##fileformat=VCFv4.3 ##fileDate=20230328 ##source=nanomonsv-0.5.0 ##reference=/projects/jfan_prj/jfan_prj/Nanopore_Testing/2021_nanopore_sv_testing/scratch/depth_testing/POG/COLO829/hg38_no_alt.fa ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##FILTER= ##FILTER= ##FILTER= ##FILTER= ##FILTER= ##FILTER= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##ALT= ##ALT= ##ALT= ##FORMAT= ##FORMAT= #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT TUMOR CONTROL chr1 113634960 r_7 G . PASS END=113727924;SVTYPE=DUP;SVLEN=92964 TR:VR 37:3 23:0 chr10 82170673 r_80_0 T T]chr6:136065717] . PASS SVTYPE=BND;MATEID=r_80_1 TR:VR 69:26 17:0 chr6 136065717 r_80_1 T T]chr10:82170673] . PASS SVTYPE=BND;MATEID=r_80_0 TR:VR 69:26 17:0 chr11 78121468 r_161 C . PASS END=80339642;SVTYPE=DUP;SVLEN=2218174 TR:VR 146:12 25:0 chr12 40300926 r_225_0 G G]chr17:55528633] . PASS SVTYPE=BND;MATEID=r_225_1 TR:VR 242:20 41:0 chr17 55528633 r_225_1 G G]chr12:40300926] . PASS SVTYPE=BND;MATEID=r_225_0 TR:VR 242:20 41:0 chr14 23348237 d_301 A . Too_small_size END=23348277;SVTYPE=DEL;SVLEN=-40 TR:VR 74:8 19:0 chr14 50986741 r_361_0 G [chr17:60159951[G . Too_low_VAF SVTYPE=BND;MATEID=r_361_1 TR:VR 334:5 24:0 chr17 60159951 r_361_1 G [chr14:50986741[G . Too_low_VAF SVTYPE=BND;MATEID=r_361_0 TR:VR 334:5 24:0 chr17 67270162 i_318 A . PASS END=67270203;SVTYPE=INS;SVINSLEN=118;SVINSSEQ=CAGGGTTTTGATATGTTGCCCAGGCTGGTCTCTAACTCCTGGGCTCAAGCGATCCGCTAGCCTTGGCCTCCCAAATTGCTGGGATTACGGGCATGAGCCACCACACCCAGCCTTTTTT TR:VR 87:22 18:0 chr19 54236073 r_515_0 C [chr19:54596699[C . PASS SVTYPE=BND;MATEID=r_515_1 TR:VR 82:16 34:0 chr19 54596699 r_515_1 C [chr19:54236073[C . PASS SVTYPE=BND;MATEID=r_515_0 TR:VR 82:16 34:0 chr5 66937840 r_603 T . PASS END=67020236;SVTYPE=DUP;SVLEN=82396 TR:VR 50:5 28:0 chr6 141365051 r_690_0 A [chr6:141365201[G . PASS SVTYPE=BND;MATEID=r_690_1 TR:VR 53:6 23:0 chr6 141365201 r_690_1 G [chr6:141365051[G . PASS SVTYPE=BND;MATEID=r_690_0 TR:VR 53:6 23:0 chr6 67802750 r_635_0 A [chr6:132797361[A . PASS SVTYPE=BND;MATEID=r_635_1 TR:VR 42:6 28:0 chr6 132797361 r_635_1 A [chr6:67802750[A . PASS SVTYPE=BND;MATEID=r_635_0 TR:VR 42:6 28:0 chr8 29259757 r_718 C . PASS END=29460000;SVTYPE=DUP;SVLEN=200243 TR:VR 50:5 37:0 chr1 114031823 r_8_0 A ]chr6:145591034]C . PASS SVTYPE=BND;MATEID=r_8_1 TR:VR 62:7 38:0 chr6 145591034 r_8_1 C C[chr1:114031823[ . PASS SVTYPE=BND;MATEID=r_8_0 TR:VR 62:7 38:0 chr10 84558570 r_81_0 T T]chr10:107347149] . PASS SVTYPE=BND;MATEID=r_81_1 TR:VR 43:9 41:0 chr10 107347149 r_81_1 T T]chr10:84558570] . PASS SVTYPE=BND;MATEID=r_81_0 TR:VR 43:9 41:0 chr11 78126955 r_162_0 A A[chr13:20980181[ . PASS SVTYPE=BND;MATEID=r_162_1 TR:VR 84:11 26:0 chr13 20980181 r_162_1 T ]chr11:78126955]T . PASS SVTYPE=BND;MATEID=r_162_0 TR:VR 84:11 26:0 chr12 40489674 d_255 T . PASS END=40489824;SVTYPE=DEL;SVLEN=-150 TR:VR 72:4 16:0 chr12 90676524 r_272 T . PASS END=90746051;SVTYPE=DUP;SVLEN=69527 TR:VR 73:10 34:0 chr14 23350138 r_301_0 T T]chr14:23697961] . PASS SVTYPE=BND;MATEID=r_301_1 TR:VR 93:42 33:0 chr14 23697961 r_301_1 C C]chr14:23350138] . PASS SVTYPE=BND;MATEID=r_301_0 TR:VR 93:42 33:0 chr14 51092954 r_362_0 T ]chr17:63331041]A . PASS SVTYPE=BND;MATEID=r_362_1 TR:VR 110:7 18:0 chr17 63331041 r_362_1 A A[chr14:51092954[ . PASS SVTYPE=BND;MATEID=r_362_0 TR:VR 110:7 18:0 chr14_GL000225v1_random 92225 d_354 A . Too_low_VAF END=93375;SVTYPE=DEL;SVLEN=-1150;SVINSLEN=471;SVINSSEQ=TGTAACTCTGGTCTAAGCTCTGCCTAAAGGGGCATTGTGACATATCTCTGCACTGATCACCCAGGTGATGTAACACTTGTCTAGGCTCTGCCTAAGGGGGCCTTGTCACATATCTCTGCACTGATCACCCAGGTGATGTAACTCTTGTCTAGGCTCTGCTTACAGGGGATATTGTGACATATCTCTGCACTGATCACCTAGGTGATGTAACACTTCTAGGTCTCTGCCTACAGGGGGCATTGTGACATATCTCTGCACTGATAACTGAGGTGATGTAACTCTTGTCTAGGCTGTGCCTACAGGGGAGATTGAGACATATCTCTGCACTGATCACCCAGGTGATCCTGACTCTTGCCTGGTCTCTGCCTACTGGGGACATTGTGACATATCTCTGCACTGATCTCCCAGGTGCTGTAACTTTTGTCTAGGCTCTGCCTACACGGCATTGTGACATATCTCTGCACTGATCAC TR:VR 640:3 586:1 chr17 53643536 r_439 G . PASS END=55318664;SVTYPE=DUP;SVLEN=1675128 TR:VR 52:18 41:0 chr17 67384085 r_487_0 T ]chr5:128045904]T . Too_low_VAF SVTYPE=BND;MATEID=r_487_1 TR:VR 107:3 24:0 chr5 128045904 r_487_1 T T[chr17:67384085[ . Too_low_VAF SVTYPE=BND;MATEID=r_487_0 TR:VR 107:3 24:0 chr18 65592496 r_503 G . PASS END=65671159;SVTYPE=DUP;SVLEN=78663 TR:VR 90:6 27:0 chr2 203388866 r_535 A . PASS END=203460698;SVTYPE=DEL;SVLEN=-71832 TR:VR 36:6 24:0 chr5 178009139 r_615 A . PASS END=178168239;SVTYPE=DUP;SVLEN=159100 TR:VR 47:6 37:0 chr5 67584537 r_604 G . PASS END=87654110;SVTYPE=DEL;SVLEN=-20069573 TR:VR 56:5 32:0 chr6 68715312 r_636 T . PASS END=68788000;SVTYPE=DUP;SVLEN=72688 TR:VR 86:16 31:0 chr8 3036480 d_863 T . PASS END=3036926;SVTYPE=DEL;SVLEN=-446 TR:VR 16:3 16:0 chrY 11323654 i_894 T . Too_low_VAF END=11323655;SVTYPE=INS;SVINSLEN=570;SVINSSEQ=GTCACCAAGAGCTCCTGTGAGCAGATCCTAGACAAGAGTTCCATCACCTGGGTGATCAGTGCAGAGATATGTCACAATGTCCCCTGTAGGGCAAAGCCTGAGAGCAAGAGTTACATCACATGAGTGATCAGTGCAGTGATATGTCACAATGTCCCCTGTAGGCAAGAGCCTAAGACAAGAGTTACATCACCTGGGTGATCAGTGCAGAGATATGTCTCTCAAAGCCCCCTGTAGGCAGAGCCTAGGGATAAAAGCCCCATCTGACCTGGGTGATCAGTGCAGAGATATGTCACAAAGTCCCTGGTAGGCAGAGCCTAGACAAGAGTTACATCACCTGGAGTGATCAGTGTGCAAGGATATGTCACAATGCCCCTGTAGGACAGAGCCTAGACAAAAGTCACATCACCTGGGTGATCAGTGCAGAGATATGTCACAATGCCCCCTTTAGGCAGAGCCTAGACAAGGGTTACATCACCTGGGTGATCAGTGCAGAGATATGTCACAGCATGCCCCTGTAGGCAGAGCCTAGACAAGAGTTACATCACCTGGGTGATCAGTGCAAAGATATGT TR:VR 376:3 327:1 chr1 114038045 r_9_0 T T[chr10:75006097[ . Too_low_VAF SVTYPE=BND;MATEID=r_9_1 TR:VR 148:7 36:0 chr10 75006097 r_9_1 G ]chr1:114038045]G . Too_low_VAF SVTYPE=BND;MATEID=r_9_0 TR:VR 148:7 36:0 chr10 45213280 r_29_0 A [chr12:77262035[C . PASS SVTYPE=BND;MATEID=r_29_1 TR:VR 62:10 27:0 chr12 77262035 r_29_1 C [chr10:45213280[C . PASS SVTYPE=BND;MATEID=r_29_0 TR:VR 62:10 27:0 chr11 69027710 r_99 T . PASS END=70372753;SVTYPE=DUP;SVLEN=1345043 TR:VR 162:51 40:0 chr11 78202266 r_163_0 A [chr13:28809151[T . PASS SVTYPE=BND;MATEID=r_163_1 TR:VR 111:14 33:0 chr13 28809151 r_163_1 T [chr11:78202266[T . PASS SVTYPE=BND;MATEID=r_163_0 TR:VR 111:14 33:0 chr14 23692952 r_302 A . PASS END=34665045;SVTYPE=DUP;SVLEN=10972093 TR:VR 119:43 23:0 chr14 51254185 r_363 T . Too_low_VAF END=51712666;SVTYPE=DUP;SVLEN=458481 TR:VR 132:5 41:0 chr17 53693764 r_440 A . PASS END=55332221;SVTYPE=DEL;SVLEN=-1638457 TR:VR 59:15 40:0 chr17 67570396 r_488_0 G [chr17:68461874[A . PASS SVTYPE=BND;MATEID=r_488_1 TR:VR 174:44 30:0 chr17 68461874 r_488_1 A [chr17:67570396[A . PASS SVTYPE=BND;MATEID=r_488_0 TR:VR 174:44 30:0 chr18 74218779 i_351 A . PASS END=74218779;SVTYPE=INS;SVINSLEN=541;SVINSSEQ=TAAAGATATATATTATATATAGTATATATAATATATAATATATATATATATATAGTATATATATAATATATACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGTAT TR:VR 43:3 16:0 chr5 67587110 r_605_0 A [chr5:83429258[A . PASS SVTYPE=BND;MATEID=r_605_1 TR:VR 63:12 34:0 chr5 83429258 r_605_1 A [chr5:67587110[A . PASS SVTYPE=BND;MATEID=r_605_0 TR:VR 63:12 34:0 chr6 141395720 r_691_0 G [chr6:145194926[A . PASS SVTYPE=BND;MATEID=r_691_1 TR:VR 100:9 36:0 chr6 145194926 r_691_1 A [chr6:141395720[A . PASS SVTYPE=BND;MATEID=r_691_0 TR:VR 100:9 36:0 chr6 68720201 r_637 T . PASS END=96616624;SVTYPE=DEL;SVLEN=-27896423;SVINSLEN=1;SVINSSEQ=C TR:VR 66:18 21:0 chr8 40347243 r_719 T . PASS END=89888821;SVTYPE=DEL;SVLEN=-49541578 TR:VR 45:4 32:0 chr9 6413820 r_728 G . PASS END=6602564;SVTYPE=DUP;SVLEN=188744 TR:VR 44:4 31:0 chr10 45647634 r_30_0 A ]chr12:67959281]TAATCCAAGATAATATTTTTAATTGTAGTGC . PASS SVTYPE=BND;MATEID=r_30_1;SVINSLEN=30;SVINSSEQ=TAATCCAAGATAATATTTTTAATTGTAGTG TR:VR 102:7 30:0 chr12 67959281 r_30_1 C CCACTACAATTAAAAATATTATCTTGGATTA[chr10:45647634[ . PASS SVTYPE=BND;MATEID=r_30_0;SVINSLEN=30;SVINSSEQ=CACTACAATTAAAAATATTATCTTGGATTA TR:VR 102:7 30:0 chr10 99840608 r_82_0 C C[chr16:79830899[ . PASS SVTYPE=BND;MATEID=r_82_1 TR:VR 49:4 36:0 chr16 79830899 r_82_1 C ]chr10:99840608]C . PASS SVTYPE=BND;MATEID=r_82_0 TR:VR 49:4 36:0 chr11 69052190 r_100_0 A A]chr11:77900843] . PASS SVTYPE=BND;MATEID=r_100_1 TR:VR 144:9 30:0 chr11 77900843 r_100_1 A A]chr11:69052190] . PASS SVTYPE=BND;MATEID=r_100_0 TR:VR 144:9 30:0 chr11 78210011 r_164_0 T [chr13:21301655[TT . PASS SVTYPE=BND;MATEID=r_164_1;SVINSLEN=1;SVINSSEQ=T TR:VR 96:11 33:0 chr13 21301655 r_164_1 T [chr11:78210011[AT . PASS SVTYPE=BND;MATEID=r_164_0;SVINSLEN=1;SVINSSEQ=A TR:VR 96:11 33:0 chr14 26283097 r_303_0 G ]chr17:55737973]T . Too_low_VAF SVTYPE=BND;MATEID=r_303_1 TR:VR 185:5 27:0 chr17 55737973 r_303_1 T T[chr14:26283097[ . Too_low_VAF SVTYPE=BND;MATEID=r_303_0 TR:VR 185:5 27:0 chr14 51267607 r_364_0 T ]chr17:55704641]A . Too_low_VAF SVTYPE=BND;MATEID=r_364_1 TR:VR 242:6 24:0 chr17 55704641 r_364_1 A A[chr14:51267607[ . Too_low_VAF SVTYPE=BND;MATEID=r_364_0 TR:VR 242:6 24:0 chr17 53699709 r_441_0 T [chr17:55309421[T . PASS SVTYPE=BND;MATEID=r_441_1 TR:VR 55:11 42:0 chr17 55309421 r_441_1 T [chr17:53699709[T . PASS SVTYPE=BND;MATEID=r_441_0 TR:VR 55:11 42:0 chr17 67589347 r_489_0 A A]chr17:67595272] . PASS SVTYPE=BND;MATEID=r_489_1 TR:VR 124:51 18:0 chr17 67595272 r_489_1 C C]chr17:67589347] . PASS SVTYPE=BND;MATEID=r_489_0 TR:VR 124:51 18:0 chr2 211740827 r_536 G . PASS END=212903563;SVTYPE=DUP;SVLEN=1162736 TR:VR 42:12 32:0 chr5 67607552 r_606_0 G G]chr5:72767980] . PASS SVTYPE=BND;MATEID=r_606_1 TR:VR 57:9 33:0 chr5 72767980 r_606_1 T T]chr5:67607552] . PASS SVTYPE=BND;MATEID=r_606_0 TR:VR 57:9 33:0 chr6 141576447 r_692 T . PASS END=145811803;SVTYPE=DEL;SVLEN=-4235356 TR:VR 105:7 29:0 chr6 68780874 i_686 T . PASS END=68780874;SVTYPE=INS;SVINSLEN=162;SVINSSEQ=TCACAATTATGTGAAACATAATTGTGATAGAGTAGCCTATGAAGAGCCATGAGGCCAGATTTTGGAGGTGAACTAATGGAGAGCCAGTAAAGGCTGCTGAGCAAGATGAAGGCAAGCGCATTTCATATTCCTAGGGACATGTATGATATTTAATTTATTAAT TR:VR 58:19 20:0 chr8 42233207 r_720 G . PASS END=42399650;SVTYPE=DUP;SVLEN=166443 TR:VR 53:9 25:0 chr9 91789728 r_732 A . PASS END=92253710;SVTYPE=DUP;SVLEN=463982 TR:VR 61:8 28:0 chr1 69090253 r_3_0 G [chr1:69090689[T . PASS SVTYPE=BND;MATEID=r_3_1 TR:VR 22:3 18:0 chr1 69090689 r_3_1 T [chr1:69090253[T . PASS SVTYPE=BND;MATEID=r_3_0 TR:VR 22:3 18:0 chr10 45703603 d_203 T . PASS END=45706152;SVTYPE=DEL;SVLEN=-2549 TR:VR 28:18 14:0 chr11 105457392 d_225 C . PASS END=105457632;SVTYPE=DEL;SVLEN=-240 TR:VR 18:6 14:0 chr11 78254387 r_165_0 G ]chr17:57132833]T . Too_low_VAF SVTYPE=BND;MATEID=r_165_1 TR:VR 223:7 34:0 chr17 57132833 r_165_1 T T[chr11:78254387[ . Too_low_VAF SVTYPE=BND;MATEID=r_165_0 TR:VR 223:7 34:0 chr14 26286904 r_304_0 C ]chr17:64281544]C . PASS SVTYPE=BND;MATEID=r_304_1 TR:VR 109:17 36:0 chr17 64281544 r_304_1 C C[chr14:26286904[ . PASS SVTYPE=BND;MATEID=r_304_0 TR:VR 109:17 36:0 chr14 51544611 r_365_0 A A]chr17:61739631] . Too_low_VAF SVTYPE=BND;MATEID=r_365_1 TR:VR 329:4 30:0 chr17 61739631 r_365_1 A A]chr14:51544611] . Too_low_VAF SVTYPE=BND;MATEID=r_365_0 TR:VR 329:4 30:0 chr17 53706268 r_442_0 A [chr17:55391931[A . PASS SVTYPE=BND;MATEID=r_442_1 TR:VR 234:179 46:0 chr17 55391931 r_442_1 A [chr17:53706268[A . PASS SVTYPE=BND;MATEID=r_442_0 TR:VR 234:179 46:0 chr17 68065746 r_490_0 T T]chr17:68472204] . PASS SVTYPE=BND;MATEID=r_490_1 TR:VR 126:30 27:0 chr17 68472204 r_490_1 T T]chr17:68065746] . PASS SVTYPE=BND;MATEID=r_490_0 TR:VR 126:30 27:0 chr18 74770390 r_504 C . PASS END=74832768;SVTYPE=DEL;SVLEN=-62378 TR:VR 62:5 34:0 chr6 141865642 i_697 G . Too_small_size END=141865642;SVTYPE=INS;SVINSLEN=37;SVINSSEQ=TGAGAATCGCTTGAACCCGGGAGGTGGAGGTTGCAAT TR:VR 74:10 24:0 chr6 69233400 r_638 A . PASS END=71480238;SVTYPE=DUP;SVLEN=2246838;SVINSLEN=1;SVINSSEQ=C TR:VR 60:5 33:0 chr9 92541231 r_733 C . PASS END=92643724;SVTYPE=DUP;SVLEN=102493 TR:VR 52:8 21:0 chr1 72350832 r_4 C . PASS END=72426948;SVTYPE=DUP;SVLEN=76116 TR:VR 48:10 19:0 chr10 46104029 r_31_0 C ]chr17:81274814]AGG . PASS SVTYPE=BND;MATEID=r_31_1;SVINSLEN=2;SVINSSEQ=AG TR:VR 56:6 26:0 chr17 81274814 r_31_1 G GCT[chr10:46104029[ . PASS SVTYPE=BND;MATEID=r_31_0;SVINSLEN=2;SVINSSEQ=CT TR:VR 56:6 26:0 chr11 69323436 r_101 T . Too_low_VAF END=69400299;SVTYPE=DUP;SVLEN=76863 TR:VR 179:6 31:0 chr11 78254634 r_166 A . PASS END=78256940;SVTYPE=DEL;SVLEN=-2306 TR:VR 104:7 23:0 chr12 40586975 r_226_0 T T]chr17:67570395] . PASS SVTYPE=BND;MATEID=r_226_1 TR:VR 172:30 33:0 chr17 67570395 r_226_1 T T]chr12:40586975] . PASS SVTYPE=BND;MATEID=r_226_0 TR:VR 172:30 33:0 chr14 26417252 r_305_0 T [chr17:60637355[T . Too_low_VAF SVTYPE=BND;MATEID=r_305_1 TR:VR 329:13 28:0 chr17 60637355 r_305_1 T [chr14:26417252[T . Too_low_VAF SVTYPE=BND;MATEID=r_305_0 TR:VR 329:13 28:0 chr14 52156385 r_366_0 G G]chr17:60523459] . PASS SVTYPE=BND;MATEID=r_366_1 TR:VR 343:32 31:0 chr17 60523459 r_366_1 C C]chr14:52156385] . PASS SVTYPE=BND;MATEID=r_366_0 TR:VR 343:32 31:0 chr17 54507469 r_443 C . PASS END=61989426;SVTYPE=DUP;SVLEN=7481957 TR:VR 314:257 39:0 chr5 179568950 r_616 C . PASS END=179731977;SVTYPE=DUP;SVLEN=163027 TR:VR 57:7 27:0 chr6 141917633 i_698 A . PASS END=141917634;SVTYPE=INS;SVINSLEN=130;SVINSSEQ=CTCCTCTGAGACAAAACTTCCAGAGGAACGATCAGACAGCAGCATTCGGGGTTCATGAAAATCCGCTGTTATGCAGCCACCGCTGCTGGTACCCAGGCAAACAGGGTCTGGAGTGGACCTCTAGCAAACT TR:VR 61:8 15:0 chr6 71728251 r_639_0 G [chr6:130214544[A . PASS SVTYPE=BND;MATEID=r_639_1 TR:VR 55:8 35:0 chr6 130214544 r_639_1 A [chr6:71728251[A . PASS SVTYPE=BND;MATEID=r_639_0 TR:VR 55:8 35:0 chr1 125096552 d_13 C . PASS END=125099863;SVTYPE=DEL;SVLEN=-3311 TR:VR 32:9 16:0 chr10 46280290 r_32_0 A A]chr12:77864462] . PASS SVTYPE=BND;MATEID=r_32_1 TR:VR 38:17 26:0 chr12 77864462 r_32_1 G G]chr10:46280290] . PASS SVTYPE=BND;MATEID=r_32_0 TR:VR 38:17 26:0 chr11 69470241 r_102 C . PASS END=126621258;SVTYPE=DUP;SVLEN=57151017 TR:VR 186:17 26:0 chr11 78257180 r_167 A . PASS END=78258823;SVTYPE=DEL;SVLEN=-1643 TR:VR 100:7 25:0 chr12 40630902 r_227_0 G G[chr14:48701927[ . PASS SVTYPE=BND;MATEID=r_227_1 TR:VR 136:10 29:0 chr14 48701927 r_227_1 A ]chr12:40630902]A . PASS SVTYPE=BND;MATEID=r_227_0 TR:VR 136:10 29:0 chr14 26417545 d_302 G . PASS END=26417595;SVTYPE=DEL;SVLEN=-50 TR:VR 48:13 12:0 chr14 52184836 r_367_0 T TG]chr17:60537023] . PASS SVTYPE=BND;MATEID=r_367_1;SVINSLEN=1;SVINSSEQ=G TR:VR 345:29 29:0 chr17 60537023 r_367_1 A AC]chr14:52184836] . PASS SVTYPE=BND;MATEID=r_367_0;SVINSLEN=1;SVINSSEQ=C TR:VR 345:29 29:0 chr17 54552219 r_444 A . Too_low_VAF END=61876244;SVTYPE=DEL;SVLEN=-7324025 TR:VR 560:6 39:0 chr2 22182581 r_524 A . PASS END=22353440;SVTYPE=DUP;SVLEN=170859 TR:VR 43:6 35:0 chr2 91510436 d_581 C . PASS END=91510941;SVTYPE=DEL;SVLEN=-505;SVINSLEN=200;SVINSSEQ=TTGGCTGGCATGGGTGGCTTGTCTGGTTTGGCTGGCCAGCTGGCTTAGCCGGCTGGATGGCTTGGCTGGCATGCCTGGCTTGGCTTGGCTGGCTGGTTTTGCTGGCTTGGCTGCCTGGCTGGCTTGGCTGGCCTGCCTGGCTTTGCTGGTGCTGGCCTGGCTTGGCTGGCTTGGCTGCCTGGCTGGCTTGGCTGGCATGC TR:VR 160:12 78:1 chr3 11943648 i_550 C . Too_small_size END=11943648;SVTYPE=INS;SVINSLEN=22;SVINSSEQ=GGTATATATATTTGGAATTTTG TR:VR 36:4 11:0 chr4 32062430 r_580_0 G G]chr4:49000043] . PASS SVTYPE=BND;MATEID=r_580_1 TR:VR 46:8 32:0 chr4 49000043 r_580_1 T T]chr4:32062430] . PASS SVTYPE=BND;MATEID=r_580_0 TR:VR 46:8 32:0 chr6 142366022 r_693 T . PASS END=150642644;SVTYPE=DUP;SVLEN=8276622 TR:VR 101:19 29:0 chr10 46596337 i_58 T . PASS END=46596337;SVTYPE=INS;SVINSLEN=52;SVINSSEQ=AAGTGCAGAGTCAAAGGAAGAAAACGATGATTTTTGATGCTCTCGAGACTCA TR:VR 18:5 17:0 chr11 118029152 r_184 T . PASS END=118225680;SVTYPE=DUP;SVLEN=196528 TR:VR 40:5 43:0 chr11 78262717 r_168 G . PASS END=130328187;SVTYPE=DUP;SVLEN=52065470 TR:VR 131:10 27:0 chr12 40651880 r_228_0 G ]chr6:93012087]T . PASS SVTYPE=BND;MATEID=r_228_1 TR:VR 97:43 25:0 chr6 93012087 r_228_1 T T[chr12:40651880[ . PASS SVTYPE=BND;MATEID=r_228_0 TR:VR 97:43 25:0 chr14 26495594 r_306_0 C ]chr17:64142891]G . PASS SVTYPE=BND;MATEID=r_306_1 TR:VR 213:61 29:0 chr17 64142891 r_306_1 G G[chr14:26495594[ . PASS SVTYPE=BND;MATEID=r_306_0 TR:VR 213:61 29:0 chr14 52206569 r_368_0 T [chr14:58635307[T . PASS SVTYPE=BND;MATEID=r_368_1 TR:VR 132:24 28:0 chr14 58635307 r_368_1 T [chr14:52206569[T . PASS SVTYPE=BND;MATEID=r_368_0 TR:VR 132:24 28:0 chr14_GL000225v1_random 95942 d_360 G . Too_low_VAF END=95980;SVTYPE=INS;SVINSLEN=39;SVINSSEQ=GCCTTGTGACACATCTCTGCACTGATCACACAGGTGATG TR:VR 603:8 538:1 chr16 89009152 i_285 C . PASS END=89009152;SVTYPE=INS;SVINSLEN=1022;SVINSSEQ=ACCTCATCTTTGCCAGGAGGACCCTGACACACCCACCTCATCTTTGCCAGGAGGACCCCTGACACACCCACCTCATCTTTGTCAGGAGCACCCGTGACACACCCACCTCATCTTTGCAGGAGAACCCTGACACACCCACCTCATCTTTGCAGGAGAACCCTGACACACCCACCTCATCTTTGCCAGGAGGACCCTGACACACCCACCTCATCTTTGCAGGAGAACCCTGACACACCCACCTCATCTTTGCCAGGAGGACCCTGACACACCCACCTCATCTTTGTCAGGAGCACCCTGTGACACACCCACCCATGTTTGCCAGGAGGACCCCTGACACACCCACCTCATCTTTGCAGGAGGACCCTGACACACCCACCTCATCTTTGCCAGAGGACGCTGACACACCCACCTCATCTTTGCCAGGAGGACCCTGACACACCCATTCCTCATCTGTGCCAGGAGGAACCCCGACACACCCACCTCATCTTTGCCAGGAGTGACCCGTGACACACCCACTCTCATCTGTGCCAGGAGGACCCTGACACACCCACCTCATCTTTGCAGGAGAACCCTGACACACCCCTCCCATCCTTGCCAGAGGACCCTGACACACCCACCTCATCTTTGCAGGAGAACCCTGACACACCCACCTCATCTTTGCCAGGAGGACCCTGACACACCCACCTCATCTTTGCCAGGAGGACCCCTGACACACCCACCTCATCTTTGTCAGGAGGCACCCGTGACACACCCACTTCATCTTTGCAGGAGAACCCTGACACACCCACCTCATCTTTGCAGGAGAACCCTGACACACCCACCTCATCTTTGCCAGGAGGACCCTGACACACCCACCTCATCTTTGCAGGAGAACCCTGACACACCCACCTCATCTTTGCCAGGAGGACCCTGACACACCCACCTCATCTTTGTCAGGAGCACCCGTGACACACCCACCTCATGTTTGCCAGGAGGACCCTGACACACCCACCTCATCTTGCAGAGGACCCTGACACAATCTA TR:VR 26:5 16:0 chr17 54659002 r_445_0 T T]chr17:57688240] . Too_low_VAF SVTYPE=BND;MATEID=r_445_1 TR:VR 498:15 24:0 chr17 57688240 r_445_1 T T]chr17:54659002] . Too_low_VAF SVTYPE=BND;MATEID=r_445_0 TR:VR 498:15 24:0 chr5 180404912 i_672 G . PASS END=180404912;SVTYPE=INS;SVINSLEN=54;SVINSSEQ=AAAAGCTTGGAGAAAAAAGACCAGAGGGTGTGGCGTGGGGGGAAGAGAAGGCAG TR:VR 33:4 17:0 chr5 69476730 d_812 T . PASS END=69476828;SVTYPE=INS;SVINSLEN=198;SVINSSEQ=CGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCAGAAATTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGTGACAGAGCAAGACTCCGTCTGAAAACAAACAAACAAAAAAAACAAATCTCAAACATGGAATTATTTTTTCACTTCTCTCTTTTGTTTTGTTTTTTTTTTTTTGAGACAGAG TR:VR 39:5 21:0 chr6 72398650 r_640_0 A A]chr6:72399158] . PASS SVTYPE=BND;MATEID=r_640_1 TR:VR 36:3 20:0 chr6 72399158 r_640_1 T T]chr6:72398650] . PASS SVTYPE=BND;MATEID=r_640_0 TR:VR 36:3 20:0 chr10 47120301 r_33 T . PASS END=51857802;SVTYPE=DUP;SVLEN=4737501 TR:VR 34:5 21:0 chr11 69757272 r_103_0 A A]chr11:126618284] . PASS SVTYPE=BND;MATEID=r_103_1 TR:VR 193:16 24:0 chr11 126618284 r_103_1 G G]chr11:69757272] . PASS SVTYPE=BND;MATEID=r_103_0 TR:VR 193:16 24:0 chr12 40652879 r_229_0 A A[chr6:99297726[ . PASS SVTYPE=BND;MATEID=r_229_1 TR:VR 106:40 21:0 chr6 99297726 r_229_1 A ]chr12:40652879]A . PASS SVTYPE=BND;MATEID=r_229_0 TR:VR 106:40 21:0 chr14 26738863 r_307_0 G ]chr17:55438114]A . Too_low_VAF SVTYPE=BND;MATEID=r_307_1 TR:VR 282:6 35:0 chr17 55438114 r_307_1 A A[chr14:26738863[ . Too_low_VAF SVTYPE=BND;MATEID=r_307_0 TR:VR 282:6 35:0 chr14 52213584 i_188 C . PASS END=52213584;SVTYPE=INS;SVINSLEN=2169;SVINSSEQ=ACCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACCTAGGGCAATGCCAGGCAAGGGTTAAGTCACTCACTCCTACACTTAAAGAGTAAACTATGTCTCAAATGCCTCAAGATTTTTGTTTTTCTCTAGCAGCCAAACAATACCTGGCTTCAAGATAAGCCAACTGACTGACTCCTGGCCTCTATGCCACCAGCCATAACTACAGCTTTAATTAGACAAGAGACTAATCTCAGTAACTTTCCCCTAATGAAAGACTACCAACCATGGGCTAGTTTACAGAAAGTGCACACTTACATGGCTTTATGTCCTATAAAGACCTTTTGATACATAAGGCCTAAAAGTAATATATTTAAATGTAAATTCTCCACCTCAAAATAAACATGGGTCATACATGTATATTTGTTCAATACACATATGTCAGGACCATCTTTGTAAATATTCATAGTTCCTCCTGTTAAGTGTGTATATTTAGCCAACCTGTTGTCATATGCACACAAGAAATCTGGGTTCAATTGATAGTGGGAACCATGAACTATAACTAAGACTAAATGCTGTACATATTTCCTGGATAACTCCAAAAGCATATCCTCAGCCCCTACAAGACATACAGGCAAACTAGTGCTATGTCTAATCCCACAATGTCTTTAAATCATATGGCTTTAGATATCCTAACTATGGCCCAGGGCAACACTTGTGCGGTAATTAAGGCTGTGTAATATAGATAGATATAGATATAGACATAGATATAGATATAGATATAGAAAGATACCAGATTCTTCTCACAATATAACTCAAGCTATTCAGGCCTTAAATACCCATATTTCTATTGGATATTATATATGCTATAGATGCTCTCTCTCAAGAGCCTGTGACAGCATGGTTTAGTCAACTTCCTAAGACATTGAAGACTCTCCTACACAGTATAATTGGCCTTCTGCTCATTGCTCTCTTTTGGTTGCTATGGATTTTATTGCTGCCGAGTACACTTTATATGGGAATGCAGGACACGCTTTCCCAAAAATCCTAGGTCCTCACACCATAATGCTCCAACAAATCCCTACTATGAATCCAGGGACTCAAGAATATTTCCAGCTCCTGATCAACAGATTCCATTCCAATACTCCCTAACTACACCCTTCTCAGCAGGAAGTAGCTGCTTTTCATAGAAATGGAATGGAATTTGAGAGCAGAGAATTGAAACTCAAGAGCTTAGCTTCAAACCTTTTTTAAAAATCTCTTTTTGCCTCTCTCTTGGGTTTCAAGATAGAACCTTGAAGCAAACTGCAGAAGCCTTTTACCCTAGCCTAAAAATAGACCAGTGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATCGCCAAGTCAATCCTAAGCCAAAAGAACAAGGCTGGAGGCATCACGCTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAGTAATGCTGCATATCTATAACTATCTGATCTTTGACAAACCTGAGAAAAATAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGATGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATTAATTCAAGATGGATTAAAGACTTAAACGTTAGACCTAAAACCATAAAAACTCTAGAAGAAAACCTAGGCAATACCATTCAGGACATAGGCATGGGCAAGGACTTCATGTCTAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAAAATGGGAGAAAATTTTCTCAACCTGCTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAACAAAAAAACAAACAACCCCATCAAAAAGTGGGCAAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAAAAATGCTCACCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACAATAAGATA TR:VR 68:32 19:0 chr17 54817108 r_446_0 T T]chr17:61847231] . Too_low_VAF SVTYPE=BND;MATEID=r_446_1 TR:VR 467:21 36:0 chr17 61847231 r_446_1 A A]chr17:54817108] . Too_low_VAF SVTYPE=BND;MATEID=r_446_0 TR:VR 467:21 36:0 chr19 54874456 r_517 C . PASS END=55044703;SVTYPE=DUP;SVLEN=170247;SVINSLEN=39;SVINSSEQ=TCCACCAAGTGTCAGACAATCCACCAAGTGTCAGACATT TR:VR 73:9 33:0 chr4 443324 d_738 T . PASS END=443352;SVTYPE=INS;SVINSLEN=28;SVINSSEQ=CTCCTATGTACGTAAAGGTTTGCGGACT TR:VR 18:7 14:0 chr5 71501570 r_607_0 G [chr5:83298120[A . PASS SVTYPE=BND;MATEID=r_607_1 TR:VR 43:6 37:0 chr5 83298120 r_607_1 A [chr5:71501570[A . PASS SVTYPE=BND;MATEID=r_607_0 TR:VR 43:6 37:0 chr6 143841665 r_694 T . PASS END=155663105;SVTYPE=DEL;SVLEN=-11821440 TR:VR 53:20 36:0 chr6 83679822 r_641 T . PASS END=83910601;SVTYPE=DUP;SVLEN=230779 TR:VR 24:4 42:0 chr7 26637766 r_707 A . PASS END=26737394;SVTYPE=DUP;SVLEN=99628 TR:VR 51:8 33:0 chr1 12856518 i_8 T . PASS END=12856518;SVTYPE=INS;SVINSLEN=296;SVINSSEQ=GTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTAGGAGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAGAAAGAAAAAG TR:VR 14:4 18:0 chr10 49499746 r_34 T . PASS END=76342328;SVTYPE=DUP;SVLEN=26842582 TR:VR 67:12 23:0 chr11 121212243 r_185 C . PASS END=124538236;SVTYPE=DUP;SVLEN=3325993 TR:VR 49:11 28:0 chr11 69766409 d_223 A . PASS END=69766461;SVTYPE=DEL;SVLEN=-52;SVINSLEN=26;SVINSSEQ=AGAACAAAAACCTAGTTTATTACTGC TR:VR 68:5 8:0 chr11 78300261 r_170_0 T [chr17:57688087[A . Too_low_VAF SVTYPE=BND;MATEID=r_170_1 TR:VR 344:15 26:0 chr17 57688087 r_170_1 A [chr11:78300261[A . Too_low_VAF SVTYPE=BND;MATEID=r_170_0 TR:VR 344:15 26:0 chr12 4078158 r_198 A . PASS END=4115265;SVTYPE=DUP;SVLEN=37107 TR:VR 59:5 34:0 chr14 26776982 r_308_0 G G]chr14:55063686] . Too_low_VAF SVTYPE=BND;MATEID=r_308_1 TR:VR 160:6 24:0 chr14 55063686 r_308_1 G G]chr14:26776982] . Too_low_VAF SVTYPE=BND;MATEID=r_308_0 TR:VR 160:6 24:0 chr14 52213632 r_369 A . PASS END=52224699;SVTYPE=DEL;SVLEN=-11067 TR:VR 78:13 21:0 chr17 54866561 r_447_0 A [chr17:54909072[A . PASS SVTYPE=BND;MATEID=r_447_1 TR:VR 455:56 37:0 chr17 54909072 r_447_1 A [chr17:54866561[A . PASS SVTYPE=BND;MATEID=r_447_0 TR:VR 455:56 37:0 chr19 54992456 r_518 A . PASS END=55247341;SVTYPE=DUP;SVLEN=254885 TR:VR 91:5 30:0 chr3 128775764 r_572 A . PASS END=128830792;SVTYPE=DUP;SVLEN=55028 TR:VR 54:6 26:0 chr4 48254077 r_581_0 T [chr4:49739863[TTCATGATGA . PASS SVTYPE=BND;MATEID=r_581_1;SVINSLEN=9;SVINSSEQ=TTCATGATG TR:VR 61:5 24:0 chr4 49739863 r_581_1 A [chr4:48254077[CATCATGAAA . PASS SVTYPE=BND;MATEID=r_581_0;SVINSLEN=9;SVINSSEQ=CATCATGAA TR:VR 61:5 24:0 chr6 144020849 r_695_0 A [chr6:144407414[G . PASS SVTYPE=BND;MATEID=r_695_1 TR:VR 57:28 31:0 chr6 144407414 r_695_1 G [chr6:144020849[G . PASS SVTYPE=BND;MATEID=r_695_0 TR:VR 57:28 31:0 chrUn_KI270757v1 50890 d_925 T . Too_low_VAF END=50984;SVTYPE=INS;SVINSLEN=95;SVINSSEQ=CTTCATATAAAAACTAGAGAGAAGAATTCTGAGAAACCTCTTTGTGATGTGTGCATTTATCTCATGGAGTTGAATCTTTCTTTTGTTTGAGCAGA TR:VR 135:3 95:0 chr10 51857930 r_35_0 A [chr10:83989903[G . PASS SVTYPE=BND;MATEID=r_35_1 TR:VR 39:6 25:0 chr10 83989903 r_35_1 G [chr10:51857930[G . PASS SVTYPE=BND;MATEID=r_35_0 TR:VR 39:6 25:0 chr11 69803142 r_104_0 A [chr11:128786974[C . PASS SVTYPE=BND;MATEID=r_104_1 TR:VR 125:16 23:0 chr11 128786974 r_104_1 C [chr11:69803142[C . PASS SVTYPE=BND;MATEID=r_104_0 TR:VR 125:16 23:0 chr11 78332530 r_171 A . Too_low_VAF END=80442645;SVTYPE=DUP;SVLEN=2110115 TR:VR 184:5 30:0 chr12 41353256 r_230_0 A [chr14:54669899[T . PASS SVTYPE=BND;MATEID=r_230_1 TR:VR 79:9 42:0 chr14 54669899 r_230_1 T [chr12:41353256[T . PASS SVTYPE=BND;MATEID=r_230_0 TR:VR 79:9 42:0 chr14 26956338 r_309_0 A ]chr17:55957795]C . PASS SVTYPE=BND;MATEID=r_309_1 TR:VR 230:34 34:0 chr17 55957795 r_309_1 C C[chr14:26956338[ . PASS SVTYPE=BND;MATEID=r_309_0 TR:VR 230:34 34:0 chr17 54881481 r_448 G . PASS END=60623198;SVTYPE=DEL;SVLEN=-5741717 TR:VR 455:39 40:0 chr19 55613709 r_519 T . PASS END=55659867;SVTYPE=DUP;SVLEN=46158 TR:VR 73:5 23:0 chr3 129718416 r_573 C . Too_low_VAF END=130294305;SVTYPE=DUP;SVLEN=575889 TR:VR 64:3 26:0 chr4 48933087 r_582 T . PASS END=49034614;SVTYPE=DUP;SVLEN=101527 TR:VR 36:6 35:0 chr6 145197869 r_696 C . PASS END=145254198;SVTYPE=DEL;SVLEN=-56329 TR:VR 87:10 40:0 chr6 94587837 r_642_0 C [chr6:95096835[A . PASS SVTYPE=BND;MATEID=r_642_1 TR:VR 24:7 35:0 chr6 95096835 r_642_1 A [chr6:94587837[A . PASS SVTYPE=BND;MATEID=r_642_0 TR:VR 24:7 35:0 chr7 36318638 r_708 T . PASS END=36453124;SVTYPE=DUP;SVLEN=134486 TR:VR 57:13 31:0 chr1 143259878 d_150 T . Too_low_VAF END=143260084;SVTYPE=DEL;SVLEN=-206 TR:VR 167:3 106:1 chr10 51863994 r_36 T . PASS END=81581552;SVTYPE=DEL;SVLEN=-29717558;SVINSLEN=10;SVINSSEQ=AAACCCTGCA TR:VR 62:5 31:0 chr11 124537855 r_186_0 T [chr11:124538334[T . PASS SVTYPE=BND;MATEID=r_186_1 TR:VR 30:11 16:0 chr11 124538334 r_186_1 T [chr11:124537855[T . PASS SVTYPE=BND;MATEID=r_186_0 TR:VR 30:11 16:0 chr11 69809408 r_105_0 A A]chr11:71261838] . PASS SVTYPE=BND;MATEID=r_105_1 TR:VR 176:16 33:0 chr11 71261838 r_105_1 C C]chr11:69809408] . PASS SVTYPE=BND;MATEID=r_105_0 TR:VR 176:16 33:0 chr11 78332733 r_172_0 C C]chr11:78333436] . Too_low_VAF SVTYPE=BND;MATEID=r_172_1 TR:VR 114:3 14:0 chr11 78333436 r_172_1 A A]chr11:78332733] . Too_low_VAF SVTYPE=BND;MATEID=r_172_0 TR:VR 114:3 14:0 chr12 132241020 i_159 C . PASS END=132241020;SVTYPE=INS;SVINSLEN=220;SVINSSEQ=ACACACGCCACACCCCTCCGGGGCCCTCCCTATACCCATTACACACACGCCACACCCCCTTCCCGGGGCCTTCCTACACCCATTACACACACGCCACACCCCCTTCCCGGGCCCTCCCTATCCCCATTACACACACGCCACACTCCCCTTCCCGGGGCCCTCCCTATACCCATTACACACACGCCACCCCCTTCCTGGGGCCCTCCCCCTATACCCATTA TR:VR 32:4 14:0 chr12 44409854 r_231_0 A [chr14:56056315[T . PASS SVTYPE=BND;MATEID=r_231_1 TR:VR 82:7 39:0 chr14 56056315 r_231_1 T [chr12:44409854[T . PASS SVTYPE=BND;MATEID=r_231_0 TR:VR 82:7 39:0 chr12 94596224 r_273 T . PASS END=96892706;SVTYPE=DEL;SVLEN=-2296482;SVINSLEN=39;SVINSSEQ=TTGATAGAAGTCTAACTCCAAAATATATTTGGCATCTGA TR:VR 47:5 34:0 chr14 26996640 r_310_0 T ]chr17:55448765]G . Too_low_VAF SVTYPE=BND;MATEID=r_310_1 TR:VR 356:5 22:0 chr17 55448765 r_310_1 G G[chr14:26996640[ . Too_low_VAF SVTYPE=BND;MATEID=r_310_0 TR:VR 356:5 22:0 chr17 54941738 r_449 A . PASS END=56396271;SVTYPE=DEL;SVLEN=-1454533;SVINSLEN=1;SVINSSEQ=G TR:VR 316:42 20:0 chr6 148234734 i_700 G . Too_small_size END=148234734;SVTYPE=INS;SVINSLEN=37;SVINSSEQ=GAGAATTACTTGAAACCGGGAGGCAGAGGTTGCAGTG TR:VR 35:10 14:0 chr6 94591254 r_643_0 G [chr6:96466694[C . PASS SVTYPE=BND;MATEID=r_643_1 TR:VR 32:6 43:0 chr6 96466694 r_643_1 C [chr6:94591254[C . PASS SVTYPE=BND;MATEID=r_643_0 TR:VR 32:6 43:0 chr11 69809426 r_106_0 C [chr11:128364287[C . Too_low_VAF SVTYPE=BND;MATEID=r_106_1 TR:VR 143:5 22:0 chr11 128364287 r_106_1 C [chr11:69809426[C . Too_low_VAF SVTYPE=BND;MATEID=r_106_0 TR:VR 143:5 22:0 chr11 78536892 r_173 C . PASS END=80443765;SVTYPE=DEL;SVLEN=-1906873 TR:VR 163:19 45:0 chr12 44526187 r_232 C . PASS END=44564000;SVTYPE=DEL;SVLEN=-37813 TR:VR 77:42 35:0 chr12 97479914 r_274 T . PASS END=97563317;SVTYPE=DUP;SVLEN=83403 TR:VR 79:5 27:0 chr14 26996698 r_311 T . PASS END=50016813;SVTYPE=DUP;SVLEN=23020115 TR:VR 258:24 22:0 chr14 52214298 i_189 A . PASS END=52214298;SVTYPE=INS;SVINSLEN=1604;SVINSSEQ=AAGAAGCCCAAGACCAAAAAAAAAAAAAAAAAAAAAATAGACTCCACGTCCCTCCCTTTCCCACCCATGGCAACACTCCCTTCACATTTATTTAACTGTGTACTGGTATCTAATTATGTGCCTTCTTAGAAGTTCCAGAGGCTAATCTTCAGACACACAGCCTAAAGCCTGGAGACTCCAGTGACACAATTCCAGAGACTACTTCAAGCTGGCTAATCAATAACTCCTCGGCCGTTGCTGAGATGTCTCCAGATGTCTCCAGCCCACGATCCAGGTGGACTGGGACCCAAGATAACCACCTGAACCAGACACACATTGTACTCAGCCCAATTCTTGCATGCCTTCCTTTTCAAGCTTGTCTTTTTAAACCCCTGCCTCCCCCCAACCTAAAATCAAAGCTTTGAACATTGGAATCCGGTCACTTCCCCTTTCCTGGTTTCCACTAATAGTCACTTTCTTTCTACCAGAGCTCCCTCTTGTTAATTGCACTCTGTAAGTGGTGAGCAACTGCACCTGTGTTTGGTTACAAGGTGAAGCCGAAAACGTACAGTAAAAAACAGAGTAATTATATATTTAAGTTACAGTTTATGGCAAATCATATTGGAAGTATTTACTCACCATCTGCCTTATCTATCTAAATAAAGGCTAACTGTTAATCCAGCACTTTCAATGCTTTCGACTCTCAAAGACACTTGTATCAACAGCATTTCCTGGAGGAGGTTTCCTAGCAAGTTCCTGTTTAAAAACAATTTGCACTCTATGTTAAGTATAATTTTAATCGAGAGGCTGAATCAAAAGATATTGGGGCATACAATAATTTATTTCCATATATACAGTCTTAAAACAGTTTACCCATACAATATTAATTTCATTAATTGTATCTCTAAATCCAAAGAGTGGATTATTTTACACAAATTGTGTATCTGCTGTCCTTTTTATTACGCATATTTAATGTTATGGTTAAGAATACCTAAACACTGATATTGTAATTCTCTTTTTTCTCTTGGGAATCTGAAATTTGAATGTAAACCAAAGGAGATACAGTAGTACCAAAATGAGGAGAGTAAAAGCCCTAGAGTGCTGAATTTGAATCAAAGTATCCATATGAATCCAGGAGGTATTTTATCATCGCTTTATAAATATAGTTCCCCAAAAGTTTTAGGGCAATATTAAGTTCTAAAATTTCAGGAAAACAAATGTTAGGAATTTTATAAAACACATCCTTTAAAACAGCAGTCCCCAACTCAGATTTTGGTGTAACCAGTTTCATGGAAGACAATTTTTCCACGGAAGGGGAGCATAGAGGGATGGTTTCAGGATGAAACTGTTTCACCTCAGACTCAGATAATCAGGCATTAGATTCTCATGAGGAGCACCCAACCTGGATCCCTCACATGCACAGTTCACAATAAGGGGTCCCACTCCCATGAGATTCCAATGCTGCCACTGATCTGACAGGAGATGGGTCCACAGCCTGTGTGTGGGGACCTCTGCTTTAAAAGCTTAAGTATTTAAATTTGTTATACTTATTTAATTTTGTGAATTTTGAATAATAAATTTGCATTCTCAACTAGGATTACTGATGAGAAAACAAAGTACCACCT TR:VR 46:11 20:0 chr17 55442031 r_450 A . Too_low_VAF END=55448483;SVTYPE=DEL;SVLEN=-6452;SVINSLEN=1;SVINSSEQ=T TR:VR 261:5 19:0 chr19 56306506 d_545 T . PASS END=56306692;SVTYPE=DEL;SVLEN=-186;SVINSLEN=18;SVINSSEQ=TCCCTTGATAGCTACAAA TR:VR 41:3 11:0 chr3 90571948 d_713 T . PASS END=90572063;SVTYPE=INS;SVINSLEN=115;SVINSSEQ=CCTTTTCTACCATAGGACTCAAAGTGCTCTAAATATATACTTGCAAATTCTACAAAAAGAGTGTTTCAAAACTGCTCTATCAAAAGAAAGGTTAAACTCTGTGAGTTGAACACAC TR:VR 39:4 8:0 chr5 72682836 r_608_0 C C]chr5:83297966] . PASS SVTYPE=BND;MATEID=r_608_1 TR:VR 46:4 33:0 chr5 83297966 r_608_1 T T]chr5:72682836] . PASS SVTYPE=BND;MATEID=r_608_0 TR:VR 46:4 33:0 chr6 148234734 i_701 G . Too_small_size END=148234734;SVTYPE=INS;SVINSLEN=37;SVINSSEQ=GAGAATTACTTGAAACCGGGAGGCAGAGGTTGCAGTG TR:VR 35:10 14:0 chr6 94595631 r_644 C . PASS END=96426153;SVTYPE=DEL;SVLEN=-1830522 TR:VR 24:9 42:0 chr7 41693938 r_709 T . PASS END=41823229;SVTYPE=DUP;SVLEN=129291 TR:VR 48:8 28:0 chr10 5338446 r_19 G . PASS END=5405878;SVTYPE=DUP;SVLEN=67432 TR:VR 63:11 24:0 chr11 69853687 r_107_0 T ]chr13:30701830]T . PASS SVTYPE=BND;MATEID=r_107_1 TR:VR 122:10 32:0 chr13 30701830 r_107_1 T T[chr11:69853687[ . PASS SVTYPE=BND;MATEID=r_107_0 TR:VR 122:10 32:0 chr11 80276060 r_174_0 A A]chr11:80279409] . PASS SVTYPE=BND;MATEID=r_174_1 TR:VR 117:83 17:0 chr11 80279409 r_174_1 G G]chr11:80276060] . PASS SVTYPE=BND;MATEID=r_174_0 TR:VR 117:83 17:0 chr12 44564520 r_233_0 T T]chr14:38023807] . PASS SVTYPE=BND;MATEID=r_233_1 TR:VR 69:41 41:0 chr14 38023807 r_233_1 T T]chr12:44564520] . PASS SVTYPE=BND;MATEID=r_233_0 TR:VR 69:41 41:0 chr13 104098608 r_293_0 T T]chr13:107440608] . PASS SVTYPE=BND;MATEID=r_293_1 TR:VR 37:6 29:0 chr13 107440608 r_293_1 G G]chr13:104098608] . PASS SVTYPE=BND;MATEID=r_293_0 TR:VR 37:6 29:0 chr14 27050833 r_312_0 C [chr14:55018535[C . Too_low_VAF SVTYPE=BND;MATEID=r_312_1 TR:VR 202:6 44:0 chr14 55018535 r_312_1 C [chr14:27050833[C . Too_low_VAF SVTYPE=BND;MATEID=r_312_0 TR:VR 202:6 44:0 chr2 23978686 r_525 G . PASS END=24186905;SVTYPE=DUP;SVLEN=208219;SVINSLEN=23;SVINSSEQ=AAGAAGAAGAATTGTCTTGGCCA TR:VR 50:8 23:0 chr5 72683101 r_609 G . PASS END=83428263;SVTYPE=DUP;SVLEN=10745162 TR:VR 52:5 32:0 chr6 148238603 r_697_0 G GCTCATCATCTGCAGATGTTGTTCAAAG]chr6:148243271] . PASS SVTYPE=BND;MATEID=r_697_1;SVINSLEN=27;SVINSSEQ=CTCATCATCTGCAGATGTTGTTCAAAG TR:VR 33:5 14:0 chr6 148243271 r_697_1 A ACTTTGAACAACATCTGCAGATGATGAG]chr6:148238603] . PASS SVTYPE=BND;MATEID=r_697_0;SVINSLEN=27;SVINSSEQ=CTTTGAACAACATCTGCAGATGATGAG TR:VR 33:5 14:0 chr6 94595839 r_645 T . PASS END=97162393;SVTYPE=DUP;SVLEN=2566554 TR:VR 44:6 36:0 chr10 59116133 r_37_0 T [chr6:151424293[T . PASS SVTYPE=BND;MATEID=r_37_1 TR:VR 61:9 19:0 chr6 151424293 r_37_1 T [chr10:59116133[T . PASS SVTYPE=BND;MATEID=r_37_0 TR:VR 61:9 19:0 chr11 126304858 r_187_0 C C[chr15:90269913[ . PASS SVTYPE=BND;MATEID=r_187_1 TR:VR 65:5 26:0 chr15 90269913 r_187_1 T ]chr11:126304858]T . PASS SVTYPE=BND;MATEID=r_187_0 TR:VR 65:5 26:0 chr11 69958473 r_108_0 G G[chr13:27190405[ . PASS SVTYPE=BND;MATEID=r_108_1 TR:VR 118:10 37:0 chr13 27190405 r_108_1 A ]chr11:69958473]A . PASS SVTYPE=BND;MATEID=r_108_0 TR:VR 118:10 37:0 chr11 80276238 r_175_0 T [chr11:80279446[C . PASS SVTYPE=BND;MATEID=r_175_1 TR:VR 117:53 17:0 chr11 80279446 r_175_1 C [chr11:80276238[C . PASS SVTYPE=BND;MATEID=r_175_0 TR:VR 117:53 17:0 chr12 51308554 r_234_0 C [chr12:74638780[G . PASS SVTYPE=BND;MATEID=r_234_1 TR:VR 120:57 29:0 chr12 74638780 r_234_1 G [chr12:51308554[G . PASS SVTYPE=BND;MATEID=r_234_0 TR:VR 120:57 29:0 chr14 27083008 r_313_0 T [chr14:37382413[T . Too_low_VAF SVTYPE=BND;MATEID=r_313_1 TR:VR 216:3 37:0 chr14 37382413 r_313_1 T [chr14:27083008[T . Too_low_VAF SVTYPE=BND;MATEID=r_313_0 TR:VR 216:3 37:0 chr17 79613991 i_324 C . PASS END=79613996;SVTYPE=INS;SVINSLEN=253;SVINSSEQ=AAAACAAAAGACTAGGAGGACAATCACACCCTCAATAAAACCTGTGTAGATTAAGGACGCCACAAACCAGATGAAGGCGGGGAGACAGGCAGGAGAAGACAACTCGCAGCCATTAGTAAATCCGGGGTTGTGAAGAGAGGCTGAAAGCCAAGGAGACTCGCCCTGTGTGCTTCCACACCCTGGAGGCAGGTGGGCTACTTGGTAGATGCTTCCTTTGCACCTCCCGCCCTCCCCTCGATGCAACTTCCCCTTA TR:VR 37:4 12:0 chr19 57873056 r_521 T . PASS END=57906855;SVTYPE=DUP;SVLEN=33799 TR:VR 48:3 24:0 chr21 8470658 r_545_0 A AAGCCTCCGGGGTCGACCGCCTGCCGCCCGCGGGCG[chr22_KI270733v1_random:136584[ . Too_low_VAF SVTYPE=BND;MATEID=r_545_1;SVINSLEN=35;SVINSSEQ=AGCCTCCGGGGTCGACCGCCTGCCGCCCGCGGGCG TR:VR 722:4 571:0 chr22_KI270733v1_random 136584 r_545_1 T ]chr21:8470658]CGCCCGCGGGCGGCAGGCGGTCGACCCCGGAGGCTT . Too_low_VAF SVTYPE=BND;MATEID=r_545_0;SVINSLEN=35;SVINSSEQ=CGCCCGCGGGCGGCAGGCGGTCGACCCCGGAGGCT TR:VR 722:4 571:0 chr3 90572906 d_715 G . PASS END=90573047;SVTYPE=DEL;SVLEN=-141;SVINSLEN=122;SVINSSEQ=TTGAATGCAAATATCACAAAGTAGTTTCTGACTATGCTTCCGTTTTGATTTCATGTGAAGATATTGCTTTTTCTGCCGTATGCCTCAAAGAGATCTTAATATACTCTTGCAAATTCCACAAA TR:VR 41:6 8:0 chr6 150418867 r_698_0 T [chr6:154921859[G . PASS SVTYPE=BND;MATEID=r_698_1 TR:VR 82:12 47:0 chr6 154921859 r_698_1 G [chr6:150418867[G . PASS SVTYPE=BND;MATEID=r_698_0 TR:VR 82:12 47:0 chr6 94600414 r_646 C . PASS END=98111599;SVTYPE=DEL;SVLEN=-3511185 TR:VR 22:5 29:0 chr10 59325611 r_38_0 G G]chr6:151978423] . PASS SVTYPE=BND;MATEID=r_38_1 TR:VR 58:9 35:0 chr6 151978423 r_38_1 G G]chr10:59325611] . PASS SVTYPE=BND;MATEID=r_38_0 TR:VR 58:9 35:0 chr11 126306812 r_188_0 G G]chr15:90270148] . PASS SVTYPE=BND;MATEID=r_188_1 TR:VR 69:8 26:0 chr15 90270148 r_188_1 A A]chr11:126306812] . PASS SVTYPE=BND;MATEID=r_188_0 TR:VR 69:8 26:0 chr11 69984415 r_109_0 A [chr11:80381540[C . Too_low_VAF SVTYPE=BND;MATEID=r_109_1 TR:VR 174:8 30:0 chr11 80381540 r_109_1 C [chr11:69984415[C . Too_low_VAF SVTYPE=BND;MATEID=r_109_0 TR:VR 174:8 30:0 chr11 80283897 r_176 A . PASS END=126031089;SVTYPE=DEL;SVLEN=-45747192 TR:VR 142:34 34:0 chr14 27131700 r_314_0 C [chr14:27157423[C . Too_low_VAF SVTYPE=BND;MATEID=r_314_1 TR:VR 340:10 28:0 chr14 27157423 r_314_1 C [chr14:27131700[C . Too_low_VAF SVTYPE=BND;MATEID=r_314_0 TR:VR 340:10 28:0 chr14 52214922 r_370_0 C ]chr17:64009810]T . PASS SVTYPE=BND;MATEID=r_370_1 TR:VR 229:23 34:0 chr17 64009810 r_370_1 T T[chr14:52214922[ . PASS SVTYPE=BND;MATEID=r_370_0 TR:VR 229:23 34:0 chr17 55564739 r_451_0 G [chr17:61677399[G . PASS SVTYPE=BND;MATEID=r_451_1 TR:VR 325:21 40:0 chr17 61677399 r_451_1 G [chr17:55564739[G . PASS SVTYPE=BND;MATEID=r_451_0 TR:VR 325:21 40:0 chr5 83287480 r_610_0 T [chr5:83287669[G . PASS SVTYPE=BND;MATEID=r_610_1 TR:VR 24:6 17:0 chr5 83287669 r_610_1 G [chr5:83287480[G . PASS SVTYPE=BND;MATEID=r_610_0 TR:VR 24:6 17:0 chr6 150482459 r_699_0 A ATGTGACTTCATAGAACATAAGATTCTCCAAAGAATCTTATGTTCTATGA]chr6:150490359] . PASS SVTYPE=BND;MATEID=r_699_1;SVINSLEN=49;SVINSSEQ=TGTGACTTCATAGAACATAAGATTCTCCAAAGAATCTTATGTTCTATGA TR:VR 62:9 14:0 chr6 150490359 r_699_1 A ATCATAGAACATAAGATTCTTTGGAGAATCTTATGTTCTATGAAGTCACA]chr6:150482459] . PASS SVTYPE=BND;MATEID=r_699_0;SVINSLEN=49;SVINSSEQ=TCATAGAACATAAGATTCTTTGGAGAATCTTATGTTCTATGAAGTCACA TR:VR 62:9 14:0 chr6 94604202 r_647 G . PASS END=144185043;SVTYPE=DEL;SVLEN=-49580841 TR:VR 52:18 21:0 chr1 84545780 r_6_0 T T]chr1:89757313] . PASS SVTYPE=BND;MATEID=r_6_1 TR:VR 34:5 37:0 chr1 89757313 r_6_1 A A]chr1:84545780] . PASS SVTYPE=BND;MATEID=r_6_0 TR:VR 34:5 37:0 chr10 59610754 r_39 T . PASS END=60337681;SVTYPE=DUP;SVLEN=726927 TR:VR 32:6 27:0 chr11 80413828 r_177_0 T T]chr11:126730012] . PASS SVTYPE=BND;MATEID=r_177_1 TR:VR 126:73 46:0 chr11 126730012 r_177_1 C C]chr11:80413828] . PASS SVTYPE=BND;MATEID=r_177_0 TR:VR 126:73 46:0 chr14 27155170 r_315_0 T T[chr17:54854241[ . Too_low_VAF SVTYPE=BND;MATEID=r_315_1 TR:VR 403:12 34:0 chr17 54854241 r_315_1 C ]chr14:27155170]C . Too_low_VAF SVTYPE=BND;MATEID=r_315_0 TR:VR 403:12 34:0 chr17 55737172 r_452_0 A [chr17:55850207[T . Too_low_VAF SVTYPE=BND;MATEID=r_452_1 TR:VR 339:5 29:0 chr17 55850207 r_452_1 T [chr17:55737172[T . Too_low_VAF SVTYPE=BND;MATEID=r_452_0 TR:VR 339:5 29:0 chr19 58607110 r_522_0 G G]chr9:132232275] . PASS SVTYPE=BND;MATEID=r_522_1 TR:VR 46:6 31:0 chr9 132232275 r_522_1 G G]chr19:58607110] . PASS SVTYPE=BND;MATEID=r_522_0 TR:VR 46:6 31:0 chr5 83287637 r_611 T . PASS END=83407121;SVTYPE=DEL;SVLEN=-119484 TR:VR 41:5 31:0 chr6 150490261 r_700_0 A A]chr6:152276741] . PASS SVTYPE=BND;MATEID=r_700_1 TR:VR 87:14 26:0 chr6 152276741 r_700_1 A A]chr6:150490261] . PASS SVTYPE=BND;MATEID=r_700_0 TR:VR 87:14 26:0 chr6 94605004 r_648 T . PASS END=95121630;SVTYPE=DEL;SVLEN=-516626 TR:VR 27:9 19:0 chr1 94307842 d_11 G . Too_small_size END=94307881;SVTYPE=DEL;SVLEN=-39 TR:VR 18:6 19:0 chr11 126492070 r_189_0 A A]chr11:126495335] . PASS SVTYPE=BND;MATEID=r_189_1 TR:VR 74:7 13:0 chr11 126495335 r_189_1 G G]chr11:126492070] . PASS SVTYPE=BND;MATEID=r_189_0 TR:VR 74:7 13:0 chr11 80413832 r_178 G . PASS END=121522476;SVTYPE=DUP;SVLEN=41108644 TR:VR 118:21 42:0 chr14 27173140 r_316_0 G ]chr17:54934114]T . Too_low_VAF SVTYPE=BND;MATEID=r_316_1 TR:VR 467:6 27:0 chr17 54934114 r_316_1 T T[chr14:27173140[ . Too_low_VAF SVTYPE=BND;MATEID=r_316_0 TR:VR 467:6 27:0 chr17 55841145 r_453 A . Too_low_VAF END=57594282;SVTYPE=DEL;SVLEN=-1753137 TR:VR 308:4 30:0 chr19 598972 r_507 T . PASS END=699362;SVTYPE=DUP;SVLEN=100390 TR:VR 51:8 29:0 chr20 6022066 r_538 T . PASS END=6306894;SVTYPE=DUP;SVLEN=284828 TR:VR 66:6 39:0 chr5 19473755 r_594 C . PASS END=19524870;SVTYPE=DUP;SVLEN=51115 TR:VR 47:6 32:0 chr6 150541247 r_701 T . PASS END=150794641;SVTYPE=DUP;SVLEN=253394;SVINSLEN=2;SVINSSEQ=TC TR:VR 65:12 21:0 chr6 94957359 r_649_0 A [chr6:97172135[TATATAAAATATATATAAAATATATTATATATT . PASS SVTYPE=BND;MATEID=r_649_1;SVINSLEN=32;SVINSSEQ=TATATAAAATATATATAAAATATATTATATAT TR:VR 67:29 36:0 chr6 97172135 r_649_1 T [chr6:94957359[ATATATAATATATTTTATATATATTTTATATAT . PASS SVTYPE=BND;MATEID=r_649_0;SVINSLEN=32;SVINSSEQ=ATATATAATATATTTTATATATATTTTATATA TR:VR 67:29 36:0 chr7 64028595 r_710 A . PASS END=64500417;SVTYPE=DUP;SVLEN=471822 TR:VR 54:9 38:0 chr1 149741351 r_13 G . PASS END=149846142;SVTYPE=DUP;SVLEN=104791 TR:VR 40:4 30:0 chr10 6258012 r_20 C . PASS END=6541367;SVTYPE=DUP;SVLEN=283355 TR:VR 59:3 32:0 chr11 126496331 r_190 A . PASS END=126503230;SVTYPE=DEL;SVLEN=-6899 TR:VR 93:15 16:0 chr11 80441798 r_179 A . PASS END=127415663;SVTYPE=DEL;SVLEN=-46973865 TR:VR 127:20 37:0 chr12 51722152 r_235 C . PASS END=57593456;SVTYPE=DEL;SVLEN=-5871304 TR:VR 94:59 31:0 chr14 27173190 r_317_0 T TG]chr14:36115116] . Too_low_VAF SVTYPE=BND;MATEID=r_317_1;SVINSLEN=1;SVINSSEQ=G TR:VR 264:7 33:0 chr14 36115116 r_317_1 C CC]chr14:27173190] . Too_low_VAF SVTYPE=BND;MATEID=r_317_0;SVINSLEN=1;SVINSSEQ=C TR:VR 264:7 33:0 chr14 52215103 r_371_0 T T]chr17:60536309] . PASS SVTYPE=BND;MATEID=r_371_1 TR:VR 366:22 34:0 chr17 60536309 r_371_1 T T]chr14:52215103] . PASS SVTYPE=BND;MATEID=r_371_0 TR:VR 366:22 34:0 chr17 56013413 r_454_0 T T]chr17:56463982] . PASS SVTYPE=BND;MATEID=r_454_1 TR:VR 248:65 33:0 chr17 56463982 r_454_1 G G]chr17:56013413] . PASS SVTYPE=BND;MATEID=r_454_0 TR:VR 248:65 33:0 chr18 79623499 i_360 T . PASS END=79623499;SVTYPE=INS;SVINSLEN=191;SVINSSEQ=AGGCTCCTGCAGACACGGGGCTGAGGTATATACAGTAGGTAATAGAGGGGCTCCTGCAGACACGGGGCTGAGGTGTATACAGTAGGTAATAGAGGCTCCTGCAGACACACGGGACTGAGGTGTATACAATGGAGGTAATAGAGGGGCTCCAGCAGACACGGGGCTGAGGTGTATACAGTAGGTAATAGAGA TR:VR 31:6 8:0 chr3 90578366 d_717 A . PASS END=90578496;SVTYPE=INS;SVINSLEN=131;SVINSSEQ=TTTGAAAGCACAGATCACAAAGTAGTTTCTGAGAATTCTTCTGTCTAGTTTTATATGAAGAAATCACATTTTAAATGAAGGCCACAAAGAGGTCCATATATCCACTTGCAGATTCTACAAAAAGAGTGTTT TR:VR 42:4 11:0 chr6 150545650 r_702_0 A [chr6:150813328[ACTACAAAA . PASS SVTYPE=BND;MATEID=r_702_1;SVINSLEN=8;SVINSSEQ=ACTACAAA TR:VR 60:10 27:0 chr6 150813328 r_702_1 A [chr6:150545650[TTTGTAGTA . PASS SVTYPE=BND;MATEID=r_702_0;SVINSLEN=8;SVINSSEQ=TTTGTAGT TR:VR 60:10 27:0 chr6 95095646 r_650_0 A ACCACTTGGAACTCTGAGTCC]chr6:143840246] . PASS SVTYPE=BND;MATEID=r_650_1;SVINSLEN=20;SVINSSEQ=CCACTTGGAACTCTGAGTCC TR:VR 78:15 35:0 chr6 143840246 r_650_1 T TGGACTCAGAGTTCCAAGTGG]chr6:95095646] . PASS SVTYPE=BND;MATEID=r_650_0;SVINSLEN=20;SVINSSEQ=GGACTCAGAGTTCCAAGTGG TR:VR 78:15 35:0 chr7 64541292 i_727 T . PASS END=64541292;SVTYPE=INS;SVINSLEN=306;SVINSSEQ=AAAACAGAAAACAGAGGTAAAGGCCGGGCACGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGTGGAGGTGGGTGAATCACCTGAGGTCAAGAGGTCAAACCCCATCTCTAAATACAAAAATTAGCTGGGCGTGGTTGCAGGCGCCTGTAATCCCAGCTATTTGGGAGGCCGAGGATGAGAATCCCTTGAACCTGGGAGGCAGCGGTTGCAGTGATCCGAGATGGCAACACTGCACTCCAGCCTGGGCGACAGAGTGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAAG TR:VR 14:3 16:0 chrX 112711008 i_881 G . Too_small_size END=112711008;SVTYPE=INS;SVINSLEN=41;SVINSSEQ=TATATATATATATATATATATATATATATATATATATATAT TR:VR 24:6 14:0 chrY 56838933 i_900 G . Too_low_VAF END=56838933;SVTYPE=INS;SVINSLEN=439;SVINSSEQ=AGTTTTCACCTATCTCTACACTGACCACCTAAGTGATGTAACCCTTGTCTAGTTGGAGCCTACTGGAGATTTCTGACATACCTATGCAAAGATCACCGAGGTGATGTAAATCATTTCCAGGCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCACTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTAGGCTCACTGCAAGCTCTGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCCATTTCCAGG TR:VR 178:3 184:0 chr10 107165857 r_83_0 T [chr8:54498401[C . PASS SVTYPE=BND;MATEID=r_83_1 TR:VR 42:6 23:0 chr8 54498401 r_83_1 C [chr10:107165857[C . PASS SVTYPE=BND;MATEID=r_83_0 TR:VR 42:6 23:0 chr11 126496559 r_191 G . PASS END=126529586;SVTYPE=DUP;SVLEN=33027 TR:VR 154:11 31:0 chr11 80441816 r_180 C . PASS END=80907779;SVTYPE=DUP;SVLEN=465963 TR:VR 127:69 33:0 chr14 27200202 r_318_0 G [chr17:61847377[T . PASS SVTYPE=BND;MATEID=r_318_1 TR:VR 457:35 37:0 chr17 61847377 r_318_1 T [chr14:27200202[T . PASS SVTYPE=BND;MATEID=r_318_0 TR:VR 457:35 37:0 chr14 52215160 r_372 T . PASS END=52237288;SVTYPE=DUP;SVLEN=22128 TR:VR 119:29 25:0 chr17 56462231 r_455 A . PASS END=62632641;SVTYPE=DUP;SVLEN=6170410 TR:VR 214:62 36:0 chr17 81275067 r_493_0 G ]chr5:128151225]T . PASS SVTYPE=BND;MATEID=r_493_1 TR:VR 54:12 23:0 chr5 128151225 r_493_1 T T[chr17:81275067[ . PASS SVTYPE=BND;MATEID=r_493_0 TR:VR 54:12 23:0 chr2 241490492 r_537 C . PASS END=241617675;SVTYPE=DUP;SVLEN=127183 TR:VR 49:7 31:0 chr2 94951532 r_529 T . PASS END=95387016;SVTYPE=DUP;SVLEN=435484 TR:VR 52:5 32:0 chr5 84441291 r_612_0 C C]chr5:87670214] . PASS SVTYPE=BND;MATEID=r_612_1 TR:VR 49:6 26:0 chr5 87670214 r_612_1 A A]chr5:84441291] . PASS SVTYPE=BND;MATEID=r_612_0 TR:VR 49:6 26:0 chr6 150646986 r_703 T . PASS END=150895169;SVTYPE=DUP;SVLEN=248183 TR:VR 62:4 37:0 chr6 95130272 d_827 C . PASS END=95130796;SVTYPE=DEL;SVLEN=-524 TR:VR 17:6 12:0 chrY 56838930 i_901 A . Too_low_VAF END=56838930;SVTYPE=INS;SVINSLEN=523;SVINSSEQ=CGGGAGTTTTCACCTATCTCTACACTGACCACCTAAGTGATGTAACCCTTGTCTAGTTGGAGCCTACTGGAGATTTCTGACATACCTATGCAAAGATCACCGAGGTGATGTAAATCATTTCCAGGCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCACTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTAGGCTCACTGCAAGCTCTGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCCATTTCCAGGCTTTTTGTACAGGGCACATTGTGATATATCTCTGCACTGATCACCCAAATAATGCAAATCTTCTCTAAGTTCCGCAGGAGG TR:VR 178:3 184:0 chr10 65959186 r_40 C . PASS END=69495589;SVTYPE=DUP;SVLEN=3536403 TR:VR 34:3 27:0 chr11 126544478 r_192_0 G [chr11:126620691[T . PASS SVTYPE=BND;MATEID=r_192_1 TR:VR 204:17 38:0 chr11 126620691 r_192_1 T [chr11:126544478[T . PASS SVTYPE=BND;MATEID=r_192_0 TR:VR 204:17 38:0 chr11 70377580 r_111_0 C C[chr5:128151705[ . PASS SVTYPE=BND;MATEID=r_111_1 TR:VR 80:10 45:0 chr5 128151705 r_111_1 T ]chr11:70377580]T . PASS SVTYPE=BND;MATEID=r_111_0 TR:VR 80:10 45:0 chr11 80453315 r_181 T . PASS END=127391271;SVTYPE=DEL;SVLEN=-46937956 TR:VR 120:80 37:0 chr12 57806325 r_236 A . PASS END=67808071;SVTYPE=DEL;SVLEN=-10001746 TR:VR 94:61 32:0 chr17 56928181 d_483 G . Too_small_size END=56928218;SVTYPE=DEL;SVLEN=-37 TR:VR 96:6 8:0 chr20 61724329 r_542 G . PASS END=61889196;SVTYPE=DUP;SVLEN=164867;SVINSLEN=1;SVINSSEQ=A TR:VR 65:4 31:0 chr3 157064682 r_574 G . PASS END=157185192;SVTYPE=DUP;SVLEN=120510;SVINSLEN=7;SVINSSEQ=AAAAAAA TR:VR 60:7 28:0 chr6 96420272 r_651_0 T T]chr6:98121494] . PASS SVTYPE=BND;MATEID=r_651_1 TR:VR 20:6 39:0 chr6 98121494 r_651_1 T T]chr6:96420272] . PASS SVTYPE=BND;MATEID=r_651_0 TR:VR 20:6 39:0 chr7 70003679 i_729 G . PASS END=70003679;SVTYPE=INS;SVINSLEN=137;SVINSSEQ=TTATATATGAATATATATAATATATATGAATGTTATATATGAATATATAATATATATGAATGTGTTATATATGAATATATATAATATATATAGAGATGTATTATATATATGAATATATATAATATAGATATGAATAT TR:VR 22:3 11:0 chrY 56838930 i_902 A . Too_low_VAF END=56838930;SVTYPE=INS;SVINSLEN=523;SVINSSEQ=CGGGAGTTTTCACCTATCTCTACACTGACCACCTAAGTGATGTAACCCTTGTCTAGTTGGAGCCTACTGGAGATTTCTGACATACCTATGCAAAGATCACCGAGGTGATGTAAATCATTTCCAGGCTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCACTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTAGGCTCACTGCAAGCTCTGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCCATTTCCAGGCTTTTTGTACAGGGCACATTGTGATATATCTCTGCACTGATCACCCAAATAATGCAAATCTTCTCTAAGTTCTGCAGGAGG TR:VR 178:3 184:0 chr10 68158423 r_41 C . PASS END=76423377;SVTYPE=DUP;SVLEN=8264954 TR:VR 29:7 30:0 chr11 70416621 r_112 T . PASS END=80877273;SVTYPE=DUP;SVLEN=10460652 TR:VR 123:11 30:0 chr14 52215072 i_195 A . PASS END=52215153;SVTYPE=INS;SVINSLEN=1954;SVINSSEQ=ATTGCAGGTACTCAAACTCCAGCCTGCTCTTCCCTTTCTTGGTCATTGGGACGGCATGTACTGAGAAAAGTCTCCCCCAGTCTGTGATCCTAAGTCCCTGTGATGAGCAGAGCCCCTCCTGCCAATCCATGTTAGACATGGAATGAGCAGGACATAAACCTTTGTTACTTTAAATCGCTGACATTAAAAAAAAAAAAAAACCTCTATGATAACCTAATTCATTCTAATAGAGGGCTATTAAGGGTACATTAAGGGCTACTGTGTACTTGGAGGAGGAAGTGGAATGAAGGTTTTTGTGCATGAGGGAGTAAAGAGAGAAGTGGTGGCCCCAAGGGAGAGGCTGGGGAGCACATTCGAGAGTGGGTCCAAGGGTCCTGGAATGGGCAGCTGGGCTCTGTCTCTGCAGGTGACTGCAGGTGACTTCCTCTGTCCCTGCAGGTGACTCTCTTTGGCAGTCAGTGGCTAGAGAATGCTGAGTCAAAAAGCAGGATGCTTGCAAGGGAATTATTCATGTGCCGAAGAACTCAGTAGAACCACAGAACTGACCTAGTCCAAGAAGCCTGTGCCAAAGAAGGTTCCAGGTTCAGGGGAATGCTCACTGCTAACAATTCCAGGTGCTGGACACATTCACAGGAAGATGGATTCATGGTCTGCATTAATCTGGGTCTCTAAGAAGCAGATGCTATAAGGAGATTAAGATAAGCAAGAGATTTGTTAGCACAACACCAATGAGAAAAAATGGGGAGGGAGCCGGAGCCTAAGGAGGTGGGAAGAACAATCAGGCCACAGTGAGTCCTGAGGTCTCTGAAGGAGATGGGGAAGGAAGGGAGGGAGGGAGGCCTTCGACTGTTGTGCAGCTCTAGGAAAATTTCAGCATGACTGATGAGTCTTCGAGCCAAAAATCACTCTTTAGCGGAATCCTATGTTTCTCATGTCTTAGTATCCTTGCCACAGTTACGACTGGCTGGACTAAGGCCCTAGAAAGCATGGGCTGGGCTTAATGCTGTGAGGAATTTCAGACAGCAGCACTGAGACCCTCAGTTAACAATGCTCCCGTGGTAGAAGATCTGAGAGGAGAATTTCCAAAGAAACCACACAGTTGCCACACCATCCTTTATACCACTTACAAAAGTCTAATAGGAAGAAGATTGATTATTACCCATAACATGCAGAACATTATCTTGGTGCTAATAATCCTATCATATATTTGTTTCAAGGTTTACAGCTTATCCTGGGCTTTCACATATCTCTTCTCATTTGAAATGGTCAGGGTGGCATTCCCTCCATTATAATGGTGGGAATCCTGAAGCTCCCTAGGGCATCTGACCATGCAGAGGGGAGTAGAACCAAGCACTTGGCTCTTTCACCCTTGTCCAGGGCTCAGTCCACTGTATAATAGAAACACCTGCTGACAGCCAGTGCTCCCAACATGTTGGTCATGTCTTTAAATGAAAATTAATCTTGGCCAGGCACACTGCCTCACGTATGTAATCCCAGCACTTTAGAAGGCCGAGGCGGGTGGATCACCTGAGGTCAGGAGTTTGAGAGCAGCCTGGCCAACATGGTGAAACCCGGTCTCTACTAAATATACAAAAATTAGCCGGGCGTGGGCACACACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCACGAGGCAGAGGTTGCAGTGAGCTGAGCTTGCGCCATTGCACTCCAGCCTGGGCAACAAGAGTGAAACTCCATATCAAAAAAAAAAAGAAAAAGAAAATTAGTGTCAGGCTACTTGCTTAATAGACTGCTCCAGAAAGAAAATACACTTCAAGAAGGCTCCTCCTTTGTTTGTTCTGTCAGTAGAGGTAGCATTTATAGGATGAGAACAAATCAAACATAAAACCAAGGGGTTAATTTGATAAGGTGAGTCTGCCCTGCTTGCTTTTGGTTAATTGCTTTTTAGGA TR:VR 94:29 20:0 chr17 57092229 r_456_0 A [chr17:61798327[A . Too_low_VAF SVTYPE=BND;MATEID=r_456_1 TR:VR 304:9 26:0 chr17 61798327 r_456_1 A [chr17:57092229[A . Too_low_VAF SVTYPE=BND;MATEID=r_456_0 TR:VR 304:9 26:0 chr17 82607525 d_498 A . Too_small_size END=82607560;SVTYPE=DEL;SVLEN=-35 TR:VR 36:8 18:0 chr3 96920736 r_569_0 T [chr3:97606029[A . PASS SVTYPE=BND;MATEID=r_569_1 TR:VR 55:3 38:0 chr3 97606029 r_569_1 A [chr3:96920736[A . PASS SVTYPE=BND;MATEID=r_569_0 TR:VR 55:3 38:0 chr4 68346183 d_745 A . PASS END=68346272;SVTYPE=DEL;SVLEN=-89 TR:VR 31:8 9:0 chr6 96858657 r_652_0 T [chr6:102704248[A . PASS SVTYPE=BND;MATEID=r_652_1 TR:VR 51:15 24:0 chr6 102704248 r_652_1 A [chr6:96858657[A . PASS SVTYPE=BND;MATEID=r_652_0 TR:VR 51:15 24:0 chr1 156208540 r_14 A . PASS END=156831932;SVTYPE=DUP;SVLEN=623392 TR:VR 68:4 42:0 chr10 116862807 r_84 G . PASS END=117037060;SVTYPE=DUP;SVLEN=174253 TR:VR 32:7 32:0 chr11 128364726 r_194_0 C C]chr11:131400453] . PASS SVTYPE=BND;MATEID=r_194_1 TR:VR 59:5 25:0 chr11 131400453 r_194_1 G G]chr11:128364726] . PASS SVTYPE=BND;MATEID=r_194_0 TR:VR 59:5 25:0 chr11 70509184 r_113_0 A ]chr14:50616476]T . Too_low_VAF SVTYPE=BND;MATEID=r_113_1 TR:VR 250:7 29:0 chr14 50616476 r_113_1 T T[chr11:70509184[ . Too_low_VAF SVTYPE=BND;MATEID=r_113_0 TR:VR 250:7 29:0 chr11 80877825 r_182_0 A [chr13:21224840[CT . PASS SVTYPE=BND;MATEID=r_182_1;SVINSLEN=1;SVINSSEQ=C TR:VR 88:14 29:0 chr13 21224840 r_182_1 T [chr11:80877825[GT . PASS SVTYPE=BND;MATEID=r_182_0;SVINSLEN=1;SVINSSEQ=G TR:VR 88:14 29:0 chr12 21917867 r_202_0 A ]chr17:68528067]T . PASS SVTYPE=BND;MATEID=r_202_1 TR:VR 83:31 39:0 chr17 68528067 r_202_1 T T[chr12:21917867[ . PASS SVTYPE=BND;MATEID=r_202_0 TR:VR 83:31 39:0 chr13 19819689 r_280_0 T T]chr13:19884072] . PASS SVTYPE=BND;MATEID=r_280_1 TR:VR 43:7 31:0 chr13 19884072 r_280_1 T T]chr13:19819689] . PASS SVTYPE=BND;MATEID=r_280_0 TR:VR 43:7 31:0 chr14 27318767 r_320 G . Too_low_VAF END=59214518;SVTYPE=DEL;SVLEN=-31895751 TR:VR 352:7 36:0 chr14 52223144 r_373_0 T T]chr17:63937969] . PASS SVTYPE=BND;MATEID=r_373_1 TR:VR 243:27 41:0 chr17 63937969 r_373_1 A A]chr14:52223144] . PASS SVTYPE=BND;MATEID=r_373_0 TR:VR 243:27 41:0 chr3 97104532 r_570 C . PASS END=97466376;SVTYPE=DUP;SVLEN=361844 TR:VR 44:9 47:0 chr6 96891718 r_653_0 C C]chr6:101828740] . PASS SVTYPE=BND;MATEID=r_653_1 TR:VR 54:16 29:0 chr6 101828740 r_653_1 C C]chr6:96891718] . PASS SVTYPE=BND;MATEID=r_653_0 TR:VR 54:16 29:0 chr10 120812269 r_85 T . PASS END=120911383;SVTYPE=DUP;SVLEN=99114 TR:VR 56:10 29:0 chr11 70697426 r_114_0 C ]chr17:61701826]G . Too_low_VAF SVTYPE=BND;MATEID=r_114_1 TR:VR 276:8 34:0 chr17 61701826 r_114_1 G G[chr11:70697426[ . Too_low_VAF SVTYPE=BND;MATEID=r_114_0 TR:VR 276:8 34:0 chr12 22470901 r_203_0 G G[chr5:128046053[ . PASS SVTYPE=BND;MATEID=r_203_1 TR:VR 67:7 34:0 chr5 128046053 r_203_1 C ]chr12:22470901]C . PASS SVTYPE=BND;MATEID=r_203_0 TR:VR 67:7 34:0 chr13 19820703 r_281_0 C [chr13:23307310[C . PASS SVTYPE=BND;MATEID=r_281_1 TR:VR 55:11 29:0 chr13 23307310 r_281_1 C [chr13:19820703[C . PASS SVTYPE=BND;MATEID=r_281_0 TR:VR 55:11 29:0 chr14 27370396 r_321_0 C CC]chr17:62466489] . PASS SVTYPE=BND;MATEID=r_321_1;SVINSLEN=1;SVINSSEQ=C TR:VR 271:40 34:0 chr17 62466489 r_321_1 A AG]chr14:27370396] . PASS SVTYPE=BND;MATEID=r_321_0;SVINSLEN=1;SVINSSEQ=G TR:VR 271:40 34:0 chr14 52223769 r_374_0 G [chr17:60536590[ATT . PASS SVTYPE=BND;MATEID=r_374_1;SVINSLEN=2;SVINSSEQ=AT TR:VR 339:28 31:0 chr17 60536590 r_374_1 T [chr14:52223769[ATT . PASS SVTYPE=BND;MATEID=r_374_0;SVINSLEN=2;SVINSSEQ=AT TR:VR 339:28 31:0 chr17 1639534 d_468 C . PASS END=1639611;SVTYPE=DEL;SVLEN=-77 TR:VR 30:13 24:0 chr17 57683744 r_457 G . PASS END=63845521;SVTYPE=DUP;SVLEN=6161777 TR:VR 409:73 33:0 chr17 83244873 r_494_0 A A]chr5:15924431] . PASS SVTYPE=BND;MATEID=r_494_1 TR:VR 38:4 29:0 chr5 15924431 r_494_1 A A]chr17:83244873] . PASS SVTYPE=BND;MATEID=r_494_0 TR:VR 38:4 29:0 chr3 1652877 r_554_0 T [chr3:5261708[A . PASS SVTYPE=BND;MATEID=r_554_1 TR:VR 46:9 30:0 chr3 5261708 r_554_1 A [chr3:1652877[A . PASS SVTYPE=BND;MATEID=r_554_0 TR:VR 46:9 30:0 chr4 73786903 r_583 T . PASS END=76569359;SVTYPE=DUP;SVLEN=2782456 TR:VR 55:6 45:0 chr5 26330324 r_595 A . PASS END=37024383;SVTYPE=DEL;SVLEN=-10694059 TR:VR 67:9 37:0 chr5 95305937 r_613 G . PASS END=95449548;SVTYPE=DUP;SVLEN=143611 TR:VR 51:3 30:0 chr6 155099929 r_705_0 T T]chr6:155806480] . PASS SVTYPE=BND;MATEID=r_705_1 TR:VR 73:28 30:0 chr6 155806480 r_705_1 T T]chr6:155099929] . PASS SVTYPE=BND;MATEID=r_705_0 TR:VR 73:28 30:0 chr6 98078118 r_655 T . PASS END=144182886;SVTYPE=DUP;SVLEN=46104768 TR:VR 45:22 33:0 chr1 160471080 d_159 C . PASS END=160475421;SVTYPE=DEL;SVLEN=-4341 TR:VR 40:5 15:0 chr11 70700266 r_115_0 C C[chr14:50240619[ . Too_low_VAF SVTYPE=BND;MATEID=r_115_1 TR:VR 179:5 25:0 chr14 50240619 r_115_1 G ]chr11:70700266]G . Too_low_VAF SVTYPE=BND;MATEID=r_115_0 TR:VR 179:5 25:0 chr11 93035137 r_183 A . PASS END=93104636;SVTYPE=DUP;SVLEN=69499 TR:VR 44:10 26:0 chr12 22512378 r_204_0 T ]chr6:36363973]A . PASS SVTYPE=BND;MATEID=r_204_1 TR:VR 69:9 27:0 chr6 36363973 r_204_1 A A[chr12:22512378[ . PASS SVTYPE=BND;MATEID=r_204_0 TR:VR 69:9 27:0 chr13 21296995 r_282_0 A A]chr13:28804476] . PASS SVTYPE=BND;MATEID=r_282_1 TR:VR 65:18 39:0 chr13 28804476 r_282_1 A A]chr13:21296995] . PASS SVTYPE=BND;MATEID=r_282_0 TR:VR 65:18 39:0 chr14 27370966 r_322_0 G G[chr17:60660766[ . PASS SVTYPE=BND;MATEID=r_322_1 TR:VR 414:47 28:0 chr17 60660766 r_322_1 A ]chr14:27370966]A . PASS SVTYPE=BND;MATEID=r_322_0 TR:VR 414:47 28:0 chr14 52224001 r_375_0 C C]chr17:60576889] . PASS SVTYPE=BND;MATEID=r_375_1 TR:VR 332:28 31:0 chr17 60576889 r_375_1 T T]chr14:52224001] . PASS SVTYPE=BND;MATEID=r_375_0 TR:VR 332:28 31:0 chr3 1652881 r_555_0 T T]chr3:1652983] . PASS SVTYPE=BND;MATEID=r_555_1 TR:VR 38:8 12:0 chr3 1652983 r_555_1 A A]chr3:1652881] . PASS SVTYPE=BND;MATEID=r_555_0 TR:VR 38:8 12:0 chr5 26603807 r_596 T . PASS END=36991985;SVTYPE=DUP;SVLEN=10388178 TR:VR 69:11 30:0 chr7 72807764 r_711 A . PASS END=74794353;SVTYPE=DUP;SVLEN=1986589 TR:VR 41:9 27:0 chr1 161132028 r_15 C . Too_low_VAF END=161447675;SVTYPE=DUP;SVLEN=315647 TR:VR 114:3 61:0 chr10 74042676 r_42_0 T [chr10:77026355[A . PASS SVTYPE=BND;MATEID=r_42_1 TR:VR 113:85 36:0 chr10 77026355 r_42_1 A [chr10:74042676[A . PASS SVTYPE=BND;MATEID=r_42_0 TR:VR 113:85 36:0 chr11 70701056 r_116 G . PASS END=70703771;SVTYPE=DUP;SVLEN=2715 TR:VR 87:6 15:0 chr11 9480652 r_87 G . PASS END=9772494;SVTYPE=DUP;SVLEN=291842 TR:VR 36:6 22:0 chr12 22742163 r_205_0 C C]chr14:25398578] . PASS SVTYPE=BND;MATEID=r_205_1 TR:VR 68:19 36:0 chr14 25398578 r_205_1 G G]chr12:22742163] . PASS SVTYPE=BND;MATEID=r_205_0 TR:VR 68:19 36:0 chr12 67296287 r_237_0 T [chr14:28687958[G . PASS SVTYPE=BND;MATEID=r_237_1 TR:VR 56:21 36:0 chr14 28687958 r_237_1 G [chr12:67296287[G . PASS SVTYPE=BND;MATEID=r_237_0 TR:VR 56:21 36:0 chr13 21319391 r_283_0 G G]chr13:29311528] . PASS SVTYPE=BND;MATEID=r_283_1 TR:VR 51:16 37:0 chr13 29311528 r_283_1 A A]chr13:21319391] . PASS SVTYPE=BND;MATEID=r_283_0 TR:VR 51:16 37:0 chr14 27374619 r_323_0 A [chr17:62465738[T . PASS SVTYPE=BND;MATEID=r_323_1 TR:VR 235:42 33:0 chr17 62465738 r_323_1 T [chr14:27374619[T . PASS SVTYPE=BND;MATEID=r_323_0 TR:VR 235:42 33:0 chr15 19821806 i_229 C . PASS END=19821809;SVTYPE=INS;SVINSLEN=57;SVINSSEQ=AACCAAACTAAAGTTTTAACTCTGTGAAATGAATGCACACATCACAAAGTAGTTTCT TR:VR 24:4 23:0 chr17 59974490 r_459 T . Too_low_VAF END=60260122;SVTYPE=DUP;SVLEN=285632 TR:VR 596:8 41:0 chr18 80075980 r_506 G . PASS END=80188695;SVTYPE=DUP;SVLEN=112715 TR:VR 48:3 19:0 chr20 62127482 r_543 A . PASS END=62145329;SVTYPE=DEL;SVLEN=-17847;SVINSLEN=2;SVINSSEQ=CT TR:VR 41:5 18:0 chr3 1652998 r_556 T . PASS END=2302037;SVTYPE=DUP;SVLEN=649039 TR:VR 50:9 23:0 chr6 98084897 r_656_0 C C]chr6:98085050] . PASS SVTYPE=BND;MATEID=r_656_1 TR:VR 23:11 22:0 chr6 98085050 r_656_1 A A]chr6:98084897] . PASS SVTYPE=BND;MATEID=r_656_0 TR:VR 23:11 22:0 chr8 66439604 r_721 G . PASS END=66641014;SVTYPE=DUP;SVLEN=201410;SVINSLEN=3;SVINSSEQ=ACT TR:VR 64:11 30:0 chr1 161896739 r_16 C . PASS END=162225425;SVTYPE=DUP;SVLEN=328686 TR:VR 54:3 26:0 chr10 74058683 d_204 A . PASS END=74060092;SVTYPE=DEL;SVLEN=-1409 TR:VR 107:12 19:0 chr11 129538490 r_195 A . PASS END=129899667;SVTYPE=DUP;SVLEN=361177 TR:VR 64:6 26:0 chr11 70701830 r_117_0 G GACA]chr17:60357222] . Too_low_VAF SVTYPE=BND;MATEID=r_117_1;SVINSLEN=3;SVINSSEQ=ACA TR:VR 369:6 32:0 chr17 60357222 r_117_1 G GTGT]chr11:70701830] . Too_low_VAF SVTYPE=BND;MATEID=r_117_0;SVINSLEN=3;SVINSSEQ=TGT TR:VR 369:6 32:0 chr12 67296691 r_238_0 T T[chr14:22605784[ . PASS SVTYPE=BND;MATEID=r_238_1 TR:VR 46:20 33:0 chr14 22605784 r_238_1 C ]chr12:67296691]C . PASS SVTYPE=BND;MATEID=r_238_0 TR:VR 46:20 33:0 chr13 21969781 r_284_0 G [chr13:23309723[C . PASS SVTYPE=BND;MATEID=r_284_1 TR:VR 57:11 29:0 chr13 23309723 r_284_1 C [chr13:21969781[C . PASS SVTYPE=BND;MATEID=r_284_0 TR:VR 57:11 29:0 chr14 27375942 r_324_0 T T]chr17:57746667] . PASS SVTYPE=BND;MATEID=r_324_1 TR:VR 252:39 35:0 chr17 57746667 r_324_1 C C]chr14:27375942] . PASS SVTYPE=BND;MATEID=r_324_0 TR:VR 252:39 35:0 chr14 52688646 r_376 A . Too_low_VAF END=52803493;SVTYPE=DUP;SVLEN=114847;SVINSLEN=3;SVINSSEQ=CCC TR:VR 98:3 27:0 chr17 59975168 r_460 G . Too_low_VAF END=60239710;SVTYPE=DEL;SVLEN=-264542 TR:VR 581:6 30:0 chr22 12526198 d_682 T . PASS END=12526555;SVTYPE=DEL;SVLEN=-357 TR:VR 48:3 41:1 chr3 167153433 r_575 A . PASS END=167219101;SVTYPE=DUP;SVLEN=65668 TR:VR 51:4 32:0 chr4 82231199 r_584 T . PASS END=82718860;SVTYPE=DUP;SVLEN=487661;SVINSLEN=3;SVINSSEQ=TGG TR:VR 46:5 31:0 chr6 100608768 i_688 T . PASS END=100608770;SVTYPE=INS;SVINSLEN=253;SVINSSEQ=TTTATATATATACTTTATATATATATATATATACTTTATATATATTTTATATATATATATTATATATATATATATTTATTTTTTATATATATACTTTATATATATAATTTATATATATATATTATATATATACTTTATATATATATACTATATATTATATATATTATACTATATATATATTTATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT TR:VR 52:6 13:0 chr10 74080609 r_43_0 T TCAGCACACCACTTTCTAATGACCTTTTCCTCCACTCCAGAG]chr6:150535314] . PASS SVTYPE=BND;MATEID=r_43_1;SVINSLEN=41;SVINSSEQ=CAGCACACCACTTTCTAATGACCTTTTCCTCCACTCCAGAG TR:VR 129:19 20:0 chr6 150535314 r_43_1 G GCTCTGGAGTGGAGGAAAAGGTCATTAGAAAGTGGTGTGCTG]chr10:74080609] . PASS SVTYPE=BND;MATEID=r_43_0;SVINSLEN=41;SVINSSEQ=CTCTGGAGTGGAGGAAAAGGTCATTAGAAAGTGGTGTGCTG TR:VR 129:19 20:0 chr11 130092733 r_196_0 G GAGAGGAGAGC]chr8:108123708] . Too_low_VAF SVTYPE=BND;MATEID=r_196_1;SVINSLEN=10;SVINSSEQ=AGAGGAGAGC TR:VR 68:3 19:0 chr8 108123708 r_196_1 G GGCTCTCCTCT]chr11:130092733] . Too_low_VAF SVTYPE=BND;MATEID=r_196_0;SVINSLEN=10;SVINSSEQ=GCTCTCCTCT TR:VR 68:3 19:0 chr11 70701867 r_118_0 C ]chr17:61163086]CCATCTCACACCAGTTAGAATGGCGATCATTAAAATGTCAGTAAACAAA . Too_low_VAF SVTYPE=BND;MATEID=r_118_1;SVINSLEN=48;SVINSSEQ=CCATCTCACACCAGTTAGAATGGCGATCATTAAAATGTCAGTAAACAA TR:VR 318:4 29:0 chr17 61163086 r_118_1 A ATTGTTTACTGACATTTTAATGATCGCCATTCTAACTGGTGTGAGATGG[chr11:70701867[ . Too_low_VAF SVTYPE=BND;MATEID=r_118_0;SVINSLEN=48;SVINSSEQ=TTGTTTACTGACATTTTAATGATCGCCATTCTAACTGGTGTGAGATGG TR:VR 318:4 29:0 chr12 68289287 r_239 C . Too_low_VAF END=69254334;SVTYPE=DEL;SVLEN=-965047 TR:VR 178:8 35:0 chr13 21990628 r_285 C . PASS END=22011618;SVTYPE=DEL;SVLEN=-20990 TR:VR 39:5 28:0 chr14 27387290 r_325_0 T T]chr14:59897140] . PASS SVTYPE=BND;MATEID=r_325_1 TR:VR 185:141 37:0 chr14 59897140 r_325_1 T T]chr14:27387290] . PASS SVTYPE=BND;MATEID=r_325_0 TR:VR 185:141 37:0 chr14 52691345 d_311 C . PASS END=52691710;SVTYPE=DEL;SVLEN=-365;SVINSLEN=2;SVINSSEQ=AT TR:VR 51:3 12:0 chr17 19804628 r_422 A . PASS END=19923101;SVTYPE=DUP;SVLEN=118473 TR:VR 62:7 32:0 chr17 59976904 r_461_0 C [chr17:60252986[G . Too_low_VAF SVTYPE=BND;MATEID=r_461_1 TR:VR 584:7 32:0 chr17 60252986 r_461_1 G [chr17:59976904[G . Too_low_VAF SVTYPE=BND;MATEID=r_461_0 TR:VR 584:7 32:0 chr18 9263145 r_497 T . PASS END=9507770;SVTYPE=DUP;SVLEN=244625 TR:VR 39:8 33:0 chr3 175702854 r_576 G . PASS END=176135399;SVTYPE=DUP;SVLEN=432545 TR:VR 53:5 39:0 chr4 83561476 r_585 C . PASS END=84708535;SVTYPE=DUP;SVLEN=1147059;SVINSLEN=2;SVINSSEQ=AG TR:VR 52:7 32:0 chr5 36008587 r_597_0 T [chr5:36008995[TGTTAATGTTGAAATGAGTTACGACTGGTTGGGAAGACATGATTGTATTTC . PASS SVTYPE=BND;MATEID=r_597_1;SVINSLEN=50;SVINSSEQ=TGTTAATGTTGAAATGAGTTACGACTGGTTGGGAAGACATGATTGTATTT TR:VR 29:23 14:0 chr5 36008995 r_597_1 C [chr5:36008587[AAATACAATCATGTCTTCCCAACCAGTCGTAACTCATTTCAACATTAACAC . PASS SVTYPE=BND;MATEID=r_597_0;SVINSLEN=50;SVINSSEQ=AAATACAATCATGTCTTCCCAACCAGTCGTAACTCATTTCAACATTAACA TR:VR 29:23 14:0 chr10 74175958 d_205 C . PASS END=74176064;SVTYPE=DEL;SVLEN=-106 TR:VR 105:6 18:0 chr11 130893743 r_197 G . PASS END=131025877;SVTYPE=DUP;SVLEN=132134;SVINSLEN=2;SVINSSEQ=AA TR:VR 75:7 34:0 chr11 70702989 r_119 A . Too_low_VAF END=73535295;SVTYPE=DEL;SVLEN=-2832306 TR:VR 148:3 29:0 chr12 68437330 r_240_0 G G]chr12:68441149] . PASS SVTYPE=BND;MATEID=r_240_1 TR:VR 75:5 20:0 chr12 68441149 r_240_1 T T]chr12:68437330] . PASS SVTYPE=BND;MATEID=r_240_0 TR:VR 75:5 20:0 chr13 22033619 r_286_0 C C]chr13:22132580] . PASS SVTYPE=BND;MATEID=r_286_1 TR:VR 43:9 31:0 chr13 22132580 r_286_1 T T]chr13:22033619] . PASS SVTYPE=BND;MATEID=r_286_0 TR:VR 43:9 31:0 chr14 31083851 r_326 T . PASS END=49242801;SVTYPE=DUP;SVLEN=18158950 TR:VR 146:8 30:0 chr14 52811976 r_377_0 C C]chr17:56097509] . PASS SVTYPE=BND;MATEID=r_377_1 TR:VR 102:18 33:0 chr17 56097509 r_377_1 C C]chr14:52811976] . PASS SVTYPE=BND;MATEID=r_377_0 TR:VR 102:18 33:0 chr17 60000514 r_462_0 A [chr17:61068042[G . Too_low_VAF SVTYPE=BND;MATEID=r_462_1 TR:VR 490:13 35:0 chr17 61068042 r_462_1 G [chr17:60000514[G . Too_low_VAF SVTYPE=BND;MATEID=r_462_0 TR:VR 490:13 35:0 chr19 1016456 r_508 A . PASS END=1383465;SVTYPE=DUP;SVLEN=367009 TR:VR 54:4 32:0 chr1_KI270712v1_random 90449 d_548 C . PASS END=90940;SVTYPE=DEL;SVLEN=-491;SVINSLEN=243;SVINSSEQ=TCATCATTTCATCATTTCATCTCGTTTCATCTCATTTCATCTCATCTCACCTCATATCATCATTTCATCTCATCCTTTCATTTCATCTCATCGTTTCATCTCCTCATTTCATCTCATCTCACCTCAGCATTTCATTTCACCTCATCATTTCTTATTTCATCTCATTTTATCTCATTTCATCTCATATCTCAATTCAATTTCCTTTCATTATTTCATCTCATTCATTTCATCTCATTTCATTAC TR:VR 21:3 12:0 chr2 30758798 i_405 T . PASS END=30758798;SVTYPE=INS;SVINSLEN=63;SVINSSEQ=CCTCCCTCCCTCCCTCCCTTTCCTTCCTCCCTCCCTTCCCTCCCTCCCTCCCTTCCTCCCTCC TR:VR 30:11 11:0 chr22 12528464 d_683 T . PASS END=12528568;SVTYPE=INS;SVINSLEN=104;SVINSSEQ=CATTCTGAGATAATTTATTTTGATGTGTGCATTCATCTCACAGTGTTGAACTTTTCTTTTGATTCAGCAGCTTTATAACATGCTCTTAGTAGAATATGCAAGTA TR:VR 60:4 43:1 chr3 182596035 r_577 C . PASS END=183517025;SVTYPE=DUP;SVLEN=920990 TR:VR 49:3 40:0 chr4 12114385 r_579 G . PASS END=12314743;SVTYPE=DUP;SVLEN=200358 TR:VR 42:9 34:0 chr5 36009096 d_798 G . PASS END=36009579;SVTYPE=DEL;SVLEN=-483 TR:VR 30:22 15:0 chr6 100656701 r_657 A . PASS END=137567356;SVTYPE=DEL;SVLEN=-36910655 TR:VR 116:8 41:0 chr7 117917766 d_845 T . PASS END=117919169;SVTYPE=DEL;SVLEN=-1403 TR:VR 30:4 17:0 chrX 123954625 r_742 G . PASS END=124532047;SVTYPE=DUP;SVLEN=577422 TR:VR 58:7 28:0 chr10 74197975 r_44 G . PASS END=76273331;SVTYPE=DUP;SVLEN=2075356 TR:VR 154:12 43:0 chr11 70703051 r_120_0 C [chr11:71479353[C . Too_low_VAF SVTYPE=BND;MATEID=r_120_1 TR:VR 154:5 22:0 chr11 71479353 r_120_1 C [chr11:70703051[C . Too_low_VAF SVTYPE=BND;MATEID=r_120_0 TR:VR 154:5 22:0 chr12 68440425 r_241_0 A [chr8:38302416[A . PASS SVTYPE=BND;MATEID=r_241_1 TR:VR 85:5 36:0 chr8 38302416 r_241_1 A [chr12:68440425[A . PASS SVTYPE=BND;MATEID=r_241_0 TR:VR 85:5 36:0 chr13 22119287 r_287 G . PASS END=22134730;SVTYPE=DUP;SVLEN=15443 TR:VR 24:12 22:0 chr14 31250094 r_327 G . PASS END=31364582;SVTYPE=DUP;SVLEN=114488;SVINSLEN=20;SVINSSEQ=CCCCAGGAAAGCAGGACTTG TR:VR 125:7 36:0 chr14 52928386 r_378_0 C ]chr17:54880172]A . PASS SVTYPE=BND;MATEID=r_378_1 TR:VR 299:50 41:0 chr17 54880172 r_378_1 A A[chr14:52928386[ . PASS SVTYPE=BND;MATEID=r_378_0 TR:VR 299:50 41:0 chr17 60166086 r_463 G . Too_low_VAF END=60339103;SVTYPE=DUP;SVLEN=173017 TR:VR 597:7 23:0 chr19 1141996 i_367 G . PASS END=1142017;SVTYPE=INS;SVINSLEN=277;SVINSSEQ=TCTCAATGACCTCCTTCCCCAAGATCAACCCCTCCTCAATGACCTCCCCCCATGATCAACCCTCCTCAATGACCTCACTCATGATCAACCCTCCCCTCAATGACCTCCCTTCCCATGATCAACCCTCCCTCAATGACCTCCCTCACAATCAATCCTCCTCAATGACCCTCCTTCCCCATGATCAACCCTCCCTCAATGACCTCCTTCCCCAAGATCAACCCTCCCCTCAATGGCCTCCCTCCCCACGATCAACCCTCCCCTCAATGGCCTCCCTCCC TR:VR 18:3 22:0 chr20 63167409 i_497 C . PASS END=63167409;SVTYPE=INS;SVINSLEN=1035;SVINSSEQ=TGACACTCATGGTGTCGGTTACCGTGTGCTCTCCCCACGGCCTCACAGCCCCCACCTCCGCCCCCCTCCTCTCAGCCCCCACCTCCACCCTCCTCTGACCCACCTCCCTTCCGCTCCCCCCCACCTCCAGCCCCCCTCCTTCGGCCCCCACCTCTGCCCACTCCTTCCCAGCCCCACCTCCAGCCCCCACCTCCGCCCCCACCTCCAGCCCCACCTCCGCCCCCACCTCCGCCCCCATATTCTCCCTCCTCATTGCCTCAGCTACCTCTTCCACCTTAGCCCCCCACCTCGGCCCCACTACCCCCACCTCACTCAGCCCCCACCTCCACCCACACCCCTTGACCCCCACCTCCTTAGCCCCCACCTCCCCCTCCTCGGCCCCCCACCCTCTGCCCCACCTCGGCCCTCCTCTGACCCCACCTCCAGGCCCCACCTCCAGACCCCACCTCCCGCCCCCACCTCCCAGCCCCCCACCTCCGCCCCTCCTCCGTGGCCCCACCTCCCCCCCACCCACCTCCGCCCCCACCTCCTTCCCCTCCCACTCAGCCCCACTCCCTTCCCCACCTCCCGCCCCCACCTCCGCCCCCTCCTCCGCCCCCACCTCAGCCCCCACCTCCGCCCCCTCCTCCTCAGCCCCCACCTCCTCCCCCCCTCCGCCCCCACCTCCGCCCCCTCCTCAGCCCCCACCTCCCCCCCACCTCCGCCCCACCTCCGCCCTCCTCAGCCCCCACCTCTGCCCCCACCTCAGACCCCACCTCCGCCCCCCCACCTCAGCCCCCACCTCCCCCCCTCCTCCAGCCCCCCACCTCCGCCCCCACCTCCGCCCCCTCCTCAGCCCCCACCTCCCCCCACCTCCGCCCCCACCTCCGCCCCCTCCTCCAGCCCCCACCTCCGCCCCCCGCCCCCACCTCCGCCCCTCCCTCCGCCCCCACCTCAGCCCCCACCTCCGCCCCCTCCTCAGCCCCCACCTCCCCCCACCCTCCGCCCCCACCTCCGCCCCCTCTCCTCAGCCCCCACCTCTGCCCCTCCTCAGCC TR:VR 32:4 14:0 chr22 16576520 r_548 A . PASS END=16601478;SVTYPE=DUP;SVLEN=24958 TR:VR 29:4 34:0 chr3 185454242 i_564 G . PASS END=185454242;SVTYPE=INS;SVINSLEN=238;SVINSSEQ=ATATATATATGATACATATATATGAGATATATATATGATACATATATATGAGATATATATATGATACATATATATGAGATATATATATGATACATATATATGAGATATATATATATACATATATATGAGATATATATATGATACATATATATAGATGATATATATATGATACATATATATGAGAATATATATATGATACATATATATGAGATATATATATGATACATATACATATATA TR:VR 69:5 25:0 chr5 37024723 r_598_0 G G]chr5:37025048] . PASS SVTYPE=BND;MATEID=r_598_1 TR:VR 56:9 18:0 chr5 37025048 r_598_1 A A]chr5:37024723] . PASS SVTYPE=BND;MATEID=r_598_0 TR:VR 56:9 18:0 chr6 101043785 r_658_0 A A]chr6:137605053] . Too_low_VAF SVTYPE=BND;MATEID=r_658_1 TR:VR 72:3 32:0 chr6 137605053 r_658_1 C C]chr6:101043785] . Too_low_VAF SVTYPE=BND;MATEID=r_658_0 TR:VR 72:3 32:0 chr7 126885973 r_712 A . PASS END=127044343;SVTYPE=DUP;SVLEN=158370 TR:VR 51:7 37:0 chrX 125563094 i_884 T . PASS END=125563098;SVTYPE=INS;SVINSLEN=239;SVINSSEQ=CACTGCAAGCCTCCCAGGTTTAAGCGATTCTCCCGCCTCAGCTTCCAGAGTAGTTGGGACTACAGGCACACGCCACCACACCCAGCTAATTTTTATATGTTTAATAGAGATGGGGTCTCACTATGTTGGCCAGGATGGTCTTGATCTTTTGACCTCGTGATCTGCCCGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTCAGGCACCGCGCCCAGCCAAGGAGGCTTTTTTAAAAA TR:VR 16:3 17:0 chr1 173622656 i_24 T . PASS END=173622656;SVTYPE=INS;SVINSLEN=320;SVINSSEQ=TAAGGTGCTTTGAAGACTTTTTTTCCTTTTTTTCTTTTTGAGATGGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCAAGATCTTGGCTCACTGCAATCTTTGCCTCTGGGGTTCAAATGGTTCTCCTGCTTCAGCCTCCCATGTAGCTGGGACTACAGGTGCCTGCCACCACACCCAGTTAATTTTTGTATTTTTACTAGAGACGGGGTTTCACCATTTTGGCCAGGCTGGCCTCGAACTCCTGACCTCAGGTGATCCACCCACCTCAGCCTCCCAAAGTGCTGAGATTATAGACATGAGCCACTGCGCCCAAC TR:VR 35:3 13:0 chr10 74318055 r_45_0 C C]chr10:74340610] . PASS SVTYPE=BND;MATEID=r_45_1 TR:VR 183:11 24:0 chr10 74340610 r_45_1 T T]chr10:74318055] . PASS SVTYPE=BND;MATEID=r_45_0 TR:VR 183:11 24:0 chr11 70732567 r_121_0 G [chr11:73874206[G . PASS SVTYPE=BND;MATEID=r_121_1 TR:VR 187:15 31:0 chr11 73874206 r_121_1 G [chr11:70732567[G . PASS SVTYPE=BND;MATEID=r_121_0 TR:VR 187:15 31:0 chr12 2280721 i_111 G . PASS END=2280721;SVTYPE=INS;SVINSLEN=65;SVINSSEQ=TTTAACCTCTCTTGTACCTTGCTGTGCTTCTGCTTAACCTCTTGATGCCTTGCTGTGCTTGGTTT TR:VR 32:3 17:0 chr12 68975882 r_242_0 C [chr12:74346597[A . PASS SVTYPE=BND;MATEID=r_242_1 TR:VR 125:45 31:0 chr12 74346597 r_242_1 A [chr12:68975882[A . PASS SVTYPE=BND;MATEID=r_242_0 TR:VR 125:45 31:0 chr13 22134179 r_288 A . PASS END=23308360;SVTYPE=DUP;SVLEN=1174181 TR:VR 46:12 28:0 chr14 31325462 r_328 G . Too_low_VAF END=58797387;SVTYPE=DUP;SVLEN=27471925 TR:VR 135:5 34:0 chr14 52994336 r_379_0 C [chr17:61739741[C . Too_low_VAF SVTYPE=BND;MATEID=r_379_1 TR:VR 319:8 36:0 chr17 61739741 r_379_1 C [chr14:52994336[C . Too_low_VAF SVTYPE=BND;MATEID=r_379_0 TR:VR 319:8 36:0 chr17 60209659 r_464 T . Too_low_VAF END=61280957;SVTYPE=DUP;SVLEN=1071298 TR:VR 475:8 39:0 chr17_GL000205v2_random 26581 i_331 T . Too_low_VAF END=26582;SVTYPE=INS;SVINSLEN=99;SVINSSEQ=AATCAAAGCCGTGTTTGGAATCCTATGTGAGAGGAGAACATTCAGACACCCAGCAGCAAGTGTTCTGCAATCCTATGTGAAGGACAAACATTCAGACCC TR:VR 88:4 63:1 chr4 90099012 r_586 T . PASS END=90316066;SVTYPE=DUP;SVLEN=217054 TR:VR 64:5 32:0 chrX 125566073 i_885 C . PASS END=125566082;SVTYPE=INS;SVINSLEN=298;SVINSSEQ=AGGCCAGGTGCAGTGGCTCACACCTGTAATCTCAGCATTTGAGAGGCCAAGGCGGACGGATCACGAGGTCAGGAGATCGAGACGATCCTGGCTAACATGGTGAAACCCCGTCTCTATTAAAAATACAAAAAATTAGCCGGGCATGGTGGGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCATGAACCAGAGGCAGAGCTTGCAGTGAGCCAAGATCGTATCACTGCACTCCAGGATGGGTGACAGAGTGAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAT TR:VR 17:3 18:0 chr1 1748004 d_0 T . PASS END=1752744;SVTYPE=DEL;SVLEN=-4740 TR:VR 14:6 9:0 chr10 74321295 r_46_0 T ]chr6:150536203]T . PASS SVTYPE=BND;MATEID=r_46_1 TR:VR 125:8 23:0 chr6 150536203 r_46_1 T T[chr10:74321295[ . PASS SVTYPE=BND;MATEID=r_46_0 TR:VR 125:8 23:0 chr11 70807664 r_122_0 T [chr17:54934565[C . Too_low_VAF SVTYPE=BND;MATEID=r_122_1 TR:VR 341:6 19:0 chr17 54934565 r_122_1 C [chr11:70807664[C . Too_low_VAF SVTYPE=BND;MATEID=r_122_0 TR:VR 341:6 19:0 chr14 31601405 r_329 T . PASS END=31642630;SVTYPE=DUP;SVLEN=41225 TR:VR 93:6 36:0 chr14 53694997 r_380_0 A [chr17:68051497[T . PASS SVTYPE=BND;MATEID=r_380_1 TR:VR 161:40 26:0 chr17 68051497 r_380_1 T [chr14:53694997[T . PASS SVTYPE=BND;MATEID=r_380_0 TR:VR 161:40 26:0 chr17 60248104 r_465 A . Too_low_VAF END=60478751;SVTYPE=DUP;SVLEN=230647 TR:VR 565:6 29:0 chr19 14806891 r_509 T . PASS END=14879861;SVTYPE=DUP;SVLEN=72970 TR:VR 51:4 33:0 chr4 135843408 r_588 C . PASS END=135893262;SVTYPE=DUP;SVLEN=49854 TR:VR 52:5 23:0 chr5 40898879 d_800 T . PASS END=40899274;SVTYPE=DEL;SVLEN=-395 TR:VR 42:7 10:0 chr7 131724690 r_713 G . PASS END=131775022;SVTYPE=DUP;SVLEN=50332 TR:VR 49:7 33:0 chr8 89010323 r_722 G . PASS END=89073965;SVTYPE=DUP;SVLEN=63642 TR:VR 67:6 29:0 chrX 128356753 r_743 A . PASS END=128422224;SVTYPE=DUP;SVLEN=65471 TR:VR 50:6 24:0 chr10 15400031 i_50 A . PASS END=15400031;SVTYPE=INS;SVINSLEN=307;SVINSSEQ=TTTTTTTTTTTTTTTTTTGAGAGACGAGAGTCTCGCTCCGTCACCCAGGCTAGAGTGCAGTGGCGTAATCTCGGCTCACTGCAACCTTCACCTCCGGGGTTCAAGTGATTCTCCTGCTTCAGCCTTCTGAGTAGCTAGGACTACAAGTGTGTGCCACCATGCCTAATTTTTGTATTTTTAGTAGGGATGGGGTTTTGCCATGTTGGCGAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCACCCACCTGGGCCTCCTATAGTGCTGGGATTACAGGCATGAGCCACCATGCCCTACCAAAAGAAA TR:VR 44:7 16:0 chr10 74392227 r_47 A . PASS END=78698966;SVTYPE=DUP;SVLEN=4306739;SVINSLEN=1;SVINSSEQ=G TR:VR 112:11 34:0 chr11 70810176 r_123_0 C C]chr14:55044389] . PASS SVTYPE=BND;MATEID=r_123_1 TR:VR 116:7 24:0 chr14 55044389 r_123_1 A A]chr11:70810176] . PASS SVTYPE=BND;MATEID=r_123_0 TR:VR 116:7 24:0 chr12 69146768 r_243 A . PASS END=74476176;SVTYPE=DUP;SVLEN=5329408 TR:VR 173:12 35:0 chr13 27190397 r_289_0 C C]chr13:27190993] . PASS SVTYPE=BND;MATEID=r_289_1 TR:VR 27:10 19:0 chr13 27190993 r_289_1 G G]chr13:27190397] . PASS SVTYPE=BND;MATEID=r_289_0 TR:VR 27:10 19:0 chr14 31831152 r_330_0 T T]chr14:53920920] . PASS SVTYPE=BND;MATEID=r_330_1 TR:VR 196:11 31:0 chr14 53920920 r_330_1 G G]chr14:31831152] . PASS SVTYPE=BND;MATEID=r_330_0 TR:VR 196:11 31:0 chr14 53706082 r_381_0 A A[chr17:63393267[ . PASS SVTYPE=BND;MATEID=r_381_1 TR:VR 202:38 31:0 chr17 63393267 r_381_1 C ]chr14:53706082]C . PASS SVTYPE=BND;MATEID=r_381_0 TR:VR 202:38 31:0 chr17 60253171 r_466 C . Too_low_VAF END=63930417;SVTYPE=DEL;SVLEN=-3677246 TR:VR 486:7 37:0 chr7 133864909 r_714 G . PASS END=134006241;SVTYPE=DUP;SVLEN=141332 TR:VR 50:6 34:0 chr8 102579669 i_789 T . PASS END=102579722;SVTYPE=INS;SVINSLEN=181;SVINSSEQ=GAGGATCTTTATGTCCTACTGGGGCCAGAGGCTGGGAAGGCAGCTCCAGTTAGAGATGCTGATGATGATCTAGAAAGCGGTGAGGCTCACAGAAGGCAAAATGCCACCCCAGGGTCACCTGGTGGTCTGGTGAAGATGTTGGGGAGGGATCCCAGTCATTGCACTAAAAAATATTTTGGAG TR:VR 33:5 22:0 chr8 89392873 r_723_0 C C]chr8:89889086] . PASS SVTYPE=BND;MATEID=r_723_1 TR:VR 48:5 30:0 chr8 89889086 r_723_1 T T]chr8:89392873] . PASS SVTYPE=BND;MATEID=r_723_0 TR:VR 48:5 30:0 chrX 128357345 r_744 T . PASS END=128372981;SVTYPE=DEL;SVLEN=-15636 TR:VR 37:5 24:0 chr10 74409414 r_48_0 C C]chr10:74409425] . PASS SVTYPE=BND;MATEID=r_48_1 TR:VR 98:9 14:0 chr10 74409425 r_48_1 G G]chr10:74409414] . PASS SVTYPE=BND;MATEID=r_48_0 TR:VR 98:9 14:0 chr11 70926484 r_124_0 C C]chr11:71488878] . Too_low_VAF SVTYPE=BND;MATEID=r_124_1 TR:VR 167:4 24:0 chr11 71488878 r_124_1 A A]chr11:70926484] . Too_low_VAF SVTYPE=BND;MATEID=r_124_0 TR:VR 167:4 24:0 chr12 112034342 r_276 A . Too_low_VAF END=112169678;SVTYPE=DUP;SVLEN=135336;SVINSLEN=47;SVINSSEQ=TTTTCCCATTCAGTAGGGAGCATCCCTCAGCCTTGATCTTCATTTCT TR:VR 67:3 31:0 chr12 24946985 r_206_0 A [chr14:39369459[T . PASS SVTYPE=BND;MATEID=r_206_1 TR:VR 57:7 27:0 chr14 39369459 r_206_1 T [chr12:24946985[T . PASS SVTYPE=BND;MATEID=r_206_0 TR:VR 57:7 27:0 chr12 69211769 r_244_0 T [chr12:72071783[A . Too_low_VAF SVTYPE=BND;MATEID=r_244_1 TR:VR 148:6 27:0 chr12 72071783 r_244_1 A [chr12:69211769[A . Too_low_VAF SVTYPE=BND;MATEID=r_244_0 TR:VR 148:6 27:0 chr14 32506461 r_331_0 G [chr14:50653183[G . Too_low_VAF SVTYPE=BND;MATEID=r_331_1 TR:VR 251:7 29:0 chr14 50653183 r_331_1 G [chr14:32506461[G . Too_low_VAF SVTYPE=BND;MATEID=r_331_0 TR:VR 251:7 29:0 chr14 53706115 r_382_0 T ]chr17:63393271]A . PASS SVTYPE=BND;MATEID=r_382_1 TR:VR 202:38 31:0 chr17 63393271 r_382_1 A A[chr14:53706115[ . PASS SVTYPE=BND;MATEID=r_382_0 TR:VR 202:38 31:0 chr16 4895023 r_410 C . PASS END=5040729;SVTYPE=DUP;SVLEN=145706 TR:VR 47:3 26:0 chr17 60254250 r_467_0 A ACACAAGGCACCCCGA]chr17:66281318] . Too_low_VAF SVTYPE=BND;MATEID=r_467_1;SVINSLEN=15;SVINSSEQ=CACAAGGCACCCCGA TR:VR 365:4 33:0 chr17 66281318 r_467_1 G GTCGGGGTGCCTTGTG]chr17:60254250] . Too_low_VAF SVTYPE=BND;MATEID=r_467_0;SVINSLEN=15;SVINSSEQ=TCGGGGTGCCTTGTG TR:VR 365:4 33:0 chr6 104348612 r_661 A . PASS END=137401786;SVTYPE=DEL;SVLEN=-33053174 TR:VR 66:23 36:0 chr8 89886298 r_724 C . PASS END=89891065;SVTYPE=DUP;SVLEN=4767 TR:VR 30:5 21:0 chr10 74418375 r_49_0 G [chr10:79609595[C . PASS SVTYPE=BND;MATEID=r_49_1 TR:VR 131:28 29:0 chr10 79609595 r_49_1 C [chr10:74418375[C . PASS SVTYPE=BND;MATEID=r_49_0 TR:VR 131:28 29:0 chr11 71162028 r_125_0 G G]chr11:78209962] . PASS SVTYPE=BND;MATEID=r_125_1 TR:VR 136:13 32:0 chr11 78209962 r_125_1 G G]chr11:71162028] . PASS SVTYPE=BND;MATEID=r_125_0 TR:VR 136:13 32:0 chr12 24959658 r_207_0 T TGTGAACCAAATAAGGAAACCTTCATCTTTTTATGATTC[chr14:21206610[ . PASS SVTYPE=BND;MATEID=r_207_1;SVINSLEN=38;SVINSSEQ=GTGAACCAAATAAGGAAACCTTCATCTTTTTATGATTC TR:VR 50:4 26:0 chr14 21206610 r_207_1 C ]chr12:24959658]GAATCATAAAAAGATGAAGGTTTCCTTATTTGGTTCACC . PASS SVTYPE=BND;MATEID=r_207_0;SVINSLEN=38;SVINSSEQ=GAATCATAAAAAGATGAAGGTTTCCTTATTTGGTTCAC TR:VR 50:4 26:0 chr12 69212834 r_245 C . Too_low_VAF END=76565879;SVTYPE=DEL;SVLEN=-7353045 TR:VR 129:6 31:0 chr14 53919774 r_383 T . PASS END=58705046;SVTYPE=DUP;SVLEN=4785272 TR:VR 246:23 33:0 chr16 4895242 r_411 A . PASS END=4916480;SVTYPE=DEL;SVLEN=-21238 TR:VR 51:3 20:0 chr17 60259463 r_468 T . Too_low_VAF END=66277084;SVTYPE=DUP;SVLEN=6017621 TR:VR 385:8 42:0 chr2 41608558 r_527_0 G ]chr9:81711995]A . PASS SVTYPE=BND;MATEID=r_527_1 TR:VR 42:3 28:0 chr9 81711995 r_527_1 A A[chr2:41608558[ . PASS SVTYPE=BND;MATEID=r_527_0 TR:VR 42:3 28:0 chr20 63487308 i_502 C . PASS END=63487308;SVTYPE=INS;SVINSLEN=475;SVINSSEQ=ATCCTCAGGGAACCTGCCCACCCTCCACCCCCACCCTCCTCTGCATCCTCAGGAACCTGCCCACCCTCCACCCTGACCCTCCTCCGCATCCTCAGGGAACCTGCCCACCCTCCACCCCACCCCTCCTCCGCATCCTCAGGGAAGCTGCCCACCCTCCACCCCGACCCTCCTCTGCATCCTCAGGGAACCTGCCCACCCTCCACACCCGACCCTCCTCCGCATCCTCAGGGAACCTGCCCATCCCTCCACCCCACCCTCCTCCGCATCCTCAGGGAACCTGCCCACCCTCCACCCCACCCTCCTCTGCATCCTCAGGGAACCTGCCCACCCTCCACCCCACCCTCCTCTGCATCCTCAGGGAACCTGCTTCCCCACCCTCCACCCCACCCTCCTCCGCATCCTCAGGGAGCCTGCCCACACCTCCACCCTGACCCTCCTCTGCATCCTCAGGGAGCAGGATGGATAGGTACAGGCT TR:VR 29:3 14:0 chr22 38108130 r_550 G . PASS END=38318708;SVTYPE=DUP;SVLEN=210578 TR:VR 34:4 37:0 chr6 106285574 r_662_0 A [chr6:106286743[GACA . PASS SVTYPE=BND;MATEID=r_662_1;SVINSLEN=3;SVINSSEQ=GAC TR:VR 56:47 13:0 chr6 106286743 r_662_1 A [chr6:106285574[GTCA . PASS SVTYPE=BND;MATEID=r_662_0;SVINSLEN=3;SVINSSEQ=GTC TR:VR 56:47 13:0 chr8 89926451 r_725 G . PASS END=90048141;SVTYPE=DUP;SVLEN=121690 TR:VR 50:3 38:0 chrX 132606897 r_745 A . PASS END=132813851;SVTYPE=DUP;SVLEN=206954 TR:VR 47:5 36:0 chr11 71256672 r_126_0 G [chr11:71544829[G . PASS SVTYPE=BND;MATEID=r_126_1 TR:VR 139:14 32:0 chr11 71544829 r_126_1 G [chr11:71256672[G . PASS SVTYPE=BND;MATEID=r_126_0 TR:VR 139:14 32:0 chr12 113695014 r_277 A . PASS END=113715274;SVTYPE=DEL;SVLEN=-20260 TR:VR 39:3 29:0 chr14 34613719 r_332_0 G [chr17:62554749[T . PASS SVTYPE=BND;MATEID=r_332_1 TR:VR 143:48 27:0 chr17 62554749 r_332_1 T [chr14:34613719[T . PASS SVTYPE=BND;MATEID=r_332_0 TR:VR 143:48 27:0 chr14 53926502 r_384_0 T T[chr17:60569315[ . PASS SVTYPE=BND;MATEID=r_384_1 TR:VR 380:21 27:0 chr17 60569315 r_384_1 G ]chr14:53926502]G . PASS SVTYPE=BND;MATEID=r_384_0 TR:VR 380:21 27:0 chr16 49143726 r_414 A . PASS END=49205494;SVTYPE=DUP;SVLEN=61768 TR:VR 67:12 38:0 chr17 60347220 r_469 T . Too_low_VAF END=61153608;SVTYPE=DUP;SVLEN=806388 TR:VR 539:11 28:0 chr2 41608569 r_528_0 T T[chr9:81710160[ . PASS SVTYPE=BND;MATEID=r_528_1 TR:VR 43:4 28:0 chr9 81710160 r_528_1 G ]chr2:41608569]G . PASS SVTYPE=BND;MATEID=r_528_0 TR:VR 43:4 28:0 chr6 106518864 r_663 C . Too_low_VAF END=141365204;SVTYPE=DUP;SVLEN=34846340 TR:VR 111:5 44:0 chrX 137205801 r_746 G . PASS END=137307077;SVTYPE=DUP;SVLEN=101276 TR:VR 39:8 41:0 chr10 75013235 r_50_0 C C[chr14:24761186[ . PASS SVTYPE=BND;MATEID=r_50_1 TR:VR 159:9 32:0 chr14 24761186 r_50_1 T ]chr10:75013235]T . PASS SVTYPE=BND;MATEID=r_50_0 TR:VR 159:9 32:0 chr11 71291753 r_127 T . Too_low_VAF END=71420838;SVTYPE=DEL;SVLEN=-129085 TR:VR 153:5 35:0 chr14 53926717 r_385_0 A [chr17:60527904[C . PASS SVTYPE=BND;MATEID=r_385_1 TR:VR 400:24 36:0 chr17 60527904 r_385_1 C [chr14:53926717[C . PASS SVTYPE=BND;MATEID=r_385_0 TR:VR 400:24 36:0 chr15 22680909 r_405 T . PASS END=22906892;SVTYPE=DUP;SVLEN=225983 TR:VR 47:3 39:0 chr4 155713831 r_589 G . PASS END=155842033;SVTYPE=DUP;SVLEN=128202 TR:VR 49:3 40:0 chr6 107040805 r_664 G . PASS END=124812172;SVTYPE=DEL;SVLEN=-17771367 TR:VR 66:43 31:0 chrX 140667677 r_747 G . PASS END=140724395;SVTYPE=DUP;SVLEN=56718;SVINSLEN=47;SVINSSEQ=TTCAGACACATTCCATACTCACACACACACTTTCCATACACATACAC TR:VR 50:6 32:0 chr10 75053839 r_51_0 G G[chr6:137676761[ . Too_low_VAF SVTYPE=BND;MATEID=r_51_1 TR:VR 193:9 26:0 chr6 137676761 r_51_1 G ]chr10:75053839]G . Too_low_VAF SVTYPE=BND;MATEID=r_51_0 TR:VR 193:9 26:0 chr11 71335472 r_128_0 G [chr13:107433777[T . PASS SVTYPE=BND;MATEID=r_128_1 TR:VR 87:9 42:0 chr13 107433777 r_128_1 T [chr11:71335472[T . PASS SVTYPE=BND;MATEID=r_128_0 TR:VR 87:9 42:0 chr12 25671950 r_208_0 T T]chr14:50240072] . Too_low_VAF SVTYPE=BND;MATEID=r_208_1 TR:VR 357:7 24:0 chr14 50240072 r_208_1 T T]chr12:25671950] . Too_low_VAF SVTYPE=BND;MATEID=r_208_0 TR:VR 357:7 24:0 chr13 34233002 d_287 C . Too_small_size END=34233045;SVTYPE=DEL;SVLEN=-43 TR:VR 10:4 20:0 chr14 34769856 r_333 A . PASS END=34816607;SVTYPE=DUP;SVLEN=46751 TR:VR 98:6 31:0 chr14 53940760 r_386_0 T T]chr17:64085379] . PASS SVTYPE=BND;MATEID=r_386_1 TR:VR 292:29 31:0 chr17 64085379 r_386_1 G G]chr14:53940760] . PASS SVTYPE=BND;MATEID=r_386_0 TR:VR 292:29 31:0 chr17_GL000205v2_random 44640 r_495 G . Too_low_VAF END=85985;SVTYPE=DUP;SVLEN=41345 TR:VR 181:7 156:0 chr2 118844988 r_530 T . PASS END=118967024;SVTYPE=DUP;SVLEN=122036 TR:VR 58:9 34:0 chr20 28882868 d_628 A . PASS END=28882969;SVTYPE=INS;SVINSLEN=290;SVINSSEQ=GAGAAGTTTCAAACATTGCTTCTGTCAAGATTTTATTTGAATATATTTCCTTTTCTACCGTAGGCCGCAAAGTGCTCCAAATGTCCACTGGGAGATTTTACAAAAGAGTGTCTCCAAACTGCTCAATCAAAAGAAAGGTTCAAATCAAAAGAAAGGTTCAACTCTGTGAGATGAACGCATGCTTCACAAAGAAGTTACTCAGAATTCTTCTGTCTAGTTTTCATGTGAAGATATTTCGCTTTTCCACCATAGGCCTCAAAGGGATCTTAATCTCCCCTTGCAGGTTCTAC TR:VR 47:4 35:0 chr5 45217344 r_599 T . PASS END=45517079;SVTYPE=DUP;SVLEN=299735;SVINSLEN=14;SVINSSEQ=AATCAGCTTGTCTG TR:VR 52:8 41:0 chr6 107564584 r_665 G . PASS END=139594857;SVTYPE=DUP;SVLEN=32030273;SVINSLEN=3;SVINSSEQ=TAA TR:VR 90:27 33:0 chr6 169988355 i_708 C . PASS END=169988356;SVTYPE=INS;SVINSLEN=378;SVINSSEQ=CGGGGGGACAGTGGCCGCCATGTCCACAGCGACAGGATGGGTCCGAGGGGACAGCGGCCGCCACTGTCCATGTCGACAGGGTGGGGTCCGAGGGGACAGCGGCCGCCATGTCCAGCGACAGGATGGGTCCGAGGGGACAGCGGCCGCCATGTCCAGCGACAGGGTGGGTCCGAGGGGGACAGCGGCCGCCATGTCCAGCGACAGGTGGGTCTGAGGGGACAGTGGCCGTGATGTCCAGCGACAGGGTGGGTCTGAGGGGACAGTGGCCGTGATGTCCAGCGACAGGGTGGGTCTGAGGGGGACAGTGGCCGTGATGTCCAGCGACAGGATGGGTCCGGGGGGACAGTGGCCGCCATGTCCAGCGACAGGATGGGTCCG TR:VR 21:4 12:0 chr8 118987226 r_726 A . PASS END=119254421;SVTYPE=DUP;SVLEN=267195 TR:VR 86:8 31:0 chr9 109355968 r_734 C . PASS END=109443735;SVTYPE=DUP;SVLEN=87767 TR:VR 46:5 36:0 chr1 19758775 r_0 G . PASS END=19894927;SVTYPE=DUP;SVLEN=136152 TR:VR 49:6 28:0 chr10 27274894 r_22 A . PASS END=84005259;SVTYPE=DUP;SVLEN=56730365 TR:VR 58:8 30:0 chr10 75232921 r_52 G . PASS END=80790471;SVTYPE=DEL;SVLEN=-5557550 TR:VR 127:32 26:0 chr11 71475174 r_129_0 T [chr11:71480221[T . PASS SVTYPE=BND;MATEID=r_129_1 TR:VR 98:13 14:0 chr11 71480221 r_129_1 T [chr11:71475174[T . PASS SVTYPE=BND;MATEID=r_129_0 TR:VR 98:13 14:0 chr12 116545531 d_267 T . PASS END=116545605;SVTYPE=DEL;SVLEN=-74 TR:VR 40:9 19:0 chr12 25730415 r_209_0 C C[chr17:60049022[ . Too_low_VAF SVTYPE=BND;MATEID=r_209_1 TR:VR 520:7 40:0 chr17 60049022 r_209_1 T ]chr12:25730415]T . Too_low_VAF SVTYPE=BND;MATEID=r_209_0 TR:VR 520:7 40:0 chr12 69229123 d_261 A . Too_low_VAF;Too_small_size END=69229042;SVTYPE=INS;SVINSLEN=19;SVINSSEQ=TATATACATATATTATATA TR:VR 130:5 10:0 chr14 35189717 r_334 T . PASS END=35322375;SVTYPE=DEL;SVLEN=-132658 TR:VR 90:6 25:0 chr14 54123389 r_387_0 T T[chr17:60750518[ . PASS SVTYPE=BND;MATEID=r_387_1 TR:VR 285:78 34:0 chr17 60750518 r_387_1 A ]chr14:54123389]A . PASS SVTYPE=BND;MATEID=r_387_0 TR:VR 285:78 34:0 chr16 51362554 r_415 G . PASS END=51431111;SVTYPE=DUP;SVLEN=68557 TR:VR 56:7 39:0 chr17 28951828 r_423 A . PASS END=29100095;SVTYPE=DUP;SVLEN=148267 TR:VR 66:14 28:0 chr4 172998390 r_590 T . PASS END=173118988;SVTYPE=DUP;SVLEN=120598;SVINSLEN=1;SVINSSEQ=A TR:VR 57:6 43:0 chr6 107675550 r_666 C . PASS END=138200395;SVTYPE=DEL;SVLEN=-30524845 TR:VR 100:5 45:0 chr10 27274928 r_23_0 T T]chr10:27275145] . PASS SVTYPE=BND;MATEID=r_23_1 TR:VR 37:8 11:0 chr10 27275145 r_23_1 A A]chr10:27274928] . PASS SVTYPE=BND;MATEID=r_23_0 TR:VR 37:8 11:0 chr10 75236725 r_53_0 T ]chr6:133124156]A . PASS SVTYPE=BND;MATEID=r_53_1 TR:VR 159:30 30:0 chr6 133124156 r_53_1 A A[chr10:75236725[ . PASS SVTYPE=BND;MATEID=r_53_0 TR:VR 159:30 30:0 chr11 71475500 r_130_0 G GC[chr14:53904274[ . PASS SVTYPE=BND;MATEID=r_130_1;SVINSLEN=1;SVINSSEQ=C TR:VR 208:13 29:0 chr14 53904274 r_130_1 A ]chr11:71475500]GA . PASS SVTYPE=BND;MATEID=r_130_0;SVINSLEN=1;SVINSSEQ=G TR:VR 208:13 29:0 chr12 11794548 r_201 A . PASS END=12019106;SVTYPE=DUP;SVLEN=224558 TR:VR 59:9 18:0 chr12 25734328 r_210_0 T T[chr14:49626409[ . Too_low_VAF SVTYPE=BND;MATEID=r_210_1 TR:VR 366:4 43:0 chr14 49626409 r_210_1 A ]chr12:25734328]A . Too_low_VAF SVTYPE=BND;MATEID=r_210_0 TR:VR 366:4 43:0 chr14 36087985 r_335_0 T ]chr17:61915194]C . Too_low_VAF SVTYPE=BND;MATEID=r_335_1 TR:VR 352:5 31:0 chr17 61915194 r_335_1 C C[chr14:36087985[ . Too_low_VAF SVTYPE=BND;MATEID=r_335_0 TR:VR 352:5 31:0 chr14 54971430 d_312 A . PASS END=54971498;SVTYPE=DEL;SVLEN=-68 TR:VR 36:8 20:0 chr16 5220146 r_412 C . PASS END=5363153;SVTYPE=DUP;SVLEN=143007 TR:VR 68:9 32:0 chr17 295358 i_288 G . Too_small_size END=295358;SVTYPE=INS;SVINSLEN=31;SVINSSEQ=CAGAGGAAATGCACATCAGTGTGGGAGGGAC TR:VR 30:6 9:0 chr17 60632364 r_470_0 A A]chr17:60632814] . Too_low_VAF SVTYPE=BND;MATEID=r_470_1 TR:VR 274:8 14:0 chr17 60632814 r_470_1 A A]chr17:60632364] . Too_low_VAF SVTYPE=BND;MATEID=r_470_0 TR:VR 274:8 14:0 chr19 23733409 d_534 T . PASS END=23733659;SVTYPE=DEL;SVLEN=-250 TR:VR 28:3 10:0 chr4 173006450 r_591 T . PASS END=173172975;SVTYPE=DUP;SVLEN=166525 TR:VR 72:6 38:0 chr6 107675670 r_667 A . PASS END=137515621;SVTYPE=DUP;SVLEN=29839951 TR:VR 103:6 44:0 chr7 153507797 r_715 T . PASS END=153597481;SVTYPE=DUP;SVLEN=89684;SVINSLEN=2;SVINSSEQ=TG TR:VR 51:3 42:0 chr8 132669469 r_727 A . PASS END=132782471;SVTYPE=DUP;SVLEN=113002 TR:VR 54:7 30:0 chr9 118803633 d_879 A . Too_small_size END=118803677;SVTYPE=DEL;SVLEN=-44 TR:VR 32:3 25:0 chr10 75240363 r_54_0 A A]chr10:78036097] . PASS SVTYPE=BND;MATEID=r_54_1 TR:VR 151:22 33:0 chr10 78036097 r_54_1 T T]chr10:75240363] . PASS SVTYPE=BND;MATEID=r_54_0 TR:VR 151:22 33:0 chr11 30493623 r_88 T . PASS END=30592069;SVTYPE=DUP;SVLEN=98446 TR:VR 50:7 28:0 chr11 71478263 r_131_0 T [chr11:71484591[G . PASS SVTYPE=BND;MATEID=r_131_1 TR:VR 92:13 15:0 chr11 71484591 r_131_1 G [chr11:71478263[G . PASS SVTYPE=BND;MATEID=r_131_0 TR:VR 92:13 15:0 chr12 25750832 r_211_0 G ]chr17:60656440]A . Too_low_VAF SVTYPE=BND;MATEID=r_211_1 TR:VR 505:6 33:0 chr17 60656440 r_211_1 A A[chr12:25750832[ . Too_low_VAF SVTYPE=BND;MATEID=r_211_0 TR:VR 505:6 33:0 chr14 36353851 r_336_0 T [chr14:50279039[C . Too_low_VAF SVTYPE=BND;MATEID=r_336_1 TR:VR 167:8 37:0 chr14 50279039 r_336_1 C [chr14:36353851[C . Too_low_VAF SVTYPE=BND;MATEID=r_336_0 TR:VR 167:8 37:0 chr14 55006463 r_388_0 C C]chr14:55007108] . PASS SVTYPE=BND;MATEID=r_388_1 TR:VR 33:6 24:0 chr14 55007108 r_388_1 A A]chr14:55006463] . PASS SVTYPE=BND;MATEID=r_388_0 TR:VR 33:6 24:0 chr17 60659530 r_471_0 T T]chr17:60661148] . PASS SVTYPE=BND;MATEID=r_471_1 TR:VR 306:47 13:0 chr17 60661148 r_471_1 G G]chr17:60659530] . PASS SVTYPE=BND;MATEID=r_471_0 TR:VR 306:47 13:0 chr20 8599796 r_539 T . PASS END=8675258;SVTYPE=DUP;SVLEN=75462;SVINSLEN=1;SVINSSEQ=A TR:VR 76:4 28:0 chr6 107675939 r_668 C . Too_low_VAF END=139241812;SVTYPE=DEL;SVLEN=-31565873 TR:VR 164:7 36:0 chr7 154073559 d_847 C . PASS END=154084798;SVTYPE=DEL;SVLEN=-11239 TR:VR 25:4 17:0 chr9 121523419 r_735 G . PASS END=121590395;SVTYPE=DUP;SVLEN=66976 TR:VR 66:12 19:0 chr10 27816608 r_24_0 A A]chr10:47132058] . PASS SVTYPE=BND;MATEID=r_24_1 TR:VR 37:3 33:0 chr10 47132058 r_24_1 T T]chr10:27816608] . PASS SVTYPE=BND;MATEID=r_24_0 TR:VR 37:3 33:0 chr10 75406647 r_55_0 C C]chr10:77380812] . PASS SVTYPE=BND;MATEID=r_55_1 TR:VR 147:38 29:0 chr10 77380812 r_55_1 A A]chr10:75406647] . PASS SVTYPE=BND;MATEID=r_55_0 TR:VR 147:38 29:0 chr11 71478494 r_132_0 G G]chr11:71480753] . PASS SVTYPE=BND;MATEID=r_132_1 TR:VR 87:13 11:0 chr11 71480753 r_132_1 A A]chr11:71478494] . PASS SVTYPE=BND;MATEID=r_132_0 TR:VR 87:13 11:0 chr12 25784800 r_212_0 A A[chr17:63778883[ . PASS SVTYPE=BND;MATEID=r_212_1 TR:VR 360:216 38:0 chr17 63778883 r_212_1 T ]chr12:25784800]T . PASS SVTYPE=BND;MATEID=r_212_0 TR:VR 360:216 38:0 chr12 69254306 r_246 T . PASS END=70512297;SVTYPE=DEL;SVLEN=-1257991 TR:VR 161:16 35:0 chr14 36395829 r_337_0 G G]chr14:49725815] . Too_low_VAF SVTYPE=BND;MATEID=r_337_1 TR:VR 181:9 24:0 chr14 49725815 r_337_1 A A]chr14:36395829] . Too_low_VAF SVTYPE=BND;MATEID=r_337_0 TR:VR 181:9 24:0 chr14 55006505 r_389_0 T [chr14:55007094[A . PASS SVTYPE=BND;MATEID=r_389_1 TR:VR 33:6 24:0 chr14 55007094 r_389_1 A [chr14:55006505[A . PASS SVTYPE=BND;MATEID=r_389_0 TR:VR 33:6 24:0 chr17 60710465 r_472 T . Too_low_VAF END=63828362;SVTYPE=DUP;SVLEN=3117897 TR:VR 496:6 30:0 chr22 46085000 r_551 C . PASS END=46669464;SVTYPE=DUP;SVLEN=584464 TR:VR 36:3 27:0 chr6 108642129 r_669 A . PASS END=108677704;SVTYPE=DUP;SVLEN=35575 TR:VR 21:5 23:0 chr8 138343013 d_870 T . PASS END=138351939;SVTYPE=DEL;SVLEN=-8926 TR:VR 38:5 22:0 chr1 217829955 d_166 G . Too_small_size END=217829997;SVTYPE=DEL;SVLEN=-42 TR:VR 32:12 19:0 chr10 75409173 r_56_0 C C]chr6:94591093] . PASS SVTYPE=BND;MATEID=r_56_1 TR:VR 45:7 35:0 chr6 94591093 r_56_1 T T]chr10:75409173] . PASS SVTYPE=BND;MATEID=r_56_0 TR:VR 45:7 35:0 chr11 71478683 r_133_0 G [chr17:61162687[T . Too_low_VAF SVTYPE=BND;MATEID=r_133_1 TR:VR 309:4 24:0 chr17 61162687 r_133_1 T [chr11:71478683[T . Too_low_VAF SVTYPE=BND;MATEID=r_133_0 TR:VR 309:4 24:0 chr12 69272940 r_247 T . PASS END=72609058;SVTYPE=DEL;SVLEN=-3336118 TR:VR 170:11 34:0 chr14 37544801 r_338 G . PASS END=37741715;SVTYPE=DUP;SVLEN=196914 TR:VR 124:11 30:0 chr14 55018189 r_390 T . PASS END=58848823;SVTYPE=DEL;SVLEN=-3830634 TR:VR 107:6 33:0 chr17 60739787 r_473_0 C C]chr17:61451457] . PASS SVTYPE=BND;MATEID=r_473_1 TR:VR 395:77 31:0 chr17 61451457 r_473_1 C C]chr17:60739787] . PASS SVTYPE=BND;MATEID=r_473_0 TR:VR 395:77 31:0 chr6 26169450 r_618 C . PASS END=26436222;SVTYPE=DUP;SVLEN=266772 TR:VR 46:5 31:0 chr1 222440017 r_17 G . PASS END=222549392;SVTYPE=DUP;SVLEN=109375 TR:VR 70:9 32:0 chr10 30584082 r_26 G . PASS END=31303363;SVTYPE=DUP;SVLEN=719281 TR:VR 39:4 25:0 chr10 75415137 r_57_0 C [chr10:75497397[G . PASS SVTYPE=BND;MATEID=r_57_1 TR:VR 81:12 32:0 chr10 75497397 r_57_1 G [chr10:75415137[G . PASS SVTYPE=BND;MATEID=r_57_0 TR:VR 81:12 32:0 chr11 71478951 r_134_0 G GATTAAGCAAATAAATAGAATTCATAGTTAAAAGCCTTCTAAAAAATTCTCCACCCAGATGTGTTCATTAACAAATATTACCAAACATTTAAAGAAGAAATAACATAAATTTTACAAGATCTCTTCTAAAAAATAGAAGATGTAATCCTTCTCAATTTATTTTATGAGG]chr17:61704681] . Too_low_VAF SVTYPE=BND;MATEID=r_134_1;SVINSLEN=168;SVINSSEQ=ATTAAGCAAATAAATAGAATTCATAGTTAAAAGCCTTCTAAAAAATTCTCCACCCAGATGTGTTCATTAACAAATATTACCAAACATTTAAAGAAGAAATAACATAAATTTTACAAGATCTCTTCTAAAAAATAGAAGATGTAATCCTTCTCAATTTATTTTATGAGG TR:VR 275:3 29:0 chr17 61704681 r_134_1 G GCCTCATAAAATAAATTGAGAAGGATTACATCTTCTATTTTTTAGAAGAGATCTTGTAAAATTTATGTTATTTCTTCTTTAAATGTTTGGTAATATTTGTTAATGAACACATCTGGGTGGAGAATTTTTTAGAAGGCTTTTAACTATGAATTCTATTTATTTGCTTAAT]chr11:71478951] . Too_low_VAF SVTYPE=BND;MATEID=r_134_0;SVINSLEN=168;SVINSSEQ=CCTCATAAAATAAATTGAGAAGGATTACATCTTCTATTTTTTAGAAGAGATCTTGTAAAATTTATGTTATTTCTTCTTTAAATGTTTGGTAATATTTGTTAATGAACACATCTGGGTGGAGAATTTTTTAGAAGGCTTTTAACTATGAATTCTATTTATTTGCTTAAT TR:VR 275:3 29:0 chr12 27134985 r_214 A . PASS END=27294881;SVTYPE=DUP;SVLEN=159896 TR:VR 92:6 25:0 chr12 69667908 r_248 A . PASS END=70269490;SVTYPE=DEL;SVLEN=-601582 TR:VR 147:10 30:0 chr13 70123323 r_291 A . PASS END=70720770;SVTYPE=DUP;SVLEN=597447 TR:VR 32:8 38:0 chr14 55044823 r_391_0 G ]chr17:57736254]A . Too_low_VAF SVTYPE=BND;MATEID=r_391_1 TR:VR 164:8 28:0 chr17 57736254 r_391_1 A A[chr14:55044823[ . Too_low_VAF SVTYPE=BND;MATEID=r_391_0 TR:VR 164:8 28:0 chr17 61172530 r_474 G . Too_low_VAF END=61315595;SVTYPE=DUP;SVLEN=143065 TR:VR 457:11 36:0 chr20 29844514 i_459 A . PASS END=29844514;SVTYPE=INS;SVINSLEN=502;SVINSSEQ=CTTCTTTGTGATGCGTGCATTCATCTCACAGAGTTGAAATTTTTTTTGCATTGAGCAATTTTGAAACACTCTTTTTGTAGAATCTGCAAGTGGATAATTGGAAACCTTTGAGAGCTAACGTGGAAAAGGAAATATCTTCACAAAGAAACCACTCAGAAGCATTCTGTGAAAGTACTTTGTGATGTGTGCATTCAACTCTCAGATTTGAACCTATCTTTTCATTGAGCACTTTAGAATCTCTCTTTTTGTAGAATCTGCAAGTGGATAACTGGAGTCCTTTCTGCCCTTTGGTGGAGAAAGGAATATCTTCAAATAAAAACTGTATAGAAGCATTCTCAGTAACTTCTTCGTAATGTGAGCATTGAACTCACAGAGTTCAACCTTTCTTTTTATTGAGATGGTTTGAGTCTCTCTTTTTGAAGAATCGGCAAGTGGATATTTGAATCGCAGTGAGGCCTACTTTGGAAAATCAAATATGTTCACATAAAAACTACACAGAATC TR:VR 50:8 31:0 chr6 118522525 i_691 T . PASS END=118522525;SVTYPE=INS;SVINSLEN=1100;SVINSSEQ=ATTGCATGTCAAAAAACCAGTTTCTGGATTGTGTTACTTTTATCACGATGAAAAATGCCATTAGATTTGTCATTGGAAATTAAGTAATGAAATGATTTGACATGTGAAAGAAAATTTTTAAAACAGAAGTTTTTCTTCCAGTTGTCACAACTCATTTAGGTACCAATTGTCTGCAATTACAAATACCTGAATCGAAATGTCAGCAAATGGCTGTCTTTGGTGGGGAAAATATCTCTGAGGTGAATTTAAATATTAACTGCCAGAAAAATGCCATGTTTTTTTCTTTCATAAGTATTAAACAAATGCACAGACATTGAAGAACTTGGCAGAATTAAAGACCCAAATTCAAAGCATTCTCAAGAACATTCTAAGTCTGATGCTATTCCGAAAGTTTGTTCATTTACCCAAGTATTGCATCACCTGTTCTCCACAAATCTTCCCTACACACTTCTTGAGACACTTGCAATATTTTTGAAAGAATAGAAAAGTTAGAAAAGGAATAATCACTTGTTTGCATTGCTCTGTCTTTGTCAGTATGTCATAGTCTTTATATGTCACAAACAGGCTATTATGTACTTTAATTATCATTTTCTTTTCTTTTTGGAGTAGTTTTTATAGAAGAAAACTACTGAAGTGTTTGAGAATCGTCCTGATAACTCTTAATAAATTATTTTTTAACTTGTGGGTTACAGAGATACCCACAGGATGGACTTTTGAGACTGGTGTACTTGAATTTATTATAATTTTTGTTTAAAACTACAGCTTTATTAAATAAGGATATGGAGATTATTACATACATATGCAAAAAAGATAAACATTCATAAGCCACTTAAAAACAATAAAATTGAAAAAATATGAGATTGCATAATAGAAACAGATTAAGCTAGTTTAAAACTTTTATTATTTTACAATATAAAATAGTTGAATACTTAGACAAAAGTAGTTTGCTGCTATTTTCAAGTGCTCCAAAATGCAAAAATATGTATGGCATTGTTGCATTTGATCATGTTTTGTGGGACTTGTTTTTGGTTGTGGTGTATGAATTAAAAATTCACATTTGGTAGAACAAAAACAATAATCGAGGTGAAGATATGGATAAT TR:VR 21:13 17:0 chr6 27118550 r_619 T . PASS END=27149660;SVTYPE=DUP;SVLEN=31110 TR:VR 45:3 27:0 chr7 155328563 i_741 T . PASS END=155328563;SVTYPE=INS;SVINSLEN=1781;SVINSSEQ=CATCTCTCTCCCTCTCCCCAAAGACACCCACATCCTCATCTCTCCCTCCCCAAAGACACCCACATCCTCATCTCTCCCTCTCCCCCAAAGACAACCACATCCTCATCTCTCCCTCTCCCCAAAGACACTCACATCCTCATCTCTCCCTCTCCCCAAAGACACCCACATCCTCATCTCTCCCTCTCCCCAGACAGACACCCACATCCTCATCTCTCCCTCTCCCCAAAGACACCCACATCCTCATCTCTCCTCCCCGAGAACACCCACATCCTCATCTCTCCCTCTCCCCAAAGACACCCACATCCTCATCTCTCCCTCTCCCCAAAGACATTCACATCCTCATCTCTCCCTCCCCCAGAGACACCCACATCCTCATCTCTCCCTCTCCCCCAAAGACACCCCATCCTCATCTCTCCCTCCCCAAAGACATTCACATCCTCATCTCTCCCTCCCCCAGAGACAACCACATCCTCATCTCTCCCTCTCCCCAAAGACACACACATCCTCATCTCTCCCTCCCCCAGAGACACCCACATCCTCATCTCTCCCTCTCCCCAAAGACACTCACATCCTCATCTCTCCCTCCCCAAAGACACCCACATCCTCATCTCTCCCTCCCCAGAGACAACCACATCCTCATCTCTCCCCTCTCCCCAAAGACACACACATCCTCATCTCTCCCTCCCCCCAGAAACACCCAAATCCTCATCTCTCCCCTCTCCCCAAAGACACTCACATCCTCATCTCTCCCTCCCCAAAGACACTCACATCCTCATCTCTCCCTCTCCCCAAAGACACCCACATCCTCATCTCTCCTCCCCCAAAGACACCCACATCCCTCATCTCTCCCTCCCCAAAGACACCCACATCCTCATCTCTCCCTCCCCAAAGACATTCACATCCTCATCTCTCCCTCTCCCCAGAGACAAACCACATCTCCATCTCTCCCTCTCCCCAAAGACACACACATCCTCATCTCTCCCTCCCCAGAGACACACCCACATCCTCATCCCTCCCTCTCCCCAAAGACACTCACATCCTCATCTCTCCCTCCCCAAAGACACCCACATCCTCATCTCTCCCTCCCCCAAAGACATTCACGTCCTCATCTCTCCCTCCCCCAGAGACAACCACATCCTCATCTCTCCCTCTCCCCAAAGACACACACATCCTCATCTCTCCCTCCCCCCAGAGACACCCACATCCTCATTCTCTCCCTCTCCCCAAAGACACTCACATCCTCATCTCTCCCTCCCCAAAGACACTCACCATCCTCATCTCTCCCTCTCCCCAAAAGACACCCTCATCCTCATCTCTCCCCTCCCAAAGACACCCACATCCTCATCTCTCCTCTCCTCAAAGACACCCACATCCTCATATCTCCCCTCCTCAAAGACATTCACATCCTCATCTCTCCCTCCCCCAGAGACAACCACATCCTCATCCCTCCCTCTCCCCAAAGACATCTACATCCCCACCTCTCCCTGCCCCCAGAGACACCCACATCCTTACTTCTCCCTCCCCAAAAGACACCCACATCCCCTCCATCTCTCCCTCTCCCCAGAGACACCCACATCATCTCTCCCTCTCCCCAGAGACACTCACATCTCCAGCATCTCTCCCTCCCCAAAGACACCCACATCCTCATCTCTCCCTCTCCCCAAAGACACCCACATTCTCTACTCTCCCTCCCCAAAGACACTCCACATCCCTCATCTCTCCCTCCCCAAAGACTACCTACATCCTCATCTCTCCCTCTCCCCAAAGACACCCACATCCCC TR:VR 34:10 10:0 chrUn_KI270442v1 208479 d_907 T . Too_low_VAF END=208589;SVTYPE=DEL;SVLEN=-110;SVINSLEN=108;SVINSSEQ=TTCCTGTCTACTATAGGCCTAAAATGCTGCAAATATCCATCTTCAGATTCTACAAAAAGACTGTTTCCAAACTTCTCAATCAAAAGAAAAGTTCAACTCTGTGAGATG TR:VR 96:3 70:1 chr10 32413467 r_27_0 C ]chr11:71475358]G . PASS SVTYPE=BND;MATEID=r_27_1 TR:VR 96:5 31:0 chr11 71475358 r_27_1 G G[chr10:32413467[ . PASS SVTYPE=BND;MATEID=r_27_0 TR:VR 96:5 31:0 chr10 75416664 r_58_0 C [chr6:97043262[G . PASS SVTYPE=BND;MATEID=r_58_1 TR:VR 93:14 26:0 chr6 97043262 r_58_1 G [chr10:75416664[G . PASS SVTYPE=BND;MATEID=r_58_0 TR:VR 93:14 26:0 chr11 3515458 r_86 C . PASS END=3686909;SVTYPE=DUP;SVLEN=171451 TR:VR 63:10 35:0 chr11 71480058 r_135_0 A A]chr11:73534839] . Too_low_VAF SVTYPE=BND;MATEID=r_135_1 TR:VR 138:4 24:0 chr11 73534839 r_135_1 G G]chr11:71480058] . Too_low_VAF SVTYPE=BND;MATEID=r_135_0 TR:VR 138:4 24:0 chr12 28975294 r_215 T . PASS END=29117870;SVTYPE=DUP;SVLEN=142576 TR:VR 69:5 24:0 chr12 69861650 r_249_0 C C]chr12:71905341] . PASS SVTYPE=BND;MATEID=r_249_1 TR:VR 139:17 35:0 chr12 71905341 r_249_1 T T]chr12:69861650] . PASS SVTYPE=BND;MATEID=r_249_0 TR:VR 139:17 35:0 chr13 93008922 r_292 G . PASS END=93110781;SVTYPE=DUP;SVLEN=101859 TR:VR 42:8 25:0 chr14 58421191 r_392_0 G [chr14:59124952[C . PASS SVTYPE=BND;MATEID=r_392_1 TR:VR 169:42 35:0 chr14 59124952 r_392_1 C [chr14:58421191[C . PASS SVTYPE=BND;MATEID=r_392_0 TR:VR 169:42 35:0 chr6 118524330 r_671_0 G [chr6:123670566[T . PASS SVTYPE=BND;MATEID=r_671_1 TR:VR 31:13 32:0 chr6 123670566 r_671_1 T [chr6:118524330[T . PASS SVTYPE=BND;MATEID=r_671_0 TR:VR 31:13 32:0 chr8 141874366 i_795 T . PASS END=141874366;SVTYPE=INS;SVINSLEN=397;SVINSSEQ=GTATGATGGGCACAGTGTGTAGGTGAGGGTGATGGGAACTGTGTGTAGGGGAGGGTGGTGATGGGCACGGTGTATAGGTGAGGGTGATGGGAACTGTGTGTAGGGGAGGGAGGTGATGGGCACAGTGTGTAGCTGAGAGTGATGGGCACAGTGTGTAGGTGAGGGTGATGGGAACTGTGTGTGTAGGGGGAGGGTGGTGACGGGCACGGTGTATAGGTGAGGGTGATGGGAACTGTGTGTAGGGGAGGGAGGTGATGGGCACAGTGGGCACAGTGTGTAGCTGAGAGTGATAAACAGTGTGTAGGGTGAGGGTGATGGGAACTGTAGGTGAGGGGGAGGGCCCAGGTGATGGGGTGTATAGGTGAGGGTGATGGGAACTGTGTGTAGGGGACGGCAG TR:VR 31:3 15:0 chr9 132230012 r_736_0 T [chr9:132232164[T . PASS SVTYPE=BND;MATEID=r_736_1 TR:VR 32:8 13:0 chr9 132232164 r_736_1 T [chr9:132230012[T . PASS SVTYPE=BND;MATEID=r_736_0 TR:VR 32:8 13:0 chr10 75425200 r_59_0 T T]chr10:75425607] . PASS SVTYPE=BND;MATEID=r_59_1 TR:VR 58:10 17:0 chr10 75425607 r_59_1 T T]chr10:75425200] . PASS SVTYPE=BND;MATEID=r_59_0 TR:VR 58:10 17:0 chr12 69979220 r_250 A . PASS END=70708988;SVTYPE=DEL;SVLEN=-729768 TR:VR 101:36 34:0 chr14 58639894 r_393 C . PASS END=58645536;SVTYPE=DEL;SVLEN=-5642 TR:VR 106:26 15:0 chr16 68002551 d_450 C . PASS END=68002610;SVTYPE=DEL;SVLEN=-59 TR:VR 29:6 16:0 chr17 31386765 r_424 A . PASS END=52367601;SVTYPE=DUP;SVLEN=20980836 TR:VR 61:13 39:0 chr17 61449624 r_475_0 T TA]chr17:61740668] . Too_low_VAF SVTYPE=BND;MATEID=r_475_1;SVINSLEN=1;SVINSSEQ=A TR:VR 446:7 27:0 chr17 61740668 r_475_1 A AT]chr17:61449624] . Too_low_VAF SVTYPE=BND;MATEID=r_475_0;SVINSLEN=1;SVINSSEQ=T TR:VR 446:7 27:0 chr22 49659410 r_552 A . PASS END=49807547;SVTYPE=DUP;SVLEN=148137 TR:VR 29:8 43:0 chr6 31323198 r_621 T . PASS END=31328710;SVTYPE=DEL;SVLEN=-5512 TR:VR 34:9 16:0 chr8 143167287 i_796 G . PASS END=143167287;SVTYPE=INS;SVINSLEN=340;SVINSSEQ=TGGAGAGGGGAAGGAAGGTCATCTAGGGAGGACGTGGGGAGGGGAAGGAAGGTCGTCTAGGGGAGGAAGTGGAGAGGGAAGGAAGGTCGTCTAGGGAGGAAGTGGAGAGGGAAGGAAGGTCATCTAGGGAGGAAGTGGAGAGGGGAAGGAAAGGTCATCTAGGGAGGACTTGGGGAGGGGAAGGAAGGTCGTCTAGGGAGGAAGTGGAGAGGGGAAGGACAACGTCTAGGGAGGAAGTGGAGAGGGGAAGGAAGGTCATCTAGGGAGGACGTGGGGAGGGGAAGGAAGGTCATCTAGGGAGGACGTGGAGAGGGGAAGGAAGGTCATCTAGGGAGGACAT TR:VR 21:4 15:0 chrUn_KI270442v1 209406 d_909 A . PASS END=209687;SVTYPE=DEL;SVLEN=-281;SVINSLEN=110;SVINSSEQ=AACTGCTCTATCAAAAGAAAAGTTCAACACTGTGAGATGCATGCACATATCACAAAGAAGTTTCTCAGAAAGCTTCTGTTTTGCTTTCATGTGAAGATATTTCCTTTTTC TR:VR 96:17 71:1 chr12 30319936 r_216_0 A ]chr17:65062761]T . Too_low_VAF SVTYPE=BND;MATEID=r_216_1 TR:VR 106:4 19:0 chr17 65062761 r_216_1 T T[chr12:30319936[ . Too_low_VAF SVTYPE=BND;MATEID=r_216_0 TR:VR 106:4 19:0 chr12 70530992 r_251_0 C C]chr12:72618606] . PASS SVTYPE=BND;MATEID=r_251_1 TR:VR 116:12 31:0 chr12 72618606 r_251_1 A A]chr12:70530992] . PASS SVTYPE=BND;MATEID=r_251_0 TR:VR 116:12 31:0 chr14 44818874 r_339_0 C [chr4:29403959[G . PASS SVTYPE=BND;MATEID=r_339_1 TR:VR 42:6 24:0 chr4 29403959 r_339_1 G [chr14:44818874[G . PASS SVTYPE=BND;MATEID=r_339_0 TR:VR 42:6 24:0 chr16 69776915 d_451 G . PASS END=69776988;SVTYPE=DEL;SVLEN=-73 TR:VR 26:4 18:0 chr17 61484654 r_476_0 C [chr17:61485180[T . PASS SVTYPE=BND;MATEID=r_476_1 TR:VR 187:81 17:0 chr17 61485180 r_476_1 T [chr17:61484654[T . PASS SVTYPE=BND;MATEID=r_476_0 TR:VR 187:81 17:0 chr1 226512705 d_167 G . PASS END=226512883;SVTYPE=DEL;SVLEN=-178 TR:VR 35:6 14:0 chr10 75473172 r_60_0 T T]chr10:77401370] . PASS SVTYPE=BND;MATEID=r_60_1 TR:VR 97:5 44:0 chr10 77401370 r_60_1 T T]chr10:75473172] . PASS SVTYPE=BND;MATEID=r_60_0 TR:VR 97:5 44:0 chr11 71489397 r_138_0 G G[chr14:50243386[ . PASS SVTYPE=BND;MATEID=r_138_1 TR:VR 168:14 23:0 chr14 50243386 r_138_1 T ]chr11:71489397]T . PASS SVTYPE=BND;MATEID=r_138_0 TR:VR 168:14 23:0 chr14 58653043 r_394_0 C C[chr17:63938061[ . PASS SVTYPE=BND;MATEID=r_394_1 TR:VR 269:23 39:0 chr17 63938061 r_394_1 C ]chr14:58653043]C . PASS SVTYPE=BND;MATEID=r_394_0 TR:VR 269:23 39:0 chr15 88039266 i_245 C . PASS END=88039266;SVTYPE=INS;SVINSLEN=75;SVINSSEQ=AAAAAGAAGAGAAGAAAAAAAGAAACTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA TR:VR 23:6 15:0 chr16 71541541 r_416 G . PASS END=71593010;SVTYPE=DUP;SVLEN=51469 TR:VR 58:4 37:0 chr17 61684384 r_477 A . Too_low_VAF END=61745943;SVTYPE=DUP;SVLEN=61559 TR:VR 413:8 31:0 chr2 157398475 r_532 T . PASS END=157611833;SVTYPE=DUP;SVLEN=213358 TR:VR 55:5 31:0 chr22_KI270733v1_random 136583 r_553 T . Too_low_VAF END=160101;SVTYPE=DUP;SVLEN=23518;SVINSLEN=35;SVINSSEQ=AGCCTCCGGGGTCGACCGCCTGCCGCCCGCGGGCG TR:VR 700:4 306:0 chr6 124721544 r_672 T . PASS END=124859226;SVTYPE=DUP;SVLEN=137682 TR:VR 64:4 36:0 chrX 39995210 r_739 C . PASS END=40165328;SVTYPE=DUP;SVLEN=170118 TR:VR 29:7 27:0 chr1 226513361 i_29 A . PASS END=226513393;SVTYPE=INS;SVINSLEN=209;SVINSSEQ=TAATGATGACAACAGATGTACTAAATAGAGCTGACTAACGTGCCATGCACTAAGAGTGGTTTTTGTTGTTGTTGTTTTTGGGATGGCGTCTTGCTATGTTGCCCAGGCTAGACTCGAACTCCTGGCCTGAAGCCATCCTCCTGCCTCAGCCTCCCAAGTAGCTGTGACTATAGCATGTGCCACCACACCCAGCTTGTTCTAAGTTTTTT TR:VR 34:6 13:0 chr10 75501321 r_61_0 C CCCCCTCATTTTTATTTTTATTTTATTTTATTTTATTTTGTTTA]chr10:75935980] . PASS SVTYPE=BND;MATEID=r_61_1;SVINSLEN=43;SVINSSEQ=CCCCTCATTTTTATTTTTATTTTATTTTATTTTATTTTGTTTA TR:VR 61:11 37:0 chr10 75935980 r_61_1 T TTAAACAAAATAAAATAAAATAAAATAAAAATAAAAATGAGGGG]chr10:75501321] . PASS SVTYPE=BND;MATEID=r_61_0;SVINSLEN=43;SVINSSEQ=TAAACAAAATAAAATAAAATAAAATAAAAATAAAAATGAGGGG TR:VR 61:11 37:0 chr11 71489744 r_139_0 C ]chr17:60347744]G . Too_low_VAF SVTYPE=BND;MATEID=r_139_1 TR:VR 350:9 30:0 chr17 60347744 r_139_1 G G[chr11:71489744[ . Too_low_VAF SVTYPE=BND;MATEID=r_139_0 TR:VR 350:9 30:0 chr12 31119442 d_247 C . PASS END=31119691;SVTYPE=DEL;SVLEN=-249;SVINSLEN=9;SVINSSEQ=GTCTTCCCC TR:VR 51:3 20:0 chr12 70955518 r_253_0 A [chr12:72606686[T . PASS SVTYPE=BND;MATEID=r_253_1 TR:VR 136:9 25:0 chr12 72606686 r_253_1 T [chr12:70955518[T . PASS SVTYPE=BND;MATEID=r_253_0 TR:VR 136:9 25:0 chr14 101608234 r_404_0 T TTCCACCTCCTCCTTCATCTCCTCTTCCAGACCTCCTTTACCTCCTCCTCCACCTCCTCCACCTCGGCCTCCACTTCCACCATCTCCTCCTCCCCCCCTTGTCCTCCACCTCCTCCTCCACCTCCTCCACCCTCCTCCACCTCCTCCACCTTGTCTTCCACCCCTCCTCCACCTCCTCCACCTGGTCCTCCACCTCCTCCTCCCTCTTCCACCTCCTCCAACTCTTCCC[chr15:29558694[ . PASS SVTYPE=BND;MATEID=r_404_1;SVINSLEN=228;SVINSSEQ=TCCACCTCCTCCTTCATCTCCTCTTCCAGACCTCCTTTACCTCCTCCTCCACCTCCTCCACCTCGGCCTCCACTTCCACCATCTCCTCCTCCCCCCCTTGTCCTCCACCTCCTCCTCCACCTCCTCCACCCTCCTCCACCTCCTCCACCTTGTCTTCCACCCCTCCTCCACCTCCTCCACCTGGTCCTCCACCTCCTCCTCCCTCTTCCACCTCCTCCAACTCTTCCC TR:VR 44:6 41:1 chr15 29558694 r_404_1 C ]chr14:101608234]GGGAAGAGTTGGAGGAGGTGGAAGAGGGAGGAGGAGGTGGAGGACCAGGTGGAGGAGGTGGAGGAGGGGTGGAAGACAAGGTGGAGGAGGTGGAGGAGGGTGGAGGAGGTGGAGGAGGAGGTGGAGGACAAGGGGGGGAGGAGGAGATGGTGGAAGTGGAGGCCGAGGTGGAGGAGGTGGAGGAGGAGGTAAAGGAGGTCTGGAAGAGGAGATGAAGGAGGAGGTGGAC . PASS SVTYPE=BND;MATEID=r_404_0;SVINSLEN=228;SVINSSEQ=GGGAAGAGTTGGAGGAGGTGGAAGAGGGAGGAGGAGGTGGAGGACCAGGTGGAGGAGGTGGAGGAGGGGTGGAAGACAAGGTGGAGGAGGTGGAGGAGGGTGGAGGAGGTGGAGGAGGAGGTGGAGGACAAGGGGGGGAGGAGGAGATGGTGGAAGTGGAGGCCGAGGTGGAGGAGGTGGAGGAGGAGGTAAAGGAGGTCTGGAAGAGGAGATGAAGGAGGAGGTGGA TR:VR 44:6 41:1 chr14 48048661 r_340_0 G ]chr17:59974720]T . Too_low_VAF SVTYPE=BND;MATEID=r_340_1 TR:VR 408:8 32:0 chr17 59974720 r_340_1 T T[chr14:48048661[ . Too_low_VAF SVTYPE=BND;MATEID=r_340_0 TR:VR 408:8 32:0 chr14 58686181 r_395_0 G ]chr17:60531317]A . PASS SVTYPE=BND;MATEID=r_395_1 TR:VR 342:20 29:0 chr17 60531317 r_395_1 A A[chr14:58686181[ . PASS SVTYPE=BND;MATEID=r_395_0 TR:VR 342:20 29:0 chr15 89286132 r_406 A . PASS END=89491620;SVTYPE=DUP;SVLEN=205488 TR:VR 71:8 37:0 chr17 61704547 d_488 T . Too_low_VAF END=61704835;SVTYPE=DEL;SVLEN=-288;SVINSLEN=165;SVINSSEQ=GTGTTATTTCTTCTTTAAATGTTTGGTAATATTTGCTAGTGAACACAGCTGGGTGAATTTTTTAGAAGGCTTTTAACTATTAATTCTATTTCTTTGCTAGATAGCTATGCATGTTATCTGTTTCATCTTGGCCTCATAAAATAAATTGAGAAGGATTACATCTTC TR:VR 207:9 20:0 chr2 157427973 r_533 T . PASS END=157485383;SVTYPE=DUP;SVLEN=57410;SVINSLEN=2;SVINSSEQ=TC TR:VR 59:3 28:0 chr3 196800682 r_578 A . PASS END=196914629;SVTYPE=DUP;SVLEN=113947 TR:VR 59:6 28:0 chr6 12667238 r_617 C . PASS END=12720273;SVTYPE=DUP;SVLEN=53035 TR:VR 50:6 25:0 chr11 71489974 r_140_0 G G[chr17:61704079[ . Too_low_VAF SVTYPE=BND;MATEID=r_140_1 TR:VR 260:9 33:0 chr17 61704079 r_140_1 G ]chr11:71489974]G . Too_low_VAF SVTYPE=BND;MATEID=r_140_0 TR:VR 260:9 33:0 chr12 70970940 r_254_0 C [chr12:74348840[A . PASS SVTYPE=BND;MATEID=r_254_1 TR:VR 112:14 29:0 chr12 74348840 r_254_1 A [chr12:70970940[A . PASS SVTYPE=BND;MATEID=r_254_0 TR:VR 112:14 29:0 chr14 48051000 r_341_0 G ]chr17:59983543]G . Too_low_VAF SVTYPE=BND;MATEID=r_341_1 TR:VR 397:7 31:0 chr17 59983543 r_341_1 G G[chr14:48051000[ . Too_low_VAF SVTYPE=BND;MATEID=r_341_0 TR:VR 397:7 31:0 chr14 58727772 r_396_0 G [chr17:60536032[A . PASS SVTYPE=BND;MATEID=r_396_1 TR:VR 369:21 26:0 chr17 60536032 r_396_1 A [chr14:58727772[A . PASS SVTYPE=BND;MATEID=r_396_0 TR:VR 369:21 26:0 chr15 89286428 r_407 A . PASS END=89526265;SVTYPE=DUP;SVLEN=239837 TR:VR 62:5 38:0 chr22_KI270733v1_random 175192 d_688 C . Too_low_VAF END=175241;SVTYPE=DEL;SVLEN=-49 TR:VR 339:5 97:0 chr6 127326683 r_673_0 T [chr6:127587639[A . PASS SVTYPE=BND;MATEID=r_673_1 TR:VR 120:8 29:0 chr6 127587639 r_673_1 A [chr6:127326683[A . PASS SVTYPE=BND;MATEID=r_673_0 TR:VR 120:8 29:0 chr6 39407931 r_622_0 A A[chr8:469686[ . PASS SVTYPE=BND;MATEID=r_622_1 TR:VR 32:5 43:0 chr8 469686 r_622_1 A ]chr6:39407931]A . PASS SVTYPE=BND;MATEID=r_622_0 TR:VR 32:5 43:0 chr10 75930812 r_62_0 A [chr6:98139363[T . PASS SVTYPE=BND;MATEID=r_62_1 TR:VR 41:10 27:0 chr6 98139363 r_62_1 T [chr10:75930812[T . PASS SVTYPE=BND;MATEID=r_62_0 TR:VR 41:10 27:0 chr11 71504479 r_141 A . PASS END=71544999;SVTYPE=DUP;SVLEN=40520 TR:VR 117:14 23:0 chr12 70970968 r_255_0 T T]chr12:70971143] . PASS SVTYPE=BND;MATEID=r_255_1 TR:VR 86:15 12:0 chr12 70971143 r_255_1 T T]chr12:70970968] . PASS SVTYPE=BND;MATEID=r_255_0 TR:VR 86:15 12:0 chr14 48107076 r_342_0 T TATATATT]chr17:55501404] . PASS SVTYPE=BND;MATEID=r_342_1;SVINSLEN=7;SVINSSEQ=ATATATT TR:VR 295:25 34:0 chr17 55501404 r_342_1 T TAATATAT]chr14:48107076] . PASS SVTYPE=BND;MATEID=r_342_0;SVINSLEN=7;SVINSSEQ=AATATAT TR:VR 295:25 34:0 chr14 58883116 r_397_0 C C[chr17:61952132[ . Too_low_VAF SVTYPE=BND;MATEID=r_397_1 TR:VR 369:8 30:0 chr17 61952132 r_397_1 A ]chr14:58883116]A . Too_low_VAF SVTYPE=BND;MATEID=r_397_0 TR:VR 369:8 30:0 chr15 90086244 r_408_0 A A]chr3:50320839] . PASS SVTYPE=BND;MATEID=r_408_1 TR:VR 34:5 29:0 chr3 50320839 r_408_1 T T]chr15:90086244] . PASS SVTYPE=BND;MATEID=r_408_0 TR:VR 34:5 29:0 chr17 61988399 d_489 C . PASS END=61988667;SVTYPE=DEL;SVLEN=-268 TR:VR 287:252 18:0 chr6 127511827 r_674 A . Too_low_VAF END=137524768;SVTYPE=DEL;SVLEN=-10012941 TR:VR 106:4 42:0 chr7 157711271 d_850 C . Too_small_size END=157711227;SVTYPE=INS;SVINSLEN=0;SVINSSEQ= TR:VR 32:3 11:0 chr10 39543627 d_187 T . PASS END=39543737;SVTYPE=INS;SVINSLEN=111;SVINSSEQ=AGAATCTGCAAGTGGACATTTGGAGCGCTTTGAGATCTTTAGTGAAAAAGGAAATATCTTCACATAAAAACTGGATGGAAGCATTTACAGAAACTTCTTTGTGACGAGTGC TR:VR 23:3 17:0 chr10 75940547 r_63_0 A ]chr6:74039006]T . PASS SVTYPE=BND;MATEID=r_63_1 TR:VR 52:17 34:0 chr6 74039006 r_63_1 T T[chr10:75940547[ . PASS SVTYPE=BND;MATEID=r_63_0 TR:VR 52:17 34:0 chr11 71528870 r_142_0 T T]chr11:127662187] . PASS SVTYPE=BND;MATEID=r_142_1 TR:VR 88:11 24:0 chr11 127662187 r_142_1 T T]chr11:71528870] . PASS SVTYPE=BND;MATEID=r_142_0 TR:VR 88:11 24:0 chr14 48152710 r_343 C . Too_low_VAF END=49244911;SVTYPE=DEL;SVLEN=-1092201 TR:VR 202:5 30:0 chr14 58883564 r_398_0 C ]chr17:55518599]A . Too_low_VAF SVTYPE=BND;MATEID=r_398_1 TR:VR 250:6 28:0 chr17 55518599 r_398_1 A A[chr14:58883564[ . Too_low_VAF SVTYPE=BND;MATEID=r_398_0 TR:VR 250:6 28:0 chr16 78575135 d_453 A . PASS END=78578407;SVTYPE=DEL;SVLEN=-3272 TR:VR 29:3 15:0 chr2 88157659 i_410 T . PASS END=88157659;SVTYPE=INS;SVINSLEN=325;SVINSSEQ=ATGAAATCTCCGGCCTGGCGCAGTGGCTCATGCCTGTAATCTCAGCACTTTGGGAGGCCGAGGCGGGCAGATTATGAGGTCAGGAGATCAAGCCCATCCTGGCTAATATGGTGAAACCCCATCTCTACTAAAAGTACAAAAAAATTAGCTGGGCGTGGTGGCGGGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAAGTGGGAGAATAGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCAAGATCACGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCATCTCAAAAATAAATAAATAAATAAAAGAAAAAAGAA TR:VR 22:3 12:0 chr20 30505447 r_541 G . PASS END=30630474;SVTYPE=DUP;SVLEN=125027 TR:VR 87:9 53:0 chr5 47137503 d_804 A . PASS END=47137498;SVTYPE=INS;SVINSLEN=268;SVINSSEQ=GAAACTCCTTTGTGTTGTGTGTGTTCATTTCACAGAGTTGAATCTTTCTTTTTTTTTTTTAATTTTTTTTTAATTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATCTTTCTTTTGATAGAGCAGTTTTGAAACGCTTCTTTTTGTAGAATCTGCTTGTGGATATTTGGAGCTCTTTTAGGATTTCGTTGTAAACGGGATATCTTTGCATACAATCTAGTCAAAAGGAT TR:VR 80:5 41:0 chr6 53158272 r_623 C . PASS END=53274541;SVTYPE=DUP;SVLEN=116269;SVINSLEN=3;SVINSSEQ=TTA TR:VR 45:5 27:0 chr10 75976871 r_64_0 A [chr10:75976959[A . PASS SVTYPE=BND;MATEID=r_64_1 TR:VR 48:9 18:0 chr10 75976959 r_64_1 A [chr10:75976871[A . PASS SVTYPE=BND;MATEID=r_64_0 TR:VR 48:9 18:0 chr11 48616865 r_89 T . PASS END=48660259;SVTYPE=DUP;SVLEN=43394 TR:VR 54:4 29:0 chr11 71745105 r_143 G . PASS END=73397842;SVTYPE=DEL;SVLEN=-1652737 TR:VR 91:45 19:0 chr12 34154150 r_217 T . PASS END=34238573;SVTYPE=DUP;SVLEN=84423 TR:VR 78:7 33:0 chr14 48403673 r_344_0 A A]chr17:64351146] . Too_low_VAF SVTYPE=BND;MATEID=r_344_1 TR:VR 187:7 27:0 chr17 64351146 r_344_1 G G]chr14:48403673] . Too_low_VAF SVTYPE=BND;MATEID=r_344_0 TR:VR 187:7 27:0 chr14 58902869 r_399_0 C C]chr14:58910209] . PASS SVTYPE=BND;MATEID=r_399_1 TR:VR 109:8 14:0 chr14 58910209 r_399_1 A A]chr14:58902869] . PASS SVTYPE=BND;MATEID=r_399_0 TR:VR 109:8 14:0 chr16 78922695 d_454 A . PASS END=78923552;SVTYPE=DEL;SVLEN=-857 TR:VR 26:5 17:0 chr2 88157927 i_411 C . PASS END=88157935;SVTYPE=INS;SVINSLEN=356;SVINSSEQ=TTTTTTTAAAAAATTTATTATTATTATACTTTAAGTTTTAGGGTACATGTGCACAATGTGCAGGTTTGTTACATATGTATACATGTGCCATGTTGGTTTGCTGCACCCATTAACTCGTCATTTAGCTTTAGGTATATCTCCTAAGGCTATCCCTCCCCCCTCCCCCCACCCCACAACAGTCCCGTGAAGTGTGATGTTCCCCTTCCTGTGTCCATGTGTTCTCATTGTTCAATTCCCACCTATGAGTGAGAACATGCGGTGTTCATGTCCTTTGTAGGGACATGGATGAGACTGGAAACCATCATTCTCAGCAAACTATCACAAGGACAAAAGCCTACTTTTTTGATGGGATTGTT TR:VR 22:3 13:0 chr6 128486097 r_675_0 G G]chr6:128487033] . PASS SVTYPE=BND;MATEID=r_675_1 TR:VR 34:7 19:0 chr6 128487033 r_675_1 A A]chr6:128486097] . PASS SVTYPE=BND;MATEID=r_675_0 TR:VR 34:7 19:0 chr6 53306360 d_822 G . Too_small_size END=53306366;SVTYPE=DEL;SVLEN=-6 TR:VR 52:5 37:0 chr11 48897417 r_90 C . PASS END=48972335;SVTYPE=DUP;SVLEN=74918;SVINSLEN=3;SVINSSEQ=TTT TR:VR 52:3 37:0 chr12 127697323 i_145 G . PASS END=127697323;SVTYPE=INS;SVINSLEN=839;SVINSSEQ=GTGGTGATAGTGGTGATGATGATGGTGGTGGTGATAGTGGTGATGATGATGGTAGTGGTGATAATGGAGGTGATGGTGGTGATAGTGGAGGTGATGATGATGGTGGTGGTGGTGATAGTGGTGATGATGATGGTAGTGGTGATAATGGAGGTGATGGTGGTGGTGGTGATAGTGGTGATGATGATGGTAGTGGTGATGATGGAGGTGATGATGATGGTGGTGGTGATAGTGGTGATGATGATGGTAGTGGTGATAATGGAGGTGATGGTGGTGATAGTGGAGGTGATGATGATGGTGGTGGTGGTGATAGTGGTGATGATGATGGTAGTGGTGATAATAGAGGTGATGATGGTGGTGGTGGTGGTGATAGTGGAGGTGATGATGGTGATGGTGGTGGTGATAGTGGTGATGATGATGGTGGTGGTGATAATGGAGGTGATGATGGTGGTGGTGATGATAGTGGAGGTAATGGTGGTGACAATGGAGGTGATGATCGTGGTGGTGGTGATACTGAAAGTGATGATGATGTTAGAGGTGATCACGAGGGTGATGATGATGGCGGTGGTGGTGATAGTGATGATGGTGGTGGTGATAGTGGTGATGATGATGGTAGTGGTGATAATGGAGGTGATGGTGGTGATAGTGGAGGTGATGATGATGGTGGTGGTGGTGATAGTGGTGATGATGATGGTAGTGGTGATAATGGAGGTGATGATGGTGGTGGTGGTGATAGTGGTGATGATGGCAGTGGTGATAGTGGAGGTGATGATGGTGGTGGTGGTGGTGATACTGATGATGATGATATTAGAGGTGATCATGCAGGTAATGATGGTGAATAG TR:VR 50:5 21:0 chr12 34293082 d_249 A . PASS END=34293253;SVTYPE=DEL;SVLEN=-171 TR:VR 44:3 16:0 chr12 72061643 r_256 G . PASS END=77097923;SVTYPE=DEL;SVLEN=-5036280 TR:VR 83:7 31:0 chr14 48470252 r_345_0 G [chr6:93009372[A . PASS SVTYPE=BND;MATEID=r_345_1 TR:VR 123:44 35:0 chr6 93009372 r_345_1 A [chr14:48470252[A . PASS SVTYPE=BND;MATEID=r_345_0 TR:VR 123:44 35:0 chr14 58902968 r_400_0 G [chr9:36252377[T . Too_low_VAF SVTYPE=BND;MATEID=r_400_1 TR:VR 108:4 24:0 chr9 36252377 r_400_1 T [chr14:58902968[T . Too_low_VAF SVTYPE=BND;MATEID=r_400_0 TR:VR 108:4 24:0 chr16 80680548 r_418 C . PASS END=80977428;SVTYPE=DUP;SVLEN=296880 TR:VR 58:10 29:0 chr17 62412379 d_490 A . PASS END=62412432;SVTYPE=DEL;SVLEN=-53;SVINSLEN=12;SVINSSEQ=CTAGAGCAAGCA TR:VR 52:20 13:0 chr19 33448067 r_510 T . PASS END=34324371;SVTYPE=DUP;SVLEN=876304 TR:VR 44:8 28:0 chr3 2296516 r_557 A . PASS END=55081393;SVTYPE=DEL;SVLEN=-52784877 TR:VR 48:17 33:0 chr6 130247870 r_676 A . PASS END=135046617;SVTYPE=DEL;SVLEN=-4798747 TR:VR 28:7 29:0 chr6 56827725 r_624 G . PASS END=134733994;SVTYPE=DUP;SVLEN=77906269 TR:VR 29:5 31:0 chr10 76393590 d_206 A . PASS END=76393711;SVTYPE=DEL;SVLEN=-121 TR:VR 30:17 12:0 chr12 127833692 d_269 T . PASS END=127833804;SVTYPE=DEL;SVLEN=-112 TR:VR 35:6 15:0 chr12 72580465 r_257 G . PASS END=72582483;SVTYPE=DUP;SVLEN=2018;SVINSLEN=9;SVINSSEQ=CTTAGAGAA TR:VR 59:9 14:0 chr14 48471456 r_346_0 T T]chr6:65460410] . PASS SVTYPE=BND;MATEID=r_346_1 TR:VR 132:45 34:0 chr6 65460410 r_346_1 T T]chr14:48471456] . PASS SVTYPE=BND;MATEID=r_346_0 TR:VR 132:45 34:0 chr17 36950634 r_425 G . PASS END=37146506;SVTYPE=DUP;SVLEN=195872 TR:VR 31:6 29:0 chr17 62581293 r_478_0 G G]chr17:63031992] . Too_low_VAF SVTYPE=BND;MATEID=r_478_1 TR:VR 164:6 29:0 chr17 63031992 r_478_1 G G]chr17:62581293] . Too_low_VAF SVTYPE=BND;MATEID=r_478_0 TR:VR 164:6 29:0 chr3 2297639 r_558 T . PASS END=55092426;SVTYPE=DUP;SVLEN=52794787 TR:VR 39:9 32:0 chr6 132902265 d_828 A . PASS END=132902352;SVTYPE=DEL;SVLEN=-87 TR:VR 21:14 12:0 chr6 56829704 r_625 C . Too_low_VAF END=59526378;SVTYPE=DUP;SVLEN=2696674 TR:VR 419:4 268:0 chrX 67620651 i_876 T . PASS END=67620667;SVTYPE=INS;SVINSLEN=69;SVINSSEQ=ATATATAATATATATAATATATAATATATATATATTATATATAATATATATAATAATAGTGAGATTCAA TR:VR 31:9 11:0 chr10 76394008 r_66_0 C C]chr6:118538136] . PASS SVTYPE=BND;MATEID=r_66_1 TR:VR 36:16 33:0 chr6 118538136 r_66_1 T T]chr10:76394008] . PASS SVTYPE=BND;MATEID=r_66_0 TR:VR 36:16 33:0 chr11 73529875 r_144_0 C ]chr14:50245592]A . Too_low_VAF SVTYPE=BND;MATEID=r_144_1 TR:VR 168:4 28:0 chr14 50245592 r_144_1 A A[chr11:73529875[ . Too_low_VAF SVTYPE=BND;MATEID=r_144_0 TR:VR 168:4 28:0 chr12 72580459 r_258_0 G G]chr12:72580571] . PASS SVTYPE=BND;MATEID=r_258_1 TR:VR 53:9 11:0 chr12 72580571 r_258_1 A A]chr12:72580459] . PASS SVTYPE=BND;MATEID=r_258_0 TR:VR 53:9 11:0 chr14 49015187 r_347_0 A [chr17:55434350[A . Too_low_VAF SVTYPE=BND;MATEID=r_347_1 TR:VR 295:5 40:0 chr17 55434350 r_347_1 A [chr14:49015187[A . Too_low_VAF SVTYPE=BND;MATEID=r_347_0 TR:VR 295:5 40:0 chr17 63031205 r_479_0 T [chr17:63032245[C . PASS SVTYPE=BND;MATEID=r_479_1 TR:VR 53:7 18:0 chr17 63032245 r_479_1 C [chr17:63031205[C . PASS SVTYPE=BND;MATEID=r_479_0 TR:VR 53:7 18:0 chr6 133129536 r_677 G . PASS END=133885698;SVTYPE=DUP;SVLEN=756162 TR:VR 57:22 26:0 chr6 56898348 r_626 A . Too_low_VAF END=139964846;SVTYPE=DEL;SVLEN=-83066498;SVINSLEN=16;SVINSSEQ=TAAAACATGTGCATAA TR:VR 84:3 32:0 chrX 68349391 i_877 T . PASS END=68349391;SVTYPE=INS;SVINSLEN=317;SVINSSEQ=AAAAAGTCAGGAAATAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGAAGGCCGAGGCAGGCAGATCACGAGGTCAGGAGATGGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGAAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA TR:VR 40:4 21:0 chr10 76400677 r_67_0 T [chr6:118507312[C . PASS SVTYPE=BND;MATEID=r_67_1 TR:VR 40:13 27:0 chr6 118507312 r_67_1 C [chr10:76400677[C . PASS SVTYPE=BND;MATEID=r_67_0 TR:VR 40:13 27:0 chr11 73543559 r_145_0 C C[chr14:50244150[ . Too_low_VAF SVTYPE=BND;MATEID=r_145_1 TR:VR 167:3 31:0 chr14 50244150 r_145_1 C ]chr11:73543559]C . Too_low_VAF SVTYPE=BND;MATEID=r_145_0 TR:VR 167:3 31:0 chr12 72594115 r_259 A . PASS END=74673989;SVTYPE=DUP;SVLEN=2079874 TR:VR 142:57 30:0 chr14 49065923 r_348_0 A AC]chr14:57580202] . PASS SVTYPE=BND;MATEID=r_348_1;SVINSLEN=1;SVINSSEQ=C TR:VR 105:7 33:0 chr14 57580202 r_348_1 C CG]chr14:49065923] . PASS SVTYPE=BND;MATEID=r_348_0;SVINSLEN=1;SVINSSEQ=G TR:VR 105:7 33:0 chr17 43053625 r_426 C . PASS END=43674744;SVTYPE=DUP;SVLEN=621119 TR:VR 44:8 42:0 chr17 63314115 r_480 T . Too_low_VAF END=63673157;SVTYPE=DUP;SVLEN=359042 TR:VR 148:4 32:0 chr6 133133864 r_678 A . PASS END=133884415;SVTYPE=DUP;SVLEN=750551 TR:VR 107:19 22:0 chrX 78855021 d_931 G . Too_small_size END=78855058;SVTYPE=DEL;SVLEN=-37 TR:VR 20:7 19:0 chr10 76401471 r_68_0 T T]chr6:99423865] . PASS SVTYPE=BND;MATEID=r_68_1 TR:VR 80:14 29:0 chr6 99423865 r_68_1 T T]chr10:76401471] . PASS SVTYPE=BND;MATEID=r_68_0 TR:VR 80:14 29:0 chr11 49360259 r_91 T . PASS END=49532002;SVTYPE=DUP;SVLEN=171743 TR:VR 53:7 24:0 chr11 73868242 r_146_0 G GT]chr11:126494529] . PASS SVTYPE=BND;MATEID=r_146_1;SVINSLEN=1;SVINSSEQ=T TR:VR 156:9 28:0 chr11 126494529 r_146_1 T TA]chr11:73868242] . PASS SVTYPE=BND;MATEID=r_146_0;SVINSLEN=1;SVINSSEQ=A TR:VR 156:9 28:0 chr12 72606512 r_260_0 C C]chr12:74347915] . PASS SVTYPE=BND;MATEID=r_260_1 TR:VR 145:45 28:0 chr12 74347915 r_260_1 A A]chr12:72606512] . PASS SVTYPE=BND;MATEID=r_260_0 TR:VR 145:45 28:0 chr14 49242499 r_349_0 G [chr14:49242821[G . PASS SVTYPE=BND;MATEID=r_349_1 TR:VR 113:8 14:0 chr14 49242821 r_349_1 G [chr14:49242499[G . PASS SVTYPE=BND;MATEID=r_349_0 TR:VR 113:8 14:0 chr14 77178476 r_401_0 T TCCCCTTCTCTCCCCTCCCCTCTCCCCCCTTCTCTCCCCCTTCTCTCCCCTCACCTCTCTCCCCCTTCTCTCTCCCCTCCCCTCTCCCCCTTCTCTCTGCCTTCTCTCCCTTCCCCTGTCCCCCTTCTCTCCCCTCCCCCTTCTCTCCCCTCCCCCCTTCTCTCCCCTCCCCCCTTCTCTCCCCTCCCCCTTCT]chr16:18342391] . Too_low_VAF SVTYPE=BND;MATEID=r_401_1;SVINSLEN=193;SVINSSEQ=CCCCTTCTCTCCCCTCCCCTCTCCCCCCTTCTCTCCCCCTTCTCTCCCCTCACCTCTCTCCCCCTTCTCTCTCCCCTCCCCTCTCCCCCTTCTCTCTGCCTTCTCTCCCTTCCCCTGTCCCCCTTCTCTCCCCTCCCCCTTCTCTCCCCTCCCCCCTTCTCTCCCCTCCCCCCTTCTCTCCCCTCCCCCTTCT TR:VR 95:4 67:1 chr16 18342391 r_401_1 G GAGAAGGGGGAGGGGAGAGAAGGGGGGAGGGGAGAGAAGGGGGGAGGGGAGAGAAGGGGGAGGGGAGAGAAGGGGGACAGGGGAAGGGAGAGAAGGCAGAGAGAAGGGGGAGAGGGGAGGGGAGAGAGAAGGGGGAGAGAGGTGAGGGGAGAGAAGGGGGAGAGAAGGGGGGAGAGGGGAGGGGAGAGAAGGGG]chr14:77178476] . Too_low_VAF SVTYPE=BND;MATEID=r_401_0;SVINSLEN=193;SVINSSEQ=AGAAGGGGGAGGGGAGAGAAGGGGGGAGGGGAGAGAAGGGGGGAGGGGAGAGAAGGGGGAGGGGAGAGAAGGGGGACAGGGGAAGGGAGAGAAGGCAGAGAGAAGGGGGAGAGGGGAGGGGAGAGAGAAGGGGGAGAGAGGTGAGGGGAGAGAAGGGGGAGAGAAGGGGGGAGAGGGGAGGGGAGAGAAGGGG TR:VR 95:4 67:1 chr16 26478031 r_413_0 T ]chr4:19083929]C . Too_low_VAF SVTYPE=BND;MATEID=r_413_1 TR:VR 203:4 90:1 chr4 19083929 r_413_1 C C[chr16:26478031[ . Too_low_VAF SVTYPE=BND;MATEID=r_413_0 TR:VR 203:4 90:1 chr17 63371905 r_481_0 G [chr17:67589360[A . PASS SVTYPE=BND;MATEID=r_481_1 TR:VR 175:41 29:0 chr17 67589360 r_481_1 A [chr17:63371905[A . PASS SVTYPE=BND;MATEID=r_481_0 TR:VR 175:41 29:0 chr18 20993647 r_498 A . PASS END=21137142;SVTYPE=DUP;SVLEN=143495 TR:VR 54:8 21:0 chr20 31065882 d_638 A . Too_low_VAF END=31066147;SVTYPE=DEL;SVLEN=-265;SVINSLEN=6;SVINSSEQ=AGGAAT TR:VR 558:3 227:1 chr5 128969616 d_815 C . PASS END=128972781;SVTYPE=DEL;SVLEN=-3165 TR:VR 29:5 15:0 chr6 136065541 r_679_0 C [chr6:136065699[G . PASS SVTYPE=BND;MATEID=r_679_1 TR:VR 41:26 9:0 chr6 136065699 r_679_1 G [chr6:136065541[G . PASS SVTYPE=BND;MATEID=r_679_0 TR:VR 41:26 9:0 chrX 79060092 r_740 A . PASS END=79135742;SVTYPE=DUP;SVLEN=75650 TR:VR 64:5 37:0 chr10 77134292 d_207 A . PASS END=77134728;SVTYPE=DEL;SVLEN=-436 TR:VR 105:15 15:0 chr11 54835097 r_92 C . PASS END=54976768;SVTYPE=DUP;SVLEN=141671 TR:VR 65:10 37:0 chr11 73868267 r_147 T . PASS END=126500072;SVTYPE=DUP;SVLEN=52631805 TR:VR 155:9 30:0 chr12 73531725 r_261_0 T T]chr12:73532872] . PASS SVTYPE=BND;MATEID=r_261_1 TR:VR 71:17 28:0 chr12 73532872 r_261_1 A A]chr12:73531725] . PASS SVTYPE=BND;MATEID=r_261_0 TR:VR 71:17 28:0 chr14 49356836 r_350_0 T [chr17:55500761[TATATTTTATATATTATAAAATATAATATATTTTATATATTATAAAATATAATATTTTATATATTATAAAATATAATATTTTATATATTATAAAATATAATATATTATAAAATATAATATATTATATATTATAATATATAATATATAATATATTATAATAT . PASS SVTYPE=BND;MATEID=r_350_1;SVINSLEN=160;SVINSSEQ=TATATTTTATATATTATAAAATATAATATATTTTATATATTATAAAATATAATATTTTATATATTATAAAATATAATATTTTATATATTATAAAATATAATATATTATAAAATATAATATATTATATATTATAATATATAATATATAATATATTATAATA TR:VR 317:27 35:0 chr17 55500761 r_350_1 T [chr14:49356836[TATTATAATATATTATATATTATATATTATAATATATAATATATTATATTTTATAATATATTATATTTTATAATATATAAAATATTATATTTTATAATATATAAAATATTATATTTTATAATATATAAAATATATTATATTTTATAATATATAAAATATAT . PASS SVTYPE=BND;MATEID=r_350_0;SVINSLEN=160;SVINSSEQ=TATTATAATATATTATATATTATATATTATAATATATAATATATTATATTTTATAATATATTATATTTTATAATATATAAAATATTATATTTTATAATATATAAAATATTATATTTTATAATATATAAAATATATTATATTTTATAATATATAAAATATA TR:VR 317:27 35:0 chr14 81182906 r_402 A . PASS END=81469451;SVTYPE=DUP;SVLEN=286545 TR:VR 42:6 40:0 chr17 63829455 d_491 T . Too_low_VAF END=63829543;SVTYPE=DEL;SVLEN=-88 TR:VR 276:11 16:0 chr21 44094531 r_546 G . PASS END=44255289;SVTYPE=DUP;SVLEN=160758 TR:VR 58:3 33:0 chr3 4379353 r_559 A . PASS END=5121749;SVTYPE=DUP;SVLEN=742396 TR:VR 42:11 31:0 chr6 137182761 r_680 A . PASS END=140069652;SVTYPE=DUP;SVLEN=2886891 TR:VR 105:16 39:0 chr10 77154501 r_69 G . PASS END=83952239;SVTYPE=DUP;SVLEN=6797738 TR:VR 136:7 43:0 chr11 73869309 r_148_0 G [chr11:126492771[C . PASS SVTYPE=BND;MATEID=r_148_1 TR:VR 141:8 29:0 chr11 126492771 r_148_1 C [chr11:73869309[C . PASS SVTYPE=BND;MATEID=r_148_0 TR:VR 141:8 29:0 chr12 73531826 r_262 T . PASS END=75534209;SVTYPE=DUP;SVLEN=2002383;SVINSLEN=3;SVINSSEQ=GGC TR:VR 86:15 43:0 chr14 49398886 r_351 C . Too_low_VAF END=49488262;SVTYPE=DUP;SVLEN=89376 TR:VR 232:6 46:0 chr14 88676347 r_403 T . PASS END=88740068;SVTYPE=DUP;SVLEN=63721 TR:VR 39:7 28:0 chr17 50052759 r_427 G . PASS END=54963759;SVTYPE=DUP;SVLEN=4911000 TR:VR 260:190 32:0 chr17 63930860 r_482 A . Too_low_VAF END=66282356;SVTYPE=DEL;SVLEN=-2351496 TR:VR 273:7 37:0 chr6 137525227 r_681 G . PASS END=137529350;SVTYPE=DEL;SVLEN=-4123 TR:VR 72:4 21:0 chr10 77155384 r_70_0 A A]chr10:77888453] . PASS SVTYPE=BND;MATEID=r_70_1 TR:VR 169:16 27:0 chr10 77888453 r_70_1 A A]chr10:77155384] . PASS SVTYPE=BND;MATEID=r_70_0 TR:VR 169:16 27:0 chr11 73871709 r_149 T . Too_low_VAF END=126494733;SVTYPE=DEL;SVLEN=-52623024 TR:VR 141:7 30:0 chr12 37395822 r_218_0 G [chr12:73753675[T . PASS SVTYPE=BND;MATEID=r_218_1 TR:VR 93:14 29:0 chr12 73753675 r_218_1 T [chr12:37395822[T . PASS SVTYPE=BND;MATEID=r_218_0 TR:VR 93:14 29:0 chr12 73753610 r_263_0 G G]chr12:74651659] . PASS SVTYPE=BND;MATEID=r_263_1 TR:VR 137:9 35:0 chr12 74651659 r_263_1 T T]chr12:73753610] . PASS SVTYPE=BND;MATEID=r_263_0 TR:VR 137:9 35:0 chr14 49609111 r_352 G . Too_low_VAF END=49858382;SVTYPE=DUP;SVLEN=249271;SVINSLEN=1;SVINSSEQ=C TR:VR 270:4 36:0 chr14 89360874 d_314 C . PASS END=89361006;SVTYPE=DEL;SVLEN=-132 TR:VR 75:10 44:1 chr17 63936481 r_483 T . PASS END=64014306;SVTYPE=DEL;SVLEN=-77825;SVINSLEN=120;SVINSSEQ=AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGGAAGGAAGGAAGGGAAAGAGAAAGAAAGGAAGGAAGAGAGAGAGAGAGAAGGAGAGAGAGAGGGAAGGAAGGAAGGAAGAAA TR:VR 340:29 34:0 chr18 3585474 r_496 A . PASS END=3599760;SVTYPE=DEL;SVLEN=-14286 TR:VR 22:8 25:0 chr2 157611189 i_433 T . PASS END=157611189;SVTYPE=INS;SVINSLEN=289;SVINSSEQ=CTCTCTTCACCCTGGAAAACAGACCCAAGAGGCTTATACCCAGAACAAGCAGAGTGATTTTTTTTTTTTGCCAAGTATTGATGCCCCTCTTTCCCTGGATTAGCGAGTCAGTTTATTAGCTGGATTTTAGAGATTTTTTTTTTAATAATAGATGCCTTTGAAATCCTTTCTAAAGTGCAAGGATTCCACGATCAATAAGTGTTCATTACAATTAACTTTGATTTGTTTTCCAACTACTGAAAACTGATAATATTATATTTATGCCTTTGAATTTTTCAAAAAGGAAACT TR:VR 25:6 16:0 chr20 31628643 d_641 T . PASS END=31628816;SVTYPE=DEL;SVLEN=-173 TR:VR 56:7 16:0 chr3 51325378 r_562_0 G G]chr3:55091818] . PASS SVTYPE=BND;MATEID=r_562_1 TR:VR 46:16 32:0 chr3 55091818 r_562_1 A A]chr3:51325378] . PASS SVTYPE=BND;MATEID=r_562_0 TR:VR 46:16 32:0 chr6 137557159 i_694 T . PASS END=137557160;SVTYPE=INS;SVINSLEN=306;SVINSSEQ=ACTCCCCTGTGCTCTGACAGAGTACTCGTGTGATCTTGGCTTACTGCAGCCTTTGCCTTCTGGGTTCCAGAGATTCTCCTACCTCAGCCTCACAAGTAGCTGGGATCACAGGCGTGTACCATCACGCCTGGCTAATTTTTATATTGTTAGTAGAGACGGGGTTTCACTTTGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCATGCCTGGCCTTTTCTTTTTCTTTTTTTCTTTTTTTTTCTTTTTCTTT TR:VR 78:4 20:0 chr10 77395348 r_71_0 T ]chr6:95111019]CTAATGCCGG . PASS SVTYPE=BND;MATEID=r_71_1;SVINSLEN=9;SVINSSEQ=CTAATGCCG TR:VR 85:6 33:0 chr6 95111019 r_71_1 G GCGGCATTAG[chr10:77395348[ . PASS SVTYPE=BND;MATEID=r_71_0;SVINSLEN=9;SVINSSEQ=CGGCATTAG TR:VR 85:6 33:0 chr11 73872075 r_150_0 G [chr11:126500330[C . PASS SVTYPE=BND;MATEID=r_150_1 TR:VR 148:15 33:0 chr11 126500330 r_150_1 C [chr11:73872075[C . PASS SVTYPE=BND;MATEID=r_150_0 TR:VR 148:15 33:0 chr12 37415716 r_219 T . PASS END=75370241;SVTYPE=DEL;SVLEN=-37954525 TR:VR 82:5 35:0 chr12 73839975 r_264 C . PASS END=74307063;SVTYPE=DEL;SVLEN=-467088 TR:VR 65:13 28:0 chr17 50054230 r_429_0 C C]chr17:53712801] . PASS SVTYPE=BND;MATEID=r_429_1 TR:VR 267:184 42:0 chr17 53712801 r_429_1 A A]chr17:50054230] . PASS SVTYPE=BND;MATEID=r_429_0 TR:VR 267:184 42:0 chr2 158099497 r_534 T . PASS END=158346938;SVTYPE=DUP;SVLEN=247441 TR:VR 63:9 35:0 chr3 51332812 r_563 C . PASS END=60399423;SVTYPE=DUP;SVLEN=9066611 TR:VR 31:11 30:0 chr6 137557450 d_829 C . PASS END=137557520;SVTYPE=DEL;SVLEN=-70;SVINSLEN=12;SVINSSEQ=GTGCCCAGCCTT TR:VR 78:4 20:0 chr6 61531997 r_627 T . PASS END=61574809;SVTYPE=DUP;SVLEN=42812 TR:VR 66:5 18:0 chr10 77405265 r_72_0 A ]chr6:144374156]T . PASS SVTYPE=BND;MATEID=r_72_1 TR:VR 105:23 38:0 chr6 144374156 r_72_1 T T[chr10:77405265[ . PASS SVTYPE=BND;MATEID=r_72_0 TR:VR 105:23 38:0 chr11 73874182 r_151 T . PASS END=126495823;SVTYPE=DEL;SVLEN=-52621641 TR:VR 161:15 28:0 chr12 37494193 r_220 T . PASS END=72581645;SVTYPE=DEL;SVLEN=-35087452 TR:VR 91:9 34:0 chr12 74954075 r_265_0 A [chr12:75249947[G . PASS SVTYPE=BND;MATEID=r_265_1 TR:VR 64:4 23:0 chr12 75249947 r_265_1 G [chr12:74954075[G . PASS SVTYPE=BND;MATEID=r_265_0 TR:VR 64:4 23:0 chr16 33338570 d_412 T . PASS END=33338630;SVTYPE=DEL;SVLEN=-60;SVINSLEN=33;SVINSSEQ=GGCTGGGCCGCTTGGCTGGCTTGGCTGGCTGGC TR:VR 108:6 58:1 chr3 5261899 r_560_0 G [chr3:61683182[C . PASS SVTYPE=BND;MATEID=r_560_1 TR:VR 48:8 29:0 chr3 61683182 r_560_1 C [chr3:5261899[C . PASS SVTYPE=BND;MATEID=r_560_0 TR:VR 48:8 29:0 chr4 189836645 i_608 A . PASS END=189836645;SVTYPE=INS;SVINSLEN=5451;SVINSSEQ=GTACACACACCATCACCACCACATCACCACTGCACTAGCACACACACCACCACCACCACATCACCACTGCACTACATACACACCATCACCACCACATCACCACTGCACTAGCACACACACCATCACCAACACATCACCACTGCACTAGTACACACACCACCATCACCACATCACCACTGCACTAGTACACACACCACCACCACCACATCACCACTGCACTAGCACACACACCACCATCACCACATCACCACTGCACTAGTACACACACCATCACCACCACATCACCACTGCACTAATACACACACCATCACCACCACATCACCACTGCACTAATACACACACCATCACCACATCACCACTGCACTAGTACACACACCACCACCACCACATCACCACTGCACTAGTACACACACCACCATCACCACCACATCACCACTGCACTAGTACACACACCATCACCACCACATCACCACTGCACTAGTACACACACCACCACCACCATCACCACCACATCACCACTGCACTAGTACACACACCACCACCACCACATCACCACTGCACCAGTACACACACCACCACCACATCACCACTGCACTAGCACACACACCATCACCACCACATCACCACTGCACTAGCACACACACACCATCACCACATCACCACTGCACTAGCACACACACCATCACCACCACCACATCACCACTGCACTAGCACACACACCACCACCACCACATCACCACTGCACTAGCACACACACCATCACCAACACATCACCACTGCACTAGCACACACACCATCACCAACACATCACCACTGCACTAGTACACACACCATCACCACCACATCACCACTGCACTAGCACACACACCATCACCACATCACCACTGCACTAGTACACACACCATCACCACATCACCACTGCACTAGTACACACACCACCACCACCACATCACCACTGCACTAGTACACACACCATCACCACCACATCACCACTGCACTAGTACACACACCATCACCATCACATCACCACTGCACTAGCACACACACCATCACCACCACATCACCACTGCACCAGTACACACACCATCACCACCACATCACCACTGCACTAGCACACACACCATCACCACATCACCACTGCACTAGTACACACATCACCACCACCACATCACCACTGCACTAGCACACACACCATCACCACCACATCACCAATACCACAAGCACACACACCACCACCACCACATCACCACTGCACTAGTGCACACCACCACCACCACATCACCACTGCACTAGTACACACACCACCACCACCACATCACCACTGCACTAGCACACACACCACCACCACCACATCACCAATACCACAAGCACACACACCACCACCAGCACATCACCACTGCACTAGTACACACACCATCACCACCACATCACCAATACCACAAGTACACACACCACCACCACCATCACCACTGCACTAGCACACACACCATCACCACCACATCACCAATACCAGCAAGCAATACACACCATCACCACCACATCACCACTGCACTAGTACACACACCATCACCAACACATCACCACTGCACTAGTACACACACCACCACCACATCACCACTGCACTAGTACACACACCATCACCACCACATCACCACTGCACTAGTACACACACCACCACCACCACATCACCACTGCACTAGCACACACACCATCACCACCACATCACCAATACCACAAGCACACACACCACCACCACCACATCACCACTGCACTAGTACACACATCACCACCACCACATCACCACTGCACTAGCACACACACCATCACCAACACATCACCAATACCACAAGCACACACACCACCACCAGCACATCACCACTGCACTAGTACACACACCACCATCATCACATCACCACTGCACTAGCACACACACCACCACCACCACATCACCACTGCACTAGCACACACACCATCACCACCACATCACCACTGCACTAGCACACACACCATCACCACCACATCACCACTGCACTAGCACACACACCATCACCACCATCACCACTGTACAACACACACACACCACCACCACATCACCACTGCACTAGTACACACACCACCACCACCACATCACCACTGCACTAGCACACACACCATCACCAACACATCACCAATACCACAAGCACACACACCACCACCAGCACATCACCACTGCACTAGCACACACACCATCACCACCATACTACTACTACCACAAGCACACACACCACCACCACCATCACCACTGCACTAGCACACACCATCACCACCATCACCAATACCACAAGTACACACACCACCACCACCACATCACCACTGCACTAGTACACACACCATCACCACCATCACCACTGCACTAGTACACACACCACCACCACCACATCACCACTGCACTAGCACACACACCACCACCACCACATCACCAATACCACAAGTACACACACCACCACCAGCACATCACCACTGCACTAGCACACACACCATCACCACATCACCACTGCACTAGCACACACACCATCACCACCACATCACCACTGCACTAGCACACACACCATCACCACATCACCACTGCACTAGCACACACACCATCACCAACACATCACCACTGCACTAGTACACACCACCACCACATCACCAATACCACCACACACACACCACCACCAGCACATCACCACTGCACTAGTACACACACCATCACCACATCACCACTGCACTAGCACACACACCACCACCACCACATCACCACTGCACCAGTACACACACCACCACCACCATCACCACTGCACTAGCACACACACACCACCACCACATCACCACTGCACTAGTACACACACCACCACCACATCACCACTGCACTAGTACACACCAGCACATCACCACTGCACTAGTACACACACCACCATCATCACATCACCACTGCACTAGTACACACACCATCACCACATCACCACTGCACTAGTACACACACCATCACCACCACATCACCACTGCACCAGTACACACACCATCACCACATCACCACTGCACTAGCACACACACCATCACCACCACATCACCACTGCACTAGTACACACATCACCACCACCACATCACCACTGCACTAGCACACACACCATCACCACCACATCACCACTGCACTAGCACACACACCACCACCACCACATCACCACTGCACCAGTACACACACCACCACCACCACATCACCACTGCACTAGCACACACACCACCACCACCACATCACCACTGCACTAGTACACACACCACCACCACATCACCACTGCACTAGTACACACCAGCACATCACCACTGCACTAGTACACACACCACCATCATCACATCACCACTGCACTAGTACACACACCATCACCACATCACCACTGCACTAGTACACACACCATCACCACCACATCACCACTGCACCAGTACACACACCATCACCACATCACCACTGCACTAGTACACACACCATCACCACATCACCACTGCACTAGTACACACACCACCATCACCATCACCACTGCACTAATACACACACCATCACCACATCACCACTGCACTAGTACACACACCACCACCACCACATCACCACTGCACCAGTACACACACCACCACCACATCACCACTGCACTAGCACACACACCATCACCACCACCATCACCACTGCACTAGCACACACACACCATCACCACATCACCACTGCACTAGCACACACACCATCACCACCACCACATCACCACTGCACTAGCACACACACCACCACCACCACATCACCACTGCACTAGCACACACACCACCACCACCACATCACCACTGCACTAGCACACACACCACCATCACCACATCACCACTGCACTAGTACACACACCACCACCACCACATCACCACTGCACCAGTACACACACCACCACCACATCACCACTGCACTAGCACACACACCATCACCACCACATCACCACTGCACTAGCACACACACACCATCACCACATCACCACTGCACTAGCACACACACCATCACCACCACCATCACCACTGCACTAGCACACACACCACCACCACCACATCACCACTGCACTAGCACACACACCACCACCACCACATCACCAATACCACAAGCACACACACCACCACCAGCACATCACCACTGCACTAGCACACACACCATCACCACCACATCACCAATACCACAAGCACACACACCATCACCACCACATCACCACTGCACTAGTACACACACCATCACCAACACATCACCACTGCACTAGTACACACACCACCACCACATCACCACTGCACTAGTACACACACCATCACCACCACATCACCACTGCACTAGTACACACACCACCACCACCACATCACCACTGCACTAGCACACACACCATCACCACCACATCACCAATACCACAAGCACACACACCACCACCACCATCACCACTGCACTAGTACACACATCACCACCACCACATCACCACTGCACTAGCACACACACCATCACCATCACATCACCACACCACAAGCACACACACCACCACCACCACATCACCACTGCACTAGCACACACACCATCACCACATCACCAATACCACAAGCACACACACCACCACCACCACATCACCACTGCACTAGTACACACACCATCACCACCACATCACCACTGCACTAGTACACACACCACCACCACCACATCACCACTGCACTAGCACACACACCACCACCACCACATCACCAATACCACAAGCACACACACCACCACCAGCACATCACCACTGCACTAGCACACACACCATCACCACATCACCACTGCACTAGCACACACACCATCACCACCACATCACCACCGGTACTAGCACACACACCATCACCACATCACCACTGCACTAGCACACACACCATCACCAACACATCACCACTGCACTAGTACACACACCACCACCACATCACCAATACCACAAGCACACACACCACCACCAGCACATCACCACTGCACCAGTACACACACCATCACCACATCACCACTGCACTAGTACACACACCACCACCACCACATCACTACTGCAACAGTACACACCACCACCACCACATCACTACCTGCACCAGTACACACACCACCACCACCACATCACCACTGCACTAGCACACACACCACCACCACTACATCACCACCGCACTAGTACACACACCACCACCACATCACCACTGCACTAGTACACACCAGCACATCACCACTGCACTAGTACACACACCACCATCATCACATCACCACTGCACTAGTACACACACCACCACCACCACATCACCACTGCACTAGTACACACACCATCACCATCACATCACCACTGCACTAGTACACACACCATCACCACATCACCACTGCACTAGTACACACACCATCACCACCACATCACCACTGCACCA TR:VR 31:6 12:0 chr5 139250694 i_668 G . PASS END=139250722;SVTYPE=INS;SVINSLEN=342;SVINSSEQ=CCTGGGTGATAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAGAACATTATGAGATTTTTTTTGCAATTTTTTTAAAGTTCATTAGCTGTCATCAGTTAGTTATTTAGTCGTCAGTTAGTGTATTTTATGTGTGGCCCAAGACAATTCTTCTTCCAATGTGGTCCAGGGAAGCCAAAAGATTGGATACCCCTGGTTTAAAGGGAGAAGATTCAATAACAACACCTGCAGAATGTAAAGAGGGTCATAAGCAATACAGTCAAAAGGGGCAGAGCACTCATGTCTTCTCTGGAGGACCTGAGAAAGGCTTTAACAACATCTTTCTTCCGCTTAACATCCC TR:VR 19:7 12:0 chr6 137558853 i_695 C . Too_small_size END=137558857;SVTYPE=INS;SVINSLEN=40;SVINSSEQ=TGATAGTTTTCCATACCTGCACTCCAGGTAACTTCCAGCA TR:VR 74:4 20:0 chr8 1471314 d_857 C . PASS END=1471325;SVTYPE=INS;SVINSLEN=148;SVINSSEQ=AGCCTTTCCCGACCCCTCCAGGCTTTCCTGACCCCCTCCAGCCTTTCCCGACCCCTCCAGGCTTTCCCGACCCCCTGCAGCCTTTCCCGACCCCCTCCAGGCTTTCCCGACCCCTCCAGCCTTTCCCGACCCCCTCCAGCCTTTCCCG TR:VR 23:8 11:0 chr10 42074431 d_195 T . Too_low_VAF END=42074535;SVTYPE=INS;SVINSLEN=104;SVINSSEQ=TGAATGCAATCATCGAATGGTCTCGAATGGAATCATCTTCAAATGGAAAGGAATGGAATCATCGCATAGAATCGAATGGAATTATCATCGAATGGACTCGAATG TR:VR 542:4 359:0 chr10 77711738 r_73_0 A [chr19:52311100[A . PASS SVTYPE=BND;MATEID=r_73_1 TR:VR 123:9 32:0 chr19 52311100 r_73_1 A [chr10:77711738[A . PASS SVTYPE=BND;MATEID=r_73_0 TR:VR 123:9 32:0 chr11 55067074 i_83 G . PASS END=55067074;SVTYPE=INS;SVINSLEN=172;SVINSSEQ=CTCCCAAATGTCCATTTGCAGAATGGACAAAAACGTGTTTCCAAACTGCTGAATCAAAAGAATGTTTTAACTCTGTTAGGGGAAAGCACACTTCTCAAAGCAGGTTCTTAGAAAACTTCTTTCTAGTTTTTAACTTCATATGTTAACTTTTTCACCTTAGGCCTCTATGCAC TR:VR 21:3 15:0 chr11 73891705 r_152_0 T T]chr11:126503062] . PASS SVTYPE=BND;MATEID=r_152_1 TR:VR 146:16 21:0 chr11 126503062 r_152_1 C C]chr11:73891705] . PASS SVTYPE=BND;MATEID=r_152_0 TR:VR 146:16 21:0 chr12 37596376 r_221_0 T TTTGATAGTGCAGTTTTGAAACACTCTTTTTGTAGAATCTGCAAGTTGACATTTGGTGCAAATTGAGGCATATAAGGAAATGGAAATATCTTCACATAAAAACTAGACACAAGCATTCTCAGAAACATCTTG]chr12:72608565] . PASS SVTYPE=BND;MATEID=r_221_1;SVINSLEN=131;SVINSSEQ=TTGATAGTGCAGTTTTGAAACACTCTTTTTGTAGAATCTGCAAGTTGACATTTGGTGCAAATTGAGGCATATAAGGAAATGGAAATATCTTCACATAAAAACTAGACACAAGCATTCTCAGAAACATCTTG TR:VR 106:9 31:0 chr12 72608565 r_221_1 A ACAAGATGTTTCTGAGAATGCTTGTGTCTAGTTTTTATGTGAAGATATTTCCATTTCCTTATATGCCTCAATTTGCACCAAATGTCAACTTGCAGATTCTACAAAAAGAGTGTTTCAAAACTGCACTATCAA]chr12:37596376] . PASS SVTYPE=BND;MATEID=r_221_0;SVINSLEN=131;SVINSSEQ=CAAGATGTTTCTGAGAATGCTTGTGTCTAGTTTTTATGTGAAGATATTTCCATTTCCTTATATGCCTCAATTTGCACCAAATGTCAACTTGCAGATTCTACAAAAAGAGTGTTTCAAAACTGCACTATCAA TR:VR 106:9 31:0 chr12 75370251 r_266_0 C C]chr12:75370365] . PASS SVTYPE=BND;MATEID=r_266_1 TR:VR 38:5 17:0 chr12 75370365 r_266_1 T T]chr12:75370251] . PASS SVTYPE=BND;MATEID=r_266_0 TR:VR 38:5 17:0 chr14 50016187 r_353_0 G [chr17:61846909[GAAAGGTCCTAGGCCTTAGCAGAGAGTACTGACTGTCTA . PASS SVTYPE=BND;MATEID=r_353_1;SVINSLEN=38;SVINSSEQ=GAAAGGTCCTAGGCCTTAGCAGAGAGTACTGACTGTCT TR:VR 374:24 36:0 chr17 61846909 r_353_1 A [chr14:50016187[AGACAGTCAGTACTCTCTGCTAAGGCCTAGGACCTTTCA . PASS SVTYPE=BND;MATEID=r_353_0;SVINSLEN=38;SVINSSEQ=AGACAGTCAGTACTCTCTGCTAAGGCCTAGGACCTTTC TR:VR 374:24 36:0 chr17 50057495 r_431 C . PASS END=55332640;SVTYPE=DUP;SVLEN=5275145 TR:VR 76:13 33:0 chr17 64450872 r_484 C . Too_low_VAF END=65053390;SVTYPE=DEL;SVLEN=-602518 TR:VR 136:4 29:0 chr18 45862431 r_499_0 G [chr18:46357002[C . PASS SVTYPE=BND;MATEID=r_499_1 TR:VR 65:4 29:0 chr18 46357002 r_499_1 C [chr18:45862431[C . PASS SVTYPE=BND;MATEID=r_499_0 TR:VR 65:4 29:0 chr3 5262015 r_561_0 C C]chr3:51333277] . PASS SVTYPE=BND;MATEID=r_561_1 TR:VR 47:8 33:0 chr3 51333277 r_561_1 C C]chr3:5262015] . PASS SVTYPE=BND;MATEID=r_561_0 TR:VR 47:8 33:0 chr5 14315770 d_795 A . Too_small_size END=14315816;SVTYPE=DEL;SVLEN=-46 TR:VR 25:17 13:0 chr6 61809535 r_628 G . PASS END=64097235;SVTYPE=DEL;SVLEN=-2287700 TR:VR 58:3 25:0 chr1 248945675 r_18_0 G ]chr9:138240714]AGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAT . Too_low_VAF SVTYPE=BND;MATEID=r_18_1;SVINSLEN=43;SVINSSEQ=AGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTA TR:VR 202:8 188:1 chr9 138240714 r_18_1 T TTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCT[chr1:248945675[ . Too_low_VAF SVTYPE=BND;MATEID=r_18_0;SVINSLEN=43;SVINSSEQ=TAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCT TR:VR 202:8 188:1 chr10 77711735 r_74_0 C C]chr10:77712389] . PASS SVTYPE=BND;MATEID=r_74_1 TR:VR 103:9 14:0 chr10 77712389 r_74_1 T T]chr10:77711735] . PASS SVTYPE=BND;MATEID=r_74_0 TR:VR 103:9 14:0 chr11 74220169 r_153_0 A A]chr11:74237116] . PASS SVTYPE=BND;MATEID=r_153_1 TR:VR 79:53 23:0 chr11 74237116 r_153_1 T T]chr11:74220169] . PASS SVTYPE=BND;MATEID=r_153_0 TR:VR 79:53 23:0 chr12 77866703 r_267_0 A [chr6:39035219[TGCTTCT . PASS SVTYPE=BND;MATEID=r_267_1;SVINSLEN=6;SVINSSEQ=TGCTTC TR:VR 35:9 32:0 chr6 39035219 r_267_1 T [chr12:77866703[GAAGCAT . PASS SVTYPE=BND;MATEID=r_267_0;SVINSLEN=6;SVINSSEQ=GAAGCA TR:VR 35:9 32:0 chr14 50055024 r_354_0 C C]chr17:57532972] . Too_low_VAF SVTYPE=BND;MATEID=r_354_1 TR:VR 263:5 27:0 chr17 57532972 r_354_1 T T]chr14:50055024] . Too_low_VAF SVTYPE=BND;MATEID=r_354_0 TR:VR 263:5 27:0 chr17 50067460 r_432_0 C C]chr17:55368065] . PASS SVTYPE=BND;MATEID=r_432_1 TR:VR 71:10 24:0 chr17 55368065 r_432_1 A A]chr17:50067460] . PASS SVTYPE=BND;MATEID=r_432_0 TR:VR 71:10 24:0 chr18 46567678 r_500_0 A A]chr6:144670194] . PASS SVTYPE=BND;MATEID=r_500_1 TR:VR 62:7 31:0 chr6 144670194 r_500_1 G G]chr18:46567678] . PASS SVTYPE=BND;MATEID=r_500_0 TR:VR 62:7 31:0 chr3 5264925 i_548 G . PASS END=5264925;SVTYPE=INS;SVINSLEN=55;SVINSSEQ=CCTCCCAAAGTGTTGGGATTACAGGCATGAGCCACTGCGTCTGGCCGATTTCATC TR:VR 27:8 18:0 chr5 57769587 r_600 C . PASS END=58456672;SVTYPE=DUP;SVLEN=687085 TR:VR 57:6 44:0 chr6 61854464 r_629 A . PASS END=106695167;SVTYPE=DUP;SVLEN=44840703 TR:VR 86:8 32:0 chr9 15461721 r_729 G . PASS END=15772727;SVTYPE=DUP;SVLEN=311006 TR:VR 37:4 29:0 chr10 77736794 r_75_0 C CGGG]chr6:150603258] . PASS SVTYPE=BND;MATEID=r_75_1;SVINSLEN=3;SVINSSEQ=GGG TR:VR 102:11 34:0 chr6 150603258 r_75_1 C CCCC]chr10:77736794] . PASS SVTYPE=BND;MATEID=r_75_0;SVINSLEN=3;SVINSSEQ=CCC TR:VR 102:11 34:0 chr11 56670346 r_93 C . PASS END=57502798;SVTYPE=DUP;SVLEN=832452 TR:VR 60:10 25:0 chr11 74236618 r_154 A . PASS END=127394792;SVTYPE=DUP;SVLEN=53158174 TR:VR 80:50 31:0 chr14 50232198 r_355 A . PASS END=50251061;SVTYPE=DUP;SVLEN=18863 TR:VR 181:14 21:0 chr17 50111021 r_433 T . PASS END=51798483;SVTYPE=DUP;SVLEN=1687462 TR:VR 114:21 29:0 chr17 64961355 r_485_0 T TCT]chr17:64966709] . PASS SVTYPE=BND;MATEID=r_485_1;SVINSLEN=2;SVINSSEQ=CT TR:VR 84:8 17:0 chr17 64966709 r_485_1 C CAG]chr17:64961355] . PASS SVTYPE=BND;MATEID=r_485_0;SVINSLEN=2;SVINSSEQ=AG TR:VR 84:8 17:0 chr19 40781261 r_511 G . PASS END=41036303;SVTYPE=DUP;SVLEN=255042 TR:VR 58:13 52:0 chr20 47895071 i_470 A . PASS END=47895071;SVTYPE=INS;SVINSLEN=5605;SVINSSEQ=GGGACAGGCAATGTTGTTATAATTCGAGTGGTCTGGCAGCTGGCAACTCGGGGAGGAGAAGTCTTGCTGGAGTTTGAGGGGTCATGGAGCTGCCAACCCAGGGAGGAGCCATTTTGTTGTAGTTCAAGGGTCAGGAAGCTGGCGACCCAGGGAGGAGAGGTCTTGTTCTAGTTTCAGGGTTGTGGAGCTGCTGACCCAGGGAGGAGCATTGTTGTTTTAGTTCGAGGGCGTGGAAGCTGGCGACCCAGGGAGGAGAGGTCTTGTTCTGGTTTGAGGGTCGTGGAGCCGCAGACCCAGGGAGGAGCAATGTTGATGTAAGTTGAGGGTCCGGTAGCTGGCAACCTGGGGAGGAGAAGTCTTGTTCGAGTTTGAGGGTCGTGGAGCTGCCGACCCAGAGAGGAGGAGCAATTTTGTTGTCGTTCGAGTGTCAGGAAGCTGGCGACTCAGGTAGGAGAAATTTTGTTATAGTTTCAGGGTTGTGGAGCTGCAGACCCAGGGAGGAGCAAGGTTGTTGTAATTCGAGGGTCAGGAAGCTGGCGACCCAGGGAGGAGAGGTCTTGTTCTGGTCTGAGGGTCATGGACCTGCAGACCCAGGGAGGAGCAGTGTTGTTGTAGTTTGAAGGTCAGGAAGCTGGCGGCCCAGGGAGGAGAGGTCTTGTTCTAGTTTGAGGGTCTGGAGCTGCCGACGCAGGGAGGAGCAATGTTGTTGTAATTTGAGGGTCCGGAAGCTGGCAACCCAAGGAGGAGAAGTCTTGTTCGAGTTTGAGGGTTGTGGAGCAGCCGACCCAGGGAGGAGCAATTTTGTTGTAGTTTGAGGGTCCAGAAGCTGACGACCCAGGGAGGAGAGGTCTTGTTGTAGTTTGAGGGTCGTGGGCTGCTGACCCAGGGAGGAGCAATTTGGTTGTAGTTTGAGGGTCCGGAAGCTGACAACCCAGGGAGGAGAGGTCTTGTTTTAGCTTGAGGGTTGTGGAGCTGCCGACCCAGGCAGGAGCAACGTTGTTGTAGTTCGAGGGTCCGGAAGCTGGCGACCCAGGGAGGAGAGGTCTTGTTCTAGTTTGAGGGTCGTGGAGCTGCAGACCCAGGGAGGAGCAATTTTGTTGTAGTTCGAGGGTCAGGAAGCTGGCGACCCAGGGAGGAGAGGTCTTGTTCTGGTCTGAGGGTCGTGTGGAGCTGCTGAACCAGGGAGGAGCAATTTTGTTGTAGTTCGAGGGTCAGGAAGCTGGCGACCCAGGGAGGAGAGGTCTTGTTCTAGTTTGATGTTCGTGGAGCTGCAGACCCAGGCAGGAGCAACGTTGTTGCAATTCGAGGATCCGGAAGCTGGCGACTTAGGGAGGAGTACGTCTTGTTCTAGTTTCAGGGTCGAGCTGCAGACTGAGGCAGGAGCAATGTTGTTATAGTTGGAGGTTCAGAAAGCTGGCGACCCAGGGAGGAGAGGTCTTGTTGTGGTCTGAGGGTCGTGGAGCTGCTGACCCAGGGAGGAGCAATTTTGTTGTAGTTCGAGGGTCAGGAAGCTGGCGACCCAGGGAGGAGAGGTCTTGTTCTAGATTGATTTTTGTGGAGCTGAGGACCCAGGCAGGAGCAAGGTTGTTGCAATTTGAGGATCCGGAAGCTGGAGACTTAGGGAGGAGACCTCTTGTTCTAGTTTCAGGGTCGTGGAGCTGCAGACTGAGGCAGGAGCATTATTGTTATAGTTGGAGGGTCAGAAAGCTGGCGACCCAGGGAGGAGAGGTCTTGTTGTGGTCTGAGGGTCGTGGAGCTGCTGACCCAGGGAGGAGCAATTTTGTTGTAGTTCGAGGGTCTGGAAGCTGGCGACCCAGGGAGGAGAGGTCTTGTTCTAGATTGATTTTTTCGTGGAGCTGAAGACCCAGGCAGGAGCAACGTTGTTGCAATTCGAGGATCTGGAAGCTGGAGACTTAGGGAGGAGACGTGTTGTTCTAGTTTCAGGGTCATGGAGCTGCAGACTGAGGCAGGAGCATTGTTGTTATAGTTCGAGGGTCAGAAAGCTGGCGATCCAGGGAGGAGAGGTCTTGTTCTGGTCTGAGGGCCGTGGAGCTGCTGACGCAGGGGAGGAGCAATTTTGTTGTAGTTCGAGGGTCAGGAAGCTGGCGACCCAGGGAGGAGAGGTCTTCTTCTGGTGTGAGGGTCGTGGAGCTGCAGACCCAGGGAGGAGCAATTTTGTTGTAGTTTGAGGGTCTGGAAGCTGGCGACCCCGGGAGAGGTCTTGTACTAGTCTGAGGGTCGTGGAGCTGCAGACCCAGGGAGGGGCAATGTTGTTGTAATTCGAGGGTCTGGCAGCTGGCAACTCGGGGAGGAGAAGTGTTGTTGGAGTTTGAGGGTCATGGAGCTGCCAACCCAGGGAGGAGCAATTTTGTTGTAGTTCAAGGGTCCGGAAGCTGGTGACCCAGGGAGGAGAGAACTGATCTGGTCTGAGGGTCGTGGAGCTACAGACCCAGGGAGGAGCAATGTTGTTGTAGTTCGAGGGTCCGGTAGCTGGTAACCCGGGGAAGAGAAGTCTTGTTCTGAGTTTGAGGGTCGTGGAGCTGCAGACCCAGGGAGGAGCAATTCTTGTTGTAGTTCGAGGGTCCGGAAGCTGGCGACCCAGGGAGGAGAGGTCTTGTTCTGGTCTGAGGGTCATGGAGCTGCTGTCCCAGGGAGGAGCAATTTTGTTGTGGTTCGAGGTCAGGAAGCTGGCGACCCAGGGAGGAGAGGGTCTTGTTCTAGTTTGATGTTGGTGGAGCTGCAGACCCAGGCAGGAGGAACGTTGCTGTAGTTCGAGGGTCAGAAAGCTGGCGATGCAGGGAGAGGTCTTGTTGGAGCTTGAGGGTCGTGGAGCTGCCGACCCAGGGAGGAGCAATTTTGTTGTAGTTCGAGGGTTGGGGAAGCTGGCGACCCAGGGAGGAGAGGTCTTGTTCTAGATTGATTTTCAGGGAGCTGAAGACCCAGGCAGGAGCAAGGTTGTTGCAATTCGAGGATCCGGAAGCTGGAGACTTAGGGAGGAGAGGTCTTGTTCTAGATTGATTTTTGTGGAGCTGAAGACCCAGCAGGAGCAACGTTGTTGCAATTCGAGGATCCAGAAGCTGGAGACTTAGGGAGTTGGAGACGTCTTGTTCTAGTTTCAGGGTCGTGGAGCTGCAGACTGAGGCAGGAGCATTGTTGCTGTTGTAGTTCGAGGGTCATGTGAGCTGGCGATCCAGGGAGGAGAGGTCTTGTTCTGGTCTGAGGGTCGTGGAGCTGCAGACCCAGGGAGGAGCAATTTTGTTGTAGTTCGAGGGTCAGAAAGCTGGCAGACCCAGGGAGGAGAGGTCTTCTTCTGGTGTGAGGGTCGTGGAGCTGCAGACGTGGGGAGGAGCAATTTTGTTGTAGTGTGAGGGTCAGGAAGCTGGCGACCCAGGGAGGAGAGGTCTTGTTCTGGTCTGAGGGTCGTGGAGCTGCTGACCCAGGGAGGAGCAATTTTGTTGTAGTTCGAGGGTCAGGAAGCTGGCGACCCAGGGAGGAGAGGTCTTGTTCTAGTTTGATGTTCGGGGAGCTGCAGACCCAGGCAGGAGCAACGTTGTTGCAATTCTCAGGGATCCGGAAGCTGGAGACTTAGGGAGGAGATGAGATCTTGTTCTAGTTTCAGGGTCGTGGAGCTGCAGACTGAGGCAGGGAGCATTGTTGTTATAGTTGGAGGTTCAGGAAGCTGGCGACCCAGGGAGGAGAGGTCTTGTTGTGGTCTGAGGGTCGTGGAGCTGCTGACCCAGGGAGGAGCAATTTTGTTGTAGTTCGAGGGTCAGGAAGCTGGCGACCCAGAGGAGGAGAGGTCTTGTTCTAGATTGATTTTTGTGGAGCTGAGGACTCCAGGCAGGAGCAAGGTTGTTGCAATTTGAGGATCCGGAAGCTGGAGACTTAGGGAGGAGACGTCTTGTTCTAGTTTCAGGGTCGTGGAGCTGTAGACTGAGGCAGGAGCATTATTGTTATAGTTGGAGGGTCAGAAAGCTGGCGACCCAGGGAGGAGAGGTCTTGTTGTGGTCTGAGGGTCGTGGAGCTGCTGACCCAGGGAGGAGCAATTTTGTTGTAGTTCGAGGGTCTGGAAGCTGGCGACCCAGGGAGGAGAGGTGCTTGTTCTAGATTGATTTTTGTGGAGCTGAAGACCCAGGCAGGAGCAACGTTGTTCTAATTCGAGGATCTGGAAGCTGGAGACTTAGGGAGGAGACGTGTTTTTCTAGTTTCAGGGTCATGGAGCTGCAGACCGAGGCAGGAGCATTGTTGTTATAGTTCGAGGTTCAGAAAGCTGGCGACCCAGGGAGGAGAGGTCTTGTTGTGGTCTGAGGGTCGTGGAGCTGCTGACGCAGGAGGAGCAATTTTGTTGTAGTTCGAGGGTCAGGAAGCTGGCGACCCAGGGGAGAGGTCTTCTTCTGGTGTGAGGGTCGTGGAGCTGCAGACCCAGGGAGGAGCAATTTTGTTGTAGTTTGAGGGTCTGGAAGCTGGCGACCCCGGGAGAGGTCTTGTACTAGTCTGAGGGTCGTGGAGCTGCAGACCCAGGGAGGGGCAATGTTGTTGTAATTCGAGGGTCTGGCAGCTGGAACTCGGGGAGCCGGAGCTAGTGTTGTTGGAGTTTGAGGGTCATGGAGCTGCCAACTTGAGGGAGGAGCAATTTTGTTGTAGTTCAAGGGTCCGGAAGCTGGTGACCCAGGGAGGAGAGGTCTTGGATCTGGTCTGAGGGTGGAGCCAGACCCAGGGAGGATCCGCAATGTTGCCATTGTATTTTGAGGGTCCGGTAGCTGGTAACCCGGGGAAGAGAAGTCTTGTTCGAGTTTGAGGGTTTGGAGCTGCAGACCCAGGGAGGAGCAATTTTGTTGTTATTCGAGGGTCAGGAAGCTGGCGACGCAGGGAGGAGAGGTCTTGTTCTAGTTTGATGTTGGTGGAGCTGCAGACCCAGGCAGGAGGAACGTTGCTGTAGTTCGAGGGTCAGAAAGCTGGCGATGCAGGGAGAGGTCTTGTTGGAGTTTGAGGGTCGGAGCTGCCGACCCAGGGAGGAGCAAATTTTGTTGTAGTTCGAGGGGTCAGGAAGCTGGCGACCCAGGGAAGAGAGGTCTTGTTCTAGATTGATTTTTTGTGGAGCTGAAGACCCAGGCAGGAGCAAGGTTGTTGCATTCGAGTGATCTGGAAGCTGGAGACTTAGGGAGGAGAGGTCTTGTTCTAGATTGATTTTTGTGGAGCTGAAGACCCAGGCAGGAGCAACGTTGTTGCAATTCGAGAGATCCGGAAGCTGGAGACTTAGGGGAGGAGACGTCTTGTTCTAGTTTCAGGGTCGTGGAGCTGCAGACTGAGGCAGGAGCATTGTTGTTATAGTTCGAGGGTCAGAAAGCTGGCGACCCAGGGAGGAGAGGTCTTGTTCTGGTCTGAGGGTCGTGGAGCTGCAGACCCAGGGAGGAGCAATTTTGTTGTAGTTCGAGGGTCAGGAAGCTGGCGACCCAGGGAGGAGAGGTTCTTCTTCTGGTGTGTGGGTCGCGGAGCTGCAGGCCGCGGGGAGGAGCAATTTTGTTGCAGTTCGACGGCTGAGGAAGCTGGCGACCCAGGGAGAGGTCTTGTTCTAGTCTGAGGGTCGTGGAGCTGCAGACCCAGG TR:VR 70:5 37:0 chr21 5307327 i_506 A . PASS END=5307328;SVTYPE=INS;SVINSLEN=169;SVINSSEQ=GTTTTGAAATGGTGTTTTTAGAATCTGCAAGTCAGCATTTGGAGCGCTTTGAGGACCATAGTGGAAAAGGAAATATCTTCACATAAAAACTAGACAGAAGAATTCTGACAGACATCTTTTTCATGTGCGTTAATCTCACAAGGTTGAGCCTTTCTTTTGATTGAACAGT TR:VR 78:5 54:1 chr3 55091098 r_564_0 A [chr3:55091817[A . PASS SVTYPE=BND;MATEID=r_564_1 TR:VR 37:9 19:0 chr3 55091817 r_564_1 A [chr3:55091098[A . PASS SVTYPE=BND;MATEID=r_564_0 TR:VR 37:9 19:0 chr6 138151430 r_684_0 T [chr6:138777946[G . PASS SVTYPE=BND;MATEID=r_684_1 TR:VR 198:12 36:0 chr6 138777946 r_684_1 G [chr6:138151430[G . PASS SVTYPE=BND;MATEID=r_684_0 TR:VR 198:12 36:0 chr10 78057990 i_61 A . PASS END=78057990;SVTYPE=INS;SVINSLEN=65;SVINSSEQ=TAGTACATATATATTGTATATATTTATATATAAGTATATAAAATATGTGCTGTCTCTTTTTTTTT TR:VR 28:7 19:0 chr11 57778271 r_94 G . PASS END=59677477;SVTYPE=DEL;SVLEN=-1899206 TR:VR 38:21 25:0 chr11 77446045 r_155 C . PASS END=78703542;SVTYPE=DUP;SVLEN=1257497 TR:VR 83:59 25:0 chr12 79839288 r_268 T . PASS END=79925825;SVTYPE=DUP;SVLEN=86537 TR:VR 57:10 36:0 chr14 50243818 r_356 G . PASS END=50246545;SVTYPE=DEL;SVLEN=-2727 TR:VR 124:12 11:0 chr17 50430207 r_434_0 G G]chr17:53641911] . PASS SVTYPE=BND;MATEID=r_434_1 TR:VR 69:10 31:0 chr17 53641911 r_434_1 T T]chr17:50430207] . PASS SVTYPE=BND;MATEID=r_434_0 TR:VR 69:10 31:0 chr17 64961392 r_486_0 T [chr17:65986480[T . PASS SVTYPE=BND;MATEID=r_486_1 TR:VR 147:8 29:0 chr17 65986480 r_486_1 T [chr17:64961392[T . PASS SVTYPE=BND;MATEID=r_486_0 TR:VR 147:8 29:0 chr18 50043570 d_513 A . PASS END=50043622;SVTYPE=DEL;SVLEN=-52 TR:VR 36:6 19:0 chr3 66445582 r_565 C . PASS END=66546293;SVTYPE=DUP;SVLEN=100711 TR:VR 48:4 38:0 chr6 138151715 r_685 G . PASS END=150795836;SVTYPE=DEL;SVLEN=-12644121 TR:VR 136:13 39:0 chr6 64086611 r_631_0 A A]chr6:64098021] . PASS SVTYPE=BND;MATEID=r_631_1 TR:VR 48:5 17:0 chr6 64098021 r_631_1 T T]chr6:64086611] . PASS SVTYPE=BND;MATEID=r_631_0 TR:VR 48:5 17:0 chr9 27435873 r_730 T . PASS END=27540641;SVTYPE=DUP;SVLEN=104768 TR:VR 37:7 30:0 chr10 78515324 r_76_0 T [chr6:137776727[A . PASS SVTYPE=BND;MATEID=r_76_1 TR:VR 136:12 34:0 chr6 137776727 r_76_1 A [chr10:78515324[A . PASS SVTYPE=BND;MATEID=r_76_0 TR:VR 136:12 34:0 chr11 61805351 r_95 T . PASS END=62727924;SVTYPE=DUP;SVLEN=922573 TR:VR 49:5 30:0 chr11 77452577 r_156 C . PASS END=127394631;SVTYPE=DEL;SVLEN=-49942054 TR:VR 75:50 28:0 chr12 38162776 r_222_0 T TTTTTTTTTTATTATTATTATTACTATACTTTAAGTTTTAGG[chr21:13974614[ . PASS SVTYPE=BND;MATEID=r_222_1;SVINSLEN=41;SVINSSEQ=TTTTTTTTTATTATTATTATTACTATACTTTAAGTTTTAGG TR:VR 43:5 37:1 chr21 13974614 r_222_1 C ]chr12:38162776]CCTAAAACTTAAAGTATAGTAATAATAATAATAAAAAAAAAC . PASS SVTYPE=BND;MATEID=r_222_0;SVINSLEN=41;SVINSSEQ=CCTAAAACTTAAAGTATAGTAATAATAATAATAAAAAAAAA TR:VR 43:5 37:1 chr12 7993734 d_232 A . PASS END=7993825;SVTYPE=DEL;SVLEN=-91 TR:VR 34:9 9:0 chr14 21188280 r_296 T . PASS END=21400466;SVTYPE=DUP;SVLEN=212186 TR:VR 22:3 23:0 chr14 50355833 r_357_0 A A]chr17:55428067] . Too_low_VAF SVTYPE=BND;MATEID=r_357_1 TR:VR 309:4 38:0 chr17 55428067 r_357_1 C C]chr14:50355833] . Too_low_VAF SVTYPE=BND;MATEID=r_357_0 TR:VR 309:4 38:0 chr17 65500379 i_316 T . PASS END=65500379;SVTYPE=INS;SVINSLEN=360;SVINSSEQ=GGTAGTAAGTGGTATAGGGTGGCATAGGGTGGTGGTAATGTGTGTAGTGGTGGAAGGATAGTGGTAGGGTGTGGTGGAAGGGTGGTAGGTGGTGGTAGGGGTGGTGGTATGGTGGTGTGGGTGATGGTAGGCTGGTTGTAGTGTGGTGGTAGGGTGGTGTAGGGGTGGAGGTAGGGTGGTTGTATGGTGGTGTAGGGTGATTGTAGGGTGGTGGTAGGGGTGGATGGTGGTTGTAGGGTGGTAGGAGTGGTGGTAGGGTAGTTTTAGGGTGGCAGTGTGGTAAAGGTGGTGTAGGATGATGGTAGTGTGGCATAGGGTGGCACAGTGGGGTGGTTGTATTGGTGGTCTAGGGTACAGTGG TR:VR 75:4 13:0 chr18 50394294 r_501_0 T T[chr9:3193864[ . PASS SVTYPE=BND;MATEID=r_501_1 TR:VR 56:6 31:0 chr9 3193864 r_501_1 A ]chr18:50394294]A . PASS SVTYPE=BND;MATEID=r_501_0 TR:VR 56:6 31:0 chr19 44347744 r_512 T . PASS END=45559802;SVTYPE=DUP;SVLEN=1212058 TR:VR 56:4 30:0 chr3 69351758 d_701 T . PASS END=69351851;SVTYPE=DEL;SVLEN=-93 TR:VR 19:3 23:0 chr6 138330081 r_686 A . Too_low_VAF END=138538438;SVTYPE=DUP;SVLEN=208357 TR:VR 194:8 44:0 chr6 64098263 r_632 A . PASS END=106302096;SVTYPE=DUP;SVLEN=42203833 TR:VR 132:37 25:0 chr8 18209486 r_716 T . PASS END=18292161;SVTYPE=DUP;SVLEN=82675 TR:VR 45:4 35:0 chr1 31605246 i_11 A . PASS END=31605251;SVTYPE=INS;SVINSLEN=60;SVINSSEQ=GGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTA TR:VR 20:6 15:0 chr10 79676618 r_77_0 T TCAGCACATATCCATAG]chr6:133129629] . PASS SVTYPE=BND;MATEID=r_77_1;SVINSLEN=16;SVINSSEQ=CAGCACATATCCATAG TR:VR 94:22 31:0 chr6 133129629 r_77_1 G GCTATGGATATGTGCTG]chr10:79676618] . PASS SVTYPE=BND;MATEID=r_77_0;SVINSLEN=16;SVINSSEQ=CTATGGATATGTGCTG TR:VR 94:22 31:0 chr11 77597726 r_157 C . PASS END=127394264;SVTYPE=DUP;SVLEN=49796538 TR:VR 119:83 30:0 chr12 38493859 r_223_0 T ]chr6:97214792]G . PASS SVTYPE=BND;MATEID=r_223_1 TR:VR 45:17 34:0 chr6 97214792 r_223_1 G G[chr12:38493859[ . PASS SVTYPE=BND;MATEID=r_223_0 TR:VR 45:17 34:0 chr12 8152142 r_199 G . PASS END=8210156;SVTYPE=DUP;SVLEN=58014 TR:VR 68:7 35:0 chr14 21217472 r_297_0 C CAATTACCAGAATTATATTTTCTTTAAAAATTATGTTAGAGTTT]chr14:26283425] . PASS SVTYPE=BND;MATEID=r_297_1;SVINSLEN=43;SVINSSEQ=AATTACCAGAATTATATTTTCTTTAAAAATTATGTTAGAGTTT TR:VR 35:5 28:0 chr14 26283425 r_297_1 A AAAACTCTAACATAATTTTTAAAGAAAATATAATTCTGGTAATT]chr14:21217472] . PASS SVTYPE=BND;MATEID=r_297_0;SVINSLEN=43;SVINSSEQ=AAACTCTAACATAATTTTTAAAGAAAATATAATTCTGGTAATT TR:VR 35:5 28:0 chr14 50493817 r_358_0 G G]chr17:61485181] . PASS SVTYPE=BND;MATEID=r_358_1 TR:VR 288:79 32:0 chr17 61485181 r_358_1 G G]chr14:50493817] . PASS SVTYPE=BND;MATEID=r_358_0 TR:VR 288:79 32:0 chr16 36003973 i_259 T . PASS END=36003973;SVTYPE=INS;SVINSLEN=172;SVINSSEQ=TCCTTTGTTTGCGCAGTTATGAAACACGCTTTTTGTGCAATCTGCAAATGGATATTTGAAGCGCTTTGAGGCCTATGGTGGAAGAGGAAATATCTTCATTTTAAAACTGCATGGAAGCACTCTCAGAAAATACTTTGTGATACGTGCATTCAACTCACAGAGTTGAAGCTCT TR:VR 43:7 18:0 chr17 51025843 r_435_0 G [chr17:55332988[T . PASS SVTYPE=BND;MATEID=r_435_1 TR:VR 80:13 41:0 chr17 55332988 r_435_1 T [chr17:51025843[T . PASS SVTYPE=BND;MATEID=r_435_0 TR:VR 80:13 41:0 chr18 55586185 i_349 G . PASS END=55586185;SVTYPE=INS;SVINSLEN=226;SVINSSEQ=CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAACAGCAGCAGCAACAGCAACAACAGCAACAGCAACAGCAACAGCAACAGCAGCAACAGCAACAGCAACAGCAGCAGCAACAGCAGCAGCAACAGCAGCAGCAACAGCAGCAGCAAC TR:VR 41:8 10:0 chr3 70247517 r_566 T . PASS END=70296635;SVTYPE=DUP;SVLEN=49118 TR:VR 50:7 37:0 chr5 15942914 d_796 T . Too_small_size END=15942951;SVTYPE=DEL;SVLEN=-37 TR:VR 28:5 12:0 chr5 62743126 r_601 A . PASS END=62784233;SVTYPE=DUP;SVLEN=41107 TR:VR 60:5 39:0 chr6 138365414 d_830 G . PASS END=138365573;SVTYPE=DEL;SVLEN=-159 TR:VR 109:10 11:0 chr6 64145488 r_633_0 C C]chr6:106479101] . Too_low_VAF SVTYPE=BND;MATEID=r_633_1 TR:VR 143:5 34:0 chr6 106479101 r_633_1 T T]chr6:64145488] . Too_low_VAF SVTYPE=BND;MATEID=r_633_0 TR:VR 143:5 34:0 chr8 1955037 i_765 T . PASS END=1955037;SVTYPE=INS;SVINSLEN=103;SVINSSEQ=TTCTCTGGATGGGTGGCCAGGTGCTTCCTGGAAGGAGTGCCACTCACTGTTCCTCTGGAGGATAGCCAGGTGCATCCTGGAAGGGAGGGCACACTCTCCTAGT TR:VR 23:3 14:0 chr9 34199593 r_731 T . PASS END=37137638;SVTYPE=DUP;SVLEN=2938045;SVINSLEN=1;SVINSSEQ=G TR:VR 33:3 35:0 chr10 42093728 d_201 C . Too_low_VAF END=42093949;SVTYPE=DEL;SVLEN=-221;SVINSLEN=88;SVINSSEQ=ATTGAATGGAATCGAATGGAGTAATCATCGAATGGAATCAAATGGAATTATCATCAAATGGAATCGAATGGAATTATTGAATGGAATC TR:VR 348:3 264:0 chr10 79998077 r_78_0 C C[chr6:133107662[ . PASS SVTYPE=BND;MATEID=r_78_1 TR:VR 63:22 39:0 chr6 133107662 r_78_1 A ]chr10:79998077]A . PASS SVTYPE=BND;MATEID=r_78_0 TR:VR 63:22 39:0 chr11 77608369 r_158 T . PASS END=80249223;SVTYPE=DEL;SVLEN=-2640854 TR:VR 137:91 25:0 chr12 399087 d_229 G . PASS END=401136;SVTYPE=DEL;SVLEN=-2049 TR:VR 32:5 17:0 chr12 85662258 r_269 A . PASS END=85752019;SVTYPE=DUP;SVLEN=89761 TR:VR 56:12 32:0 chr14 23323446 r_299_0 A [chr17:57132404[CCTCCAGCCGACCCACCCTCTGCCCCTCCAACACGCCCCACCTCACCCCCTCCAGCACACACCCACCCCCCCTCACCCCTCCAGCACGCCCACCCTCACCCCCTCCAACACACCCACCCCTCACCCCCTCCAACACACCCACCCTCACCCCCTCCAGCACG . PASS SVTYPE=BND;MATEID=r_299_1;SVINSLEN=160;SVINSSEQ=CCTCCAGCCGACCCACCCTCTGCCCCTCCAACACGCCCCACCTCACCCCCTCCAGCACACACCCACCCCCCCTCACCCCTCCAGCACGCCCACCCTCACCCCCTCCAACACACCCACCCCTCACCCCCTCCAACACACCCACCCTCACCCCCTCCAGCAC TR:VR 169:45 28:0 chr17 57132404 r_299_1 G [chr14:23323446[GTGCTGGAGGGGGTGAGGGTGGGTGTGTTGGAGGGGGTGAGGGGTGGGTGTGTTGGAGGGGGTGAGGGTGGGCGTGCTGGAGGGGTGAGGGGGGGTGGGTGTGTGCTGGAGGGGGTGAGGTGGGGCGTGTTGGAGGGGCAGAGGGTGGGTCGGCTGGAGGG . PASS SVTYPE=BND;MATEID=r_299_0;SVINSLEN=160;SVINSSEQ=GTGCTGGAGGGGGTGAGGGTGGGTGTGTTGGAGGGGGTGAGGGGTGGGTGTGTTGGAGGGGGTGAGGGTGGGCGTGCTGGAGGGGTGAGGGGGGGTGGGTGTGTGCTGGAGGGGGTGAGGTGGGGCGTGTTGGAGGGGCAGAGGGTGGGTCGGCTGGAGG TR:VR 169:45 28:0 chr14 50610390 r_359_0 C ]chr17:60135137]C . Too_low_VAF SVTYPE=BND;MATEID=r_359_1 TR:VR 447:4 33:0 chr17 60135137 r_359_1 C C[chr14:50610390[ . Too_low_VAF SVTYPE=BND;MATEID=r_359_0 TR:VR 447:4 33:0 chr17 52471768 r_436 G . PASS END=53704451;SVTYPE=DUP;SVLEN=1232683 TR:VR 74:11 41:0 chr17 66275171 d_493 A . PASS END=66275222;SVTYPE=DEL;SVLEN=-51;SVINSLEN=3;SVINSSEQ=AAC TR:VR 77:6 20:0 chr3 71063066 d_702 C . PASS END=71067567;SVTYPE=DEL;SVLEN=-4501 TR:VR 24:3 12:0 chr5 16521164 r_593 C . PASS END=16766209;SVTYPE=DUP;SVLEN=245045;SVINSLEN=1;SVINSSEQ=G TR:VR 50:8 35:0 chr5 62774862 r_602 T . PASS END=87064373;SVTYPE=DEL;SVLEN=-24289511 TR:VR 45:5 44:0 chr6 138791540 r_687_0 C [chr6:146199709[T . PASS SVTYPE=BND;MATEID=r_687_1 TR:VR 157:23 24:0 chr6 146199709 r_687_1 T [chr6:138791540[T . PASS SVTYPE=BND;MATEID=r_687_0 TR:VR 157:23 24:0 chr6 64443819 r_634 T . PASS END=64447848;SVTYPE=DEL;SVLEN=-4029 TR:VR 96:11 12:0 chr8 20348247 r_717 C . PASS END=21161963;SVTYPE=DEL;SVLEN=-813716 TR:VR 36:6 37:0 chr1 35898430 r_1 G . PASS END=35947135;SVTYPE=DUP;SVLEN=48705;SVINSLEN=1;SVINSSEQ=A TR:VR 58:4 32:0 chr10 81025941 r_79 A . PASS END=81426019;SVTYPE=DEL;SVLEN=-400078 TR:VR 101:9 25:0 chr11 67096502 r_96 A . PASS END=68288756;SVTYPE=DUP;SVLEN=1192254 TR:VR 57:7 36:0 chr11 77615402 r_159_0 G [chr11:80461972[C . PASS SVTYPE=BND;MATEID=r_159_1 TR:VR 105:65 36:0 chr11 80461972 r_159_1 C [chr11:77615402[C . PASS SVTYPE=BND;MATEID=r_159_0 TR:VR 105:65 36:0 chr12 88126888 r_270_0 C [chr12:88127115[A . PASS SVTYPE=BND;MATEID=r_270_1 TR:VR 40:8 20:0 chr12 88127115 r_270_1 A [chr12:88126888[A . PASS SVTYPE=BND;MATEID=r_270_0 TR:VR 40:8 20:0 chr14 23323446 r_298_0 A [chr17:57131424[ACCCCCTCCAACACACCCACCCTCACCCCCTCCAACACACCCACCCTCACCCCCTCCAGCACG . PASS SVTYPE=BND;MATEID=r_298_1;SVINSLEN=62;SVINSSEQ=ACCCCCTCCAACACACCCACCCTCACCCCCTCCAACACACCCACCCTCACCCCCTCCAGCAC TR:VR 169:44 29:0 chr17 57131424 r_298_1 G [chr14:23323446[GTGCTGGAGGGGGTGAGGGTGGGTGTGTTGGAGGGGGTGAGGGTGGGTGTGTTGGAGGGGGTG . PASS SVTYPE=BND;MATEID=r_298_0;SVINSLEN=62;SVINSSEQ=GTGCTGGAGGGGGTGAGGGTGGGTGTGTTGGAGGGGGTGAGGGTGGGTGTGTTGGAGGGGGT TR:VR 169:44 29:0 chr17 53285878 r_437 A . Too_low_VAF END=53624341;SVTYPE=DUP;SVLEN=338463 TR:VR 74:3 33:0 chr3 74608819 r_567 T . PASS END=74799991;SVTYPE=DEL;SVLEN=-191172 TR:VR 29:6 19:0 chr5 170020231 r_614 A . PASS END=170237508;SVTYPE=DUP;SVLEN=217277 TR:VR 55:6 34:0 chr6 139404926 r_688 C . PASS END=153230749;SVTYPE=DEL;SVLEN=-13825823 TR:VR 174:59 37:0 chr1 47361755 r_2 G . PASS END=48311071;SVTYPE=DUP;SVLEN=949316 TR:VR 44:7 33:0 chr11 68873925 r_97_0 G G]chr13:26471886] . PASS SVTYPE=BND;MATEID=r_97_1 TR:VR 79:12 34:0 chr13 26471886 r_97_1 A A]chr11:68873925] . PASS SVTYPE=BND;MATEID=r_97_0 TR:VR 79:12 34:0 chr11 77974390 r_160 G . Too_low_VAF END=78122338;SVTYPE=DUP;SVLEN=147948 TR:VR 124:5 26:0 chr12 40296178 r_224 T . PASS END=40299579;SVTYPE=DEL;SVLEN=-3401 TR:VR 110:17 24:0 chr12 88126993 r_271_0 A A]chr6:153440967] . PASS SVTYPE=BND;MATEID=r_271_1 TR:VR 87:15 35:0 chr6 153440967 r_271_1 T T]chr12:88126993] . PASS SVTYPE=BND;MATEID=r_271_0 TR:VR 87:15 35:0 chr14 23348022 r_300 A . PASS END=26798355;SVTYPE=DUP;SVLEN=3450333 TR:VR 148:8 38:0 chr14 50660420 r_360_0 A A]chr17:57694673] . PASS SVTYPE=BND;MATEID=r_360_1 TR:VR 323:148 24:0 chr17 57694673 r_360_1 C C]chr14:50660420] . PASS SVTYPE=BND;MATEID=r_360_0 TR:VR 323:148 24:0 chr17 53321609 r_438 C . PASS END=53348357;SVTYPE=DUP;SVLEN=26748;SVINSLEN=11;SVINSSEQ=TTGAAAAAATT TR:VR 89:9 22:0 chr17 67047314 d_494 G . PASS END=67047771;SVTYPE=DEL;SVLEN=-457;SVINSLEN=1;SVINSSEQ=A TR:VR 75:25 13:0 chr19 54226947 r_514_0 G G]chr19:54243630] . PASS SVTYPE=BND;MATEID=r_514_1 TR:VR 55:15 22:0 chr19 54243630 r_514_1 A A]chr19:54226947] . PASS SVTYPE=BND;MATEID=r_514_0 TR:VR 55:15 22:0 chr3 76207157 r_568 T . PASS END=76315388;SVTYPE=DUP;SVLEN=108231 TR:VR 42:6 24:0 chr5 174428773 d_818 A . PASS END=174434769;SVTYPE=DEL;SVLEN=-5996 TR:VR 22:3 31:0 chr6 67407355 i_685 A . PASS END=67407355;SVTYPE=INS;SVINSLEN=190;SVINSSEQ=AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATAAATATAATATATATATATATAAATATATATATAAATATATATATATAAATATATATATAATATATATATAAAATATATATAAAATATATATATAATATATATATATATATATATAATATATATAAATATATATATAAATATA TR:VR 28:7 15:0 chr7 159202666 i_763 T . PASS END=159202666;SVTYPE=INS;SVINSLEN=72;SVINSSEQ=GGGACCAGGATGCCCTATCCATGAGGAGACGGCCTGGGACCAGGATGCCCTGTCCATGAGGAGACGGCCTGG TR:VR 29:6 19:0