTTTCTTTTTTGAGACAGAGTCTTGTTCTGTCTTCCAGGCTAAAGTACAGTGGCTCAATCTTGGCTCCCTGCAAGCTCCACCTCCCAGGTTCACACCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGTGCCCACCACCATGCCTGGCTGATATTTTATTTTTGTATTTTTAGTGGAGACGGGGTTTCACCGTGATAGCCAGCATGGCTTCGACCTCCTGACCTCGTGATCCACCCACCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCACCCAGCCAGGTGAT TR:VR 44:3 22:0 chr8 57523547 d_1695 T . PASS END=57523655;SVTYPE=DEL;SVLEN=-108;SVINSLEN=49;SVINSSEQ=ATATTATATATATATGGAGCAATATATATATATATTATATATATATGGA TR:VR 58:3 40:1 chr9 126167331 i_1235 G . PASS END=126167342;SVTYPE=INS;SVINSLEN=132;SVINSSEQ=GTATAATATGTTATACTAATATATTAGTATAACATATACTAATATATTATACAAATATATTTGGGAAATATGGTATAATATGTTATACTAATATATTAGTATAACATATACTAATATATTATACAAATATTA TR:VR 31:5 19:0 chr1 2689186 d_12 C . PASS END=2689689;SVTYPE=DEL;SVLEN=-503;SVINSLEN=63;SVINSSEQ=ATCTGACAGCCTGGAAGAGCACCCTGCATGGCCAGGTGCGCACCTGACAGCCTGGAACAGCAC TR:VR 113:7 59:1 chr10 72602205 i_148 A . PASS END=72602205;SVTYPE=INS;SVINSLEN=179;SVINSSEQ=TTTCCATTCCAACAGCTTCCAGGCTGGTGAACTCATGAAGGCATAAGGAGCCTGGCAGGTCCTTTCCCCTATACCTTGCCCTACGCAACTCTTACATCTGGCTGTTTCTTAGTTTTATCCTTTTAAGATATGCAAGTTATAGGCCAGTCACGGTGGCTCACGCCTGTAATCCCAATAGT TR:VR 44:17 24:0 chr12 91983934 r_73 T . PASS END=91998023;SVTYPE=DEL;SVLEN=-14089 TR:VR 78:7 52:0 chr13 18214300 r_79_0 T [chr22:11035928[ATATGTATTATATATGTCATAAAATAA . Too_low_VAF SVTYPE=BND;MATEID=r_79_1;SVINSLEN=26;SVINSSEQ=ATATGTATTATATATGTCATAAAATA TR:VR 203:3 223:0 chr22 11035928 r_79_1 A [chr13:18214300[TATTTTATGACATATATAATACATATA . Too_low_VAF SVTYPE=BND;MATEID=r_79_0;SVINSLEN=26;SVINSSEQ=TATTTTATGACATATATAATACATAT TR:VR 203:3 223:0 chr15 34643839 d_692 G . PASS END=34643987;SVTYPE=DEL;SVLEN=-148 TR:VR 40:7 25:0 chr17 33523971 d_836 A . PASS END=33524084;SVTYPE=DEL;SVLEN=-113 TR:VR 50:8 25:0 chr20 5532134 r_220_0 G ]chr4:66630624]G . PASS SVTYPE=BND;MATEID=r_220_1 TR:VR 68:9 48:0 chr4 66630624 r_220_1 G G[chr20:5532134[ . PASS SVTYPE=BND;MATEID=r_220_0 TR:VR 68:9 48:0 chr4 49645881 i_945 T . Too_low_VAF END=49645881;SVTYPE=INS;SVINSLEN=292;SVINSSEQ=CAAACCTAGTCAAGACTGGAATGGAATGGAATGGAATGGAACAGAATCAACACGAGTGGAATGGAATGGAATTTAATGGAATGGAATGGAATGGCATGAAATGGAATGGAATGGAATGGAATTGAATGGAAGGGAATAAACACGAGTGGAATGCAATGGAAATGAATGCAATGGAATGGAATGGAATGCACAGTGAAATGGAAAGGAATGGAATCAACCTGAGAGGAATGCAATTGGAATGGAATGGAATGAAGGAAGTTGACTGGAATGGAATGTCCAGTGTAATGGAAAG TR:VR 309:12 156:0 chr5 25352749 d_1456 A . PASS END=25353892;SVTYPE=DEL;SVLEN=-1143 TR:VR 27:3 22:0 chr6 12304309 d_1527 T . PASS END=12304885;SVTYPE=DEL;SVLEN=-576 TR:VR 30:8 25:0 chr7 148784108 r_334_0 G G]chr7:148796329] . PASS SVTYPE=BND;MATEID=r_334_1 TR:VR 55:6 40:0 chr7 148796329 r_334_1 G G]chr7:148784108] . PASS SVTYPE=BND;MATEID=r_334_0 TR:VR 55:6 40:0 chr7 35246706 d_1591 T . PASS END=35248724;SVTYPE=DEL;SVLEN=-2018 TR:VR 37:15 27:0 chr8 100323827 r_354 T . PASS END=100464068;SVTYPE=DUP;SVLEN=140241 TR:VR 283:15 50:0 chr8 60405256 d_1696 A . Too_small_size END=60405292;SVTYPE=DEL;SVLEN=-36 TR:VR 69:51 28:0 chr11 3697540 d_322 T . PASS END=3700140;SVTYPE=DEL;SVLEN=-2600 TR:VR 22:6 25:0 chr12 127318921 d_416 G . PASS END=127319130;SVTYPE=DEL;SVLEN=-209 TR:VR 56:6 28:0 chr15 34729864 r_117 G . PASS END=56289569;SVTYPE=DUP;SVLEN=21559705 TR:VR 69:8 58:0 chr17_GL000205v2_random 16982 d_865 G . Too_small_size;Too_low_VAF END=16960;SVTYPE=INS;SVINSLEN=26;SVINSSEQ=AACAAACATTCAGACCCTCGTAGTAG TR:VR 147:5 107:1 chr2 26333431 r_203_0 A ]chr4:89723827]AGGAGGGTGGGAAGCAC . PASS SVTYPE=BND;MATEID=r_203_1;SVINSLEN=16;SVINSSEQ=AGGAGGGTGGGAAGCA TR:VR 71:4 62:1 chr4 89723827 r_203_1 C CTGCTTCCCACCCTCCT[chr2:26333431[ . PASS SVTYPE=BND;MATEID=r_203_0;SVINSLEN=16;SVINSSEQ=TGCTTCCCACCCTCCT TR:VR 71:4 62:1 chr20 55944009 d_1154 T . PASS END=55944386;SVTYPE=DEL;SVLEN=-377 TR:VR 52:15 33:0 chr3 9126387 d_1281 T . PASS END=9126690;SVTYPE=DEL;SVLEN=-303 TR:VR 43:3 28:0 chr6 123846341 d_1562 T . PASS END=123847064;SVTYPE=DEL;SVLEN=-723 TR:VR 24:6 32:0 chr7 148784121 r_335_0 C [chr7:148797381[ATATGCA . PASS SVTYPE=BND;MATEID=r_335_1;SVINSLEN=6;SVINSSEQ=ATATGC TR:VR 58:8 40:0 chr7 148797381 r_335_1 A [chr7:148784121[GCATATA . PASS SVTYPE=BND;MATEID=r_335_0;SVINSLEN=6;SVINSSEQ=GCATAT TR:VR 58:8 40:0 chr8 100459602 r_355 A . PASS END=105895748;SVTYPE=DEL;SVLEN=-5436146 TR:VR 271:16 55:0 chr8 60981813 d_1697 A . PASS END=60982650;SVTYPE=DEL;SVLEN=-837 TR:VR 76:9 28:0 chr9 126814279 d_1800 A . PASS END=126818754;SVTYPE=DEL;SVLEN=-4475 TR:VR 32:4 45:0 chrX 77313534 d_1910 A . PASS END=77324674;SVTYPE=DEL;SVLEN=-11140 TR:VR 46:7 39:0 chrY 56838873 d_1979 G . Too_low_VAF END=56838876;SVTYPE=INS;SVINSLEN=71;SVINSSEQ=ACATATCTGTGCACTGATCACCCCAGGGAGGAAACACTTGTCTAATCTCTGCCTATAGGAAGTTTACGACT TR:VR 401:3 293:1 chr12 92231966 d_403 T . PASS END=92232064;SVTYPE=DEL;SVLEN=-98 TR:VR 51:12 27:0 chr13 20889068 r_80 C . PASS END=20904644;SVTYPE=DEL;SVLEN=-15576 TR:VR 47:14 43:0 chr15 34766271 r_118 A . PASS END=64180373;SVTYPE=DEL;SVLEN=-29414102 TR:VR 64:9 51:0 chr2 9003847 d_974 T . PASS END=9003958;SVTYPE=DEL;SVLEN=-111 TR:VR 41:17 41:0 chr20 29846269 d_1116 C . PASS END=29846382;SVTYPE=INS;SVINSLEN=113;SVINSSEQ=TTATGTCCTCTTTGAGCAGTTTTGAGTCTCTCTTTTTGTAGAATGTGCAAGTGGATATTTGGAGCCCATTGTGTCCTATGGTAGAAAAGGAAATATCTTCAGATAAAAACTAC TR:VR 103:16 59:0 chr6 133293161 d_1563 T . PASS END=133293661;SVTYPE=DEL;SVLEN=-500 TR:VR 23:9 35:0 chr7 151738348 i_1125 C . PASS END=151738348;SVTYPE=INS;SVINSLEN=103;SVINSSEQ=AGAAGCCAGAGATGCCCAGATCTGCCGGCCCCATGGGGCCTCCATCCACAGAAGCCAGAGATGCCCAGATCTGCCACTCACACGGGGCCTCCATCCCACCAGA TR:VR 34:3 25:0 chr7 38367027 d_1593 A . PASS END=38368051;SVTYPE=DEL;SVLEN=-1024 TR:VR 42:15 35:0 chr8 103995091 d_1726 T . PASS END=103995276;SVTYPE=DEL;SVLEN=-185 TR:VR 122:12 29:0 chr8 61115753 d_1698 T . PASS END=61116341;SVTYPE=DEL;SVLEN=-588 TR:VR 75:24 37:0 chr14_GL000225v1_random 47137 i_347 G . Too_low_VAF END=47137;SVTYPE=INS;SVINSLEN=1693;SVINSSEQ=TGACATGTCACAATGCCCCTGTAGCCATATCCTTGACAAAAGTGACATCACCTGGGTGATCAGTGTGCAGATATGTCACAATGTCTCCAGTAGGCACTGATCACCCCAGGGAAGAAACACTTTTCTACCCTCTGCCTACAGGAGGCTTTATGACTTATCCCTGCACTGATCACTACGTGATGTAACACTTGTCTAGGCTCTGTCTACACGGAATTTTCACATATCTCTACACTGATCACCTAAGTGATGTATCCCTTGTCTAGGGTTCAGCCTACACATGGGGATTTCTGACATACCTATGCACTGATCCCCGAGGTGATGTAAATCATTTCCAGGCTTTTTGTGCAGGTGACATTGTGATATATCTCTTCATTGATCACCCAAATGATGCACATCTTCTCTAGGCTCCGCAGGGAGGGGCATTGTGACATATTTCTGAACTGATCATCCAGAGAGATGTAACTATTCTGCAGGCTTTGACTAAACAGCGTTGGAAGGTTTTGGGAGAGCCTCAGCTGGAATTTCACAGACGGACAAGGGCACAGAGAGGCCAGCGGGCTCCCTTGCATGTCAGCTGGGGTGCGCAATGAGCGCAGGTCTAGCCAGGAGGTCTGCAAAGAGGGCTAGAGGTCTGCGTTCCGCCGCCAGGCTCTCCATGGTGGCAGGTGGGAGGCTGCAGGGGGGCACGGGCGGGCCGGCGACAGTGGCGCGGAGGCGCAGAGGAGGTGAGCCGCCAGAGGGATGTCAGGCCTGGACGCTGTGCGGGCCCGCACGGTGTTTCGTGGGACGGGGGTCTCCACCCAGTCCAGGGGAGGACACATTCTCCCTGGGCTGGGGTTGCTGGTGGGGAGGGGCTGGTCAGGCTGGGGTGTGGTGGTGGAAAGTCATGAGAACTCTGCCCGGGCTGCTCCCACAGTCCAGGCAGCTGCCCGCAAACCCGCACGTGTGCAGTAGGCAGCCCACCTGCTGCTACCTGGGCCGGCTTTGGATCCCCGGGATGCCCAGAAAAGAATGGCAGTTCTCCGCTGCGTGGAGTCTCTCACCAGGCCTAGACCTAGAAGGCAGGAATCCCAGGCTGGTCAGTCTGGTGGAGGGGTCGGGGGAAGACACGCCCCTCCATAGACAGCCAGGTGTTCCCCGCGAAAGAGAGGCCACCGCTCTGCCCTGACCCAACCCCATCCCAACACCACGTCCTAAAGCTCCTCCAGCAGATCCCGGTATTCTTCCTTGCTGAGGGGTGCTTCCAGCGAGATGGCCTCTTCCAAGGCCTCCAGCTGTCCTGGGGCCTCCGTTTCTAGGGAAGGTTGCGCCTGATGCAGAAACTCCGGGCTCGCCAGGAGCTCATCCAGCAGCAGGCTGGAGGGGAGTGCAGACGAGCGCCCCGGCTCCTAGGGAGCGCCTCGGAGGTCGCCGGGTTGCCTTGCATCTGCCCCTGTCGCGCGGAGTCCTCCAGTGGCGAGGGCTGGCGAGGTGCAGCTGCCCAGGCTTGGGGTTCGCACGCCACCCCGGCGACCTGAGGACCCTGGCCCCAGCCCCAACACGGACTCCCCTGGGACGTGGGTGGCACAAGCACACTTTGACCCTGTTGCTCCGCTTGAGTGGGCCCATGCTGTCCCCTGGGCAAGGGCCCTGCAGACCGACGCGCTGTGGGTCCCGGTCCTCCTGGCTTTTGCCCAGTTGCGGAGGTCAACAA TR:VR 560:5 466:0 chr15 34766275 r_119_0 C [chr15:70993598[C . PASS SVTYPE=BND;MATEID=r_119_1 TR:VR 64:6 57:0 chr15 70993598 r_119_1 C [chr15:34766275[C . PASS SVTYPE=BND;MATEID=r_119_0 TR:VR 64:6 57:0 chr2 27630925 d_978 A . PASS END=27630983;SVTYPE=DEL;SVLEN=-58 TR:VR 41:14 25:0 chr22 45362725 r_250 A . PASS END=45377551;SVTYPE=DEL;SVLEN=-14826 TR:VR 55:14 37:0 chr5 33047029 d_1458 T . Too_small_size END=33047064;SVTYPE=DEL;SVLEN=-35 TR:VR 35:13 32:0 chr7 40744632 d_1594 T . Too_small_size END=40744672;SVTYPE=DEL;SVLEN=-40 TR:VR 41:15 32:0 chr8 104687315 d_1727 C . PASS END=104687430;SVTYPE=DEL;SVLEN=-115;SVINSLEN=1;SVINSSEQ=C TR:VR 114:14 26:0 chr8 61130438 d_1699 A . PASS END=61130490;SVTYPE=DEL;SVLEN=-52 TR:VR 71:32 20:0 chrX 79228431 d_1911 A . PASS END=79228595;SVTYPE=DEL;SVLEN=-164 TR:VR 30:9 25:0 chr10 7382591 d_205 G . PASS END=7392711;SVTYPE=DEL;SVLEN=-10120 TR:VR 41:9 30:0 chr15 34974045 r_120 A . PASS END=38626550;SVTYPE=DUP;SVLEN=3652505 TR:VR 52:7 46:0 chr16 85662765 d_809 T . PASS END=85664183;SVTYPE=DEL;SVLEN=-1418 TR:VR 29:10 26:0 chr2 118580407 d_1058 A . PASS END=118580568;SVTYPE=DEL;SVLEN=-161 TR:VR 42:12 25:0 chr2 2928886 d_961 A . Too_small_size END=2928932;SVTYPE=DEL;SVLEN=-46 TR:VR 37:10 41:0 chr8 106040757 d_1728 A . PASS END=106041007;SVTYPE=DEL;SVLEN=-250 TR:VR 152:28 47:0 chr8 62696598 d_1700 A . PASS END=62697089;SVTYPE=DEL;SVLEN=-491 TR:VR 79:15 26:0 chr9 129732983 d_1801 T . PASS END=129733348;SVTYPE=DEL;SVLEN=-365;SVINSLEN=1;SVINSSEQ=G TR:VR 38:26 19:0 chrUn_KI270749v1 96973 d_1857 T . PASS END=97266;SVTYPE=DEL;SVLEN=-293 TR:VR 72:15 56:0 chr1 157917787 d_128 A . PASS END=157929482;SVTYPE=DEL;SVLEN=-11695 TR:VR 63:21 47:0 chr11 46111189 d_337 C . PASS END=46111487;SVTYPE=DEL;SVLEN=-298 TR:VR 31:6 19:0 chr12 128113199 d_417 C . PASS END=128113208;SVTYPE=INS;SVINSLEN=111;SVINSSEQ=TTGCAGGAGTCAGTAAGGTTTCCAAGCACGGAGCTTATACGAGTCAGCAAGGTTTCCAAGCATGGAGCTTACATGAGTCTGCAAGGTTTCCAAGCATGGAGCTTGCATGAG TR:VR 52:21 34:0 chr12 97509631 d_405 C . PASS END=97509961;SVTYPE=DEL;SVLEN=-330 TR:VR 56:8 22:0 chr13 23439964 d_438 C . PASS END=23440125;SVTYPE=DEL;SVLEN=-161 TR:VR 16:10 21:0 chr15 35023222 d_693 T . PASS END=35023530;SVTYPE=DEL;SVLEN=-308 TR:VR 33:16 17:0 chr17_GL000205v2_random 18493 d_867 G . Too_low_VAF END=18592;SVTYPE=INS;SVINSLEN=99;SVINSSEQ=CAGTGTTCTGGAATCTTATCTGACGGACAAATATTCAGACTAGGGAAGGAGTGCTCTAGAACCCTGTGTGAGGTACAATCATTCAGACCGCAGCAGGAC TR:VR 130:4 102:0 chr2 30119366 r_204 G . PASS END=30134985;SVTYPE=DEL;SVLEN=-15619;SVINSLEN=1;SVINSSEQ=T TR:VR 49:8 49:0 chr7 47692438 d_1595 T . PASS END=47696137;SVTYPE=DEL;SVLEN=-3699 TR:VR 51:15 27:0 chr8 62783359 r_343 A . Too_low_VAF END=98386117;SVTYPE=DEL;SVLEN=-35602758;SVINSLEN=3;SVINSSEQ=CCA TR:VR 186:9 59:0 chr10 131850819 i_160 A . PASS END=131850819;SVTYPE=INS;SVINSLEN=191;SVINSSEQ=CACATTTCCTCCTGCCCACACACGCTCACCCACACACACACACTCCACCTGCACACATGACCTCACCCACACACACACCTCACACCCACACACACCTTTCCACCCACACACACCTTTCCACCCATACACACACCTTTCCACCCTGCACACACCTTTCCCACCCACACACACCACCCCTCCACCCCACACAC TR:VR 41:3 21:0 chr10 74752566 d_278 G . PASS END=74755117;SVTYPE=DEL;SVLEN=-2551 TR:VR 55:26 19:0 chr11 46346910 r_49_0 A [chr15:46107622[C . Too_low_VAF SVTYPE=BND;MATEID=r_49_1 TR:VR 61:3 52:0 chr15 46107622 r_49_1 C [chr11:46346910[C . Too_low_VAF SVTYPE=BND;MATEID=r_49_0 TR:VR 61:3 52:0 chr13 103178913 d_465 A . PASS END=103179005;SVTYPE=DEL;SVLEN=-92 TR:VR 54:22 38:0 chr15 35395921 r_121 T . PASS END=38535243;SVTYPE=DUP;SVLEN=3139322 TR:VR 64:13 69:0 chr17 43728133 d_839 A . PASS END=43728203;SVTYPE=DEL;SVLEN=-70 TR:VR 46:8 30:0 chr2 90324572 d_1008 A . PASS END=90324637;SVTYPE=DEL;SVLEN=-65;SVINSLEN=48;SVINSSEQ=GGCTGAGGCGGGCAGGAAAGCCAGGCGCGGCGGGGGGCAAAGAAAGCA TR:VR 55:3 40:1 chr3 116031453 d_1328 A . PASS END=116031753;SVTYPE=DEL;SVLEN=-300 TR:VR 41:22 32:0 chr5 143257893 r_299 T . PASS END=143283506;SVTYPE=DEL;SVLEN=-25613 TR:VR 33:11 40:0 chr8 62945006 d_1701 C . PASS END=62945074;SVTYPE=DEL;SVLEN=-68 TR:VR 60:35 35:0 chr9 133307956 d_1802 G . PASS END=133319202;SVTYPE=DEL;SVLEN=-11246 TR:VR 54:5 33:0 chrX 81606953 d_1912 C . PASS END=81607001;SVTYPE=DEL;SVLEN=-48 TR:VR 29:14 28:0 chr10 74837304 d_279 G . PASS END=74837464;SVTYPE=DEL;SVLEN=-160 TR:VR 39:3 28:0 chr15 35531402 r_122 C . PASS END=63391882;SVTYPE=DEL;SVLEN=-27860480 TR:VR 77:9 63:0 chr16 1971234 d_711 T . PASS END=1971553;SVTYPE=DEL;SVLEN=-319 TR:VR 49:9 15:0 chr3 9372416 d_1282 C . PASS END=9383751;SVTYPE=DEL;SVLEN=-11335 TR:VR 45:5 33:0 chr5 144951450 r_300_0 T TTTTTTTTTTTTTTTTTTT[chr6:113605763[ . PASS SVTYPE=BND;MATEID=r_300_1;SVINSLEN=18;SVINSSEQ=TTTTTTTTTTTTTTTTTT TR:VR 71:6 53:1 chr6 113605763 r_300_1 T ]chr5:144951450]AAAAAAAAAAAAAAAAAAT . PASS SVTYPE=BND;MATEID=r_300_0;SVINSLEN=18;SVINSSEQ=AAAAAAAAAAAAAAAAAA TR:VR 71:6 53:1 chr5 41428622 r_290_0 A AAAAAAAAAAAAAAAAAAAAAAAAAAAA[chr8:110620383[ . Too_low_VAF SVTYPE=BND;MATEID=r_290_1;SVINSLEN=27;SVINSSEQ=AAAAAAAAAAAAAAAAAAAAAAAAAAA TR:VR 183:8 60:1 chr8 110620383 r_290_1 A ]chr5:41428622]TTTTTTTTTTTTTTTTTTTTTTTTTTTA . Too_low_VAF SVTYPE=BND;MATEID=r_290_0;SVINSLEN=27;SVINSSEQ=TTTTTTTTTTTTTTTTTTTTTTTTTTT TR:VR 183:8 60:1 chr8 109600961 r_356 G . Too_low_VAF END=109649184;SVTYPE=DUP;SVLEN=48223 TR:VR 307:4 49:0 chrX 22844169 d_1889 T . PASS END=22844871;SVTYPE=DEL;SVLEN=-702 TR:VR 28:6 28:0 chr1 239531844 d_166 A . PASS END=239537472;SVTYPE=DEL;SVLEN=-5628 TR:VR 77:4 29:0 chr1 3583920 i_18 A . PASS END=3583923;SVTYPE=INS;SVINSLEN=638;SVINSSEQ=CCCGCAGCCACCAGACAACCCACAGCCACCAGACAACCCACAGCCACCAGACAACGACACAGCCACCAGACAACCCACAGCCACCAGACAACGCGGCAGCCACCAGACAAGCAGCGCCAGCCACCAGACAACCCACAGCCACCAGACAACGCGCAGCCACCAGACAACCCGCAGCCACCAGACAACGCGCAGCCACCAGACAACGCGCAGCCACCAGACAACCCGCAGACCACCAGACAACCCACAGCCACCAGACAACCCACAGCCACCAGACAACGCACAGCCACCAGACAACGCACAGCCACCAGACAACGCGCAGCCACCAGACAACCCACAGCCACCAGACAACCCGCAGACCACCAGACAACGCGCAGCCACCAGAACGCGCGCAGCCACCAGACAACCCGCAGCCACCAGACAACCCGGCAGCCACCAGACAACAGCGCAGCCACCAGACAACCCGCAGCCACCAGACAACGCGCAGCCACCAGACAACCCACAGCCACCAGACAACGCGCAGCCACCAGACAACCCACAGCCACCAGACAGCCGCAGCCACCAGACAACGCGCAGCCACCAGACAACGCACAGCCACCAGACAATGCGCAGCCACCAGACAACCCACAGCCACCAGACAA TR:VR 39:13 21:0 chr15 35542272 r_123 A . PASS END=60706436;SVTYPE=DEL;SVLEN=-25164164 TR:VR 70:7 56:0 chr17 44283107 r_181_0 T T]chr17:44288468] . PASS SVTYPE=BND;MATEID=r_181_1 TR:VR 47:6 27:0 chr17 44288468 r_181_1 A A]chr17:44283107] . PASS SVTYPE=BND;MATEID=r_181_0 TR:VR 47:6 27:0 chr2 124405657 d_1059 G . PASS END=124406036;SVTYPE=DEL;SVLEN=-379;SVINSLEN=4;SVINSSEQ=CAAT TR:VR 45:10 21:0 chr22 49270105 r_251 C . PASS END=49466453;SVTYPE=DUP;SVLEN=196348 TR:VR 98:13 60:0 chr3 94038653 d_1316 A . PASS END=94038820;SVTYPE=DEL;SVLEN=-167;SVINSLEN=7;SVINSSEQ=TTAAGAT TR:VR 38:6 27:0 chr5 145994406 d_1490 A . PASS END=145994469;SVTYPE=DEL;SVLEN=-63 TR:VR 29:8 26:0 chr5 44808996 d_1460 C . PASS END=44809441;SVTYPE=DEL;SVLEN=-445 TR:VR 39:12 27:0 chr6 157430065 d_1564 T . PASS END=157430166;SVTYPE=DEL;SVLEN=-101 TR:VR 19:10 38:0 chr7 50608822 d_1597 G . Too_small_size END=50608861;SVTYPE=DEL;SVLEN=-39 TR:VR 24:12 32:0 chr8 1098029 r_336 C . PASS END=1138056;SVTYPE=DEL;SVLEN=-40027 TR:VR 36:18 41:0 chrUn_GL000220v1 116886 d_1820 G . Too_low_VAF END=116951;SVTYPE=DEL;SVLEN=-65;SVINSLEN=61;SVINSSEQ=GGTCCGCCCCCGGGGCCCGCGGTTCCGCGCGGCGCCTCGCCTCGGCCGGCGCCTAACGTGG TR:VR 850:3 868:0 chrX 23109512 d_1890 A . PASS END=23110930;SVTYPE=DEL;SVLEN=-1418 TR:VR 51:15 38:0 chr1 41632079 i_32 G . PASS END=41632088;SVTYPE=INS;SVINSLEN=199;SVINSSEQ=TTTAGGTCTTTCTTTCACCTGAAGTTGATTTTTGTATATGATGTAAGGATCTAGTTTTTTAAAGATAATGAATTGCCTAACATCATTTATTAATCCTTTCTCCAGTGATTTGCAGTGTAGCACAGGTGTTCATATGTATGGGTATGTTTCTTGGATCTGTTTTGTTCCATTGGCTTACATACCTGTTCCTGTGCTGGTA TR:VR 14:5 34:0 chr13 104595644 r_92 T . PASS END=104618156;SVTYPE=DEL;SVLEN=-22512 TR:VR 89:15 53:0 chr15 36427706 r_124_0 G [chr18:7914862[A . PASS SVTYPE=BND;MATEID=r_124_1 TR:VR 48:5 61:0 chr18 7914862 r_124_1 A [chr15:36427706[A . PASS SVTYPE=BND;MATEID=r_124_0 TR:VR 48:5 61:0 chr16 2153426 d_712 G . PASS END=2153865;SVTYPE=DEL;SVLEN=-439 TR:VR 56:8 19:0 chr16 88137662 d_812 T . PASS END=88137980;SVTYPE=DEL;SVLEN=-318 TR:VR 27:9 30:0 chr17 44283158 r_182_0 C [chr17:44288481[C . PASS SVTYPE=BND;MATEID=r_182_1 TR:VR 47:6 27:0 chr17 44288481 r_182_1 C [chr17:44283158[C . PASS SVTYPE=BND;MATEID=r_182_0 TR:VR 47:6 27:0 chr2 124810976 d_1060 C . PASS END=124811991;SVTYPE=DEL;SVLEN=-1015 TR:VR 33:7 31:0 chr2 32845346 d_980 A . PASS END=32846417;SVTYPE=DEL;SVLEN=-1071 TR:VR 34:3 27:0 chr3 120929349 d_1329 A . PASS END=120930119;SVTYPE=DEL;SVLEN=-770;SVINSLEN=1;SVINSSEQ=G TR:VR 47:13 25:0 chr5 14653496 d_1451 C . PASS END=14653550;SVTYPE=DEL;SVLEN=-54 TR:VR 41:12 28:0 chr7 5090256 r_320 C . PASS END=5107585;SVTYPE=DEL;SVLEN=-17329 TR:VR 42:11 47:0 chr1 240413104 d_167 C . Too_small_size END=240413146;SVTYPE=DEL;SVLEN=-42 TR:VR 74:14 35:0 chr1 44935260 d_19 C . PASS END=44940672;SVTYPE=DEL;SVLEN=-5412 TR:VR 18:12 19:0 chr10 81477512 d_280 C . PASS END=81477598;SVTYPE=DEL;SVLEN=-86 TR:VR 32:7 31:0 chr12 130287216 d_420 C . Too_low_VAF END=130287291;SVTYPE=DEL;SVLEN=-75 TR:VR 83:3 44:0 chr13 108941020 r_93 T . PASS END=108950420;SVTYPE=DEL;SVLEN=-9400 TR:VR 100:8 42:0 chr15 36452110 r_125_0 C C]chr15:60784946] . PASS SVTYPE=BND;MATEID=r_125_1 TR:VR 73:5 46:0 chr15 60784946 r_125_1 C C]chr15:36452110] . PASS SVTYPE=BND;MATEID=r_125_0 TR:VR 73:5 46:0 chr16 24901956 d_718 A . PASS END=24905640;SVTYPE=DEL;SVLEN=-3684 TR:VR 42:5 18:0 chr19 34481835 d_935 C . PASS END=34481899;SVTYPE=DEL;SVLEN=-64 TR:VR 23:6 25:0 chr22 12189938 r_239_0 A [chrUn_GL000224v1:17692[T . Too_low_VAF SVTYPE=BND;MATEID=r_239_1 TR:VR 424:4 354:1 chrUn_GL000224v1 17692 r_239_1 T [chr22:12189938[T . Too_low_VAF SVTYPE=BND;MATEID=r_239_0 TR:VR 424:4 354:1 chr4 51107576 r_276_0 T T]chr4:51573168] . Too_low_VAF SVTYPE=BND;MATEID=r_276_1 TR:VR 188:3 116:0 chr4 51573168 r_276_1 T T]chr4:51107576] . Too_low_VAF SVTYPE=BND;MATEID=r_276_0 TR:VR 188:3 116:0 chr5 150166413 d_1491 C . PASS END=150166739;SVTYPE=DEL;SVLEN=-326 TR:VR 27:13 22:0 chr6 159712771 r_316_0 A AG]chr7:158595292] . PASS SVTYPE=BND;MATEID=r_316_1;SVINSLEN=1;SVINSSEQ=G TR:VR 75:4 49:0 chr7 158595292 r_316_1 G GC]chr6:159712771] . PASS SVTYPE=BND;MATEID=r_316_0;SVINSLEN=1;SVINSSEQ=C TR:VR 75:4 49:0 chr6 60416427 d_1551 T . PASS END=60416536;SVTYPE=DEL;SVLEN=-109 TR:VR 46:5 24:0 chr1 240566852 d_168 A . PASS END=240568036;SVTYPE=DEL;SVLEN=-1184 TR:VR 80:36 21:0 chr10 84180839 d_281 C . PASS END=84180915;SVTYPE=DEL;SVLEN=-76 TR:VR 33:15 18:0 chr11 50605463 d_339 G . PASS END=50605793;SVTYPE=DEL;SVLEN=-330 TR:VR 43:6 28:0 chr12 130613953 d_421 G . PASS END=130614004;SVTYPE=DEL;SVLEN=-51;SVINSLEN=1;SVINSSEQ=A TR:VR 65:32 43:0 chr13 32322512 r_81_0 C [chr13:32323452[C . PASS SVTYPE=BND;MATEID=r_81_1 TR:VR 27:4 30:0 chr13 32323452 r_81_1 C [chr13:32322512[C . PASS SVTYPE=BND;MATEID=r_81_0 TR:VR 27:4 30:0 chr15 36585470 r_126_0 T [chr15:54297011[T . PASS SVTYPE=BND;MATEID=r_126_1 TR:VR 58:6 48:0 chr15 54297011 r_126_1 T [chr15:36585470[T . PASS SVTYPE=BND;MATEID=r_126_0 TR:VR 58:6 48:0 chr17 45583235 r_183_0 A [chr9:107775291[G . Too_low_VAF SVTYPE=BND;MATEID=r_183_1 TR:VR 97:4 64:1 chr9 107775291 r_183_1 G [chr17:45583235[G . Too_low_VAF SVTYPE=BND;MATEID=r_183_0 TR:VR 97:4 64:1 chr2 129469281 d_1061 T . PASS END=129471553;SVTYPE=DEL;SVLEN=-2272 TR:VR 41:14 33:0 chr20 61880784 d_1155 G . Too_small_size END=61880827;SVTYPE=DEL;SVLEN=-43 TR:VR 45:5 30:0 chr22 49494270 i_867 A . PASS END=49494316;SVTYPE=INS;SVINSLEN=190;SVINSSEQ=CCCCACCCCCACTCTCCACTGCAGTGTGGAAGGGCTGGGCAGGGGTGTCCGGGGCCGTGGAAGGGGCTGGGCAGGGGTGTCCGGGGCCGTGTGGAAGGGCTGGGCAGGGGGTGTCCGGGGCCGTGTGGAAGAGCTGGGCAGGGGGTGTCCGGGGCCGTGTGGAAGGGCTGGGCAGGGGTGTCCGGGGCCG TR:VR 43:3 32:0 chr3 196570339 d_1373 G . PASS END=196580025;SVTYPE=DEL;SVLEN=-9686;SVINSLEN=144;SVINSSEQ=TGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTAGAGGCATGCGCCTCTAAACCACGCCCGGCTAATTTAATTTTATATTTTTTTAGTAGAGAAGGGGTTTCTTTTTTTTTTTTTCTCTTTTTGAGACAGAGTTTCACTC TR:VR 73:14 28:0 chr5 15093179 d_1452 A . Too_small_size END=15093216;SVTYPE=DEL;SVLEN=-37 TR:VR 35:18 39:0 chr6 161786265 r_317 T . PASS END=162282074;SVTYPE=DEL;SVLEN=-495809 TR:VR 51:8 63:0 chr8 110898680 d_1730 A . Too_low_VAF END=110899237;SVTYPE=DEL;SVLEN=-557 TR:VR 152:4 25:0 chr9 13520179 r_366 A . PASS END=117430398;SVTYPE=DUP;SVLEN=103910219 TR:VR 67:11 54:0 chrX 25779513 d_1891 A . Too_small_size END=25779553;SVTYPE=DEL;SVLEN=-40 TR:VR 42:16 22:0 chrX 93810421 d_1914 T . Too_small_size END=93810463;SVTYPE=DEL;SVLEN=-42 TR:VR 33:4 29:0 chrY 56841231 i_1365 G . Too_low_VAF END=56841231;SVTYPE=INS;SVINSLEN=441;SVINSSEQ=TATTCTCCAGGCTTTGACTTAAGAGCATCGCAAGGTGTTGGGAGAGCCTCAGCCGGAATTTCACAGACAGACAAGGACAAAGAGAGGCCAGCGGGCTGCCTTGCACATCAGCCGGGGTGCGCAATGAGCGCAGGTCTAGCCAGGAGGCTGGCAAAGAGAGCTAGAGGTCTGCGTTCTGCCGCCAGGCGCTCCAAGCCTGGTGGTAGCTGGGAGGCTGCAGGGGCACGGGCGGGCCGACGACGGTGGCTCAGAGGCGCAGAGGAGGTGAGCCGCCGGAGGCGTGTCAGGCCTGGACGCTGCGCGGGCCCAGTGTTTTCATGGGACGGGGGTCTCCACCCTGCCCAGGGGAGGACGCATAGAGCCTTGTATGGGCTACAGCCTAAGCAGGAAGGGCTTTTGCACAGAGAGAAACATTTGTCACCCAGCTTTGAAGAGGAACTT TR:VR 196:6 145:1 chr1 159714230 d_134 C . PASS END=159714348;SVTYPE=DEL;SVLEN=-118 TR:VR 38:15 30:0 chr10 84472120 r_36 A . PASS END=126703564;SVTYPE=DEL;SVLEN=-42231444 TR:VR 62:11 58:0 chr11 54540821 d_340 T . PASS END=54540960;SVTYPE=DEL;SVLEN=-139;SVINSLEN=138;SVINSSEQ=CTCCGAAACTTCTTTGTGATGTTTGCATTCAACTCACAGAGTTGAACGTTCCTTTCATAGTTCAGCTTTGAGACAGTCTTTTGGTAGAATCTGCAGGTGGATATTTGGACCACTGTGAGGCCTTCGTTCGAAACGGGT TR:VR 32:3 24:0 chr13 40394572 d_440 T . PASS END=40394702;SVTYPE=DEL;SVLEN=-130 TR:VR 42:29 27:0 chr15 36587595 r_127 G . PASS END=70469008;SVTYPE=DUP;SVLEN=33881413 TR:VR 67:4 39:0 chr17 45583244 r_184_0 T T]chr9:107778303] . Too_low_VAF SVTYPE=BND;MATEID=r_184_1 TR:VR 96:3 61:1 chr9 107778303 r_184_1 A A]chr17:45583244] . Too_low_VAF SVTYPE=BND;MATEID=r_184_0 TR:VR 96:3 61:1 chr18 2240933 r_193 G . PASS END=2495112;SVTYPE=DUP;SVLEN=254179 TR:VR 57:6 66:0 chr19 35450134 d_936 C . PASS END=35451095;SVTYPE=DEL;SVLEN=-961 TR:VR 22:4 22:0 chr21 7258448 d_1171 T . Too_low_VAF END=7258588;SVTYPE=DEL;SVLEN=-140 TR:VR 180:3 114:1 chr22 49494498 i_868 G . PASS END=49494498;SVTYPE=INS;SVINSLEN=458;SVINSSEQ=GTGGGGTGTCCGTGGGGCCGTGCGGGAAGGGCTGGGCAGGGGTGTCCGGGGCCGTGTGGAAGGGCTGGGCAGGGGTGTCCGGGGCCGGTGTGAAGGGCTGGGCAGGGTGTCCGGGGCCGTGTGGGAAGAGCTGGGCAGGGGTGTCCGGGGCCGTGTGTGGCTGGCATTGGCAGGTGTCCGGGGTCGTGTGCCGTGGAAGGGCTGGGCAGGGTGTCCGGGCCGGTGGAAGGGGTGGGCAGGGGTCCGTGGGCCGGGTCAAAGAGCTGGGCAGGGGTGTCCGGGGCCCTGTGGAAGGGCTGGGCAGGGTGTCCGTGGGCCGTGTGAAGGGCTGGGCAGGGTGTCCGGGAAGGGCTGGGCAGGGGTGTCCGGGGCCGTGTGGAAGGGCTGGGCAGGGTGTCCGGGGCCTCTGTGGAAGGGCTGGGCAGGGGTGCCCGGGCCGTGTGGAAGGGCATGGGCAG TR:VR 43:6 32:0 chr3 129761073 d_1330 C . PASS END=129775192;SVTYPE=DEL;SVLEN=-14119 TR:VR 78:10 43:0 chr4 51914395 r_277 T . PASS END=54432241;SVTYPE=DEL;SVLEN=-2517846 TR:VR 67:5 60:0 chr6 165766006 r_318 G . PASS END=165830410;SVTYPE=DEL;SVLEN=-64404 TR:VR 47:9 55:0 chr8 112402736 d_1731 G . Too_small_size END=112402776;SVTYPE=DEL;SVLEN=-40 TR:VR 140:12 29:0 chr8 65305391 r_344 T . PASS END=65386214;SVTYPE=DUP;SVLEN=80823 TR:VR 141:17 62:0 chr9 136406548 d_1805 C . PASS END=136412133;SVTYPE=DEL;SVLEN=-5585;SVINSLEN=7;SVINSSEQ=GTGACCT TR:VR 29:8 28:0 chrX 94560339 d_1915 A . PASS END=94560419;SVTYPE=DEL;SVLEN=-80 TR:VR 30:9 24:0 chr1 159717849 d_135 A . PASS END=159717912;SVTYPE=DEL;SVLEN=-63 TR:VR 43:16 26:0 chr1 242546992 d_170 C . PASS END=242547730;SVTYPE=DEL;SVLEN=-738;SVINSLEN=1;SVINSSEQ=C TR:VR 75:30 25:0 chr10 87857524 d_282 G . PASS END=87867235;SVTYPE=DEL;SVLEN=-9711 TR:VR 25:13 35:0 chr11 5454291 d_323 T . Too_small_size END=5454327;SVTYPE=DEL;SVLEN=-36 TR:VR 23:7 22:0 chr12 39100155 d_375 T . PASS END=39100878;SVTYPE=DEL;SVLEN=-723;SVINSLEN=3;SVINSSEQ=GAT TR:VR 35:6 26:0 chr13 41828859 r_82_0 T TTTTTTTTTTTTTTT]chr20:2825780] . PASS SVTYPE=BND;MATEID=r_82_1;SVINSLEN=14;SVINSSEQ=TTTTTTTTTTTTTT TR:VR 53:3 47:1 chr20 2825780 r_82_1 A AAAAAAAAAAAAAAA]chr13:41828859] . PASS SVTYPE=BND;MATEID=r_82_0;SVINSLEN=14;SVINSSEQ=AAAAAAAAAAAAAA TR:VR 53:3 47:1 chr14 20236907 i_325 T . PASS END=20236907;SVTYPE=INS;SVINSLEN=274;SVINSSEQ=ATATTACACGTGCTTTATATAAAATATATACCATATATTACACGTGGCACATATAAATATATACTATATATTACACGTGGCACATATAAAATATATACCACATATTACACGTGGCACATATAAAATATATACCACATATTACACGTGGCACATATAAAATATATACCACATATTACACGTGGCACATATAAAATATATACCACATATTACACGTGGCATTTATATAAAATATATACCACATATTACACGTGGCACATATAAAATATATACCACA TR:VR 46:5 36:1 chr15 36593674 r_128_0 C CCC]chr20:55518460] . PASS SVTYPE=BND;MATEID=r_128_1;SVINSLEN=2;SVINSSEQ=CC TR:VR 98:5 55:0 chr20 55518460 r_128_1 A AGG]chr15:36593674] . PASS SVTYPE=BND;MATEID=r_128_0;SVINSLEN=2;SVINSSEQ=GG TR:VR 98:5 55:0 chr17 46482194 d_840 A . PASS END=46482245;SVTYPE=DEL;SVLEN=-51 TR:VR 60:7 35:1 chr18 22661024 d_903 T . PASS END=22661456;SVTYPE=DEL;SVLEN=-432 TR:VR 36:7 19:0 chr19 37047955 d_937 C . PASS END=37048013;SVTYPE=DEL;SVLEN=-58 TR:VR 38:6 23:0 chr2 130168927 d_1063 C . PASS END=130169118;SVTYPE=DEL;SVLEN=-191 TR:VR 36:18 25:0 chr4 54432216 r_278_0 T T]chr4:54432421] . PASS SVTYPE=BND;MATEID=r_278_1 TR:VR 32:5 36:0 chr4 54432421 r_278_1 C C]chr4:54432216] . PASS SVTYPE=BND;MATEID=r_278_0 TR:VR 32:5 36:0 chr7 54348958 d_1598 A . Too_small_size END=54348999;SVTYPE=DEL;SVLEN=-41 TR:VR 44:9 35:0 chr8 112562526 r_357 G . PASS END=112598649;SVTYPE=DEL;SVLEN=-36123 TR:VR 258:21 51:0 chr9 137328062 i_1240 T . PASS END=137328062;SVTYPE=INS;SVINSLEN=1251;SVINSSEQ=AAAAACAACTAATATACTCCCATATGATGAGTAAAAACAACTAATATACACCCATATGATGAGTAAAAACAACGAATAAACACCTGACATGATGAGTAAAAACAACGAATATACACCAATATGATGAGTAAAACAATTAATATACTCCCATATGATGAGTAAAAACAACAAATATACACCCACATGATGAGTAAAAACAACTAATATACACCTACATGATGCGTAAAAACAACGACGAACAAACACCCACGTGATGAGTAAAAACAACTAATATACACCCATATCATGAGTAAAAACAACTAATATACTCCCATATGATGAGTAAAAACAACTAATATACACCCACATGATGAGTAAAAACAACGAATAAACACCCACATGATGAGTAAAAACAATGAATATACACCCACATGAGTAAAAACAACTAATATACTCCCATATGACGAGTAAAAACAACAGAAGAATATACACCCACATGATGAGTAAAAACAACAAACACCCACATGATGAGTAAAAACAACTAATATACTCCCACATGATGAGTAAAAACAACTAATATACTCTCATATGATGAGTAAAAACAACTAATATACACCCACATGATGAGTAAAACAACTAATATACTCCCATATAATGAGTAAAACAACTAATATACTCCCATATGATGAGTAAAAACAATGAATATACACCCACATGATGAGTAAAAACAACTAATATACTCCCCATATGATGAGTAAAAACAACAAGTACACACCCACATGATGAGTAAAAACAACTAATATACTCCCATATGATGAGTAAAAACAACAAATACACACCCACATGATGAGTAAAAACAACTAATATACACCAATATGATGAGTAAAAACAACTAATATACTCCCATATGATGAGTAAAAACAACGAATAAACACCCACATGATGAGTAAAAACAACTAATATACACCCATATGATGAGTAAAAACAACTAATATACTCCAATATGATGAGTAAAAACAACTAATATACACCCACATGATGAGTAAAAACAACTAATATACACCCATATGATGAGTAAAAACAACGAATATACTCCCACATGATGAATAAAAACAATGAATAAACACCCACATGATGAGTAAAAACAACTAATATACTCCCATATGCTGAGTAAAACAACTAATATACTCCTACATACTGATGAGTAAAAACAACTAATATAATCACATATGATGAGTAAAAACAACGAATAAACACCCACATGATGAGTAA TR:VR 45:3 22:0 chrX 96318631 d_1916 G . PASS END=96319341;SVTYPE=DEL;SVLEN=-710 TR:VR 32:15 32:0