##fileformat=VCFv4.3
##fileDate=20230117
##source=nanomonsv-0.5.0
##reference=/projects/jfan_prj/jfan_prj/Nanopore_Testing/2021_nanopore_sv_testing/scratch/depth_testing/POG/COLO829/hg38_no_alt.fa
##contig=<ID=chr1,length=248956422>
##contig=<ID=chr2,length=242193529>
##contig=<ID=chr3,length=198295559>
##contig=<ID=chr4,length=190214555>
##contig=<ID=chr5,length=181538259>
##contig=<ID=chr6,length=170805979>
##contig=<ID=chr7,length=159345973>
##contig=<ID=chr8,length=145138636>
##contig=<ID=chr9,length=138394717>
##contig=<ID=chr10,length=133797422>
##contig=<ID=chr11,length=135086622>
##contig=<ID=chr12,length=133275309>
##contig=<ID=chr13,length=114364328>
##contig=<ID=chr14,length=107043718>
##contig=<ID=chr15,length=101991189>
##contig=<ID=chr16,length=90338345>
##contig=<ID=chr17,length=83257441>
##contig=<ID=chr18,length=80373285>
##contig=<ID=chr19,length=58617616>
##contig=<ID=chr20,length=64444167>
##contig=<ID=chr21,length=46709983>
##contig=<ID=chr22,length=50818468>
##contig=<ID=chrX,length=156040895>
##contig=<ID=chrY,length=57227415>
##contig=<ID=chrM,length=16569>
##contig=<ID=chr1_KI270706v1_random,length=175055>
##contig=<ID=chr1_KI270707v1_random,length=32032>
##contig=<ID=chr1_KI270708v1_random,length=127682>
##contig=<ID=chr1_KI270709v1_random,length=66860>
##contig=<ID=chr1_KI270710v1_random,length=40176>
##contig=<ID=chr1_KI270711v1_random,length=42210>
##contig=<ID=chr1_KI270712v1_random,length=176043>
##contig=<ID=chr1_KI270713v1_random,length=40745>
##contig=<ID=chr1_KI270714v1_random,length=41717>
##contig=<ID=chr2_KI270715v1_random,length=161471>
##contig=<ID=chr2_KI270716v1_random,length=153799>
##contig=<ID=chr3_GL000221v1_random,length=155397>
##contig=<ID=chr4_GL000008v2_random,length=209709>
##contig=<ID=chr5_GL000208v1_random,length=92689>
##contig=<ID=chr9_KI270717v1_random,length=40062>
##contig=<ID=chr9_KI270718v1_random,length=38054>
##contig=<ID=chr9_KI270719v1_random,length=176845>
##contig=<ID=chr9_KI270720v1_random,length=39050>
##contig=<ID=chr11_KI270721v1_random,length=100316>
##contig=<ID=chr14_GL000009v2_random,length=201709>
##contig=<ID=chr14_GL000225v1_random,length=211173>
##contig=<ID=chr14_KI270722v1_random,length=194050>
##contig=<ID=chr14_GL000194v1_random,length=191469>
##contig=<ID=chr14_KI270723v1_random,length=38115>
##contig=<ID=chr14_KI270724v1_random,length=39555>
##contig=<ID=chr14_KI270725v1_random,length=172810>
##contig=<ID=chr14_KI270726v1_random,length=43739>
##contig=<ID=chr15_KI270727v1_random,length=448248>
##contig=<ID=chr16_KI270728v1_random,length=1872759>
##contig=<ID=chr17_GL000205v2_random,length=185591>
##contig=<ID=chr17_KI270729v1_random,length=280839>
##contig=<ID=chr17_KI270730v1_random,length=112551>
##contig=<ID=chr22_KI270731v1_random,length=150754>
##contig=<ID=chr22_KI270732v1_random,length=41543>
##contig=<ID=chr22_KI270733v1_random,length=179772>
##contig=<ID=chr22_KI270734v1_random,length=165050>
##contig=<ID=chr22_KI270735v1_random,length=42811>
##contig=<ID=chr22_KI270736v1_random,length=181920>
##contig=<ID=chr22_KI270737v1_random,length=103838>
##contig=<ID=chr22_KI270738v1_random,length=99375>
##contig=<ID=chr22_KI270739v1_random,length=73985>
##contig=<ID=chrY_KI270740v1_random,length=37240>
##contig=<ID=chrUn_KI270302v1,length=2274>
##contig=<ID=chrUn_KI270304v1,length=2165>
##contig=<ID=chrUn_KI270303v1,length=1942>
##contig=<ID=chrUn_KI270305v1,length=1472>
##contig=<ID=chrUn_KI270322v1,length=21476>
##contig=<ID=chrUn_KI270320v1,length=4416>
##contig=<ID=chrUn_KI270310v1,length=1201>
##contig=<ID=chrUn_KI270316v1,length=1444>
##contig=<ID=chrUn_KI270315v1,length=2276>
##contig=<ID=chrUn_KI270312v1,length=998>
##contig=<ID=chrUn_KI270311v1,length=12399>
##contig=<ID=chrUn_KI270317v1,length=37690>
##contig=<ID=chrUn_KI270412v1,length=1179>
##contig=<ID=chrUn_KI270411v1,length=2646>
##contig=<ID=chrUn_KI270414v1,length=2489>
##contig=<ID=chrUn_KI270419v1,length=1029>
##contig=<ID=chrUn_KI270418v1,length=2145>
##contig=<ID=chrUn_KI270420v1,length=2321>
##contig=<ID=chrUn_KI270424v1,length=2140>
##contig=<ID=chrUn_KI270417v1,length=2043>
##contig=<ID=chrUn_KI270422v1,length=1445>
##contig=<ID=chrUn_KI270423v1,length=981>
##contig=<ID=chrUn_KI270425v1,length=1884>
##contig=<ID=chrUn_KI270429v1,length=1361>
##contig=<ID=chrUn_KI270442v1,length=392061>
##contig=<ID=chrUn_KI270466v1,length=1233>
##contig=<ID=chrUn_KI270465v1,length=1774>
##contig=<ID=chrUn_KI270467v1,length=3920>
##contig=<ID=chrUn_KI270435v1,length=92983>
##contig=<ID=chrUn_KI270438v1,length=112505>
##contig=<ID=chrUn_KI270468v1,length=4055>
##contig=<ID=chrUn_KI270510v1,length=2415>
##contig=<ID=chrUn_KI270509v1,length=2318>
##contig=<ID=chrUn_KI270518v1,length=2186>
##contig=<ID=chrUn_KI270508v1,length=1951>
##contig=<ID=chrUn_KI270516v1,length=1300>
##contig=<ID=chrUn_KI270512v1,length=22689>
##contig=<ID=chrUn_KI270519v1,length=138126>
##contig=<ID=chrUn_KI270522v1,length=5674>
##contig=<ID=chrUn_KI270511v1,length=8127>
##contig=<ID=chrUn_KI270515v1,length=6361>
##contig=<ID=chrUn_KI270507v1,length=5353>
##contig=<ID=chrUn_KI270517v1,length=3253>
##contig=<ID=chrUn_KI270529v1,length=1899>
##contig=<ID=chrUn_KI270528v1,length=2983>
##contig=<ID=chrUn_KI270530v1,length=2168>
##contig=<ID=chrUn_KI270539v1,length=993>
##contig=<ID=chrUn_KI270538v1,length=91309>
##contig=<ID=chrUn_KI270544v1,length=1202>
##contig=<ID=chrUn_KI270548v1,length=1599>
##contig=<ID=chrUn_KI270583v1,length=1400>
##contig=<ID=chrUn_KI270587v1,length=2969>
##contig=<ID=chrUn_KI270580v1,length=1553>
##contig=<ID=chrUn_KI270581v1,length=7046>
##contig=<ID=chrUn_KI270579v1,length=31033>
##contig=<ID=chrUn_KI270589v1,length=44474>
##contig=<ID=chrUn_KI270590v1,length=4685>
##contig=<ID=chrUn_KI270584v1,length=4513>
##contig=<ID=chrUn_KI270582v1,length=6504>
##contig=<ID=chrUn_KI270588v1,length=6158>
##contig=<ID=chrUn_KI270593v1,length=3041>
##contig=<ID=chrUn_KI270591v1,length=5796>
##contig=<ID=chrUn_KI270330v1,length=1652>
##contig=<ID=chrUn_KI270329v1,length=1040>
##contig=<ID=chrUn_KI270334v1,length=1368>
##contig=<ID=chrUn_KI270333v1,length=2699>
##contig=<ID=chrUn_KI270335v1,length=1048>
##contig=<ID=chrUn_KI270338v1,length=1428>
##contig=<ID=chrUn_KI270340v1,length=1428>
##contig=<ID=chrUn_KI270336v1,length=1026>
##contig=<ID=chrUn_KI270337v1,length=1121>
##contig=<ID=chrUn_KI270363v1,length=1803>
##contig=<ID=chrUn_KI270364v1,length=2855>
##contig=<ID=chrUn_KI270362v1,length=3530>
##contig=<ID=chrUn_KI270366v1,length=8320>
##contig=<ID=chrUn_KI270378v1,length=1048>
##contig=<ID=chrUn_KI270379v1,length=1045>
##contig=<ID=chrUn_KI270389v1,length=1298>
##contig=<ID=chrUn_KI270390v1,length=2387>
##contig=<ID=chrUn_KI270387v1,length=1537>
##contig=<ID=chrUn_KI270395v1,length=1143>
##contig=<ID=chrUn_KI270396v1,length=1880>
##contig=<ID=chrUn_KI270388v1,length=1216>
##contig=<ID=chrUn_KI270394v1,length=970>
##contig=<ID=chrUn_KI270386v1,length=1788>
##contig=<ID=chrUn_KI270391v1,length=1484>
##contig=<ID=chrUn_KI270383v1,length=1750>
##contig=<ID=chrUn_KI270393v1,length=1308>
##contig=<ID=chrUn_KI270384v1,length=1658>
##contig=<ID=chrUn_KI270392v1,length=971>
##contig=<ID=chrUn_KI270381v1,length=1930>
##contig=<ID=chrUn_KI270385v1,length=990>
##contig=<ID=chrUn_KI270382v1,length=4215>
##contig=<ID=chrUn_KI270376v1,length=1136>
##contig=<ID=chrUn_KI270374v1,length=2656>
##contig=<ID=chrUn_KI270372v1,length=1650>
##contig=<ID=chrUn_KI270373v1,length=1451>
##contig=<ID=chrUn_KI270375v1,length=2378>
##contig=<ID=chrUn_KI270371v1,length=2805>
##contig=<ID=chrUn_KI270448v1,length=7992>
##contig=<ID=chrUn_KI270521v1,length=7642>
##contig=<ID=chrUn_GL000195v1,length=182896>
##contig=<ID=chrUn_GL000219v1,length=179198>
##contig=<ID=chrUn_GL000220v1,length=161802>
##contig=<ID=chrUn_GL000224v1,length=179693>
##contig=<ID=chrUn_KI270741v1,length=157432>
##contig=<ID=chrUn_GL000226v1,length=15008>
##contig=<ID=chrUn_GL000213v1,length=164239>
##contig=<ID=chrUn_KI270743v1,length=210658>
##contig=<ID=chrUn_KI270744v1,length=168472>
##contig=<ID=chrUn_KI270745v1,length=41891>
##contig=<ID=chrUn_KI270746v1,length=66486>
##contig=<ID=chrUn_KI270747v1,length=198735>
##contig=<ID=chrUn_KI270748v1,length=93321>
##contig=<ID=chrUn_KI270749v1,length=158759>
##contig=<ID=chrUn_KI270750v1,length=148850>
##contig=<ID=chrUn_KI270751v1,length=150742>
##contig=<ID=chrUn_KI270752v1,length=27745>
##contig=<ID=chrUn_KI270753v1,length=62944>
##contig=<ID=chrUn_KI270754v1,length=40191>
##contig=<ID=chrUn_KI270755v1,length=36723>
##contig=<ID=chrUn_KI270756v1,length=79590>
##contig=<ID=chrUn_KI270757v1,length=71251>
##contig=<ID=chrUn_GL000214v1,length=137718>
##contig=<ID=chrUn_KI270742v1,length=186739>
##contig=<ID=chrUn_GL000216v2,length=176608>
##contig=<ID=chrUn_GL000218v1,length=161147>
##contig=<ID=chrEBV,length=171823>
##FILTER=<ID=Duplicate_with_close_SV,Description="When multiple SVs that share breakpoints in close proximity are detected, all but one SVs are filtered.">
##FILTER=<ID=Duplicate_with_insertion,Description="Breakend SVs that are inferred to be the same as any of detected insertions">
##FILTER=<ID=Duplicate_with_close_insertion,Description="When multiple insertions in close proximity are detected, all but one insertions are filtered.">
##FILTER=<ID=SV_with_decoy,Description="SVs involving decoy contigs">
##FILTER=<ID=Too_small_size,Description="Insertions whose size is below the threshould (currently 100bp)">
##FILTER=<ID=Too_low_VAF,Description="SVs whose variant allele frequencies are inferred to be low">
##INFO=<ID=SVTYPE,Number=1,Type=String,Description="Type of structural variant">
##INFO=<ID=SVLEN,Number=1,Type=Integer,Description="Difference in length between REF and ALT alleles">
##INFO=<ID=END,Number=1,Type=Integer,Description="End position of the variant described in this record">
##INFO=<ID=MATEID,Number=1,Type=String,Description="ID of mate breakend">
##INFO=<ID=SVINSLEN,Number=1,Type=Integer,Description="Length of insertion">
##INFO=<ID=SVINSSEQ,Number=1,Type=String,Description="Sequence of insertion">
##ALT=<ID=DEL,Description="Deletion">
##ALT=<ID=INS,Description="Insertion">
##ALT=<ID=DUP,Description="Duplication">
##FORMAT=<ID=TR,Number=1,Type=Integer,Description="The number of reads around the breakpoints">
##FORMAT=<ID=VR,Number=1,Type=Integer,Description="The number of variant supporting reads determined in the validation realignment step">
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	TUMOR	CONTROL
chr1	223478939	i_98	G	<INS>	.	PASS	END=223478939;SVTYPE=INS;SVINSLEN=902;SVINSSEQ=GGGGTGGAGGAGGTGAGAGCGTGAGGAGGTGAGAGGGTGAGGAGGTGGGGGTGAGGAGGATTGGGGTGAGGAGGTTGGGAGGGTGAGGAGGTTGGGAGGACGAGGGGGTGAGAAGGGGTGAGAAGGGTGAGGAGGTGGGGAGGAGTGAGGAGGTCAGGGAGGAGGAGGTGGGGGTGAGGAGGTGCAGGAGGTGAGAAGGTGAGGGGCGGGGATGAGGGAGGATGGGGGGTGAGGAGGTTGTTGGTGAGGGGTGAGGAGGATGAAGGAGTGAGGTGGGGAGGAGGAGTGGGGAGGAGGGAGGGAGTGAGAAGGTGAGGAGGTAAGAGGGTGAGGAGGGTTGGGGGTGAGGAGGTTGGGGGTGAGGAGGTTGGGGGTGAGGGGAGGGTGAAAAAGGGTGAGGAGGTTGGGGGGTGAGGAGGTTGGGGGTGAGGAGGTTGGGAGTGAGGGGGAGAGGAATTGAGAGGGTGAGGAGGTGGGGGCTGAGGAGGTTGAGGGGGTGAGGAGGTTGGGGGATGAGGAGGTTGCGGGATGAGGAAGTTGGGGGTGAAGGGGGTGAGGAGGTGGGGGGGTGAGGAGGTGTGGGGGTGAGGAAGTTGGGGGGATGAGGAGGTTGGGGGTGAGGGGGTGAGGAGGTGAGGGGGTGAGGAGGGGTGGGGGGTAAGGAGGTTGGGGTGAGGAGGTTGGGGGTGAGGGGGAGAGGAGGTGAAAGGGTGAGGAGGTGGGGGGGAAGGTGAAAGGGTGAGGGGTGTGGGGAGAGGAGGTGAAAGGGTGAGGAGGGTGGGGGGGTGAGGAGGTGGGGGTGAGGAGGTGGGGAGGTGAGGTGGGGGTGGAGGAGGTGGGGGGTGAGGGGGTGAGGAGGTGAGGGGTGAGGAGGTTGGGGGATAAGGATGTTGGGGGGTGAG	TR:VR	92:13	27:0
chr19	37594154	r_159_0	T	[chr19:37609542[C	.	PASS	SVTYPE=BND;MATEID=r_159_1	TR:VR	74:5	29:0
chr19	37609542	r_159_1	C	[chr19:37594154[C	.	PASS	SVTYPE=BND;MATEID=r_159_0	TR:VR	74:5	29:0
chr2	1223139	i_583	T	<INS>	.	PASS	END=1223139;SVTYPE=INS;SVINSLEN=2310;SVINSSEQ=CTCCCTGTCCTGCCTGCTGCTGGAGGTGCTGGATCGCTGTAGAGGGGAAAGTGGTGCAGTGATGGAGGGCGTCTCCCTGTCCTGCCTGCTGCTGGAGGTGCTGGACCGCTGTAGAGGAAAGTGGTGCAGTGATGGAGGGCGTCTCCCTGTCCTGCCTGCTGCTGGAGGTGCTGGATCGCTGTAGAGGAAAGTGGTGCAGTGATGGAGGGCGTCTCCCTGTCCTGCCTGCTGCTGGAGGTGCTGGACCGCTGTAGAGGAAAGTGGTGCAGTGATGGAGGGCGTCTCCCTGTCCTGCCTGCTGCTGGAGGTGCTGGATCGCTGTGGAGGAAAGTGGTGCAGTGATGGAGGGCGTCTCCCTGTCCTGCCTGCTGCTGGAGGTGCTGGATCGCTGTAGAGGAAAGTGGTGCAGTGATGGAGGGCGTCTCCCTGTCCTGCCTGCTGCTGAGGTGCTGGATCGCTGTAGAGGAAAGTGGTGCAGTGATGGAGGGCGTCTCCCTGTCCTGCCTGCTGCTGGAGGTGCTGGACCGCTGTAGAGGAAAGTGGTGCAGTGATGGAGGGCGTCTCCCTGTCCTGCCTGCTGCTGGAGGGTGCTGGACCGCTGTAGAGGAAAGCGGCGCAGTGATGGAGGGCGTCTCCCTGTCCTGCCTGCTGCTGGAGGTGCTGGATCGCTGTAGAGGAAACTGGTGCAGTGATGGAGGGCGTCTCCCTGTCCTGCCTGCTGCTGGAGGTGCTGGATCGCTGTAGAGGAAAGTGGTGCAGTGATGGAGGGCGTCTCCCTGTCCTGCCTGCTGCTGGAGGTGCTGGACCGCTGTGAGGAAAGCGGCGCAGTGATGGAGGGCGTCTCCTGGTCACTGCCTGCTGCTGGAGGTGCTGGATCGCTGTAGAGGAAACCGGCGCAGTGATGGAGGGCGTCTCCCTGTCCTGCCTGCTGCTGGAGGTGCTGGATCGCTGTAGAGGAAACCGGCGCAGTGATGGAGGGCGTCTCCCTGTCCTGCCTGCTGCTGGAGGTGCTGGATCGCTGTAGAGGAAAGCGGTGCAGTGATGGAGGGCGTCTCCCTGTCCTGCCTGCTGCTGGAGGTGCTGGATCGCTGTAGAGGAAAGCGGTGCAGTGATGGAGGGCGTCTCCCTGTCCTGCCTGCTGCTGGAGGTGCTGGATCGCTGTAGAGGAAAGTGGTGCAGTGATGGAGGGCGTCTCCCTGTCCTGCCTGCTGGTGGAGGTGCTGGATCGCTGTAGAGGAAAGTGGTGCAGTGATGGAGGGCGTCTCCCTGTCCTGCCTGCTGCTGGAGGTGCTGGATCGCTGTAGAGGAAAGTGGTGCAGTGATGGAGGGCGTCTCCCTGTCCTGCCTGCTGCTGGAGGTGCTGGATCGCTGTAGAGGAAGCGAGGCGCAGTGATGGAGGGCGTCTCCCTGTCCTGCCTGCTGCTGGAGGTGCTGGATCGCTGTAGAGGAAAGTGGTGCAGTGATGGAGGGCGTCTCCCTGTCCTGCCTGCTGCTGGAGGTGCTGGATCGCTGTAGAGGAAAGTGGTGCAGTGATGGAGGGTGTCTCCCTGTCCTGCCTGCTGCTGGAGGTGCTGGATCGCTGTAGAGGAAAGTGGTGCAGTGATGGAGTGCGTCTCCCTGTCCTGCCTGCTGCTGGAGGTGCTGGATCGCTGTAGAGGAAGGCGGTGCAGTGATGGAGTGCGTCTCCCTGTCCTGCCTGCTGCTGGAGGTGCTGGATCGCTGTAGAGGAAACTGGTGGCAGTGATGGAGGGTGTCTCCCTGTCCTGCCTGCTGCTGGAGGTGCTGGATCGCTGTAGAGGAAAGTGGTGCAGTGATGGAGGGCGTCTCCCTGTCCTGCCTGCTGGTGGAGGTGCTGGATCGCTGTAGAGGAAAGTGGTGCAGTGATGGAGGGGGCATCTCCCTGTCCTGCCTGCTGCTGGAGGTGCTGGATCGCTGTAGAGGAAAGCGGCGCAGTGATGGAGGGCGTCTCCCTGTCCTGCCTGCTGCTGGAGGTGCTGGATCGCTGTAGAGGAAAGTGGCGCAGTGATGGAGGGCGTCTCCCTGTCCTGCCTGCTGCTGGAGGTGCTGGATCGCTGTAGAGGAAAGTGGTGCAGTGATGGAGGGTGTCTCCCTGTCCTGCCTGCTGCTGGAGGTGCTGGATCGCTGTAGAGGAAAGTGGTGCAGTGATGGAGTGCGTCTCCCTGTCCTGCCTGCTGCTGGAGGTGCTGGATCGCTGTAGAGGAAGGCGGTGCAGGATGGAGGGTGTCTCCTGTCCTGCTGTGGAGGTGCTGAATCGCTGTAGAGGAAAGTGGTGCAGTGATGGAGGGCGCC	TR:VR	38:3	17:0
chr3	90690463	d_1164	C	<DEL>	.	PASS	END=90690614;SVTYPE=DEL;SVLEN=-151;SVINSLEN=148;SVINSSEQ=TACAAAAAGAGTGTTTCAAAACTGCTCTATCAAAAGAAAGGTTAAACTCTGTGAGTTGAACACACGCATCACAAAGTAGTTTCCGAGAATTCTTCTGTCTTGTTTATATGAAGAATTCCCGTTTACAACGAAGGCTTTAAAGAGGGCC	TR:VR	63:5	47:1
chr4	92647307	d_1229	G	<DEL>	.	PASS	END=92647377;SVTYPE=DEL;SVLEN=-70;SVINSLEN=17;SVINSSEQ=TAATTATTGTAGCGATT	TR:VR	55:3	26:0
chr6	119381641	r_332_0	G	[chr6:120182013[A	.	PASS	SVTYPE=BND;MATEID=r_332_1	TR:VR	73:4	51:0
chr6	120182013	r_332_1	A	[chr6:119381641[A	.	PASS	SVTYPE=BND;MATEID=r_332_0	TR:VR	73:4	51:0
chr6	54813523	r_308_0	G	[chr6:146113453[G	.	PASS	SVTYPE=BND;MATEID=r_308_1	TR:VR	94:8	41:0
chr6	146113453	r_308_1	G	[chr6:54813523[G	.	PASS	SVTYPE=BND;MATEID=r_308_0	TR:VR	94:8	41:0
chr8	96763181	r_360_0	T	[chr8:96765143[A	.	PASS	SVTYPE=BND;MATEID=r_360_1	TR:VR	52:4	21:0
chr8	96765143	r_360_1	A	[chr8:96763181[A	.	PASS	SVTYPE=BND;MATEID=r_360_0	TR:VR	52:4	21:0
chr1	224273904	r_33_0	A	A[chr8:102287385[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_33_1	TR:VR	133:3	50:0
chr8	102287385	r_33_1	A	]chr1:224273904]A	.	Too_low_VAF	SVTYPE=BND;MATEID=r_33_0	TR:VR	133:3	50:0
chr1	247116050	d_313	G	<INS>	.	Too_low_VAF	END=247116266;SVTYPE=INS;SVINSLEN=218;SVINSSEQ=GCGTGTCCCTGTGGGCGGGTGACAGCAAGGTCATCACGGGGAGGGGGCGTGTCCCTGTGGGGGGGTGACAGCAAGGTCATCACGTGGGAGGGGCGCGTCCCCGTGCGGGCGGGTGACAGCAAGGTCATCACGTGGGAGGGGGCGTGTCCCTGTTGGGGGGTGACAGCAAGGTCATCACGGGGAGGGGGCGTGTCCCCTGTGGGGGGTGACAGCAAGGT	TR:VR	83:3	24:0
chr11	22332614	i_206	G	<INS>	.	Too_small_size	END=22332614;SVTYPE=INS;SVINSLEN=49;SVINSSEQ=AGTTGAAGACACTGATGCTTTCAAAGTCTTTCTGTAATTTATCATGTTA	TR:VR	29:11	13:0
chr2	241946460	r_178_0	C	C]chr2:242087674]	.	PASS	SVTYPE=BND;MATEID=r_178_1	TR:VR	40:3	41:0
chr2	242087674	r_178_1	T	T]chr2:241946460]	.	PASS	SVTYPE=BND;MATEID=r_178_0	TR:VR	40:3	41:0
chr20	28728979	r_189_0	C	]chrY:10978229]AAA	.	Too_low_VAF	SVTYPE=BND;MATEID=r_189_1;SVINSLEN=2;SVINSSEQ=AA	TR:VR	95:3	42:0
chrY	10978229	r_189_1	A	ATT[chr20:28728979[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_189_0;SVINSLEN=2;SVINSSEQ=TT	TR:VR	95:3	42:0
chr6	120469208	r_333_0	C	C]chr6:146239049]	.	PASS	SVTYPE=BND;MATEID=r_333_1	TR:VR	48:13	42:0
chr6	146239049	r_333_1	G	G]chr6:120469208]	.	PASS	SVTYPE=BND;MATEID=r_333_0	TR:VR	48:13	42:0
chr6	54825409	r_309_0	T	T]chr6:95256662]	.	PASS	SVTYPE=BND;MATEID=r_309_1	TR:VR	78:6	48:0
chr6	95256662	r_309_1	C	C]chr6:54825409]	.	PASS	SVTYPE=BND;MATEID=r_309_0	TR:VR	78:6	48:0
chr8	137476820	d_1435	T	<DEL>	.	PASS	END=137477036;SVTYPE=DEL;SVLEN=-216	TR:VR	60:9	18:0
chr1	1599928	r_0	G	<DEL>	.	PASS	END=1873503;SVTYPE=DEL;SVLEN=-273575	TR:VR	72:7	45:0
chr1	225605075	d_280	T	<DEL>	.	PASS	END=225605126;SVTYPE=DEL;SVLEN=-51	TR:VR	79:7	24:0
chr14	101782211	d_458	C	<DEL>	.	PASS	END=101782460;SVTYPE=DEL;SVLEN=-249;SVINSLEN=71;SVINSSEQ=TCTCTCCCTCTCTCTTTCTCCCCTTCCCCTCTCTCCCCCTTTCTCCCCATTCCCTCTCTCTCCCTCCCCTC	TR:VR	48:6	25:0
chr3	195485122	d_1188	A	<DEL>	.	PASS	END=195485670;SVTYPE=DEL;SVLEN=-548;SVINSLEN=52;SVINSSEQ=CAGTGAAGCTCCTGTGTGTGATATCACAGTGGTACATATAGTGAAGCTCCTA	TR:VR	49:4	22:0
chr1	161753882	d_264	G	<DEL>	.	PASS	END=161754111;SVTYPE=DEL;SVLEN=-229	TR:VR	79:10	21:0
chr1	225921253	d_281	C	<DEL>	.	PASS	END=225921425;SVTYPE=DEL;SVLEN=-172;SVINSLEN=5;SVINSSEQ=TCATA	TR:VR	77:24	17:0
chr1	76883488	r_6	G	<DEL>	.	PASS	END=76919930;SVTYPE=DEL;SVLEN=-36442	TR:VR	57:9	37:0
chr19	38424916	d_888	T	<DEL>	.	PASS	END=38425002;SVTYPE=DEL;SVLEN=-86	TR:VR	54:6	25:0
chr6	12655089	r_279	A	<DUP>	.	PASS	END=17031318;SVTYPE=DUP;SVLEN=4376229	TR:VR	93:12	37:0
chrX	112780494	d_1548	G	<DEL>	.	PASS	END=112782126;SVTYPE=DEL;SVLEN=-1632	TR:VR	36:10	25:0
chr17	62327361	r_120_0	T	T]chr20:30218545]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_120_1	TR:VR	160:4	92:0
chr20	30218545	r_120_1	T	T]chr17:62327361]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_120_0	TR:VR	160:4	92:0
chr19	38530508	r_160_0	A	[chr19:38536189[G	.	PASS	SVTYPE=BND;MATEID=r_160_1	TR:VR	70:5	18:0
chr19	38536189	r_160_1	G	[chr19:38530508[G	.	PASS	SVTYPE=BND;MATEID=r_160_0	TR:VR	70:5	18:0
chr2	26333431	r_165_0	A	]chr4:89723827]AGGAGGGTGGGAAGCAC	.	PASS	SVTYPE=BND;MATEID=r_165_1;SVINSLEN=16;SVINSSEQ=AGGAGGGTGGGAAGCA	TR:VR	117:8	39:1
chr4	89723827	r_165_1	C	CTGCTTCCCACCCTCCT[chr2:26333431[	.	PASS	SVTYPE=BND;MATEID=r_165_0;SVINSLEN=16;SVINSSEQ=TGCTTCCCACCCTCCT	TR:VR	117:8	39:1
chr2	91504995	i_672	C	<INS>	.	PASS	END=91504995;SVTYPE=INS;SVINSLEN=776;SVINSSEQ=TGTCTTGGCTTCTGGCTGTCAGGTTTGGCTGGCTGGCTGGGCTGGTGGGTGGCTTGGCTGTCTTGGCTAGCTGGCTGGCTTGGCTGTGAGCTGTGTGTATCTTGGTGTGGCTTGGCTGGCTGGGTGGCTTGGCTGGTTTGGCTGGCTGGCTGGCTGGCTGGCTTGCGTGGCTGGCTTGGCTGGCTTGGCTGGCTTGGCTGGCTTGGCAGGCTTGGCTGGCTGGCCTGGTTTGCATGGCTTGGCAGGTGGCTTGGCTGACTGGCCTGGCTTGCTGGGTGGCTTGGCTGGCTTGGCTGGCTGGGTGGCAGGCTTGACTGGCTTGCTGCTTGGCTGGCTGGCTTGGCTGGCTTGGATGGCTGGGTGGCTGGCTTGCTGGCTGGCTTGGCTGGCTTGGCTGGCTTGGCTGGCCTTTGGCTGGCTTGGCTGGCTTGGCTGCCTGGCCGGCTTGGCTGGCTTGGCTTGGCTGGCTGGCTGGGCTGGCTTGGCTGGCTTGGCTGTCTGGGCTGGCTTGGCTGGCTTGCATGGCTTGGCTGGCTGGGTGGTTTGACCGGCCTGGCTGGCCTGGGTGGCTTGGCTGGCTTGGCTTGGCTGGGTGGCTTAGCTGGCCTGGTTTGCTTGTGTGGCATGGGTGGCTTGGCTGGCTTGGTTGCCTGGCTGGCTTGGCTGCCTGGCTGGCTTGGCTGTCAGGCCTGGCTTGGCCGGCTTGGCTGGCATGCCTGGCTTGGCTGGCTTGGCTGCCTGGCTTGGCTGGCTTGGCGGGCCTGGCTGGCTAGGGT	TR:VR	192:11	98:1
chr5	179714291	d_1310	G	<DEL>	.	PASS	END=179714499;SVTYPE=DEL;SVLEN=-208;SVINSLEN=15;SVINSSEQ=CACCCGGCCTGCAGT	TR:VR	51:13	24:0
chr6	138120620	r_334	T	<DEL>	.	PASS	END=141558402;SVTYPE=DEL;SVLEN=-3437782	TR:VR	39:9	42:0
chr1	117164487	d_37	C	<DEL>	.	PASS	END=117164653;SVTYPE=DEL;SVLEN=-166	TR:VR	41:7	18:0
chr19	24335308	d_868	T	<INS>	.	PASS	END=24335285;SVTYPE=INS;SVINSLEN=279;SVINSSEQ=GAGAAACTGCTTTGTGATGAGTGCATTCATCTCACAGGGTGAAAACTTTCTTTAATTTAGCGCTTTGACACCAGTGATTTTGTACAATCTGAGAACAGATATTTGGGAGCACTTGGAGGCCTATGGTGAATAATGAATCTGCTTTGAGATTTGTGTATTCTTCTCAATGAGTTAAACTTTGTGTTGATTGAGCAGTGTGGAAACACTGTTTTTTTAGAATATGTGAAGGGATATTGGGAGCACTTTGACGCCTATGTCAAAAAAGGAAATATCTTCAGA	TR:VR	33:5	27:0
chr4_GL000008v2_random	134274	r_265_0	G	G[chr8:4101704[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_265_1	TR:VR	103:3	67:0
chr8	4101704	r_265_1	T	]chr4_GL000008v2_random:134274]T	.	Too_low_VAF	SVTYPE=BND;MATEID=r_265_0	TR:VR	103:3	67:0
chr7	54959571	r_343	T	<DEL>	.	PASS	END=55056227;SVTYPE=DEL;SVLEN=-96656;SVINSLEN=43;SVINSSEQ=AAAATATACATAAAATATATATTTTATGTATATTACATATACA	TR:VR	58:8	46:0
chr6	146172790	r_335	A	<DEL>	.	PASS	END=146266138;SVTYPE=DEL;SVLEN=-93348	TR:VR	47:3	30:0
chr8	140609528	r_368	C	<DEL>	.	PASS	END=140636249;SVTYPE=DEL;SVLEN=-26721	TR:VR	99:17	36:0
chr14	104301005	i_289	C	<INS>	.	PASS	END=104301014;SVTYPE=INS;SVINSLEN=692;SVINSSEQ=CACCACCACCGCCGCTGCCGCCACCACCACCACCATCACCACCACCACCACCGCCGCCGCCGCCACCACCGCCACCGCTCACTCTGTCACCGTCTCACTCTCTCTCTGTCTGTCTCTCCACCGTCTCACAATGTCTGTCTCTGTCTGTCTGTCTGCGTCTCTCTGTCTGTCTCTATCTCTGTCTGTCTCTGTCTTTCCGTCTCACTGTCTGTGTCTCTGTCTCTCGATCTCTGTCTCTGTCTTATATATCCGTCTGCCTGCCACCGTCTCTTTCTTTCTGTCATTCATATATACTTTCATCACTTTCATTCATACATACATATGTATACATACATACATACATACATACATACATCATACATACCACCACCACAGGCACGCATACATGTCTACCACCACCACCATCTTTCCGCCGCCTGCACACCACCAACATATGCATACCACCACCATATATACATATACATATATACATACCACCACCGCCTTATACACCATGGCCGTGTGTGACCACCATCATACACCACCTACACCATACATACATACATATACATACATACCTACACCACCATATATACCTACACTACCACATGCACATACCATATACATACTTATATATATATATATATGTATGTATATATATATATATACATATGCACAGCGCGTGCATGCGCGCGCGCCTGCCTGCCTGGCCT	TR:VR	28:4	13:0
chr15	30849379	r_89	G	<DEL>	.	PASS	END=30902937;SVTYPE=DEL;SVLEN=-53558	TR:VR	53:4	41:0
chr2	28818305	r_166	A	<DEL>	.	PASS	END=28911992;SVTYPE=DEL;SVLEN=-93687	TR:VR	63:5	49:0
chr7	151468762	d_1389	A	<DEL>	.	PASS	END=151469095;SVTYPE=DEL;SVLEN=-333	TR:VR	34:6	22:0
chr7	56367793	d_1371	T	<DEL>	.	PASS	END=56367938;SVTYPE=DEL;SVLEN=-145	TR:VR	109:6	54:1
chr1	171348107	r_17	A	<DUP>	.	PASS	END=171532511;SVTYPE=DUP;SVLEN=184404	TR:VR	177:10	36:0
chr3	9464051	d_1153	C	<DEL>	.	PASS	END=9465597;SVTYPE=DEL;SVLEN=-1546	TR:VR	46:10	18:0
chr6	151546720	r_336	T	<DUP>	.	PASS	END=153605016;SVTYPE=DUP;SVLEN=2058296	TR:VR	47:8	38:0
chr7	15338656	d_1363	G	<DEL>	.	PASS	END=15338939;SVTYPE=DEL;SVLEN=-283;SVINSLEN=17;SVINSSEQ=ATAAATTCTCAATTTAT	TR:VR	51:4	24:0
chrX	36426921	r_379	A	<DEL>	.	PASS	END=37950220;SVTYPE=DEL;SVLEN=-1523299	TR:VR	78:8	47:0
chr14	105931542	i_290	G	<INS>	.	PASS	END=105931542;SVTYPE=INS;SVINSLEN=313;SVINSSEQ=AAAAGTAGCCAGAAATGACATTCACATGAACGGGCACATACAGGGAGAAAACACGGTAACGTAATTAGAATAGTCAGAGAAAAGTAGCCAGAAATGACATTCACATGAACGGGCACATACAGGAGAAAACACGGTAACGTAATTAGAATAGTCAGAGAAAAAGTAGCCAGAAATGACATTCACATGAACGGGCACATATAGGAGAAACCATGGTAACGTAATTAGAATAGTCAGAGAAAGTAGCCAGAAATGACATTCACATGAACGGGCACATACAGGAAAACACGGTAATGTAATTAGAATAGTCAGAGAA	TR:VR	26:8	16:0
chr20	28799104	i_717	T	<INS>	.	Too_low_VAF	END=28799105;SVTYPE=INS;SVINSLEN=412;SVINSSEQ=CCTGGTGTGCCATTTTTTAAGCCTGTTGAAAAAGTGCAGTATTAGTGTGGGAGTGACCCGATTTTCCAGGTGCCGTCTGTCATCCCTTTATTTGACTAGGAAAGGGAACTCCCTGACCACTTCCACTTCCCATGTGAGGAAATGCCTCGCTCTGCTTCAGCCCATGCATGGCACCCTGCACCCAGTATCCTGTGCCCACAGTCTGGCACTCCCTAGTGAGATGAACCTGGTATCTCAGATGGAAATGAAGAAATCACCCATCTTCTGCTTCACTCATGATGGGAACTGTAGAACAGAGCTGTTCCCATTTGGCCATCTTGACTGCTGCCTCATTTGCCAGTTTGCTTCTGTGTAGTTATTATGTGAAAATATTTCCTTTTCCACCATAGGCTGCAAAGGGCTCCAAATATCC	TR:VR	135:3	107:0
chr6	15286821	r_280_0	C	C]chr6:15296867]	.	PASS	SVTYPE=BND;MATEID=r_280_1	TR:VR	84:9	30:0
chr6	15296867	r_280_1	T	T]chr6:15286821]	.	PASS	SVTYPE=BND;MATEID=r_280_0	TR:VR	84:9	30:0
chr7	154335721	i_1074	G	<INS>	.	PASS	END=154335721;SVTYPE=INS;SVINSLEN=936;SVINSSEQ=ATGCGCTGTGTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGATTTTGTCTCATTTTATTGTTATTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTGATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATTA	TR:VR	33:3	21:0
chr8	140655250	r_369	A	<DEL>	.	PASS	END=140904012;SVTYPE=DEL;SVLEN=-248762	TR:VR	100:6	48:0
chr12	40488075	d_419	C	<INS>	.	PASS	END=40488048;SVTYPE=INS;SVINSLEN=93;SVINSSEQ=AACTAGACTTTCATCTGGAGTCACAGGGACAATTGGACCATCAGCTGAAGAGACAGGGGCAACTGGACTATCAGCAGAAGTGACAGGGACAAC	TR:VR	26:17	19:0
chr18	62449187	d_833	T	<DEL>	.	PASS	END=62456178;SVTYPE=DEL;SVLEN=-6991	TR:VR	49:6	23:0
chr19	40772017	r_162_0	T	T]chr19:40775120]	.	PASS	SVTYPE=BND;MATEID=r_162_1	TR:VR	76:5	23:0
chr19	40775120	r_162_1	T	T]chr19:40772017]	.	PASS	SVTYPE=BND;MATEID=r_162_0	TR:VR	76:5	23:0
chr3	96462480	r_218_0	C	[chr3:96465449[T	.	PASS	SVTYPE=BND;MATEID=r_218_1	TR:VR	43:3	25:0
chr3	96465449	r_218_1	T	[chr3:96462480[T	.	PASS	SVTYPE=BND;MATEID=r_218_0	TR:VR	43:3	25:0
chr6	15338191	r_281_0	C	[chr6:15369170[GAAAT	.	PASS	SVTYPE=BND;MATEID=r_281_1;SVINSLEN=4;SVINSSEQ=GAAA	TR:VR	96:5	38:0
chr6	15369170	r_281_1	T	[chr6:15338191[TTTCT	.	PASS	SVTYPE=BND;MATEID=r_281_0;SVINSLEN=4;SVINSSEQ=TTTC	TR:VR	96:5	38:0
chrX	36955978	d_1542	G	<DEL>	.	Too_small_size	END=36956022;SVTYPE=DEL;SVLEN=-44	TR:VR	37:3	25:0
chr1	231959087	r_34	A	<DUP>	.	Too_low_VAF	END=232326538;SVTYPE=DUP;SVLEN=367451;SVINSLEN=1;SVINSSEQ=T	TR:VR	176:5	46:0
chr21	9012671	i_773	C	<INS>	.	PASS	END=9012671;SVTYPE=INS;SVINSLEN=249;SVINSSEQ=AAATAGAAGAAATAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAATAACAATAAAATGAGATAAAATCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	TR:VR	78:6	77:0
chr4	279352	r_229_0	A	A]chr4:281616]	.	PASS	SVTYPE=BND;MATEID=r_229_1	TR:VR	50:24	22:0
chr4	281616	r_229_1	C	C]chr4:279352]	.	PASS	SVTYPE=BND;MATEID=r_229_0	TR:VR	50:24	22:0
chr12	50942068	r_60_0	A	[chr22:24340274[A	.	PASS	SVTYPE=BND;MATEID=r_60_1	TR:VR	78:8	36:0
chr22	24340274	r_60_1	A	[chr12:50942068[A	.	PASS	SVTYPE=BND;MATEID=r_60_0	TR:VR	78:8	36:0
chr19	46105148	i_555	T	<INS>	.	Too_small_size	END=46105149;SVTYPE=INS;SVINSLEN=48;SVINSSEQ=TTTTTTTTGGTTTGTTTGTTTTGTTTTTTGTTTGTTTGTTTTGTATTT	TR:VR	36:5	26:0
chr21	9801345	r_200_0	G	GAAGGGTTGGTGTAGGAAAGGGTGGTGT[chrUn_KI270754v1:3418[	.	PASS	SVTYPE=BND;MATEID=r_200_1;SVINSLEN=27;SVINSSEQ=AAGGGTTGGTGTAGGAAAGGGTGGTGT	TR:VR	71:4	64:1
chrUn_KI270754v1	3418	r_200_1	A	]chr21:9801345]ACACCACCCTTTCCTACACCAACCCTTA	.	PASS	SVTYPE=BND;MATEID=r_200_0;SVINSLEN=27;SVINSSEQ=ACACCACCCTTTCCTACACCAACCCTT	TR:VR	71:4	64:1
chr4	281034	r_230	C	<DUP>	.	PASS	END=5499250;SVTYPE=DUP;SVLEN=5218216	TR:VR	72:24	43:0
chr1	143242897	d_237	A	<DEL>	.	Too_low_VAF	END=143243521;SVTYPE=DEL;SVLEN=-624	TR:VR	912:3	628:1
chr10	118823997	r_51_0	G	]chr22:41643068]T	.	PASS	SVTYPE=BND;MATEID=r_51_1	TR:VR	84:6	51:0
chr22	41643068	r_51_1	T	T[chr10:118823997[	.	PASS	SVTYPE=BND;MATEID=r_51_0	TR:VR	84:6	51:0
chr12	51102884	r_61_0	T	T]chr22:24514013]	.	PASS	SVTYPE=BND;MATEID=r_61_1	TR:VR	58:4	43:0
chr22	24514013	r_61_1	A	A]chr12:51102884]	.	PASS	SVTYPE=BND;MATEID=r_61_0	TR:VR	58:4	43:0
chr16	46563685	i_374	T	<INS>	.	PASS	END=46563685;SVTYPE=INS;SVINSLEN=84;SVINSSEQ=AAAAGTATCAATAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAATAACAATAAAATGAGATAAAATCTACTAAAAAAAAAAAA	TR:VR	60:13	20:0
chr20	28869662	i_720	A	<INS>	.	Too_low_VAF	END=28869663;SVTYPE=INS;SVINSLEN=172;SVINSSEQ=GAGAGTTTCAAAACTGCTCAATCAAAAGAAAGGTTTAACTCTCTGGGATGAATGCACACATCTCAAAAAGTTTCTCAGATTGCTTCTGTCTAGATTTTATGTGAAGATTTTTCCTTTTATACCATAGGCTGCAAAGCGCTCCAAATGTCCAATTGCAGATTCTACAAAAAGA	TR:VR	111:3	73:0
chr4	10399997	r_239	G	<DEL>	.	PASS	END=10400730;SVTYPE=DEL;SVLEN=-733	TR:VR	36:15	23:0
chr4	28806373	d_1207	T	<DEL>	.	PASS	END=28806451;SVTYPE=DEL;SVLEN=-78	TR:VR	32:10	26:0
chr10	118981514	r_52	G	<DEL>	.	PASS	END=119346449;SVTYPE=DEL;SVLEN=-364935	TR:VR	53:7	33:0
chr14_GL000225v1_random	66639	d_508	G	<INS>	.	Too_low_VAF	END=66686;SVTYPE=INS;SVINSLEN=61;SVINSSEQ=ATCACCTAGGTGATGTAACTCTTGTCTAGGCTCTGCCCTACAGAGAGGGCCTACAGTGGCA	TR:VR	706:4	655:1
chr16	46625435	r_108	C	<DUP>	.	PASS	END=46664185;SVTYPE=DUP;SVLEN=38750	TR:VR	119:6	42:0
chr18	7404741	r_125	C	<DUP>	.	PASS	END=13758264;SVTYPE=DUP;SVLEN=6353523	TR:VR	60:6	42:0
chr4	34038849	r_240_0	A	[chr8:125931117[T	.	PASS	SVTYPE=BND;MATEID=r_240_1	TR:VR	63:4	56:0
chr8	125931117	r_240_1	T	[chr4:34038849[T	.	PASS	SVTYPE=BND;MATEID=r_240_0	TR:VR	63:4	56:0
chr8	141873847	i_1140	A	<INS>	.	PASS	END=141873847;SVTYPE=INS;SVINSLEN=2153;SVINSSEQ=TAAGGTGAGAGTGATGGGCATGGTGTGTGTAGGTGCAGGGTGGTGGTGGTGTCTCACACTTGTGGGATAGGTAAGGGTGATGGGAAGGGGTGTGTAGTGTGAAGGTGGCGATTCAACTAAAGGAAAAGGGTGGCAATCTGCTTGTGGCTGTAGCCCAGGGTAGTCACGGTAGCATGATGATTGGGCAGGATCAGAGGGGATAAGGGAACTGGGCAGGGGAGTGTGGCATCGGGTGGCAGGGAGTATTGTGTAGGCTTGTACCTGAATTGGGGGTGTAGGAGAGGGCAGACATGGCAATCCGTCTCTGGACATCAGTGAGGCTGATGGGAACTGGCCCTAGAAGAAGGGTGGAGACGGCAGCCTCTATATGGCCTAGAGGTGACTAGGTGTTCCCGCCCACCTGTGAAAGGCGCCAGTGGGTGGGTGACAGGCATGGGCTAGGGGTCTTCCGAGGTGATCAGGAGAGTGTCAGTGTTAATGGACACAGGGGAAAGATATGGGATAGTGTCAAGCTGAGAGTGATGGGGCAGGGGAAGTTGCAGCTGGGTCTGGGATGATGGAACTGTGGTAGGGGAGCCTGCATAGTCACAGGGCCACATCAGGGTGAGCACCAGATGGGACATGGTGTAGGGAGTGCTGTGGATGCAGGCACAGTGTGTAGGTGAGAGTGATGGGAATGTAGTGTGTAGGAGGAGGTTCTGGAGGTGCCTGGGCACAGTGTATGTGTAAGTGTGTATGGGAACTGTGTGGGTTGTCTCCTGTGGGAGGCAAGGAATGGGCAACTTGTGTGTATTATTGGTGAGGGTGATGGGAATTAAGTGTGTGGTAGGAGGGCTGGCATTAATTTTGGGCATGGTGTATAGGTGAGGGTGATGGGAACTGTGTGTAGGGGAGAATGGTGACGGGTACAGTGTGTAGGGGAGGGTGGATGGGAACTGTGTGTAGGGAGGGTGGTGGACTGGGCTGGGGTATAGGTGAGGGAAGAATGCTCTCCTGTGTGTAGGGGAGGGAAGGGATGGGCACAGTGTAGTTGACCTTTAGATGGGCACAGTGTATAGGTGAGGGTGATGGGAACTGTGTGTAGGGGAGGAGTGGTGACGGGGAATTGTGTATAGGTGAGGTAGATGTGAACCGTGTGTAGGGGAGGGAGGTGATGGGCACAGGGGAAGCTGAGAGTGATGGGTACAGTGTGGGTAGGTGAGGGTGGATGGGGAACTGTGTGTAGGGAGGTAGTGATGGGTGTGTAGGGAGGATGGAGGGAACTGTGTGTAGGGGGAGGGTGGTGATGGGCACAGTGTGTAGGAAAGAGGGTGATGGGAACTGTGTGTACTGGGGGGAGGGAGGTGATGGGTACAGTGTGTGTAGTCTGAGAGTGATGGGCACAGTGTGTAGGGGAAGGTGATGTGAACTGTGTGTAGGGGAGGGTAGGTGACAGGCTGCTAGGTGAGGTGATGGGAACTGAGTGTAGGATGGGTATGGAGGCACAGTGTGTAGGTGAGGGTGATGGGAACTGTGTGTAGGGGAGGGTGTGAGATGATGACGGTGTATAGGTGAGTAAGATGGGAACTGTGTGTAGGGGAGGGAGGTGATGGGCACAGTGTGTAGCTGAGAGTGATGGGCACAGTGTGTAGGTGAGGGTGATGGGAACTGAAAGTGTGTAGGGGGAGGGTAGTGATGGGCACGGTGTATAGGTGAGGGGTGATGGGAACTGTGTGTAGGGGAGGGTGGTGATGGACACACAGTGGTAGGTGCAGAGTGATAAGGGTCAGGACATGGGAACTGTGTGATAGGGGAACTGGGTGGGGATTGAGGCATGGGTGTATAGGTGGAGGGTGATGGGAACTGTGTGTAGGGGAGGGTGGTGATGGGGTACAGTGTGTAGGTGAGGGTGATGGGAACTGTGTGTAGGGGAGGGGGTGATGGGCACAGTGTGTAGCTGAGGTGATGGGCACAGTGTGTAGGTGAGGGTGATGGGAACTGTGTGTGTAGGGGAGGGTGAGTGACAGGTAGTGTATAGGTGGGGGTGATGGGAACTGTGTGTATGGGGAGGGTGGTGACGGGGCATGGGTGTATAGGTGAGGGTGATGGGAACTGTGTGTAGGGAGGGAGGTGATGGGCACAGTGTGTAGCTGAGAGTGATGGGCACAGTGTGT	TR:VR	63:9	25:0
chr12	53654261	r_62_0	G	[chr12:54037478[A	.	PASS	SVTYPE=BND;MATEID=r_62_1	TR:VR	66:12	40:0
chr12	54037478	r_62_1	A	[chr12:53654261[A	.	PASS	SVTYPE=BND;MATEID=r_62_0	TR:VR	66:12	40:0
chr18	7407996	r_126_0	A	AAGCTTTGAAACTAGGTATC]chr18:7449549]	.	PASS	SVTYPE=BND;MATEID=r_126_1;SVINSLEN=19;SVINSSEQ=AGCTTTGAAACTAGGTATC	TR:VR	69:5	42:0
chr18	7449549	r_126_1	A	AGATACCTAGTTTCAAAGCT]chr18:7407996]	.	PASS	SVTYPE=BND;MATEID=r_126_0;SVINSLEN=19;SVINSSEQ=GATACCTAGTTTCAAAGCT	TR:VR	69:5	42:0
chr4	109317980	r_257_0	A	ACAAGGAACCCCACAG]chr5:140402408]	.	PASS	SVTYPE=BND;MATEID=r_257_1;SVINSLEN=15;SVINSSEQ=CAAGGAACCCCACAG	TR:VR	71:5	37:0
chr5	140402408	r_257_1	G	GCTGTGGGGTTCCTTG]chr4:109317980]	.	PASS	SVTYPE=BND;MATEID=r_257_0;SVINSLEN=15;SVINSSEQ=CTGTGGGGTTCCTTG	TR:VR	71:5	37:0
chr1	235617309	d_286	C	<DEL>	.	Too_low_VAF	END=235625375;SVTYPE=DEL;SVLEN=-8066	TR:VR	120:5	27:0
chr10	119518730	r_53_0	G	G[chr22:41473809[	.	PASS	SVTYPE=BND;MATEID=r_53_1	TR:VR	61:5	39:0
chr22	41473809	r_53_1	G	]chr10:119518730]G	.	PASS	SVTYPE=BND;MATEID=r_53_0	TR:VR	61:5	39:0
chr12	53654557	r_63_0	A	A]chr17:1989979]	.	PASS	SVTYPE=BND;MATEID=r_63_1	TR:VR	61:13	44:0
chr17	1989979	r_63_1	C	C]chr12:53654557]	.	PASS	SVTYPE=BND;MATEID=r_63_0	TR:VR	61:13	44:0
chr16	53850101	r_109_0	G	G]chr16:55289017]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_109_1	TR:VR	111:3	42:0
chr16	55289017	r_109_1	C	C]chr16:53850101]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_109_0	TR:VR	111:3	42:0
chr19	29010059	i_539	A	<INS>	.	PASS	END=29010070;SVTYPE=INS;SVINSLEN=538;SVINSSEQ=GTGTCACATATATACACACATACACACCCATCTAACACACACACCCCTAACATACACCTGACTCACACACACACACCTAACACACATATATACACATGCACACATACACCCACCTAACACACACACCCCTAACACACATACACACATATACACACACCCACCTAACACACACACACCCAACACACATATATGCACATACACACATACACCCACCTGACTCACACACACACACCTAACACACATATACACATACACGCATACACCCACCTAACACACACATACCTAACACACATATACACACATTCACACATACACCCACCTGACTCACACACACTCCTAACACACATATAGATACATACACACATACACCCACCTAACTTACACACCCCTAACACACATATATACACATACACCTGACTCTCACACACACCTGACTCACACACACACACATACACACAACACACATATATACACATACACACACACCCACCTGACTCACACACACACACTTCACACACATATATACACATACACACAT	TR:VR	49:5	22:0
chrX	125563094	i_1248	T	<INS>	.	PASS	END=125563094;SVTYPE=INS;SVINSLEN=232;SVINSSEQ=CACTGCAAGCCTCCCAGGTTCAAGCGATTCTCCCGCCTCAGCTTCCAGAGTAGTTGGGACTACAGGCACACGCCACCACACCCAGCTAATTTTTATGTGTTTAATAGAGATGGGGTCTCACTATGTTGGCCAGGATGGTCTTGATCTTTTGACCTCGTGATCTGCCCGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTCCAGGCACCGCGCCCAGCCAAGGAGGCTTT	TR:VR	35:3	17:0
chr1	177726559	r_18_0	A	A]chr1:181740050]	.	PASS	SVTYPE=BND;MATEID=r_18_1	TR:VR	113:30	50:0
chr1	181740050	r_18_1	C	C]chr1:177726559]	.	PASS	SVTYPE=BND;MATEID=r_18_0	TR:VR	113:30	50:0
chr14_GL000225v1_random	127552	d_579	G	<DEL>	.	Too_low_VAF	END=127702;SVTYPE=DEL;SVLEN=-150;SVINSLEN=13;SVINSSEQ=GTATTGTGAGAGA	TR:VR	819:7	777:1
chr1	177730141	r_19_0	A	]chr20:21597617]T	.	PASS	SVTYPE=BND;MATEID=r_19_1	TR:VR	87:24	55:0
chr20	21597617	r_19_1	T	T[chr1:177730141[	.	PASS	SVTYPE=BND;MATEID=r_19_0	TR:VR	87:24	55:0
chr1	236206615	i_105	A	<INS>	.	PASS	END=236206616;SVTYPE=INS;SVINSLEN=128;SVINSSEQ=CATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAATAACAATAAAATGAGATAAAATCTACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	TR:VR	70:5	22:0
chr17	83215379	i_465	C	<INS>	.	PASS	END=83215379;SVTYPE=INS;SVINSLEN=94;SVINSSEQ=GGCACCCGCGTGGTGTCGCAGTTTCCACACCGTGAGCTGCCGAGACGGCACCGCGTGGTGTGCCGCAGTTTCACACCGTGAGCTGCCGAGACGG	TR:VR	25:4	15:0
chr18	7421416	r_127	T	<DUP>	.	PASS	END=7445308;SVTYPE=DUP;SVLEN=23892	TR:VR	79:5	37:0
chr19	29348835	r_136_0	A	[chr19:29353246[A	.	PASS	SVTYPE=BND;MATEID=r_136_1	TR:VR	115:34	32:0
chr19	29353246	r_136_1	A	[chr19:29348835[A	.	PASS	SVTYPE=BND;MATEID=r_136_0	TR:VR	115:34	32:0
chr19	52544789	r_164	T	<DEL>	.	PASS	END=52595812;SVTYPE=DEL;SVLEN=-51023	TR:VR	51:3	34:0
chr2	36183849	i_619	A	<INS>	.	PASS	END=36183849;SVTYPE=INS;SVINSLEN=743;SVINSSEQ=TATATCTATATCTATCTATAGATACATGGGTATATATCTATATCTATCTATAGATACATGGGTATATATCTATATCTATCTATAGATACATGGGTATATATCTATATCTATCTATAGATACATGGGTATATATCTATATCTATCTATAGATACATGGGTATATATCTATATCTATCTATAGATACATGGGTATATATCTATATCTATCTATAGATACATGGGTATATATCTATATCTATCTATAGATACATGGGTATATATCTATATCTATCTATAGATACATGGGTATATATCTATATCTATCTATAGATACATGGGTATATATCTATATCTATCTATAGATACATGGGTATATATCTATATCTATCTATAGATACATGGGTATATATCTATATCTATCTATAGATACATGGGTATATATCTATATCTATCTATAGATACATGGGTATATATCTATATCTATCTATAGATACATGGGTATATATCTATATCTATCTATAGATACATGGGTATATATCTATATCTATCTATAGATACATGGGTATATATCTATATCTATCTATAGATACATGGGTATATATCTATATCTATCTATAGATACATGGGTATATATCTATATCTATCTATAGATACATGGGTATATATCTATATCTATCTATAGATACATGGGTATATATCTATATCTATCTATAGATACATGGGTATATATCTATATCTATCTATAGATACATGGGTATATATCT	TR:VR	51:3	15:0
chr11	55242893	r_54_0	G	[chr11:55246084[AGAATCTGCAAGTGGACATTTGGAGCGCTTTGAGGCCTATGGTGAAAAAGGAAATATCTTCACATAAAAACTAGACAGAAGCATTCTCAGAAACTTCTTTGTGATGTTTGCATTCAACCCACAGAA	.	PASS	SVTYPE=BND;MATEID=r_54_1;SVINSLEN=125;SVINSSEQ=AGAATCTGCAAGTGGACATTTGGAGCGCTTTGAGGCCTATGGTGAAAAAGGAAATATCTTCACATAAAAACTAGACAGAAGCATTCTCAGAAACTTCTTTGTGATGTTTGCATTCAACCCACAGA	TR:VR	46:3	34:1
chr11	55246084	r_54_1	A	[chr11:55242893[TCTGTGGGTTGAATGCAAACATCACAAAGAAGTTTCTGAGAATGCTTCTGTCTAGTTTTTATGTGAAGATATTTCCTTTTTCACCATAGGCCTCAAAGCGCTCCAAATGTCCACTTGCAGATTCTA	.	PASS	SVTYPE=BND;MATEID=r_54_0;SVINSLEN=125;SVINSSEQ=TCTGTGGGTTGAATGCAAACATCACAAAGAAGTTTCTGAGAATGCTTCTGTCTAGTTTTTATGTGAAGATATTTCCTTTTTCACCATAGGCCTCAAAGCGCTCCAAATGTCCACTTGCAGATTCT	TR:VR	46:3	34:1
chr12	66207772	r_64_0	T	T]chr4:76918950]	.	PASS	SVTYPE=BND;MATEID=r_64_1	TR:VR	83:5	50:1
chr4	76918950	r_64_1	A	A]chr12:66207772]	.	PASS	SVTYPE=BND;MATEID=r_64_0	TR:VR	83:5	50:1
chr14_GL000225v1_random	70356	d_513	T	<DEL>	.	Too_low_VAF	END=70708;SVTYPE=DEL;SVLEN=-352;SVINSLEN=11;SVINSSEQ=ACACTCTGCCT	TR:VR	733:5	699:0
chr16	58018120	r_110	C	<DUP>	.	Too_low_VAF	END=58172242;SVTYPE=DUP;SVLEN=154122	TR:VR	112:5	52:0
chr22	10736341	r_206_0	T	[chrY:11308271[C	.	Too_low_VAF	SVTYPE=BND;MATEID=r_206_1	TR:VR	575:4	562:0
chrY	11308271	r_206_1	C	[chr22:10736341[C	.	Too_low_VAF	SVTYPE=BND;MATEID=r_206_0	TR:VR	575:4	562:0
chr5	28599879	r_267	A	<DEL>	.	PASS	END=28689835;SVTYPE=DEL;SVLEN=-89956	TR:VR	48:9	35:0
chr8	143661391	i_1142	G	<INS>	.	PASS	END=143661401;SVTYPE=INS;SVINSLEN=228;SVINSSEQ=CAATTTTCATTTCATATTTTCAAAAAACTGGGGTCTTGCTTTGTTGCTGCCTTCCTGCTCCTTCACTCTCGTCTTCGGGGCGCTGTGGCCCTGTTTGCTGGTGCCTTTCCTGCTCCTTCTTCACTCGCCTTTCGGGGCGCTGTGGCCCTGTTTGCTGGTGCCTTCCTGCTCCTTCTTCACTTGCCTTCGGGGCACTGTGGGTCTGTTTGCTGGTGCCCTTCCTGCCTC	TR:VR	29:5	29:0
chrUn_GL000220v1	117514	d_1480	G	<INS>	.	Too_low_VAF	END=117584;SVTYPE=INS;SVINSLEN=75;SVINSSEQ=GGACAGTGCCAGGTGGGAGCTTGACTGGGGCGGTACACCTGCAAACGTGTAATGCGTAAAGGTGTCCCGTTGCGT	TR:VR	848:4	781:1
chr15	79118599	r_93	T	<DEL>	.	PASS	END=79138100;SVTYPE=DEL;SVLEN=-19501	TR:VR	54:4	37:0
chr2	90383308	d_966	C	<INS>	.	Too_small_size;Too_low_VAF	END=90383328;SVTYPE=INS;SVINSLEN=20;SVINSSEQ=ATCGAAAGGAATCACATGGA	TR:VR	456:3	208:1
chr6	61429373	r_311	T	<DEL>	.	PASS	END=64290550;SVTYPE=DEL;SVLEN=-2861177;SVINSLEN=131;SVINSSEQ=CTTTTGAGAGAGCAGTTTAGTAACACTCTTTTTGTAGAATCTGCAAGTGGATATTTTGTTTCCTTTGAGGCCTTCGTTGGAAAACAAAATATCTTCACTTAAAAACTAGACAGAAGCATTCTCAGAAACTA	TR:VR	75:10	50:0
chrX	138618848	d_1551	T	<DEL>	.	PASS	END=138618927;SVTYPE=DEL;SVLEN=-79	TR:VR	39:10	24:0
chrX	62631112	i_1239	A	<INS>	.	PASS	END=62631112;SVTYPE=INS;SVINSLEN=460;SVINSSEQ=ATTGAAACTTTCTTTTGATTGACCAGTTTGGAAACACTCTTTATGTAGCATCTGCAAGTGGCTATCTGGAGCTTTTTGAGGCCTATGTTGGAAAAGGAAATATCTTCACATAAAAACTACACAGAAGCATTCTGAGAAACTTCTTTTTGTTGTGTTTATTCACCACAGAGAGTTGAACATTTCTTTTGATTGAACAGTTTTGAAACATACTTTTTGTAGAATCTGCAAGTGGATATTTGAGCACTTTGAGGCCTATTCTGCAAGTGGATATTTGAGCACTTTGAGGCCTATTATGGAAGAGGAATTACCTTCAGTTTGGAAACACTCCTTTTGTAGAATCTACAAGTGGATATTTGGAGCTGTTTCAGGCCTATGGTGGTTAAAGAAGTATCTTCACATAAAACCTACACAGAAGCATACTGAGAAAGTGCTTTGCGATGTGTGCGTTCATCTCACAGTG	TR:VR	37:8	17:0
chr14_GL000225v1_random	71552	d_516	G	<DEL>	.	Too_low_VAF	END=71649;SVTYPE=DEL;SVLEN=-97	TR:VR	700:3	648:0
chr16	71406520	d_766	T	<DEL>	.	PASS	END=71406732;SVTYPE=DEL;SVLEN=-212	TR:VR	49:14	25:0
chr18	7688946	r_128	A	<DEL>	.	Too_low_VAF	END=7761208;SVTYPE=DEL;SVLEN=-72262	TR:VR	74:3	39:0
chr3	195782797	i_870	G	<INS>	.	PASS	END=195782797;SVTYPE=INS;SVINSLEN=145;SVINSSEQ=GGGTGGTGTCCCCTGTGGATAATGAGGAAGCATCGGTGACATGAAGAGCGGTGGCGTGACCTGTGGATACTGAGGAAGCGTCGGTGACAAGAAGAGAGGTGGCGTGACCTGTGGATACTGAGGAAGCGTCGGTGACAAGAAGATG	TR:VR	39:3	20:0
chr6	61873216	r_312	A	<DUP>	.	PASS	END=65305351;SVTYPE=DUP;SVLEN=3432135;SVINSLEN=1;SVINSSEQ=T	TR:VR	86:19	37:0
chrX	62644034	d_1545	T	<INS>	.	PASS	END=62644096;SVTYPE=INS;SVINSLEN=141;SVINSSEQ=TGAACGTTTCTATCGATAGAATAGTTTTGAAAGGCACTTTTTGTAGAATCTGCAAGTGGATATTTGGAGCTCATCGAGGCCTATGGTGGAAAAGAAAATATCTTCACATAAAAACTAGACAGAAGCATTCTCTGAAACTTC	TR:VR	30:6	18:0
chr11	63922985	r_55	G	<DUP>	.	PASS	END=63937749;SVTYPE=DUP;SVLEN=14764	TR:VR	57:11	31:0
chr12	79602102	r_65	G	<DEL>	.	PASS	END=79639672;SVTYPE=DEL;SVLEN=-37570	TR:VR	44:3	30:0
chr19	29702118	r_138_0	G	[chr19:29703446[T	.	PASS	SVTYPE=BND;MATEID=r_138_1	TR:VR	318:208	21:0
chr19	29703446	r_138_1	T	[chr19:29702118[T	.	PASS	SVTYPE=BND;MATEID=r_138_0	TR:VR	318:208	21:0
chr2	90386059	d_969	A	<DEL>	.	Too_low_VAF	END=90386224;SVTYPE=DEL;SVLEN=-165;SVINSLEN=120;SVINSSEQ=TTGAATGGCATTGAGTGGAATCATCGATTGAATGGAATCTAAAGAAATCCTCGAATGGACTGGAGTGGAGTCATCGAATGGACTCGAGGGGAATCATCATCGAATGGAATCTAATGGAAT	TR:VR	521:4	242:1
chr3	103495639	d_1169	T	<DEL>	.	PASS	END=103496255;SVTYPE=DEL;SVLEN=-616	TR:VR	43:11	23:0
chr6	62217392	r_313_0	G	G]chr6:66658427]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_313_1	TR:VR	90:4	40:0
chr6	66658427	r_313_1	T	T]chr6:62217392]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_313_0	TR:VR	90:4	40:0
chr11	64210232	r_56_0	G	]chr6:42407919]A	.	Too_low_VAF	SVTYPE=BND;MATEID=r_56_1	TR:VR	161:3	43:0
chr6	42407919	r_56_1	A	A[chr11:64210232[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_56_0	TR:VR	161:3	43:0
chr20	30425128	r_190_0	C	CCCTTAAAAGCTAAATTAATGTCTAAAAGTGACGATTGTATGTATGATGTGAGTGTGTGCGCATGTGTATGCGTGTGTTGTGTATGTATGGTGTGTGTATGTGGTCTGTGTGTGTAGTAGGTTCATGGGGTATGTATATGTGTGTGTGGTGTGTATCGTGGGTGTTATGTGTGTATACTGTGTGTAGTGG[chr7:154574280[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_190_1;SVINSLEN=189;SVINSSEQ=CCTTAAAAGCTAAATTAATGTCTAAAAGTGACGATTGTATGTATGATGTGAGTGTGTGCGCATGTGTATGCGTGTGTTGTGTATGTATGGTGTGTGTATGTGGTCTGTGTGTGTAGTAGGTTCATGGGGTATGTATATGTGTGTGTGGTGTGTATCGTGGGTGTTATGTGTGTATACTGTGTGTAGTGG	TR:VR	169:5	121:1
chr7	154574280	r_190_1	G	]chr20:30425128]CCACTACACACAGTATACACACATAACACCCACGATACACACCACACACACATATACATACCCCATGAACCTACTACACACACAGACCACATACACACACCATACATACACAACACACGCATACACATGCGCACACACTCACATCATACATACAATCGTCACTTTTAGACATTAATTTAGCTTTTAAGGG	.	Too_low_VAF	SVTYPE=BND;MATEID=r_190_0;SVINSLEN=189;SVINSSEQ=CCACTACACACAGTATACACACATAACACCCACGATACACACCACACACACATATACATACCCCATGAACCTACTACACACACAGACCACATACACACACCATACATACACAACACACGCATACACATGCGCACACACTCACATCATACATACAATCGTCACTTTTAGACATTAATTTAGCTTTTAAGG	TR:VR	169:5	121:1
chr4	119472901	r_258	T	<DUP>	.	PASS	END=165216713;SVTYPE=DUP;SVLEN=45743812	TR:VR	90:5	34:0
chr6	20342346	r_282	T	<DEL>	.	PASS	END=21202636;SVTYPE=DEL;SVLEN=-860290	TR:VR	64:8	36:0
chr6	62228533	r_314	C	<DUP>	.	PASS	END=66675131;SVTYPE=DUP;SVLEN=4446598	TR:VR	76:5	48:0
chrX	64595213	r_380_0	A	A]chrX:97071472]	.	PASS	SVTYPE=BND;MATEID=r_380_1	TR:VR	79:10	47:0
chrX	97071472	r_380_1	T	T]chrX:64595213]	.	PASS	SVTYPE=BND;MATEID=r_380_0	TR:VR	79:10	47:0
chr14_GL000225v1_random	76112	d_519	G	<DEL>	.	Too_low_VAF	END=76665;SVTYPE=DEL;SVLEN=-553;SVINSLEN=5;SVINSSEQ=GGCAT	TR:VR	742:5	717:0
chr19	29702749	r_140	G	<DEL>	.	PASS	END=29704848;SVTYPE=DEL;SVLEN=-2099;SVINSLEN=2;SVINSSEQ=CT	TR:VR	332:204	23:0
chr5	41312489	r_268	T	<DUP>	.	PASS	END=42064667;SVTYPE=DUP;SVLEN=752178	TR:VR	105:14	43:0
chr6	62228536	r_315_0	C	CA]chr6:67557737]	.	PASS	SVTYPE=BND;MATEID=r_315_1;SVINSLEN=1;SVINSSEQ=A	TR:VR	84:9	53:0
chr6	67557737	r_315_1	G	GT]chr6:62228536]	.	PASS	SVTYPE=BND;MATEID=r_315_0;SVINSLEN=1;SVINSSEQ=T	TR:VR	84:9	53:0
chr7	70495904	i_1058	A	<INS>	.	PASS	END=70495905;SVTYPE=INS;SVINSLEN=868;SVINSSEQ=CCCCACTCACACCACGTACACAGTCAGACACACACACCCCACACATGCACACGTCACATCAGCATCGATCACACACCCCCTCACACACACCACGTACACAGTCGCACACACACACCCCACACATGCACACGTCACATCAGCATCGATCACACACCCCACTCACACACACCACGTACACAGTCACACACACACACACACCCCACACATGCACACGCGTCACATCAGCATCGATCACACACCCCACTCACACCACGCACACAAACACACACACGCCCCACACATGCACATGTCACATCAGCGTCAGCGATCACACATCCCACTCACACACACACCACGCAGACACAGTCACACACACACACCCCACACATGCACACGTCACATCAGCATCGATCACACACACACCACTCATACCACATACACAGTCACACACACACACCCCCCCACACACATGCACACGTCACATCAGCATCTATCACACACCCCACTCACAGACACCACATGTACACAGTCAGACACACACCCCACACATGCACACGTCACATCAGCATCGATCACACACCCCACTCACACACACCACGCACACAGTCACACACACACACACCCCCACACATGCACACGTCACATCAGCATACGATCACACACACCACGTACACAGTCACACACACACACACACCCCACACATGCACACGTCACATCAGCATCGATCACACACCCCACTCACACACACCACGTACACAGTCACACACACGCACACCCCACACATGCACATGTCACATCAGCGTCGATCACACACCCCACTCACACCACGTACACAGACACACACACACACCCACACATGCACACGTCACATCAGCATCGATCACACACC	TR:VR	30:4	18:0
chrX	64595216	r_381_0	G	[chrX:97071485[C	.	PASS	SVTYPE=BND;MATEID=r_381_1	TR:VR	79:11	47:0
chrX	97071485	r_381_1	C	[chrX:64595216[C	.	PASS	SVTYPE=BND;MATEID=r_381_0	TR:VR	79:11	47:0
chr11	65516330	r_57_0	G	G]chr9:34220164]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_57_1	TR:VR	118:4	52:0
chr9	34220164	r_57_1	C	C]chr11:65516330]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_57_0	TR:VR	118:4	52:0
chr17	21842279	d_802	C	<DEL>	.	Too_low_VAF	END=21842401;SVTYPE=DEL;SVLEN=-122;SVINSLEN=105;SVINSSEQ=ATCGCTCCGGCTTTCTCCCGCGCCGCCGCGGCTTTCGCCTCCTGCCGCCGCGCTTCTCCCCCCGCCGCCGCTGCGCTGCTCGGCTTTTCGCGCTGGCCCGCCGAG	TR:VR	95:3	47:0
chr6	25899300	d_1318	A	<DEL>	.	PASS	END=25899445;SVTYPE=DEL;SVLEN=-145	TR:VR	35:15	19:0
chr6	62228698	r_316	G	<DEL>	.	PASS	END=66654867;SVTYPE=DEL;SVLEN=-4426169	TR:VR	79:5	43:0
chr7	70790654	d_1379	A	<DEL>	.	PASS	END=70791830;SVTYPE=DEL;SVLEN=-1176	TR:VR	35:6	26:0
chrX	144753835	i_1250	T	<INS>	.	PASS	END=144753835;SVTYPE=INS;SVINSLEN=59;SVINSSEQ=TTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGT	TR:VR	44:7	19:0
chrX	65154308	r_382	A	<DEL>	.	PASS	END=86909505;SVTYPE=DEL;SVLEN=-21755197;SVINSLEN=1;SVINSSEQ=G	TR:VR	72:8	48:0
chr14_GL000225v1_random	76749	d_521	A	<DEL>	.	Too_low_VAF	END=77102;SVTYPE=DEL;SVLEN=-353;SVINSLEN=10;SVINSSEQ=GTGATCACGC	TR:VR	736:7	710:1
chr4	1394513	r_231	T	<DUP>	.	PASS	END=1625419;SVTYPE=DUP;SVLEN=230906;SVINSLEN=8;SVINSSEQ=TGGTCAGG	TR:VR	45:5	48:0
chr5	41626118	r_269_0	A	]chrUn_KI270519v1:78723]T	.	Too_low_VAF	SVTYPE=BND;MATEID=r_269_1	TR:VR	74:3	44:0
chrUn_KI270519v1	78723	r_269_1	T	T[chr5:41626118[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_269_0	TR:VR	74:3	44:0
chr6	26094944	r_283	G	<DEL>	.	PASS	END=26111302;SVTYPE=DEL;SVLEN=-16358	TR:VR	63:6	15:0
chr8	30473370	r_346	T	<DEL>	.	PASS	END=30501481;SVTYPE=DEL;SVLEN=-28111	TR:VR	60:14	33:0
chr16	84878421	r_111	T	<DUP>	.	PASS	END=85008059;SVTYPE=DUP;SVLEN=129638	TR:VR	134:7	39:0
chr19	29939807	r_141	T	<DEL>	.	Too_low_VAF	END=30094779;SVTYPE=DEL;SVLEN=-154972	TR:VR	982:6	43:0
chr6	65288403	r_317_0	T	T]chr6:67556863]	.	PASS	SVTYPE=BND;MATEID=r_317_1	TR:VR	94:18	42:0
chr6	67556863	r_317_1	G	G]chr6:65288403]	.	PASS	SVTYPE=BND;MATEID=r_317_0	TR:VR	94:18	42:0
chr8	34853969	d_1415	T	<DEL>	.	PASS	END=34854020;SVTYPE=DEL;SVLEN=-51	TR:VR	46:14	23:0
chr9	137721679	i_1172	T	<INS>	.	PASS	END=137721684;SVTYPE=INS;SVINSLEN=262;SVINSSEQ=CCCAGACTTCTCACACTCACCTCCCAGACTTCTCACACTCACCCCCTCCCAGACTTCTCACACTCACCCCCTCCCAGACTTCTCACACTCACCCCCTCCCAGACTTCTCACACCCACCCTCCCACACCCAGACTTCTCACACTCACCCCTCCCAGACTTCTCACACTCACCCCCTCCACCCAGACTTCTCACACTCACCCCCTCCCAGACTTCTCAATTATTTCATTTTCATTTGTTTTCTATAAAAGCAGACTTCCCAATA	TR:VR	40:5	20:0
chr1	240300139	d_289	T	<DEL>	.	PASS	END=240301730;SVTYPE=DEL;SVLEN=-1591	TR:VR	94:13	24:0
chr19	29950476	r_142_0	G	[chr19:29951500[T	.	PASS	SVTYPE=BND;MATEID=r_142_1	TR:VR	607:57	19:0
chr19	29951500	r_142_1	T	[chr19:29950476[T	.	PASS	SVTYPE=BND;MATEID=r_142_0	TR:VR	607:57	19:0
chr19	58150960	d_893	A	<DEL>	.	PASS	END=58151208;SVTYPE=DEL;SVLEN=-248	TR:VR	35:7	23:0
chr2	91515294	d_1012	G	<DEL>	.	Too_low_VAF	END=91515390;SVTYPE=DEL;SVLEN=-96;SVINSLEN=35;SVINSSEQ=GTGGCTGGTTTTTCTGGCTTGGCTGCCTAGCTGGC	TR:VR	245:3	117:1
chr21	10775617	r_202_0	C	C[chr5:41626117[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_202_1	TR:VR	174:3	135:0
chr5	41626117	r_202_1	T	]chr21:10775617]T	.	Too_low_VAF	SVTYPE=BND;MATEID=r_202_0	TR:VR	174:3	135:0
chr6	65288741	r_318	A	<DUP>	.	PASS	END=67556672;SVTYPE=DUP;SVLEN=2267931	TR:VR	93:9	42:0
chr9	137819155	d_1467	C	<DEL>	.	PASS	END=137819298;SVTYPE=DEL;SVLEN=-143;SVINSLEN=67;SVINSSEQ=TGAGGGGGGGGCGCCGTGTACCGAGACCGTAGAGAGGCCGACTGAGGGCGCCATGTACCCGAGACCG	TR:VR	33:3	22:0
chrX	149684928	d_1555	T	<DEL>	.	PASS	END=149684979;SVTYPE=DEL;SVLEN=-51;SVINSLEN=1;SVINSSEQ=T	TR:VR	26:6	19:0
chrX	80111837	d_1546	C	<DEL>	.	Too_small_size	END=80111879;SVTYPE=DEL;SVLEN=-42	TR:VR	30:9	17:0
chr2	47582865	r_168_0	T	TTTTTTTTTTTTTTTTTTTT]chr22:23856364]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_168_1;SVINSLEN=19;SVINSSEQ=TTTTTTTTTTTTTTTTTTT	TR:VR	114:3	44:0
chr22	23856364	r_168_1	A	AAAAAAAAAAAAAAAAAAAA]chr2:47582865]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_168_0;SVINSLEN=19;SVINSSEQ=AAAAAAAAAAAAAAAAAAA	TR:VR	114:3	44:0
chr4	141693013	d_1242	T	<DEL>	.	Too_small_size	END=141693050;SVTYPE=DEL;SVLEN=-37	TR:VR	51:23	27:0
chr6	65289443	r_319_0	G	G]chr6:67541745]	.	PASS	SVTYPE=BND;MATEID=r_319_1	TR:VR	84:9	44:0
chr6	67541745	r_319_1	A	A]chr6:65289443]	.	PASS	SVTYPE=BND;MATEID=r_319_0	TR:VR	84:9	44:0
chr11	70515279	r_58	T	<DEL>	.	PASS	END=70819380;SVTYPE=DEL;SVLEN=-304101	TR:VR	52:11	43:0
chr19	30031505	r_143_0	T	T]chr19:30043060]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_143_1	TR:VR	814:8	34:0
chr19	30043060	r_143_1	T	T]chr19:30031505]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_143_0	TR:VR	814:8	34:0
chr3	196249908	i_876	G	<INS>	.	Too_small_size	END=196249908;SVTYPE=INS;SVINSLEN=29;SVINSSEQ=AGGCTGAGGACCAGATACTACTATGCCCA	TR:VR	49:4	13:0
chr6	65305064	r_320_0	C	[chr6:66674370[G	.	PASS	SVTYPE=BND;MATEID=r_320_1	TR:VR	88:20	39:0
chr6	66674370	r_320_1	G	[chr6:65305064[G	.	PASS	SVTYPE=BND;MATEID=r_320_0	TR:VR	88:20	39:0
chrX	92706957	d_1547	A	<DEL>	.	PASS	END=92708606;SVTYPE=DEL;SVLEN=-1649	TR:VR	34:9	20:0
chr1	2654310	d_7	A	<INS>	.	Too_low_VAF	END=2654368;SVTYPE=INS;SVINSLEN=226;SVINSSEQ=GCCTGGAACAGGCACCCACAGGCCCCTAGGCGAGCATCTGGACAGCCTGCCTTGAACAGCACCCATACGCCCAGATGAGAATCTGACACCCTGAACAGCAGTCTGCACCCGGAGGCGCGCACGTGACAGTCTGGAACAGCACCCACAACCCCAGGGGAGCATCTGACGGCCTGGAACGGCACCCACACCCCCAGGTATAGCATCCGACATCCTGAAACAGCTCCCA	TR:VR	144:5	88:0
chr19	30032326	r_144_0	T	[chr19:30037167[TC	.	Too_low_VAF	SVTYPE=BND;MATEID=r_144_1;SVINSLEN=1;SVINSSEQ=T	TR:VR	717:33	27:0
chr19	30037167	r_144_1	C	[chr19:30032326[AC	.	Too_low_VAF	SVTYPE=BND;MATEID=r_144_0;SVINSLEN=1;SVINSSEQ=A	TR:VR	717:33	27:0
chr3	197384767	d_1202	G	<INS>	.	PASS	END=197384848;SVTYPE=INS;SVINSLEN=137;SVINSSEQ=CGAGAGTTTACGATCTGCAGCGCATTTGGGATAGTTTATTATCTGTAGTGCATTTGTGATAGTTTACCATCCGTAGTGTATTTGCAATAGTTTACTATCTGTAGCACATCTGGGATAGTTTACTATCTGCAGTGCAT	TR:VR	32:3	20:0
chr11	83017948	d_403	C	<DEL>	.	PASS	END=83018016;SVTYPE=DEL;SVLEN=-68	TR:VR	40:3	18:0
chr12	95081923	r_66	C	<DEL>	.	PASS	END=95548718;SVTYPE=DEL;SVLEN=-466795	TR:VR	46:5	28:0
chr17	21844137	i_450	T	<INS>	.	Too_low_VAF	END=21844138;SVTYPE=INS;SVINSLEN=361;SVINSSEQ=TGCTCCTCCGCCGCCGCGGCTTTTGCCCGTGGCGTTTTTGCCCCCGCCGCCCGCGGCTTTTTGCCCCCGCCGCCGAGGCTTTTTTCCCCCGCCGCCGCTGCTTTTTGCGCGTTTTTTGCCCCACGCCGCCGCGGCTTTGCTGCTTTTTGCCGCCGCCGCTTTGGGTCCCGGCCGCCGCGGCTTTTGGCTACCGGCCGCCGCGGGTTTTGCAACGCGGCCCCCCGCCGCGGCTTTTTGCCCCCCGCCGCCGCGGCTTTTTGCCGCCGCCGCCAGGCTTTTTGCGCCCACCGCCGCGGCTTTTGCCCCCGTCCCCATGGGTTTCCGCCGCCGCTTTTTTTGACCCCGCCGCCTTGGCTTTACC	TR:VR	97:4	50:1
chr19	30044440	r_145_0	C	[chr19:30044943[T	.	Too_low_VAF	SVTYPE=BND;MATEID=r_145_1	TR:VR	643:8	22:0
chr19	30044943	r_145_1	T	[chr19:30044440[T	.	Too_low_VAF	SVTYPE=BND;MATEID=r_145_0	TR:VR	643:8	22:0
chr2	5885307	d_924	A	<DEL>	.	PASS	END=5885598;SVTYPE=DEL;SVLEN=-291	TR:VR	43:10	26:0
chr3	106828934	d_1171	T	<DEL>	.	PASS	END=106830864;SVTYPE=DEL;SVLEN=-1930	TR:VR	40:9	25:0
chr3	197459334	r_228	T	<DUP>	.	PASS	END=197460220;SVTYPE=DUP;SVLEN=886	TR:VR	40:6	21:0
chr6	31428233	i_1001	A	<INS>	.	PASS	END=31428233;SVTYPE=INS;SVINSLEN=777;SVINSSEQ=TCTATTATATATATATATATCCTATATATATTCTATATATCTATATATATCCTATATATCCTATATCTATTATATATATCCTATATATATTCTATATATATATATCCTATATATCTCTATATATCCTATATATATATCCTATATATATCCTATATATATATATATATATATATATCTCCATATATATATCTATCTATATATCCTATATATATTCTATATATATATCCTATATATATATTCTATATATATATCCTATATATATATCCTATATATATATCCTATATATATATTCTATATATACATCCTATATATATATTCTATATATATATCCTATATATATATTCTATATATATATCCTATATATATATTCTATATATACATCCTTTATATATATATTCTATATATATATCCTTTATATATATATCCTATATATATCCTTTATATATATATATCCTATATATATCCCATATATATATCCTATATATATATCCTATATATATATCCTATATATATATCCCATATATATATCCCATGTATATATATATATCCATATATATATCCCATATATACATGCGATATATATATCCCATATATATATCCTATATATATATATCCTATATATATATCTCATATATATATCCTGTATATATATATCCCATATGTATATCCCATATATATATTCTATATATATCCTATATACTCTATATATATATCCTATATATATTCTATATATATATCCTATATACATATATTCTATATATATCCTATATATATTCT	TR:VR	118:9	44:0
chr6	66674798	r_321_0	A	A]chr6:67557898]	.	PASS	SVTYPE=BND;MATEID=r_321_1	TR:VR	85:17	42:0
chr6	67557898	r_321_1	T	T]chr6:66674798]	.	PASS	SVTYPE=BND;MATEID=r_321_0	TR:VR	85:17	42:0
chr1	194440454	r_22_0	T	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT[chr14:78263357[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_22_1;SVINSLEN=35;SVINSSEQ=TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	TR:VR	98:3	39:0
chr14	78263357	r_22_1	T	]chr1:194440454]AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAT	.	Too_low_VAF	SVTYPE=BND;MATEID=r_22_0;SVINSLEN=35;SVINSSEQ=AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	TR:VR	98:3	39:0
chr11	83018316	i_214	A	<INS>	.	PASS	END=83018316;SVTYPE=INS;SVINSLEN=61;SVINSSEQ=GAAAAGGAATCTCCAGTTTTTCATAGTGGTTGTACTAGCTTACATTCTCACCAGCACTGTA	TR:VR	41:3	18:0
chr16	14958041	r_97_0	A	[chr2:9847267[A	.	Too_low_VAF	SVTYPE=BND;MATEID=r_97_1	TR:VR	125:5	46:0
chr2	9847267	r_97_1	A	[chr16:14958041[A	.	Too_low_VAF	SVTYPE=BND;MATEID=r_97_0	TR:VR	125:5	46:0
chr19	30052966	r_146	C	<DEL>	.	Too_low_VAF	END=30366906;SVTYPE=DEL;SVLEN=-313940	TR:VR	984:10	45:0
chr6	66674805	r_322_0	A	[chr6:67540870[G	.	PASS	SVTYPE=BND;MATEID=r_322_1	TR:VR	91:5	43:0
chr6	67540870	r_322_1	G	[chr6:66674805[G	.	PASS	SVTYPE=BND;MATEID=r_322_0	TR:VR	91:5	43:0
chr1	194965514	r_23_0	C	[chr1:199469681[T	.	Too_low_VAF	SVTYPE=BND;MATEID=r_23_1	TR:VR	162:5	51:1
chr1	199469681	r_23_1	T	[chr1:194965514[T	.	Too_low_VAF	SVTYPE=BND;MATEID=r_23_0	TR:VR	162:5	51:1
chr1	2662586	d_10	G	<DEL>	.	Too_low_VAF	END=2662686;SVTYPE=DEL;SVLEN=-100;SVINSLEN=20;SVINSSEQ=CAGCACCGACAACCCCAGGT	TR:VR	184:5	90:1
chr13	109301649	r_70_0	T	T]chr16:12468240]	.	PASS	SVTYPE=BND;MATEID=r_70_1	TR:VR	58:9	38:0
chr16	12468240	r_70_1	T	T]chr13:109301649]	.	PASS	SVTYPE=BND;MATEID=r_70_0	TR:VR	58:9	38:0
chr16	14958271	r_98_0	G	GT]chr2:9828237]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_98_1;SVINSLEN=1;SVINSSEQ=T	TR:VR	123:5	49:0
chr2	9828237	r_98_1	A	AA]chr16:14958271]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_98_0;SVINSLEN=1;SVINSSEQ=A	TR:VR	123:5	49:0
chr18	79619016	i_502	G	<INS>	.	PASS	END=79619017;SVTYPE=INS;SVINSLEN=2938;SVINSSEQ=TGAGGACACTGTTTACATGCTAACAGGATGACAGCAGACATTGTGTGAAATCAGTCAGTGTGAGCCCACTGTTTACATGCTAACAGGATCACAGCAGACACTGTGTGAAATCAGTCCGTGTGAGCACACTGTTTACATGCTAACAGGATGACAGCAGACACTGGGTGAAATCAGTCAGTGTGAGCACACTGTTTACACGCTAACAGGATGACAGCAGACACTGTGTGAAATCAGTCAGTGTGAGCCCACTGTTTACATGCTAACAGGATGACAGCAGACACTGTGTGAAATCAGTCCGTGTGAGCACACTGTTTACATGCTAACAGGATGACAGCAGACACTGGGTGAAATCAGTCAGTGTGAGCACACTGTTTACACGCTAACAGGATCACAGCAGACATTGTGTGAAATCAGTGTGAGCACACTGTTTACCATGTTAAGAGGACCACAGCAGACACTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACACGCTAACAGGACCACAGCAGACACTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACATGCTAACAGGATGACAGCAGACATTGTGTTAAATCAGTCAGTGTGAGCACACTGTTTACATGCTAACAGGACGACAGCAGACACTGTGAAATCAGTCAGTGTGAGGACACTGTTTACATGCTAACAGGACGACAGCAGACACTGTGTGAAATCAGTCCGTGTGAGCACACTGTTTACATGCTAACAGGATGACAGCAGACACTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACACGCTAACAGGATGACAGCAGACACTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACATGCTAACCAGGATGACAGCAGACACTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACACGCTAACAGGATGACAGCAGACACTGTGTGTGGAAATCAGTCCGTGTGAGCACACTGTTTACATGCTAACAGGACCACAGCAGACACTGTGTGAAATCAGTCCGTGTGAGCACACTGTTTACATGCTAACAGGATGACAGCAGACACTGGCTGAAATCAGTCAGTGTGAGCACACTGTTTACACGCTAACAGGATCACAGCAGACATTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACACGCTAACAGGATGACAGCAGACACTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACACGCTAACAGGATGACAGCAGACACTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACACGCTAACAGGATGACAGCAGACACTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACACGCTCACAGGACGACAGCAGACACTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACATGCTAACAGGACGACAGCAGACACTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACACGCTAACAGGACGACAGCAGACACTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACACGCTAACAGGATCACAGCAGACATTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACATGCTAACAGGACGACAGCAGACACTGTGTGAAATCAGTCCGTGTGAGCACACTGTTTACACGCTAACAGGACCACAGCAGACACTGTGTGAAATCAGTCCGTGTGAGCACACTGTTTACACGCTAACAGGATGACAGCAGACATTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACACGCTAACAGGATCACAGCAGACATTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACATGCTAACAGGATGACAGCAGACACTGTGTGAAATCAGTCAGTGTGAGGACACTGTTTACACGCTAACAGGACCACAGCAGACACTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACACGCTAACAGGATGACAGCAGACATTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACACGCTAACAGGATCACAGCAGACATTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACATGCTAACAGGATGACAGCAGACACTGTGCGAAATCAGTCAGTGTGAGCACACTGTTTACGTGCTAACAGGACTACAGCAGACATTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACGTGCTAACAGGACCACAGCAGACATTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACGTGCTAACAGGACGACAGCAGACACTGTGTGAAATCAGTGTGAGCACACTGTTTACATGCTAACAGGACGACAGCAGACACTGTGTGAAATCAGTCCGAGTGTGAGGACACTGTTTACACGCTAACAGGATGACAGCAGACACTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACACGCTAACAGGATGACAGCAGACATTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACATGCTAACAGGATGACAGCAGACACTGTGTGAAATCAGTCAGTGTGAGGACACTGTTTACATGCTAACAGGACCACAGCAGACACTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACACGCTAACAGGATGACAGCAGACACTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACATGCTAACAGGACACAGCAGACACTGTGTGAAATCAGTCCGTGTGAGCACACTGTTTACATGCTAACACGATGACAGCAGACACTGTGTGAAATCAGTCCGTGTGAGCACACTGTTTACACGCTAACAGGACCACAGCAGACACTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACACGCTAACAGGATGACAGCAGACATTGTGTGAAATCAGTCCGTGTGAGCACACTGTTTACATGCTAACAGGATGACAGCAGACACTGTGTGAAATCAGTCCGTGTG	TR:VR	46:9	20:0
chr6	67556685	r_323_0	C	[chr6:67557763[G	.	PASS	SVTYPE=BND;MATEID=r_323_1	TR:VR	53:17	25:0
chr6	67557763	r_323_1	G	[chr6:67556685[G	.	PASS	SVTYPE=BND;MATEID=r_323_0	TR:VR	53:17	25:0
chr1	194965518	r_24_0	T	TTTTTTTTTCTATTA]chr1:199471111]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_24_1;SVINSLEN=14;SVINSSEQ=TTTTTTTTCTATTA	TR:VR	162:5	51:1
chr1	199471111	r_24_1	T	TTAATAGAAAAAAAA]chr1:194965518]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_24_0;SVINSLEN=14;SVINSSEQ=TAATAGAAAAAAAA	TR:VR	162:5	51:1
chr13	109301656	r_71_0	T	[chr16:12468235[T	.	PASS	SVTYPE=BND;MATEID=r_71_1	TR:VR	58:8	38:0
chr16	12468235	r_71_1	T	[chr13:109301656[T	.	PASS	SVTYPE=BND;MATEID=r_71_0	TR:VR	58:8	38:0
chr14	52702771	r_79	T	<DEL>	.	PASS	END=52705201;SVTYPE=DEL;SVLEN=-2430	TR:VR	24:14	20:0
chr18	79619177	i_503	T	<INS>	.	PASS	END=79619177;SVTYPE=INS;SVINSLEN=2223;SVINSSEQ=TGTGTTAAATCAGTCAGTGTGAGCACACTGTTTACATGCTAACAGGACGACAGCAGACACTGTGAAATCAGTCAGTGTGAGGACACTGTTTACATGCTAACAGGACGACAGCAGACACTGTGTGAAATCAGTCCGTGTGAGCACACTGTTTACATGCTAACAGGATGACAGCAGACACTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACACGCTAACAGGATGACAGCAGACACTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACATGCTAACAGGATGACAGCAGACACTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACACGCTAACAGGATGACAGCAGACACTGTGTGAAATCAGTCCGTGTGAGCACACTGTTTACATGCTAACAGGACCACAGCAGACACTGTGTGAAATCAGTCCGTGTGAGCACACTGTTTACATGCTAACAGGATGACAGCAGACACTGGCTGAAATCAGTCAGTGTGAGCACACTGTTTACACGCTAACAGGATCACAGCAGACATTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACACGCTAACAGGATGACAGCAGACACTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACACTAACAGGATGACAGCAGACACTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACACGCTAACAGGATGACAGCAGACACTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACACGCTCACAGGACGACAGCAGACACTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACATGCTAACAGGACGACAGCAGACACTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACACGCTAACAGGACGACAGCAGACACTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACACGCTAACAGGATGACAGCAGACATTGTGTGAAATCAGTCCACAGTGTGAGCCCACTGTTTACATGCTAACAGGACGACAGCAGACACTGTGTGAAATCAGTCCGTGTGAGCACACTGTTTACACGCTAACAGGACCACAGCAGACACTGTGTGAAATCAGTCCGTGTGAGCACACTGTTTACACGCTAACAGGATGACAGCAGACATTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACACGCTAACAGGATCACAGCAGACATTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACATGCTAACAGGATGACAGCAGACACTGTGTGAAATCAGTCAGTGTGAGGACACTGTTTACACGCTAACAGGACCACAGCAGACACTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACACGCTAACAGGATGACAGCAGACATTGTGTGAAATCAGTCAGGTGTGAGCACACTGTTTACACGCTAACAGGATCACAGCAGACATTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACATGCTAACAGGATGACAGCAGACACTGTGCGAAATCAGTCAGTGTGAGCACACTGTTTACGTGCTAACAGGACCACAGCAGACATTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACGTGCTAACAGGACCACAGCAGACATTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACGTGCTAACAGGACTATTGACAGCAGACACTGTGTGAAATCAGTGTGAGCACACTGTTTACATGCTAACAGGACGACAGCAGACACTGTGTGAAATCAGTCAGTGTGAGGACACTGTTTACACGCTAACAGGATGACAGCAGACACTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACACGCTAACAGGATGACAGCAGACATTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACATGCTAACAGGATGACAGCAGACACTGTGTGAAATCAGTCAGTGTGAGGACACTGTTTACATGCTAACAGGACCACAGCAGACACTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACACGCTAACAGGATGACAGCAGACACTGTGTGAAATCAGTCAGTGTGAGCACACACTGTTTACATGCTAACAGGACGACAGCAGACACTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACATGCTAACACGATGACAGCAGACACTGTGTGAAATCAGTCCGTGTGAGCACACTGTTTACACGCTAACAGGACCACAGCAGACACT	TR:VR	46:3	20:0
chr4	153627513	r_259	G	<DUP>	.	Too_low_VAF	END=153750696;SVTYPE=DUP;SVLEN=123183	TR:VR	84:3	44:0
chr6	67556895	r_324_0	T	[chr6:67557067[T	.	PASS	SVTYPE=BND;MATEID=r_324_1	TR:VR	51:8	23:0
chr6	67557067	r_324_1	T	[chr6:67556895[T	.	PASS	SVTYPE=BND;MATEID=r_324_0	TR:VR	51:8	23:0
chr16	17952655	r_99_0	G	[chr16:17964788[C	.	PASS	SVTYPE=BND;MATEID=r_99_1	TR:VR	50:15	25:0
chr16	17964788	r_99_1	C	[chr16:17952655[C	.	PASS	SVTYPE=BND;MATEID=r_99_0	TR:VR	50:15	25:0
chr19	30161349	r_147_0	C	C]chr19:30173447]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_147_1	TR:VR	815:8	38:0
chr19	30173447	r_147_1	G	G]chr19:30161349]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_147_0	TR:VR	815:8	38:0
chr2	162936686	i_695	A	<INS>	.	PASS	END=162936686;SVTYPE=INS;SVINSLEN=106;SVINSSEQ=ACTTATATACATATTATATATATTATATATTGTATATATAATATATATATTATATATTATATATTGTATATATAATATACATTATATATATTATATATTATATATA	TR:VR	29:3	24:0
chr4	52949991	r_245_0	T	[chr4:52977278[TTGTA	.	PASS	SVTYPE=BND;MATEID=r_245_1;SVINSLEN=4;SVINSSEQ=TTGT	TR:VR	131:20	36:0
chr4	52977278	r_245_1	A	[chr4:52949991[ACAAA	.	PASS	SVTYPE=BND;MATEID=r_245_0;SVINSLEN=4;SVINSSEQ=ACAA	TR:VR	131:20	36:0
chr9	29577048	i_1147	A	<INS>	.	PASS	END=29577060;SVTYPE=INS;SVINSLEN=130;SVINSSEQ=AAATGGCCATAGATGGCCAGATCAAGTAATCCTACTCATTTTACCCTGTATTACTGAAAATAAAAATGGGGGGGGGCAAATAAAGACTTTAATATCTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	TR:VR	47:21	19:0
chr1	200249127	r_26	C	<DEL>	.	PASS	END=200917743;SVTYPE=DEL;SVLEN=-668616	TR:VR	117:9	37:0
chr1	2668894	d_13	C	<DEL>	.	PASS	END=2669074;SVTYPE=DEL;SVLEN=-180;SVINSLEN=20;SVINSSEQ=CACACCCCCAGGCGAGCATC	TR:VR	212:13	97:1
chr13	110568345	r_72_0	T	[chr16:54589969[T	.	PASS	SVTYPE=BND;MATEID=r_72_1	TR:VR	72:7	31:0
chr16	54589969	r_72_1	T	[chr13:110568345[T	.	PASS	SVTYPE=BND;MATEID=r_72_0	TR:VR	72:7	31:0
chr14	71589896	r_80_0	A	A]chr14:71601683]	.	PASS	SVTYPE=BND;MATEID=r_80_1	TR:VR	39:19	32:0
chr14	71601683	r_80_1	G	G]chr14:71589896]	.	PASS	SVTYPE=BND;MATEID=r_80_0	TR:VR	39:19	32:0
chr16	17952655	r_100_0	G	GTTATT]chr16:17964751]	.	PASS	SVTYPE=BND;MATEID=r_100_1;SVINSLEN=5;SVINSSEQ=TTATT	TR:VR	50:11	25:0
chr16	17964751	r_100_1	A	AAATAA]chr16:17952655]	.	PASS	SVTYPE=BND;MATEID=r_100_0;SVINSLEN=5;SVINSSEQ=AATAA	TR:VR	50:11	25:0
chr18	79634137	i_505	G	<INS>	.	PASS	END=79634137;SVTYPE=INS;SVINSLEN=974;SVINSSEQ=GTGGTGGTGATGGTGGTGGTGGTGGTGATGGTGGTGATGGTGGTGGTGGTGGTGGTGGTGATGGTGGTGATGGTGGTGGTGATGGTGGTGGTGATGGTGGTGATGGTGGTGATGATGGTGGTGATGGTGTTGACAGTGGTGGTGATGGTGATGATGGTGGTGATGGTGGTGATGGTGGTGATGGTGGTGGTGATAATGGTGGTGGTGATGGTGGTGATGGTGGTGGTGGATGGTGGTTGTGATGGTGATGATGGTGGTGATGATGGCGGTGATGGTGGTGGTGCTGCTGATGGTGATGGTGGTGATGGTGGTGGTGATGGTGGTGGTGATGGTGGTGGTGGTGGTGGTGGTGGTCGATGGTGATGGTGGTGGTGGTGCCGGTGATGATGGTGGTGATGGTGGTGGTGGTGATGGTGGTGGTGGTGGTGATGGTGGTGATGGTGATGGTGATGGTGATGATGGTGTTGGTGGTGATGGTGGTGATGGTGGTGGTGATGGTGGTGGTGATGGTGGTGGTGGTGGTGACGGTAGTGATGGCAGTGATGGTGGTGATGGTGGTGGTGATGGTGGTGATGGTGGTGGTGATGGTGGTGGTTGTGATGGTGGTGGTGATGATGGTGGTGATGGTGGTATGGCATGGTGGTGATGGTGGTGGTGACGGTGATGACGGTGGTGATGGTGACAGTAGTGGTGGTGGTGACGGTGGTGGTGACAGTGACGTTCACGGTGGTAGTGTGACGATGATGGTAAAAGTGAAGGTGGTGTTGGTGATGATGGTGGTGGTGGTGGTGGTGTGAGGTGGTGGTGATGGTGATGCTGGTGAAAGATGTATGGTGGTGGTGATTGTGACAGTAATGGTGGTGATGACCCACTGGTGTAGATGGTGGTGCTAATGTGTGTGTATGGGTGATGGTGGTAGGCAGTGAGTGGCAAGACCTGGAGATGGAACAGTGGACATGGTGGTGACAGGGCAG	TR:VR	43:4	23:0
chr19	30187383	r_148_0	C	CA]chr19:30203517]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_148_1;SVINSLEN=1;SVINSSEQ=A	TR:VR	860:11	27:0
chr19	30203517	r_148_1	A	AT]chr19:30187383]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_148_0;SVINSLEN=1;SVINSSEQ=T	TR:VR	860:11	27:0
chr21	20022443	d_1093	T	<DEL>	.	PASS	END=20022641;SVTYPE=DEL;SVLEN=-198	TR:VR	44:7	28:0
chr3	10893	r_213_0	T	TAACCCTAACCCTAACCCTAACCCTAACCCTTAACCCTTAACCCTTAACCCTTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCT]chr9:138240714]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_213_1;SVINSLEN=106;SVINSSEQ=AACCCTAACCCTAACCCTAACCCTAACCCTTAACCCTTAACCCTTAACCCTTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCT	TR:VR	395:7	336:1
chr9	138240714	r_213_1	T	TAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAAGGGTTAAGGGTTAAGGGTTAAGGGTTAGGGTTAGGGTTAGGGTTAGGGTT]chr3:10893]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_213_0;SVINSLEN=106;SVINSSEQ=AGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAAGGGTTAAGGGTTAAGGGTTAAGGGTTAGGGTTAGGGTTAGGGTTAGGGTT	TR:VR	395:7	336:1
chr4	54202299	r_246_0	G	[chr4:54204188[T	.	PASS	SVTYPE=BND;MATEID=r_246_1	TR:VR	75:4	25:0
chr4	54204188	r_246_1	T	[chr4:54202299[T	.	PASS	SVTYPE=BND;MATEID=r_246_0	TR:VR	75:4	25:0
chr6	6946393	r_278	G	<DUP>	.	PASS	END=25258493;SVTYPE=DUP;SVLEN=18312100	TR:VR	74:8	41:0
chr9	3195825	r_370	C	<DUP>	.	PASS	END=3210637;SVTYPE=DUP;SVLEN=14812	TR:VR	64:8	41:0
chr13	110602568	r_73	C	<DEL>	.	PASS	END=112735335;SVTYPE=DEL;SVLEN=-2132767	TR:VR	50:7	47:0
chr14	71589907	r_81_0	A	[chr14:71601699[A	.	PASS	SVTYPE=BND;MATEID=r_81_1	TR:VR	39:16	32:0
chr14	71601699	r_81_1	A	[chr14:71589907[A	.	PASS	SVTYPE=BND;MATEID=r_81_0	TR:VR	39:16	32:0
chr19	30193136	r_149	A	<DEL>	.	Too_low_VAF	END=30203505;SVTYPE=DEL;SVLEN=-10369	TR:VR	786:10	21:0
chr4	54258031	r_247_0	T	T]chr4:54262751]	.	PASS	SVTYPE=BND;MATEID=r_247_1	TR:VR	83:7	25:0
chr4	54262751	r_247_1	A	A]chr4:54258031]	.	PASS	SVTYPE=BND;MATEID=r_247_0	TR:VR	83:7	25:0
chr5	49660267	d_1288	T	<INS>	.	PASS	END=49660293;SVTYPE=INS;SVINSLEN=196;SVINSSEQ=CCATTCCATTCCATTCCTTTCCACTCCATTCCATTCGTGGTGATTCCATTCCATTCCATTCCATTGCATTCCATTCCATTCCATTCCATTCCACTCTGTTTGATTCAGTTCCATTCCATTCCATTCCACGCGATTTGATGCCATTGCAATCAGGTTGATGCCATTTCATTCCATTCTATGCGTGTTGATTCCAATC	TR:VR	522:31	302:0
chr9	35432385	r_372	G	<DUP>	.	PASS	END=35859277;SVTYPE=DUP;SVLEN=426892	TR:VR	86:5	38:0
chr4	155300277	d_1246	A	<DEL>	.	Too_small_size	END=155300315;SVTYPE=DEL;SVLEN=-38	TR:VR	49:13	28:0
chr4	54808442	r_248_0	A	[chr4:54812540[A	.	PASS	SVTYPE=BND;MATEID=r_248_1	TR:VR	71:10	35:0
chr4	54812540	r_248_1	A	[chr4:54808442[A	.	PASS	SVTYPE=BND;MATEID=r_248_0	TR:VR	71:10	35:0
chr9	35781048	r_373	A	<DUP>	.	PASS	END=35945233;SVTYPE=DUP;SVLEN=164185	TR:VR	119:11	41:0
chr19	30206205	r_151	T	<DEL>	.	Too_low_VAF	END=30210644;SVTYPE=DEL;SVLEN=-4439	TR:VR	690:9	19:0
chr2	191603520	r_170_0	T	T]chr2:192202609]	.	PASS	SVTYPE=BND;MATEID=r_170_1	TR:VR	42:6	31:0
chr2	192202609	r_170_1	T	T]chr2:191603520]	.	PASS	SVTYPE=BND;MATEID=r_170_0	TR:VR	42:6	31:0
chr4	159598671	r_260	A	<DEL>	.	Too_low_VAF	END=159676635;SVTYPE=DEL;SVLEN=-77964	TR:VR	79:3	49:0
chr4	5496744	r_232_0	T	[chr4:5505720[T	.	PASS	SVTYPE=BND;MATEID=r_232_1	TR:VR	56:24	32:0
chr4	5505720	r_232_1	T	[chr4:5496744[T	.	PASS	SVTYPE=BND;MATEID=r_232_0	TR:VR	56:24	32:0
chr5	127997208	i_976	T	<INS>	.	PASS	END=127997208;SVTYPE=INS;SVINSLEN=50;SVINSSEQ=TAATCCACACCAGCAGAGCTTATCTAAGCAATGGAAAAGACCATTGTAAT	TR:VR	15:9	23:0
chr6	34974442	r_288_0	C	C[chr9:126876169[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_288_1	TR:VR	80:3	37:1
chr9	126876169	r_288_1	C	]chr6:34974442]C	.	Too_low_VAF	SVTYPE=BND;MATEID=r_288_0	TR:VR	80:3	37:1
chr10	15771122	d_342	G	<DEL>	.	PASS	END=15776501;SVTYPE=DEL;SVLEN=-5379;SVINSLEN=206;SVINSSEQ=AGTGCAGTGGTGTAATTGTGGCTCACTGCAGCCATGATTACCCTAAATCCATGCCCTCACTTTTCCTTGCTAAATGGCCACTGAGGTCCCCACTTCACTTGTTCACTAATCAGAAACAGGCACCTCAGTGGCAGTTCAGTGGAAACCCTGATAAAGAATAAATTCAGTGAATGATGTGCAACTTTCTTTTTTTTTTTTTTTTTTTT	TR:VR	52:10	25:0
chr13	112717417	r_74_0	G	G[chr16:54550999[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_74_1	TR:VR	88:3	43:0
chr16	54550999	r_74_1	T	]chr13:112717417]T	.	Too_low_VAF	SVTYPE=BND;MATEID=r_74_0	TR:VR	88:3	43:0
chr19	30217769	r_152_0	T	TGAAAATGAAATTGACAAATGAAATGCATTTG]chr19:30218044]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_152_1;SVINSLEN=31;SVINSSEQ=GAAAATGAAATTGACAAATGAAATGCATTTG	TR:VR	607:3	21:0
chr19	30218044	r_152_1	T	TCAAATGCATTTCATTTGTCAATTTCATTTTC]chr19:30217769]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_152_0;SVINSLEN=31;SVINSSEQ=CAAATGCATTTCATTTGTCAATTTCATTTTC	TR:VR	607:3	21:0
chr4	55096822	r_249_0	A	A]chr4:55104101]	.	PASS	SVTYPE=BND;MATEID=r_249_1	TR:VR	99:7	24:0
chr4	55104101	r_249_1	C	C]chr4:55096822]	.	PASS	SVTYPE=BND;MATEID=r_249_0	TR:VR	99:7	24:0
chr6	38922318	r_289_0	T	[chr6:38923951[T	.	PASS	SVTYPE=BND;MATEID=r_289_1	TR:VR	82:47	23:0
chr6	38923951	r_289_1	T	[chr6:38922318[T	.	PASS	SVTYPE=BND;MATEID=r_289_0	TR:VR	82:47	23:0
chr1	204143776	r_27	A	<DEL>	.	Too_low_VAF	END=206086362;SVTYPE=DEL;SVLEN=-1942586	TR:VR	140:6	46:0
chr10	17003255	r_44	T	<DEL>	.	PASS	END=17113877;SVTYPE=DEL;SVLEN=-110622	TR:VR	78:4	49:0
chr13	112721508	r_75_0	C	]chr16:54623200]A	.	PASS	SVTYPE=BND;MATEID=r_75_1	TR:VR	86:5	39:0
chr16	54623200	r_75_1	A	A[chr13:112721508[	.	PASS	SVTYPE=BND;MATEID=r_75_0	TR:VR	86:5	39:0
chr17	27091847	r_118_0	T	T[chr2:131733391[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_118_1	TR:VR	62:3	47:0
chr2	131733391	r_118_1	T	]chr17:27091847]T	.	Too_low_VAF	SVTYPE=BND;MATEID=r_118_0	TR:VR	62:3	47:0
chr19	30262372	r_153_0	T	TTT]chr19:30271431]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_153_1;SVINSLEN=2;SVINSSEQ=TT	TR:VR	715:12	28:0
chr19	30271431	r_153_1	T	TAA]chr19:30262372]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_153_0;SVINSLEN=2;SVINSSEQ=AA	TR:VR	715:12	28:0
chr2	191884647	r_171_0	T	[chr2:216522779[AGAAACTTA	.	PASS	SVTYPE=BND;MATEID=r_171_1;SVINSLEN=8;SVINSSEQ=AGAAACTT	TR:VR	58:6	45:0
chr2	216522779	r_171_1	A	[chr2:191884647[AAGTTTCTA	.	PASS	SVTYPE=BND;MATEID=r_171_0;SVINSLEN=8;SVINSSEQ=AAGTTTCT	TR:VR	58:6	45:0
chr4	165216603	r_261_0	T	[chr4:165217673[G	.	PASS	SVTYPE=BND;MATEID=r_261_1	TR:VR	55:5	22:0
chr4	165217673	r_261_1	G	[chr4:165216603[G	.	PASS	SVTYPE=BND;MATEID=r_261_0	TR:VR	55:5	22:0
chr4	55242780	r_250_0	G	[chr4:55246867[A	.	PASS	SVTYPE=BND;MATEID=r_250_1	TR:VR	107:12	24:0
chr4	55246867	r_250_1	A	[chr4:55242780[A	.	PASS	SVTYPE=BND;MATEID=r_250_0	TR:VR	107:12	24:0
chr6	39064749	r_290_0	G	[chr6:41167009[A	.	Too_low_VAF	SVTYPE=BND;MATEID=r_290_1	TR:VR	235:4	39:0
chr6	41167009	r_290_1	A	[chr6:39064749[A	.	Too_low_VAF	SVTYPE=BND;MATEID=r_290_0	TR:VR	235:4	39:0
chr6	91923586	r_325_0	A	A]chr8:3917883]	.	PASS	SVTYPE=BND;MATEID=r_325_1	TR:VR	56:4	51:0
chr8	3917883	r_325_1	T	T]chr6:91923586]	.	PASS	SVTYPE=BND;MATEID=r_325_0	TR:VR	56:4	51:0
chr8	100884170	r_361	C	<DUP>	.	PASS	END=101057718;SVTYPE=DUP;SVLEN=173548	TR:VR	105:7	36:0
chr10	18177543	r_45	C	<DUP>	.	PASS	END=18211452;SVTYPE=DUP;SVLEN=33909	TR:VR	107:12	40:0
chr13	112734458	r_76_0	G	G]chr16:54581402]	.	PASS	SVTYPE=BND;MATEID=r_76_1	TR:VR	84:6	33:0
chr16	54581402	r_76_1	T	T]chr13:112734458]	.	PASS	SVTYPE=BND;MATEID=r_76_0	TR:VR	84:6	33:0
chr19	30403322	r_154_0	A	]chr4:88055043]C	.	Too_low_VAF	SVTYPE=BND;MATEID=r_154_1	TR:VR	550:7	36:0
chr4	88055043	r_154_1	C	C[chr19:30403322[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_154_0	TR:VR	550:7	36:0
chr2	191931783	r_172_0	C	C]chr2:216596136]	.	PASS	SVTYPE=BND;MATEID=r_172_1	TR:VR	44:3	25:0
chr2	216596136	r_172_1	T	T]chr2:191931783]	.	PASS	SVTYPE=BND;MATEID=r_172_0	TR:VR	44:3	25:0
chr21	29448847	d_1097	G	<DEL>	.	Too_small_size	END=29448883;SVTYPE=DEL;SVLEN=-36	TR:VR	44:6	24:0
chr4	166305058	r_262_0	C	C]chr4:167188347]	.	PASS	SVTYPE=BND;MATEID=r_262_1	TR:VR	94:21	55:0
chr4	167188347	r_262_1	C	C]chr4:166305058]	.	PASS	SVTYPE=BND;MATEID=r_262_0	TR:VR	94:21	55:0
chr4	55533690	r_251_0	G	G]chr4:55539611]	.	PASS	SVTYPE=BND;MATEID=r_251_1	TR:VR	92:11	37:0
chr4	55539611	r_251_1	A	A]chr4:55533690]	.	PASS	SVTYPE=BND;MATEID=r_251_0	TR:VR	92:11	37:0
chr5	135755008	d_1298	A	<INS>	.	PASS	END=135754991;SVTYPE=INS;SVINSLEN=104;SVINSSEQ=TTGCAGTGATATTTATAATATCCAGTGTTTATACACAGTGCTTACACACTGTGATATTAATGAAATATTGCAGCGTTATTTATGATACCCAGTGTTTACACACT	TR:VR	29:4	24:0
chr6	39281139	i_1004	G	<INS>	.	Too_low_VAF	END=39281142;SVTYPE=INS;SVINSLEN=79;SVINSSEQ=CGTCTCCCCTCAGACTAGGGTTCCCCTGAGGAGAGGGCCACGTCTCCCCCTCAGACTGGGGCTCCCTGAGGAGAGGGGC	TR:VR	128:4	15:0
chr6	91923586	r_326_0	A	[chr8:3917894[A	.	PASS	SVTYPE=BND;MATEID=r_326_1	TR:VR	56:9	51:0
chr8	3917894	r_326_1	A	[chr6:91923586[A	.	PASS	SVTYPE=BND;MATEID=r_326_0	TR:VR	56:9	51:0
chr9	40924627	i_1150	T	<INS>	.	Too_low_VAF	END=40924638;SVTYPE=INS;SVINSLEN=112;SVINSSEQ=GCAGAACACTGCTACGACGGTCTGAATTTTTGTCCCTCACACGGAATTCCAGAACACTGACTGCTACAAGGGTCTGAATGATTGACCCTCACAAAGGTTTCCAGAACACAGC	TR:VR	134:3	83:0
chr1	206645457	r_28_0	A	]chr8:143433528]AAGATGTGTGCTTT	.	PASS	SVTYPE=BND;MATEID=r_28_1;SVINSLEN=13;SVINSSEQ=AAGATGTGTGCTT	TR:VR	101:12	42:0
chr8	143433528	r_28_1	T	TAAGCACACATCTT[chr1:206645457[	.	PASS	SVTYPE=BND;MATEID=r_28_0;SVINSLEN=13;SVINSSEQ=AAGCACACATCTT	TR:VR	101:12	42:0
chr10	24383428	d_343	G	<DEL>	.	Too_small_size	END=24383470;SVTYPE=DEL;SVLEN=-42	TR:VR	44:16	12:0
chr13	113198624	d_438	G	<DEL>	.	PASS	END=113200775;SVTYPE=DEL;SVLEN=-2151	TR:VR	23:4	24:0
chr16	31233885	d_617	G	<DEL>	.	PASS	END=31233998;SVTYPE=DEL;SVLEN=-113	TR:VR	54:13	19:0
chr2	192197350	r_173	G	<DUP>	.	PASS	END=195725617;SVTYPE=DUP;SVLEN=3528267	TR:VR	57:7	40:0
chr4	166612413	r_263_0	C	[chr4:167498135[A	.	PASS	SVTYPE=BND;MATEID=r_263_1	TR:VR	57:10	43:0
chr4	167498135	r_263_1	A	[chr4:166612413[A	.	PASS	SVTYPE=BND;MATEID=r_263_0	TR:VR	57:10	43:0
chr6	40453972	r_291_0	T	T]chr6:40483526]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_291_1	TR:VR	208:3	49:0
chr6	40483526	r_291_1	C	C]chr6:40453972]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_291_0	TR:VR	208:3	49:0
chr6	95241353	r_327	G	<DEL>	.	PASS	END=95283376;SVTYPE=DEL;SVLEN=-42023	TR:VR	74:8	39:0
chr8	4636376	d_1414	T	<DEL>	.	PASS	END=4639290;SVTYPE=DEL;SVLEN=-2914	TR:VR	35:7	18:0
chr1	143259878	d_253	T	<DEL>	.	Too_low_VAF	END=143260267;SVTYPE=DEL;SVLEN=-389	TR:VR	308:9	121:1
chr16	33336261	i_349	T	<INS>	.	Too_low_VAF	END=33336261;SVTYPE=INS;SVINSLEN=408;SVINSSEQ=GTGTGGCTTTGGCTGGGTGGCTTGGCTGGCTTGGCTGGCTGGCTTGTCTGGCTGGCTGGCTGGCTTGGGTGGCTTGGCTGGCTGGCTGGCTTGGCTGGCTTGGCTGGCTTGGCTGGCTGGGCCGCTTGGCTGGCTGCCTGGCTGGCTTGGCTGGTTTAGCTGGCTGACTGGCTGGCTTGACTGCCTGGCTGGCTTTGGCTGGGTGGCTTGGCTGGCTTGGCTGGCTGGGTGGCTTGGCTGGCTTGGATGGCTTGGCTGGCTTGGCCGGCTGTGCTGGCTTGGCTGGCTTGGCTGGCTGGCTTGAATGGGTGGCTTGGCTGGCTGGCTGGCTTGGCTGGCTTGGCTGGCTGGATGGCTTGGCTGGCTTGGCCTGGCTGGCTGGCTTGGCTGGCTTTGCCGGCTGGGTGG	TR:VR	173:7	84:1
chr17	2948742	i_445	G	<INS>	.	PASS	END=2948742;SVTYPE=INS;SVINSLEN=137;SVINSSEQ=GCTGCCTGTCTGCAGGAGAAGCTGTGCCTGTGTGTAGAGCTGCTGTGGACCAGGGGGAGGCAGGAGGGCACAGGGTGGTGATGAGATGGAGAGAAGGGGTCCTGGACTCGGGTGCAACAAGAGGGAAGGAACAGGTG	TR:VR	22:12	9:0
chr2	192207269	r_174_0	A	A]chr4:166464576]	.	PASS	SVTYPE=BND;MATEID=r_174_1	TR:VR	54:6	28:0
chr4	166464576	r_174_1	T	T]chr2:192207269]	.	PASS	SVTYPE=BND;MATEID=r_174_0	TR:VR	54:6	28:0
chr3	112626340	r_220_0	A	[chr3:112630933[G	.	PASS	SVTYPE=BND;MATEID=r_220_1	TR:VR	44:5	24:0
chr3	112630933	r_220_1	G	[chr3:112626340[G	.	PASS	SVTYPE=BND;MATEID=r_220_0	TR:VR	44:5	24:0
chr5	57443331	r_271	G	<DUP>	.	PASS	END=57580368;SVTYPE=DUP;SVLEN=137037	TR:VR	73:4	40:0
chr6	95260127	r_328	T	<DUP>	.	PASS	END=119381734;SVTYPE=DUP;SVLEN=24121607	TR:VR	69:14	53:0
chr8	106295058	r_362	G	<DEL>	.	PASS	END=106633648;SVTYPE=DEL;SVLEN=-338590	TR:VR	89:9	34:0
chrX	1588298	d_1526	C	<INS>	.	Too_small_size;Too_low_VAF	END=1588283;SVTYPE=INS;SVINSLEN=0;SVINSSEQ=	TR:VR	307:3	177:0
chr1	143259893	d_254	T	<DEL>	.	Too_low_VAF	END=143260076;SVTYPE=DEL;SVLEN=-183	TR:VR	306:9	120:1
chr17	2948805	i_446	G	<INS>	.	PASS	END=2948805;SVTYPE=INS;SVINSLEN=143;SVINSSEQ=GGAGGGCACAGGGTGGTGATGAGATGGAGAGAAGGGGTCCTGGACTCGGGTGCAACAAGAGGGAAGGAACAGGTGGCTGCCTGTCTGCAGGAGAAGCTGTGCCTGTGTGTGGGAGCTGTGTTGGACCAGGGGGAGGCAGGGAG	TR:VR	22:3	9:0
chr2	192214632	r_175_0	T	[chr4:166305071[A	.	Too_low_VAF	SVTYPE=BND;MATEID=r_175_1	TR:VR	82:4	59:0
chr4	166305071	r_175_1	A	[chr2:192214632[A	.	Too_low_VAF	SVTYPE=BND;MATEID=r_175_0	TR:VR	82:4	59:0
chr3	112673584	r_221	A	<DEL>	.	PASS	END=113221047;SVTYPE=DEL;SVLEN=-547463	TR:VR	86:10	43:0
chr6	42853695	d_1323	A	<DEL>	.	Too_low_VAF	END=42855358;SVTYPE=DEL;SVLEN=-1663	TR:VR	135:3	23:0
chr6	95283189	r_329_0	G	G]chr6:120181614]	.	PASS	SVTYPE=BND;MATEID=r_329_1	TR:VR	69:10	43:0
chr6	120181614	r_329_1	G	G]chr6:95283189]	.	PASS	SVTYPE=BND;MATEID=r_329_0	TR:VR	69:10	43:0
chr10	6825146	r_42_0	A	AGGAAACAGACATTTGTAGAATCTGCAGAGGGATATTCCTGAGTGGTTTGAGTCCTGTTATGAAAAAGAAATATCTTCACATAAAAACTAGACAGAAGCATTCTGAGAAACTTCTTTGTGATGCGTGCATT[chr12:37735985[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_42_1;SVINSLEN=130;SVINSSEQ=GGAAACAGACATTTGTAGAATCTGCAGAGGGATATTCCTGAGTGGTTTGAGTCCTGTTATGAAAAAGAAATATCTTCACATAAAAACTAGACAGAAGCATTCTGAGAAACTTCTTTGTGATGCGTGCATT	TR:VR	93:4	43:0
chr12	37735985	r_42_1	C	]chr10:6825146]AATGCACGCATCACAAAGAAGTTTCTCAGAATGCTTCTGTCTAGTTTTTATGTGAAGATATTTCTTTTTCATAACAGGACTCAAACCACTCAGGAATATCCCTCTGCAGATTCTACAAATGTCTGTTTCCC	.	Too_low_VAF	SVTYPE=BND;MATEID=r_42_0;SVINSLEN=130;SVINSSEQ=AATGCACGCATCACAAAGAAGTTTCTCAGAATGCTTCTGTCTAGTTTTTATGTGAAGATATTTCTTTTTCATAACAGGACTCAAACCACTCAGGAATATCCCTCTGCAGATTCTACAAATGTCTGTTTCC	TR:VR	93:4	43:0
chr16	88001147	d_779	C	<INS>	.	PASS	END=88001128;SVTYPE=INS;SVINSLEN=139;SVINSSEQ=TTACCTGTCCTTCCAGACACCCAGACACGTCTCCATGCATGCACGTGCGCGGCTGGACTCACCTGTCCTTCCAGACACGTCTCCATGCCCGCACGTGCGCGGCTGGACTCACCTGTCCTTCCAGACACGTCTCCATGCA	TR:VR	55:9	24:0
chr19	30479258	r_155_0	C	CAA]chr19:30480311]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_155_1;SVINSLEN=2;SVINSSEQ=AA	TR:VR	278:3	18:0
chr19	30480311	r_155_1	T	TTT]chr19:30479258]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_155_0;SVINSLEN=2;SVINSSEQ=TT	TR:VR	278:3	18:0
chr6	43008755	r_293_0	C	CGG]chr6:43041400]	.	PASS	SVTYPE=BND;MATEID=r_293_1;SVINSLEN=2;SVINSSEQ=GG	TR:VR	218:13	36:0
chr6	43041400	r_293_1	G	GCC]chr6:43008755]	.	PASS	SVTYPE=BND;MATEID=r_293_0;SVINSLEN=2;SVINSSEQ=CC	TR:VR	218:13	36:0
chr7	100743425	d_1382	C	<DEL>	.	PASS	END=100743501;SVTYPE=DEL;SVLEN=-76	TR:VR	33:7	18:0
chr8	46764144	r_349	C	<DEL>	.	PASS	END=46791349;SVTYPE=DEL;SVLEN=-27205	TR:VR	89:10	43:0
chr1	143259935	d_255	G	<DEL>	.	Too_low_VAF	END=143260180;SVTYPE=DEL;SVLEN=-245;SVINSLEN=22;SVINSSEQ=AATGGAATGGAACAGTCAATGA	TR:VR	307:8	119:1
chr10	27486966	r_46_0	A	AAAA]chr12:11139787]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_46_1;SVINSLEN=3;SVINSSEQ=AAA	TR:VR	81:3	33:0
chr12	11139787	r_46_1	T	TTTT]chr10:27486966]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_46_0;SVINSLEN=3;SVINSSEQ=TTT	TR:VR	81:3	33:0
chr10	68828972	r_49_0	A	A]chr12:54037703]	.	PASS	SVTYPE=BND;MATEID=r_49_1	TR:VR	84:12	53:0
chr12	54037703	r_49_1	G	G]chr10:68828972]	.	PASS	SVTYPE=BND;MATEID=r_49_0	TR:VR	84:12	53:0
chr2	195569291	r_176_0	A	AAAAAAAAAAAAAAAAG]chr7:5813756]	.	PASS	SVTYPE=BND;MATEID=r_176_1;SVINSLEN=16;SVINSSEQ=AAAAAAAAAAAAAAAG	TR:VR	50:6	46:1
chr7	5813756	r_176_1	T	TCTTTTTTTTTTTTTTT]chr2:195569291]	.	PASS	SVTYPE=BND;MATEID=r_176_0;SVINSLEN=16;SVINSSEQ=CTTTTTTTTTTTTTTT	TR:VR	50:6	46:1
chr4	6300713	r_233_0	G	G]chr4:10403937]	.	PASS	SVTYPE=BND;MATEID=r_233_1	TR:VR	60:16	34:0
chr4	10403937	r_233_1	C	C]chr4:6300713]	.	PASS	SVTYPE=BND;MATEID=r_233_0	TR:VR	60:16	34:0
chr6	43041135	r_294	A	<DUP>	.	PASS	END=43185897;SVTYPE=DUP;SVLEN=144762	TR:VR	216:13	43:0
chr10	306755	r_38_0	G	G[chr2:241932224[	.	PASS	SVTYPE=BND;MATEID=r_38_1	TR:VR	65:4	48:0
chr2	241932224	r_38_1	T	]chr10:306755]T	.	PASS	SVTYPE=BND;MATEID=r_38_0	TR:VR	65:4	48:0
chr12	113150065	d_425	A	<DEL>	.	PASS	END=113153245;SVTYPE=DEL;SVLEN=-3180	TR:VR	27:9	23:0
chr17	304909	i_405	G	<INS>	.	PASS	END=304909;SVTYPE=INS;SVINSLEN=161;SVINSSEQ=GGCGAGAGGGGGACAGGGCGAGAGGGGGACAGGGCGGGAGGGGGACAGGGCGGGAGGGGGACAGGGCGAGAGGGGGACAGGGCGAGAGGGGACAGGGCGAGAGGGGGACAGGGCGGGGGGAGGGGGACAGGGCGGGAGGGGGACAGGGCGGGAGGGGGACA	TR:VR	37:4	16:0
chr19	30480306	r_156_0	C	CAA]chr19:30480311]	.	PASS	SVTYPE=BND;MATEID=r_156_1;SVINSLEN=2;SVINSSEQ=AA	TR:VR	254:178	17:0
chr19	30480311	r_156_1	T	TTT]chr19:30480306]	.	PASS	SVTYPE=BND;MATEID=r_156_0;SVINSLEN=2;SVINSSEQ=TT	TR:VR	254:178	17:0
chr2	195725640	r_177_0	G	[chr2:195831475[A	.	PASS	SVTYPE=BND;MATEID=r_177_1	TR:VR	58:9	38:0
chr2	195831475	r_177_1	A	[chr2:195725640[A	.	PASS	SVTYPE=BND;MATEID=r_177_0	TR:VR	58:9	38:0
chr20	337336	d_1042	T	<DEL>	.	Too_small_size	END=337371;SVTYPE=DEL;SVLEN=-35	TR:VR	27:6	20:0
chr22	37736575	r_208	C	<DUP>	.	PASS	END=37920152;SVTYPE=DUP;SVLEN=183577	TR:VR	76:6	38:0
chr6	43077369	r_295_0	G	[chr6:43078524[T	.	PASS	SVTYPE=BND;MATEID=r_295_1	TR:VR	109:6	19:0
chr6	43078524	r_295_1	T	[chr6:43077369[T	.	PASS	SVTYPE=BND;MATEID=r_295_0	TR:VR	109:6	19:0
chrX	1588449	d_1529	T	<DEL>	.	Too_low_VAF	END=1588533;SVTYPE=DEL;SVLEN=-84;SVINSLEN=3;SVINSSEQ=CTC	TR:VR	305:4	174:1
chr10	73159294	r_50_0	G	G[chr14:18639679[	.	PASS	SVTYPE=BND;MATEID=r_50_1	TR:VR	74:6	44:0
chr14	18639679	r_50_1	A	]chr10:73159294]A	.	PASS	SVTYPE=BND;MATEID=r_50_0	TR:VR	74:6	44:0
chr12	118640274	i_250	T	<INS>	.	PASS	END=118640274;SVTYPE=INS;SVINSLEN=219;SVINSSEQ=AAAAACATTCACCTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCAAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAATAACAATAAAATGAGATAAAATCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	TR:VR	26:9	23:0
chr14_GL000225v1_random	98216	d_543	A	<DEL>	.	Too_low_VAF	END=98342;SVTYPE=DEL;SVLEN=-126;SVINSLEN=56;SVINSSEQ=GTGACACCAAAGATGGAATCCTTGTCTATATCTGCCTACTGGGTGGCATTGTGGGA	TR:VR	689:7	673:1
chr2	95932365	i_681	A	<INS>	.	Too_low_VAF	END=95932368;SVTYPE=INS;SVINSLEN=66;SVINSSEQ=TAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	TR:VR	125:3	93:0
chr4	6741395	r_235	T	<DUP>	.	PASS	END=8636301;SVTYPE=DUP;SVLEN=1894906;SVINSLEN=21;SVINSSEQ=AAAAAAAAAAAAAAAAAAAAA	TR:VR	80:9	47:0
chr6	43186109	r_296	T	<DEL>	.	Too_low_VAF	END=52830090;SVTYPE=DEL;SVLEN=-9643981	TR:VR	168:3	42:0
chr1	143274166	r_14_0	G	]chr6:146668751]TGGAATCAACATCGAATGGAATCAAATGGAAACACCATCGAAGTGAAACGAATGGAATTATCATGAAATTGAAATGGATGGACTCATCATCGAATGGATTTGAATGGAATCACCGAATTACATTGATTGAAATCATCATCAAATGGAATCGAATGGAATTATTA	.	Too_low_VAF	SVTYPE=BND;MATEID=r_14_1;SVINSLEN=163;SVINSSEQ=TGGAATCAACATCGAATGGAATCAAATGGAAACACCATCGAAGTGAAACGAATGGAATTATCATGAAATTGAAATGGATGGACTCATCATCGAATGGATTTGAATGGAATCACCGAATTACATTGATTGAAATCATCATCAAATGGAATCGAATGGAATTATT	TR:VR	128:6	55:0
chr6	146668751	r_14_1	A	AAATAATTCCATTCGATTCCATTTGATGATGATTTCAATCAATGTAATTCGGTGATTCCATTCAAATCCATTCGATGATGAGTCCATCCATTTCAATTTCATGATAATTCCATTCGTTTCACTTCGATGGTGTTTCCATTTGATTCCATTCGATGTTGATTCCA[chr1:143274166[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_14_0;SVINSLEN=163;SVINSSEQ=AATAATTCCATTCGATTCCATTTGATGATGATTTCAATCAATGTAATTCGGTGATTCCATTCAAATCCATTCGATGATGAGTCCATCCATTTCAATTTCATGATAATTCCATTCGTTTCACTTCGATGGTGTTTCCATTTGATTCCATTCGATGTTGATTCCA	TR:VR	128:6	55:0
chr12	123452829	i_251	T	<INS>	.	PASS	END=123452829;SVTYPE=INS;SVINSLEN=495;SVINSSEQ=ATATAAATATATATATATATATATATATATAAATATATATAAATATATATATAAATATATATATATATATAAATATATATAAATATATATAAAAATATATAAATATATATATATATATATATAAATATATATAAATATATATATAAATATATATAAATATATATATATATATAAATATATATATAAATATATATAAATATATATAAATATATATAAATATATATATAAATATATATAAATATATATAAATATATATATAAATATATATAAATATATATAAATATATATAAATATATATAAATATATATAAATATATATAAATATATATATAAATATATATAAATATATATAAAAATATATATAAATATATATATATATATATATATAAATATATATAAATATATATATAAATATATATAAATATATATATAAATATATAAATATATATAAATATATATAAATATATATAAAAATATATATAAATATATATAAATA	TR:VR	30:4	7:0
chr14_GL000225v1_random	98400	d_544	C	<DEL>	.	Too_low_VAF	END=101311;SVTYPE=DEL;SVLEN=-2911;SVINSLEN=14;SVINSSEQ=TTTGTGACATATGT	TR:VR	763:3	733:1
chr19	31724668	d_883	A	<DEL>	.	PASS	END=31729166;SVTYPE=DEL;SVLEN=-4498	TR:VR	48:5	20:0
chr2	9648921	d_925	A	<DEL>	.	Too_small_size	END=9648967;SVTYPE=DEL;SVLEN=-46	TR:VR	42:5	21:0
chr22	38412847	d_1129	G	<DEL>	.	PASS	END=38412965;SVTYPE=DEL;SVLEN=-118	TR:VR	38:11	22:0
chr4	68387506	r_252	G	<DEL>	.	PASS	END=68408397;SVTYPE=DEL;SVLEN=-20891	TR:VR	41:7	42:0
chr5	138615086	r_272	G	<DEL>	.	PASS	END=139132481;SVTYPE=DEL;SVLEN=-517395	TR:VR	46:3	46:0
chr9	61664725	d_1449	C	<DEL>	.	PASS	END=61665831;SVTYPE=DEL;SVLEN=-1106	TR:VR	85:9	33:0
chr16	34576258	d_621	A	<DEL>	.	Too_low_VAF	END=34576395;SVTYPE=DEL;SVLEN=-137;SVINSLEN=42;SVINSSEQ=ATCAAAGGCAATCATGGTCGAATGGAATCAAATGGAAACATC	TR:VR	440:3	166:1
chr2	87409870	d_938	G	<DEL>	.	Too_small_size;Too_low_VAF	END=87409893;SVTYPE=DEL;SVLEN=-23	TR:VR	112:4	75:1
chr3	133340562	i_858	T	<INS>	.	PASS	END=133340562;SVTYPE=INS;SVINSLEN=380;SVINSSEQ=AGAGGGCTGATATGGTTTGGTTCTGTGTCCCCACCCAAATCTCATCTCAAACTGTAATTCCCATAATCCCCATGTGTCAAGGGAGACACATGGTGGGAGTGCTTATTGGATCCTGGGGGCAGTTTCCCCCATGCTGTTCTTGTGATAGTGAGTAAGTCCTCATGACAGCTGATGGTTTTATAAGTGTTTGACAGTTCCTCCTTCATACATGCTTCTCTCTTGCCTGCTGCCACATAAGACATGCCTGCCTCCTCTTCCACCGTGATTCTAAATTTCCTGAGGCCTCCCCAGCCATGCAGAACTGTGAGTCAATTAAACCTCTTTTCTTTATAAATTAGTCAGTCTCAGGTTTTTCTTATAGTAGTGTGAGAACAGACTAA	TR:VR	43:3	21:0
chr5	138923561	d_1306	G	<DEL>	.	Too_small_size	END=138923597;SVTYPE=DEL;SVLEN=-36	TR:VR	12:5	25:0
chr5	7037599	r_266	G	<DUP>	.	Too_low_VAF	END=7193425;SVTYPE=DUP;SVLEN=155826;SVINSLEN=20;SVINSSEQ=CACACACACACACACACACA	TR:VR	104:4	46:0
chr8	115482571	r_363	G	<DEL>	.	PASS	END=115525522;SVTYPE=DEL;SVLEN=-42951	TR:VR	103:15	41:0
chr8	52646112	r_350_0	T	T]chr8:68213422]	.	PASS	SVTYPE=BND;MATEID=r_350_1	TR:VR	144:8	38:0
chr8	68213422	r_350_1	C	C]chr8:52646112]	.	PASS	SVTYPE=BND;MATEID=r_350_0	TR:VR	144:8	38:0
chr1	31031849	r_2_0	T	[chr1:31077321[A	.	PASS	SVTYPE=BND;MATEID=r_2_1	TR:VR	59:3	32:0
chr1	31077321	r_2_1	A	[chr1:31031849[A	.	PASS	SVTYPE=BND;MATEID=r_2_0	TR:VR	59:3	32:0
chr10	3411147	r_40	A	<DUP>	.	PASS	END=3411411;SVTYPE=DUP;SVLEN=264;SVINSLEN=14;SVINSSEQ=CAGGAGAGATCACT	TR:VR	40:7	20:0
chr13	114186723	r_77_0	G	G[chr4:32715672[	.	PASS	SVTYPE=BND;MATEID=r_77_1	TR:VR	66:4	38:0
chr4	32715672	r_77_1	T	]chr13:114186723]T	.	PASS	SVTYPE=BND;MATEID=r_77_0	TR:VR	66:4	38:0
chr3	145403211	r_224	C	<DEL>	.	PASS	END=145419171;SVTYPE=DEL;SVLEN=-15960;SVINSLEN=7;SVINSSEQ=TTCTTTG	TR:VR	63:10	25:0
chr5	140365757	r_273_0	T	[chr5:140373127[G	.	PASS	SVTYPE=BND;MATEID=r_273_1	TR:VR	55:7	16:0
chr5	140373127	r_273_1	G	[chr5:140365757[G	.	PASS	SVTYPE=BND;MATEID=r_273_0	TR:VR	55:7	16:0
chr6	44044635	d_1325	T	<DEL>	.	Too_low_VAF	END=44044670;SVTYPE=DEL;SVLEN=-35;SVINSLEN=23;SVINSSEQ=ATACACCTTTACACACACATTCA	TR:VR	118:5	20:0
chr8	115513267	r_364	A	<DEL>	.	PASS	END=115573684;SVTYPE=DEL;SVLEN=-60417	TR:VR	104:6	40:0
chr1	212254574	r_29	A	<DUP>	.	PASS	END=213485522;SVTYPE=DUP;SVLEN=1230948	TR:VR	177:10	36:0
chr1	32050726	r_3	G	<DEL>	.	PASS	END=32767731;SVTYPE=DEL;SVLEN=-717005	TR:VR	60:12	35:0
chr10	34447461	d_344	A	<DEL>	.	PASS	END=34447735;SVTYPE=DEL;SVLEN=-274	TR:VR	45:5	17:0
chr4	7311987	r_236	T	<DEL>	.	PASS	END=10673765;SVTYPE=DEL;SVLEN=-3361778	TR:VR	78:27	45:0
chr5	144951450	r_274_0	T	TTTTTTTTTTTTTT[chr6:113605763[	.	PASS	SVTYPE=BND;MATEID=r_274_1;SVINSLEN=13;SVINSSEQ=TTTTTTTTTTTTT	TR:VR	84:5	41:0
chr6	113605763	r_274_1	T	]chr5:144951450]AAAAAAAAAAAAAT	.	PASS	SVTYPE=BND;MATEID=r_274_0;SVINSLEN=13;SVINSSEQ=AAAAAAAAAAAAA	TR:VR	84:5	41:0
chr6	44573412	r_297	C	<DEL>	.	PASS	END=51868668;SVTYPE=DEL;SVLEN=-7295256	TR:VR	161:19	69:0
chr8	115579591	r_365	T	<DEL>	.	PASS	END=115656706;SVTYPE=DEL;SVLEN=-77115	TR:VR	122:8	44:0
chr8	55911228	i_1122	C	<INS>	.	Too_small_size	END=55911229;SVTYPE=INS;SVINSLEN=42;SVINSSEQ=GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	TR:VR	40:8	17:0
chr16	34576404	i_355	G	<INS>	.	Too_low_VAF	END=34576404;SVTYPE=INS;SVINSLEN=439;SVINSSEQ=AATAGAATGGAGTGATCGAATGGAATCGATGGCAATCATCATCCACTGGAATCAAATGGAATCATTGAATGGAATCGAATGGAATCAATGTCAAGTGGAATCGAGTGGAATCATCGAAAGAAATCGAATGGAATCATTGTCGAATGGAATGGAATGGAATCAAAGAATTGAATTGAATAGAATCACCAATGAATTGAATCGAATGGAATCCTCATCGAATGGAATCGAAGGGAATCATTGGATGGGCTCAAATAGTATCATCATCTAATGGACTCATGTGGAATCATCTAAGGGACACAAATGGAATCATCATTGAATGGAATTGAATGGAATCATCTAATGTACTCGAATGGAATCACCATTGAATAGAATAGAATGGAATCACTGAATGGAATCAAATGGAATCATCAAATGGAATTGAGTGGAATCATCGTATGGA	TR:VR	428:4	161:1
chr4	186436656	i_910	G	<INS>	.	PASS	END=186436657;SVTYPE=INS;SVINSLEN=287;SVINSSEQ=CCGCACCCACACGACATTACCCACCCATAACCATCATACTTCCTAACGCCCCACACACGACATTACCCACCCATAACCATCATACTTCCTAACGCCCCACACACGACATTACCCACCCATAACCATCATAGCAACTTCCTAACGCCCCACACACGACTATTACCCACCCATAACCACCGTACTTCCTAACGCCCCACATGAACATTGCACCCACCCATAACCATCTATACTTCCTAACGCTGCACACACGACATTACCCACCCATAAGTATCATACTACCTCACGCT	TR:VR	40:6	21:0
chr4	7363243	r_237_0	A	A]chr4:10524470]	.	PASS	SVTYPE=BND;MATEID=r_237_1	TR:VR	75:21	49:0
chr4	10524470	r_237_1	G	G]chr4:7363243]	.	PASS	SVTYPE=BND;MATEID=r_237_0	TR:VR	75:21	49:0
chr8	115607639	r_366	T	<DUP>	.	PASS	END=115696327;SVTYPE=DUP;SVLEN=88688;SVINSLEN=23;SVINSSEQ=GACTATGTATGTATGAATATGTA	TR:VR	140:20	40:0
chr8	59621051	i_1123	T	<INS>	.	PASS	END=59621051;SVTYPE=INS;SVINSLEN=120;SVINSSEQ=TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCATTGCAAATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGT	TR:VR	44:25	21:0
chr13	21243054	r_67_0	T	TATTTTTTATTT]chrX:65384526]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_67_1;SVINSLEN=11;SVINSSEQ=ATTTTTTATTT	TR:VR	125:3	97:0
chrX	65384526	r_67_1	T	TAAATAAAAAAT]chr13:21243054]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_67_0;SVINSLEN=11;SVINSSEQ=AAATAAAAAAT	TR:VR	125:3	97:0
chr19	10499855	r_131	G	<DEL>	.	PASS	END=10650597;SVTYPE=DEL;SVLEN=-150742	TR:VR	46:8	33:0
chr2	219613773	d_1032	G	<DEL>	.	PASS	END=219614306;SVTYPE=DEL;SVLEN=-533	TR:VR	32:4	12:0
chr20	46789480	i_731	T	<INS>	.	PASS	END=46789495;SVTYPE=INS;SVINSLEN=120;SVINSSEQ=TGGATGTGTGTGTGGGTGTGCAGGTGTGTGTTTATTGGATGTGAGTGTGTGGGTGTGCAGGTGTGTGTTTATTGGATGTGTGTGTGGGTGTGCAGGTGTGTGTTTATTGCATGTGAGTGT	TR:VR	50:4	20:0
chr21	43902984	d_1103	G	<DEL>	.	PASS	END=43909545;SVTYPE=DEL;SVLEN=-6561;SVINSLEN=5;SVINSSEQ=GCACT	TR:VR	44:5	26:0
chr22	40884562	r_209	G	<DEL>	.	PASS	END=41540505;SVTYPE=DEL;SVLEN=-655943;SVINSLEN=3;SVINSSEQ=GCC	TR:VR	71:9	34:0
chr3	72732864	r_214	A	<DEL>	.	PASS	END=72745822;SVTYPE=DEL;SVLEN=-12958	TR:VR	72:12	33:0
chr4	7363271	r_238_0	C	[chr4:10399879[T	.	PASS	SVTYPE=BND;MATEID=r_238_1	TR:VR	82:15	42:0
chr4	10399879	r_238_1	T	[chr4:7363271[T	.	PASS	SVTYPE=BND;MATEID=r_238_0	TR:VR	82:15	42:0
chr5	151505216	r_275	C	<DUP>	.	PASS	END=151861159;SVTYPE=DUP;SVLEN=355943	TR:VR	77:5	36:0
chr6	45223038	r_298	G	<DEL>	.	Too_low_VAF	END=50597346;SVTYPE=DEL;SVLEN=-5374308	TR:VR	157:5	37:0
chr1	35739572	r_4	T	<DUP>	.	PASS	END=35743261;SVTYPE=DUP;SVLEN=3689	TR:VR	55:6	17:0
chr5	155032022	i_978	A	<INS>	.	PASS	END=155032022;SVTYPE=INS;SVINSLEN=91;SVINSSEQ=TATTATATATGTGTATATATAATATATAATATATATATATATGATATATATATATATATAATATATATGATATATAATATAATATATATGT	TR:VR	31:3	19:0
chr6	49012121	r_299_0	T	[chr6:50071968[T	.	Too_low_VAF	SVTYPE=BND;MATEID=r_299_1	TR:VR	168:8	42:0
chr6	50071968	r_299_1	T	[chr6:49012121[T	.	Too_low_VAF	SVTYPE=BND;MATEID=r_299_0	TR:VR	168:8	42:0
chr8	63916452	d_1423	C	<DEL>	.	PASS	END=63919155;SVTYPE=DEL;SVLEN=-2703	TR:VR	57:8	17:0
chr9	6741265	r_371	C	<DUP>	.	PASS	END=6778814;SVTYPE=DUP;SVLEN=37549	TR:VR	86:6	30:0
chr13	30552799	d_430	A	<DEL>	.	PASS	END=30552903;SVTYPE=DEL;SVLEN=-104	TR:VR	22:5	20:0
chr3	176220670	r_225_0	A	A[chr7:11838317[	.	PASS	SVTYPE=BND;MATEID=r_225_1	TR:VR	107:10	52:0
chr7	11838317	r_225_1	T	]chr3:176220670]T	.	PASS	SVTYPE=BND;MATEID=r_225_0	TR:VR	107:10	52:0
chr6	49027915	r_300_0	T	T]chr6:50110923]	.	PASS	SVTYPE=BND;MATEID=r_300_1	TR:VR	140:7	42:0
chr6	50110923	r_300_1	C	C]chr6:49027915]	.	PASS	SVTYPE=BND;MATEID=r_300_0	TR:VR	140:7	42:0
chr7	26410483	i_1044	T	<INS>	.	PASS	END=26410483;SVTYPE=INS;SVINSLEN=777;SVINSSEQ=AAGAATGATTTGCCACGTAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	TR:VR	33:10	9:0
chr8	66247527	r_351_0	A	[chr8:66248639[AAAAAATTTT	.	PASS	SVTYPE=BND;MATEID=r_351_1;SVINSLEN=9;SVINSSEQ=AAAAAATTT	TR:VR	92:26	16:0
chr8	66248639	r_351_1	T	[chr8:66247527[AAATTTTTTT	.	PASS	SVTYPE=BND;MATEID=r_351_0;SVINSLEN=9;SVINSSEQ=AAATTTTTT	TR:VR	92:26	16:0
chr1	212806764	i_89	A	<INS>	.	Too_small_size;Too_low_VAF	END=212806783;SVTYPE=INS;SVINSLEN=28;SVINSSEQ=CACACACACACACACACACACACACACA	TR:VR	108:5	16:0
chr18	108982	i_481	G	<INS>	.	Too_low_VAF	END=109001;SVTYPE=INS;SVINSLEN=153;SVINSSEQ=GGACTCTTGTCTTGGATCTGCCTATGGGGGCATAATGACATATCTCAGCACTGATCACTCATATGATGTAACGCTTGTCTAAGCTGCGCCAAAAGGTGAATTGGAAAGATATCTCCATTGATCACCCAGGCTAACAATTTTCTGGTGTTTGTC	TR:VR	253:4	228:0
chr20	21558522	r_179	T	<DEL>	.	PASS	END=21611052;SVTYPE=DEL;SVLEN=-52530	TR:VR	43:7	51:0
chr21	45776870	r_205	A	<DEL>	.	PASS	END=45885676;SVTYPE=DEL;SVLEN=-108806;SVINSLEN=24;SVINSSEQ=TTATATGATTATATGATTATATGA	TR:VR	69:6	42:0
chr7	28336810	i_1045	A	<INS>	.	PASS	END=28336825;SVTYPE=INS;SVINSLEN=501;SVINSSEQ=TTGGTGTAGGCACTTGAAGAGAGCCGGCAAAGGGATCATGACCAACTCAACATTCCAATGGAGGGTATATGATCAAACAGCAAACTGTTTATCATGAATGCAGGATGTGGGCAAACTTATGACTGCGCCTGCCACCAGAAGGTTTGCTGAAGGCAATCACTCCCTGGTGCCGTGCTCGTTGAGGTTATCTACTGGGACGTCTATAGCCTATTGTTTGAAGAATGCAATCTTGCAAGCCTGCTGTAAATCAAACTGCCGACTGATAGTCACCCAACGATCACCTCCTCTTCTTGCTATCTCTTTTACCGAATAAATATGGAGGACTGAAGAAGCTTAGGGCCCTTGTTAACTTGAAGCAAGGAGTCCCCTGACCCTTCTTCCAAATATACTCTTTTGTCTTTGTCTTTATTCCCATGTTTGTCATCCTTTGTTCAGTCCCCCAAGGTCCGTGCAGGTGGCAAAGTGGTGCCCAAACAGGGACTTGAGGACATCGGCAGGCAC	TR:VR	43:5	26:0
chr8	66614232	r_352_0	T	[chr8:66914416[A	.	Too_low_VAF	SVTYPE=BND;MATEID=r_352_1	TR:VR	204:7	33:0
chr8	66914416	r_352_1	A	[chr8:66614232[A	.	Too_low_VAF	SVTYPE=BND;MATEID=r_352_0	TR:VR	204:7	33:0
chr13	63062985	r_68_0	A	[chr17:22125013[G	.	PASS	SVTYPE=BND;MATEID=r_68_1	TR:VR	100:5	88:0
chr17	22125013	r_68_1	G	[chr13:63062985[G	.	PASS	SVTYPE=BND;MATEID=r_68_0	TR:VR	100:5	88:0
chr20	21558736	r_180	T	<DUP>	.	PASS	END=21610150;SVTYPE=DUP;SVLEN=51414	TR:VR	42:8	50:0
chr4	77724117	d_1224	T	<DEL>	.	PASS	END=77724191;SVTYPE=DEL;SVLEN=-74	TR:VR	67:17	16:0
chr7	11680536	r_337_0	C	[chr8:34829181[TATAGATAGTGGAGATATTGCATATAGATAGGGATAGGGATTTT	.	PASS	SVTYPE=BND;MATEID=r_337_1;SVINSLEN=43;SVINSSEQ=TATAGATAGTGGAGATATTGCATATAGATAGGGATAGGGATTT	TR:VR	79:6	40:0
chr8	34829181	r_337_1	T	[chr7:11680536[AAATCCCTATCCCTATCTATATGCAATATCTCCACTATCTATAT	.	PASS	SVTYPE=BND;MATEID=r_337_0;SVINSLEN=43;SVINSSEQ=AAATCCCTATCCCTATCTATATGCAATATCTCCACTATCTATA	TR:VR	79:6	40:0
chr1	147005864	r_15_0	A	A]chr1_KI270714v1_random:12951]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_15_1	TR:VR	139:3	52:1
chr1_KI270714v1_random	12951	r_15_1	G	G]chr1:147005864]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_15_0	TR:VR	139:3	52:1
chr20	21572650	r_181_0	T	TCATTCT[chr3:164504921[	.	PASS	SVTYPE=BND;MATEID=r_181_1;SVINSLEN=6;SVINSSEQ=CATTCT	TR:VR	79:10	53:0
chr3	164504921	r_181_1	A	]chr20:21572650]AGAATGA	.	PASS	SVTYPE=BND;MATEID=r_181_0;SVINSLEN=6;SVINSSEQ=AGAATG	TR:VR	79:10	53:0
chr5	9733236	i_959	C	<INS>	.	PASS	END=9733236;SVTYPE=INS;SVINSLEN=169;SVINSSEQ=TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGATTTTTAGTAGATTTTATCTCATTTTATTGTTATTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATAT	TR:VR	46:8	16:0
chr7	38092998	i_1046	T	<INS>	.	PASS	END=38092998;SVTYPE=INS;SVINSLEN=151;SVINSSEQ=ATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	TR:VR	32:6	36:0
chr8	66838335	r_354	A	<DEL>	.	PASS	END=68189066;SVTYPE=DEL;SVLEN=-1350731	TR:VR	165:31	50:0
chr1	149088211	r_16	C	<DEL>	.	PASS	END=149089773;SVTYPE=DEL;SVLEN=-1562	TR:VR	96:8	28:0
chr1	45295506	r_5_0	A	]chr20:2825780]AAAAAAAAAAAAAA	.	PASS	SVTYPE=BND;MATEID=r_5_1;SVINSLEN=13;SVINSSEQ=AAAAAAAAAAAAA	TR:VR	54:6	43:1
chr20	2825780	r_5_1	A	ATTTTTTTTTTTTT[chr1:45295506[	.	PASS	SVTYPE=BND;MATEID=r_5_0;SVINSLEN=13;SVINSSEQ=TTTTTTTTTTTTT	TR:VR	54:6	43:1
chr18	1612145	r_121_0	T	[chr18:14148320[A	.	PASS	SVTYPE=BND;MATEID=r_121_1	TR:VR	77:5	44:0
chr18	14148320	r_121_1	A	[chr18:1612145[A	.	PASS	SVTYPE=BND;MATEID=r_121_0	TR:VR	77:5	44:0
chr20	58235520	r_193_0	C	[chr9:12063591[T	.	PASS	SVTYPE=BND;MATEID=r_193_1	TR:VR	105:9	39:0
chr9	12063591	r_193_1	T	[chr20:58235520[T	.	PASS	SVTYPE=BND;MATEID=r_193_0	TR:VR	105:9	39:0
chr6	52748710	r_302_0	C	CATA]chr6:52749797]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_302_1;SVINSLEN=3;SVINSSEQ=ATA	TR:VR	89:3	19:0
chr6	52749797	r_302_1	T	TTAT]chr6:52748710]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_302_0;SVINSLEN=3;SVINSSEQ=TAT	TR:VR	89:3	19:0
chr8	67772348	r_355_0	C	C]chr8:67869586]	.	PASS	SVTYPE=BND;MATEID=r_355_1	TR:VR	133:10	42:0
chr8	67869586	r_355_1	A	A]chr8:67772348]	.	PASS	SVTYPE=BND;MATEID=r_355_0	TR:VR	133:10	42:0
chrX	2228358	i_1230	A	<INS>	.	Too_small_size;Too_low_VAF	END=2228358;SVTYPE=INS;SVINSLEN=10;SVINSSEQ=GGGAGGGAGG	TR:VR	214:5	103:0
chr20	21603775	r_183_0	G	]chr3:164504881]A	.	PASS	SVTYPE=BND;MATEID=r_183_1	TR:VR	64:9	60:0
chr3	164504881	r_183_1	A	A[chr20:21603775[	.	PASS	SVTYPE=BND;MATEID=r_183_0	TR:VR	64:9	60:0
chr3	85768819	d_1162	T	<DEL>	.	PASS	END=85768864;SVTYPE=DEL;SVLEN=-45;SVINSLEN=18;SVINSSEQ=ATACACATATATACATAT	TR:VR	51:4	13:0
chr5	170779939	r_276	T	<DUP>	.	PASS	END=170915096;SVTYPE=DUP;SVLEN=135157;SVINSLEN=4;SVINSSEQ=AAAC	TR:VR	110:24	50:0
chr6	52831788	r_303	T	<DEL>	.	Too_low_VAF	END=52835254;SVTYPE=DEL;SVLEN=-3466	TR:VR	85:3	21:0
chr7	122826940	d_1383	A	<DEL>	.	PASS	END=122835984;SVTYPE=DEL;SVLEN=-9044	TR:VR	58:5	27:0
chr8	68348919	r_356_0	G	[chr8:68356627[T	.	PASS	SVTYPE=BND;MATEID=r_356_1	TR:VR	141:16	33:0
chr8	68356627	r_356_1	T	[chr8:68348919[T	.	PASS	SVTYPE=BND;MATEID=r_356_0	TR:VR	141:16	33:0
chr16	34625966	r_101_0	T	[chr16:46382554[A	.	Too_low_VAF	SVTYPE=BND;MATEID=r_101_1	TR:VR	583:4	509:1
chr16	46382554	r_101_1	A	[chr16:34625966[A	.	Too_low_VAF	SVTYPE=BND;MATEID=r_101_0	TR:VR	583:4	509:1
chr18	1884953	r_122_0	G	G]chr18:1892465]	.	PASS	SVTYPE=BND;MATEID=r_122_1	TR:VR	70:6	21:0
chr18	1892465	r_122_1	G	G]chr18:1884953]	.	PASS	SVTYPE=BND;MATEID=r_122_0	TR:VR	70:6	21:0
chr20	21673580	r_184	G	<DEL>	.	PASS	END=23187399;SVTYPE=DEL;SVLEN=-1513819	TR:VR	39:9	44:0
chr5	172296736	i_979	A	<INS>	.	PASS	END=172296736;SVTYPE=INS;SVINSLEN=394;SVINSSEQ=TACGGCTTCAGGAGTCTCGGATCCCACGGGGCATGGCAGCCTTCAGAGTCTCGAATCTCACGGGCGTACGGCTTCCAGGAGTCTCGAATCCCACGGGCGTACGGCTCAGGGAGTCTCGAATCCCACGGGCGTACGGCTTCAGGAGTCTCGAATCCCACGGGCGTACGGCTTCAGGAGTCTCGAATCCCACGGGCGTACGGCTTCAGGAGTCTCTCGCTGCTGAATCCCACGGGCGTACGGCTTCAGGAGTCTCAATCCCACGGGCGTACGGCTTCAGGAGTCTCGAATCCCACGGGCGTACGGCTTCAGGAGTCTCGAATCCCACGGGCGCACGGCTTCAGGAGTCTCGAATCCCACGGGCGTACGGCTTCAGGAGTCTCGAATCCCACGGCGT	TR:VR	28:3	32:0
chr6	104759514	r_330	A	<DUP>	.	Too_low_VAF	END=105162548;SVTYPE=DUP;SVLEN=403034	TR:VR	89:4	50:0
chr8	68508077	r_357	T	<DUP>	.	Too_low_VAF	END=68540874;SVTYPE=DUP;SVLEN=32797	TR:VR	188:4	37:0
chr9	7806775	d_1444	T	<DEL>	.	Too_small_size	END=7806816;SVTYPE=DEL;SVLEN=-41	TR:VR	44:6	21:0
chrX	2276988	d_1537	A	<DEL>	.	PASS	END=2280025;SVTYPE=DEL;SVLEN=-3037;SVINSLEN=25;SVINSSEQ=AAGAGAGAGATGGAGAGGGAACAGG	TR:VR	58:3	34:0
chr1	220563638	r_31_0	T	[chr1:220565354[C	.	Too_low_VAF	SVTYPE=BND;MATEID=r_31_1	TR:VR	98:4	21:0
chr1	220565354	r_31_1	C	[chr1:220563638[C	.	Too_low_VAF	SVTYPE=BND;MATEID=r_31_0	TR:VR	98:4	21:0
chr2	117278382	i_685	A	<INS>	.	PASS	END=117278383;SVTYPE=INS;SVINSLEN=102;SVINSSEQ=CACATATATATATACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA	TR:VR	34:6	18:0
chr20	22133357	r_185_0	T	[chr20:23756599[T	.	PASS	SVTYPE=BND;MATEID=r_185_1	TR:VR	43:10	39:0
chr20	23756599	r_185_1	T	[chr20:22133357[T	.	PASS	SVTYPE=BND;MATEID=r_185_0	TR:VR	43:10	39:0
chr6	106626930	d_1340	T	<DEL>	.	PASS	END=106627543;SVTYPE=DEL;SVLEN=-613	TR:VR	46:9	25:0
chr6	5348476	i_996	A	<INS>	.	PASS	END=5348476;SVTYPE=INS;SVINSLEN=187;SVINSSEQ=GGGGAAGTGGTGGGGGGAGAAACAGTGAAGGCTAAAGAAAGCCAGGAAATATTTTTATAAGCAGAAATAAATCAGGGAGTTTAAATTTTTCCCCGTACTCGATATAAGAATCGATAAGCAGTTGTTACCATTTTGCTGGTGCTTGTTAACCAACCGTATAAACATTTTAAGAGTCCAACGTGCTGAC	TR:VR	22:4	18:0
chr8	68509723	r_358_0	G	GCCAT]chr8:68550422]	.	PASS	SVTYPE=BND;MATEID=r_358_1;SVINSLEN=4;SVINSSEQ=CCAT	TR:VR	183:44	36:0
chr8	68550422	r_358_1	T	TATGG]chr8:68509723]	.	PASS	SVTYPE=BND;MATEID=r_358_0;SVINSLEN=4;SVINSSEQ=ATGG	TR:VR	183:44	36:0
chr1	220565176	r_32_0	A	ATACTGGTGGCTCCCAGAAGGACCTCAATATTG[chr5:140214664[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_32_1;SVINSLEN=32;SVINSSEQ=TACTGGTGGCTCCCAGAAGGACCTCAATATTG	TR:VR	122:4	37:0
chr5	140214664	r_32_1	T	]chr1:220565176]CAATATTGAGGTCCTTCTGGGAGCCACCAGTAT	.	Too_low_VAF	SVTYPE=BND;MATEID=r_32_0;SVINSLEN=32;SVINSSEQ=CAATATTGAGGTCCTTCTGGGAGCCACCAGTA	TR:VR	122:4	37:0
chr1	60418181	i_26	A	<INS>	.	PASS	END=60418182;SVTYPE=INS;SVINSLEN=79;SVINSSEQ=AATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	TR:VR	34:12	26:0
chr12	33279306	d_417	C	<DEL>	.	PASS	END=33280716;SVTYPE=DEL;SVLEN=-1410	TR:VR	28:19	16:0
chr13	85926178	r_69_0	G	]chr4:29320239]T	.	PASS	SVTYPE=BND;MATEID=r_69_1	TR:VR	37:3	55:1
chr4	29320239	r_69_1	T	T[chr13:85926178[	.	PASS	SVTYPE=BND;MATEID=r_69_0	TR:VR	37:3	55:1
chr20	22146962	r_186	G	<DEL>	.	PASS	END=23046052;SVTYPE=DEL;SVLEN=-899090	TR:VR	46:8	42:0
chr4	83411329	d_1227	C	<DEL>	.	PASS	END=83411383;SVTYPE=DEL;SVLEN=-54	TR:VR	54:9	11:0
chr8	129879710	r_367	T	<DEL>	.	PASS	END=130259413;SVTYPE=DEL;SVLEN=-379703	TR:VR	111:7	49:0
chr19	21720256	r_133_0	C	[chr2:174087492[CTCCCTCTCCCTC	.	PASS	SVTYPE=BND;MATEID=r_133_1;SVINSLEN=12;SVINSSEQ=CTCCCTCTCCCT	TR:VR	61:9	40:0
chr2	174087492	r_133_1	C	[chr19:21720256[AGGGAGAGGGAGC	.	PASS	SVTYPE=BND;MATEID=r_133_0;SVINSLEN=12;SVINSSEQ=AGGGAGAGGGAG	TR:VR	61:9	40:0
chr2	87420556	i_638	G	<INS>	.	Too_low_VAF	END=87420556;SVTYPE=INS;SVINSLEN=115;SVINSSEQ=CCAGCCAAGCCATCCATCCCGCCAAGCCAGCCGGCCAGCCAAGCCGGCCAAGCCACCTGGCCAGCTGGCCAGCCCAGCCACCTGGGCAGCCAGCCACCAGCCAAGCAACCGGCCA	TR:VR	193:3	108:1
chr20	23080669	r_187_0	C	C]chr20:23393556]	.	PASS	SVTYPE=BND;MATEID=r_187_1	TR:VR	45:6	42:0
chr20	23393556	r_187_1	G	G]chr20:23080669]	.	PASS	SVTYPE=BND;MATEID=r_187_0	TR:VR	45:6	42:0
chr22	48535077	r_210_0	C	CTCACCCTGGGA]chr22:48560130]	.	PASS	SVTYPE=BND;MATEID=r_210_1;SVINSLEN=11;SVINSSEQ=TCACCCTGGGA	TR:VR	72:8	51:0
chr22	48560130	r_210_1	A	ATCCCAGGGTGA]chr22:48535077]	.	PASS	SVTYPE=BND;MATEID=r_210_0;SVINSLEN=11;SVINSSEQ=TCCCAGGGTGA	TR:VR	72:8	51:0
chr6	54807931	r_305_0	G	[chr6:119607819[T	.	PASS	SVTYPE=BND;MATEID=r_305_1	TR:VR	90:6	50:0
chr6	119607819	r_305_1	T	[chr6:54807931[T	.	PASS	SVTYPE=BND;MATEID=r_305_0	TR:VR	90:6	50:0
chr7	129290181	r_344	T	<DEL>	.	PASS	END=129368165;SVTYPE=DEL;SVLEN=-77984	TR:VR	73:13	44:0
chr8	87153267	r_359	C	<DEL>	.	PASS	END=87264471;SVTYPE=DEL;SVLEN=-111204	TR:VR	78:5	39:0
chr1	143206027	d_86	A	<DEL>	.	Too_low_VAF	END=143206145;SVTYPE=DEL;SVLEN=-118	TR:VR	685:4	412:1
chr10	39559456	i_161	T	<INS>	.	PASS	END=39559457;SVTYPE=INS;SVINSLEN=342;SVINSSEQ=TCTCAGTCACTTCTTTGTGTTGTGTGTATTCAACTCACAGAGTTGAACCTTCCTTTAGACAGAGCAGATTCGAAACTCTCTTTTTGTGGAATTTGCAGCTGGAGTTTTCAAGCTCTTTGAGGCCAATGGTAGAAAAGGAAATATCTTCCTATAAAAACTAGACAGAATCATTCTCAGAAACTACTTTGTGATGTGTACGTTCAACTCACAGAGTTTAACCTTTCTTTTAATTGAGCAGTTTGGAAACACTCTGTTTGTAAAGTCTGCAAGTGGATATTTGGACCTCTTTGAGCCCTTCGTTGGAAACGGGATTTCTTCATATAATGCTAGACAGAAGAATTC	TR:VR	53:6	19:0
chr16	46405020	d_748	T	<INS>	.	Too_low_VAF	END=46405055;SVTYPE=INS;SVINSLEN=38;SVINSSEQ=CATCATCGAATGGAATTGAACGGAAACATCAGCGAATG	TR:VR	977:5	912:1
chr17	3906132	r_116_0	G	[chr17:3935770[T	.	PASS	SVTYPE=BND;MATEID=r_116_1	TR:VR	42:16	50:0
chr17	3935770	r_116_1	T	[chr17:3906132[T	.	PASS	SVTYPE=BND;MATEID=r_116_0	TR:VR	42:16	50:0
chr20	23204744	r_188	C	<DEL>	.	PASS	END=23388176;SVTYPE=DEL;SVLEN=-183432	TR:VR	45:6	43:0
chr22	48535116	r_211_0	C	[chr22:48560120[G	.	PASS	SVTYPE=BND;MATEID=r_211_1	TR:VR	72:11	51:0
chr22	48560120	r_211_1	G	[chr22:48535116[G	.	PASS	SVTYPE=BND;MATEID=r_211_0	TR:VR	72:11	51:0
chr4	88037053	r_253_0	G	[chr4:88039918[T	.	PASS	SVTYPE=BND;MATEID=r_253_1	TR:VR	48:6	13:0
chr4	88039918	r_253_1	T	[chr4:88037053[T	.	PASS	SVTYPE=BND;MATEID=r_253_0	TR:VR	48:6	13:0
chr6	109275010	d_1341	G	<DEL>	.	PASS	END=109275101;SVTYPE=DEL;SVLEN=-91	TR:VR	37:8	22:0
chr6	54808514	r_306	T	<DEL>	.	PASS	END=54825901;SVTYPE=DEL;SVLEN=-17387	TR:VR	95:12	35:0
chr7	132563734	r_345_0	C	C[chr8:123670193[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_345_1	TR:VR	155:5	82:0
chr8	123670193	r_345_1	T	]chr7:132563734]T	.	Too_low_VAF	SVTYPE=BND;MATEID=r_345_0	TR:VR	155:5	82:0
chr7	48636183	r_341	C	<DEL>	.	PASS	END=51268986;SVTYPE=DEL;SVLEN=-2632803	TR:VR	52:6	33:0
chr16	8961838	r_96	G	<DEL>	.	PASS	END=9100874;SVTYPE=DEL;SVLEN=-139036	TR:VR	64:8	29:0
chr18	2482273	r_123_0	A	[chr5:41269589[T	.	PASS	SVTYPE=BND;MATEID=r_123_1	TR:VR	98:7	55:0
chr5	41269589	r_123_1	T	[chr18:2482273[T	.	PASS	SVTYPE=BND;MATEID=r_123_0	TR:VR	98:7	55:0
chr19	21722730	r_134_0	A	A]chr2:174087503]	.	PASS	SVTYPE=BND;MATEID=r_134_1	TR:VR	61:8	37:0
chr2	174087503	r_134_1	T	T]chr19:21722730]	.	PASS	SVTYPE=BND;MATEID=r_134_0	TR:VR	61:8	37:0
chr3	193397664	r_226	T	<DEL>	.	PASS	END=193652817;SVTYPE=DEL;SVLEN=-255153;SVINSLEN=1;SVINSSEQ=A	TR:VR	67:5	43:0
chr4	89191725	r_254	T	<DUP>	.	PASS	END=90250292;SVTYPE=DUP;SVLEN=1058567;SVINSLEN=6;SVINSSEQ=AGCGAG	TR:VR	132:12	45:0
chr7	135150108	d_1384	T	<DEL>	.	PASS	END=135150398;SVTYPE=DEL;SVLEN=-290;SVINSLEN=6;SVINSSEQ=TATCTG	TR:VR	29:5	26:0
chr1	68586261	i_27	C	<INS>	.	Too_small_size	END=68586261;SVTYPE=INS;SVINSLEN=48;SVINSSEQ=AAAGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	TR:VR	41:9	21:0
chr13	97291121	d_436	G	<DEL>	.	PASS	END=97291620;SVTYPE=DEL;SVLEN=-499	TR:VR	29:17	25:0
chr18	2570016	r_124_0	C	C]chr5:41614734]	.	PASS	SVTYPE=BND;MATEID=r_124_1	TR:VR	99:12	34:0
chr5	41614734	r_124_1	T	T]chr18:2570016]	.	PASS	SVTYPE=BND;MATEID=r_124_0	TR:VR	99:12	34:0
chr19	34982549	r_158	C	<DUP>	.	Too_low_VAF	END=35995983;SVTYPE=DUP;SVLEN=1013434;SVINSLEN=1;SVINSSEQ=T	TR:VR	93:3	38:0
chr6	118487357	i_1019	T	<INS>	.	PASS	END=118487357;SVTYPE=INS;SVINSLEN=102;SVINSSEQ=GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGATTTTATCTCATTTTATTGTTATTTTTTTTTTTTTTTTTATTATACTCTAA	TR:VR	32:7	28:0
chr6	54812823	r_307	C	<DEL>	.	PASS	END=95241415;SVTYPE=DEL;SVLEN=-40428592	TR:VR	97:6	45:0
chr8	132607166	d_1433	A	<DEL>	.	PASS	END=132609064;SVTYPE=DEL;SVLEN=-1898	TR:VR	67:18	20:0
chr8	89879089	i_1125	T	<INS>	.	Too_small_size	END=89879089;SVTYPE=INS;SVINSLEN=41;SVINSSEQ=AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	TR:VR	46:3	19:0
