##fileformat=VCFv4.3 ##fileDate=20230117 ##source=nanomonsv-0.5.0 ##reference=/projects/jfan_prj/jfan_prj/Nanopore_Testing/2021_nanopore_sv_testing/scratch/depth_testing/POG/COLO829/hg38_no_alt.fa ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##FILTER= ##FILTER= ##FILTER= ##FILTER= ##FILTER= ##FILTER= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##ALT= ##ALT= ##ALT= ##FORMAT= ##FORMAT= #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT TUMOR CONTROL chr1 2649996 i_20 A . PASS END=2649999;SVTYPE=INS;SVINSLEN=133;SVINSSEQ=GCAGCTCCCACACCCCGAGGTGAGCATCTGACAGCCCGGAGCAGCAGGAGTACCCCCAGGTGAGCATCTGACCAACATGGAATGGCACCCATCACCCCCAGGCAGAGGCATATCTGACTGCCTGGGCAGACAG TR:VR 93:8 45:0 chr11 90060933 r_82_0 C [chr11:95656214[T . PASS SVTYPE=BND;MATEID=r_82_1 TR:VR 127:9 38:0 chr11 95656214 r_82_1 T [chr11:90060933[T . PASS SVTYPE=BND;MATEID=r_82_0 TR:VR 127:9 38:0 chr17_GL000205v2_random 29363 i_788 T . Too_low_VAF END=29363;SVTYPE=INS;SVINSLEN=99;SVINSSEQ=CCTGTTGCAGTTTTCTGGAATTCAATGTGAGGGACAAACTTTCAGACAACAGCAGGGTGTTGTGGAATCCCCGGTGAGGAACAAACATTCAGATCTTCC TR:VR 220:5 94:1 chr17_KI270730v1_random 91517 d_1013 G . Too_low_VAF END=91647;SVTYPE=DEL;SVLEN=-130;SVINSLEN=65;SVINSSEQ=AACGGAATGGTATGGATTGTTATGGAATGGAATGCAATGGAGTGGAATGGAGTGCTGTGGGGTGG TR:VR 288:3 83:1 chr5 50251502 i_1708 G . PASS END=50251502;SVTYPE=INS;SVINSLEN=174;SVINSSEQ=TTTTTCTGTGAACATACTTCTTTTTCACCATAGGCCTCAAGAGGCTCAAAATATCCCCTTGCAGATTGTACAAAAAGACTGTTTCCAAACTGCTCAATCAAAAGAAAGGTTCAACTCTGTGAAATGAATGCACATATCACAAAGAAGTTTCTCAGAAAGCTTCAGTTAAGTTTT TR:VR 80:7 24:0 chr6 41078408 r_335 A . PASS END=72424892;SVTYPE=DUP;SVLEN=31346484 TR:VR 89:14 52:0 chr16 32496745 r_171 G . PASS END=32504407;SVTYPE=DUP;SVLEN=7662 TR:VR 51:3 26:0 chr17_GL000205v2_random 29449 d_973 A . Too_low_VAF;Too_small_size END=29421;SVTYPE=INS;SVINSLEN=71;SVINSSEQ=TTCAGAACAACAGCAGGGGAGTGTTCTGGAATCCTATGTTAGAGACAAATATTCAAACCCTCGTAGCAGTG TR:VR 219:5 95:0 chr19 53919574 d_1148 G . PASS END=53919722;SVTYPE=INS;SVINSLEN=150;SVINSSEQ=GTGGAGTTGCCCCAGGCTGGTCATTGGTGGAGTTGCCCCAGGCTGGTCATTGGTGGACTTGCCCCAGGCTGGTCATTGGTGGAGTTGTCCCCAGGCCTAGTATTGGTGGAGTTGCCCCAGGTCTGGTCATTGAATGTGAGTTGCCCCAGG TR:VR 53:4 23:0 chr5 13419021 r_318_0 A [chrY:9941132[G . PASS SVTYPE=BND;MATEID=r_318_1 TR:VR 57:6 21:0 chrY 9941132 r_318_1 G [chr5:13419021[G . PASS SVTYPE=BND;MATEID=r_318_0 TR:VR 57:6 21:0 chr6 41686251 r_336 C . PASS END=50163554;SVTYPE=DEL;SVLEN=-8477303 TR:VR 96:9 42:0 chr10 39380286 i_153 G . PASS END=39380286;SVTYPE=INS;SVINSLEN=1903;SVINSSEQ=AGTTGAATGCAAACATAAAAAAGAAGTTCCTCAGAAACTTCTGTTTAGTTTTTATGTGAAGATAATTCCTTTTTCACCATGGGCCTAAAGGGCTCAGAAATATCCTTTTTCAGATTCTAGAAAAATATTGCTTCCAAACTGCACAATAAAAAGAAAGATTTACCTCTGTGAGGTGAATGCACACATCACAGAGAAGTTTCTCAGAAAGCTTCTGTCTAGTTTTTATGTGAAGATATTTCTTTGTTCACCATTGACATCAAACTGCTCAGAAATATGCCTTTGCAGATAATAGAGAAAGACTTTGCAAACTGCTCAATCAAAAGAAAGCTTCAACAATGTGAGATGAATGCACACATCACAAATAAGTTTCTCAGAAATTTTCTGTCTGGTTTTTATGTGAAGATATTTCCTTTTTCACCATAGTCCCCAAGCCACTCAGAAATATCCCTTTGCAGATTCTACAAAAAGACTGTTTCTGAACTGCTCAATCAAAAGAAAGGTTAAACTCTGTGAGATGAATGCACCCATCAAAAATAATTTTCTGAGAAAGCTTCTTTCTGGTTTTTATGTAAGATATTTCATTTTTCACCGTAGGCCTCAAAGGGCTCCCAAATATCCCTTTGCAGATTCTACAAAAAGACTGTTTCCAAACTGCTCAATCAAAAGAAATCTTCAACTATGTGAGATGAATGCCCACATCACAAAGAAATTTCTGGGAAAGATTCTGTCTAGTTTCTATATGAAGATATTTCCTTTTTCATCTTAGGCCTCAAACCTCTCAGAAATATCACTTTGCAGATTCTAGAAAATGACTGTTTCCAAACTGCTCAATCAAAACAAAGGTTCAACTCTGTAAGTTGCATCCACACATCACAAAGAAGTTTCTCAGAAAACTTCTGTCTAGTTTTTATGTGAAGATATTTCCTTTTTCACCATAGGACTCAAACAGCTCAGAAGTATCCCTTTGCAGATTCCACAGAAAGACTGTTTCCAAATTGCTCCATCAAAAGAAAGATTCAACTCTGTTGGATGAATGCACACAACACAAAGAAGTTTCTCAGAAAGCTTGTGTCTACTTTTTATGTGAACATGTTTCCTTTTTCACCAAAGGCCTCAAAATGCTCACAAATATCCCTTTGCAGATTCCTCACAAAGATGGTTTCCAAATTGCTCAATCAAAAGAAACTTTCAACTCTGTGAGATGAGTGCACACATCTCAAAGAATTTTCTGAGAAATCTTCTTACTAGTTTTTTGGTGAACATATTCCCTTTTTGACCATAGGACTCAAAGGGCCCTGATATATCCCCTTGCAGATGCTACAAAAAGACTGTTTCCAAACTGCTCAATCAAAATAAAACTCAATTCTGTGAGTTTAATGCACGTATCACAAAGAAGTTTCTCTGAAAGCTACTGTCTACTTTTTATGTGAAGATATTCCCTTTTTCAAAGTTGTCATTAAAGGGATCCTGAACATCCCTCTGCAGATTCTACAAAAAGACTGTTTCCAAACTGCTGAATCAATAGAAAGGCTCAACTCTGTGAGATGTATGCACACATCATAAATATTTTTCTCAGAAAGCTTCTGTCTAGTTTTATATGAAGATGTTTCCTTTTTCAACATAGGCCTCAAACCGCTCAGGAATATCCCTTTGCAGATTCTAGAAAAAGACCGTTTCCAAACTGCTCAATGAAAAGAAAGGTTCAATTCTGTGAGCTGAATGCACACATCACAAAGGAGTTTCTCAGAAAGCTTGTGTCTAGTTTTTATGTGAAGATATTTCCTTTCTCACCATAGGCCTCAAAATGCTCACAAATATCCCTTTACAGATTCTACACAAAGACGGTTTCCAAACTGCTCAATCAAAAGAAACTTTCAACTCTGTGAGATGAATGTACACAACA TR:VR 67:5 13:0 chr13 18021122 r_99_0 G ]chr21:10741332]A . Too_low_VAF SVTYPE=BND;MATEID=r_99_1 TR:VR 328:8 100:0 chr21 10741332 r_99_1 A A[chr13:18021122[ . Too_low_VAF SVTYPE=BND;MATEID=r_99_0 TR:VR 328:8 100:0 chr20 29283857 i_1244 C . PASS END=29283859;SVTYPE=INS;SVINSLEN=175;SVINSSEQ=CAAAGTTCTCAAAGGGCTCAAAACTATCTCTTTGCAGATTCCACAAAAAGACCATTTCCAAACTGCTCTATGAATAGTAAGGTTCAATTCTATCCAATGAATGAAAAAATCACAAAGAAGTTTCTCAAAAATTTTCTGTCTAGTTTTCATATGAGGATATTTCCTATTTCACCAT TR:VR 70:4 23:0 chr3 169550072 i_1522 A . Too_small_size END=169550072;SVTYPE=INS;SVINSLEN=36;SVINSSEQ=GGAAAGGCTAGCTTGAGTTAGACTTTGAATGATGCG TR:VR 38:19 28:0 chr7 94157776 r_356_0 A [chr7:110435861[C . PASS SVTYPE=BND;MATEID=r_356_1 TR:VR 120:6 24:0 chr7 110435861 r_356_1 C [chr7:94157776[C . PASS SVTYPE=BND;MATEID=r_356_0 TR:VR 120:6 24:0 chrUn_KI270442v1 38144 d_2161 G . Too_low_VAF END=38205;SVTYPE=DEL;SVLEN=-61 TR:VR 109:3 44:1 chr10 39381312 i_154 T . PASS END=39381312;SVTYPE=INS;SVINSLEN=515;SVINSSEQ=GAGATGAATGTACACAACACAAATAATTTTCTGAGAAATCTTCTTCCTAGTTTTTTGGTGAATATATTCCCTTTTTCACCATAGGCCTCAAGGGGCCCCTAAATATCCCTTTGAAGATTCTACACAAAGACTGTTTCCAAACTGCCCAATCAAAAGAAAATCTCAAGTCTGTGGGTAGAATGCACGTATCACAAAGAAGTTTCTCTGAAAGCTACTGTCTACTTTTTATGTGAAGATATTCCCTTTTTCAAAGTTGTCATTAAAGGGATCCTGAACATCCCTCTGCAGATTCTACAAAAAGACTGTTTCCAAACTGCTGAATCAATAGAAAGGCTCAACTCTGTGAGATGTATGCACACATCATAAATATTTTTCTCAGAAAGCTTCTGTCTAGTTTTATATGAAGATGTTTCCTTTTTCAACATAGGCCTCAAACCGCTCAGGAATATCCCTTTGCAGATTCTAGAAAAAGACCGTTTCCAAACTGCTCAATGAAAAGAAAGGTTCAATTCTGT TR:VR 67:8 14:0 chr10 478409 r_17_0 G GAGAGGGGGGAGGGGAGAACAGGGGAGGAGAGGAGAGGGGAGGGGAGGAGAGGGAGAGGAGGGGAGAACAGGGAGGAGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGAGAGCACTCTATTCG[chr11:99820199[ . PASS SVTYPE=BND;MATEID=r_17_1;SVINSLEN=155;SVINSSEQ=AGAGGGGGGAGGGGAGAACAGGGGAGGAGAGGAGAGGGGAGGGGAGGAGAGGGAGAGGAGGGGAGAACAGGGAGGAGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGAGAGCACTCTATTCG TR:VR 118:7 48:1 chr11 99820199 r_17_1 A ]chr10:478409]CGAATAGAGTGCTCTCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCTCCTCCCTGTTCTCCCCTCCTCTCCCTCTCCTCCCCTCCCCTCTCCTCTCCTCCCCTGTTCTCCCCTCCCCCCTCTA . PASS SVTYPE=BND;MATEID=r_17_0;SVINSLEN=155;SVINSSEQ=CGAATAGAGTGCTCTCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCTCCTCCCTGTTCTCCCCTCCTCTCCCTCTCCTCCCCTCCCCTCTCCTCTCCTCCCCTGTTCTCCCCTCCCCCCTCT TR:VR 118:7 48:1 chr18 79039031 i_926 T . Too_low_VAF END=79039033;SVTYPE=INS;SVINSLEN=54;SVINSSEQ=GATGGTGGATGGTACTTTCTCGTGGATAGTACTATACTGCTAAGGTTCTCGTGG TR:VR 201:7 26:0 chr20 29284002 i_1245 T . PASS END=29284002;SVTYPE=INS;SVINSLEN=408;SVINSSEQ=TTTATGTGAAGATATTTCCTATTTCACCAAAGTTCTCAAAGGGCTCAAAACTATCTCTTTGCAGATTCCACAAAAAGACCATTTCCAAACTGCTCTATGAATAGTAAGGTTCAATTCTATCCAATGAATGAAAAAATCACAAAGAAGTTTCTCAAAAATTTTCTGTCTAGTTTTCATATGAGGATATTTCCTATTTCACCATAGTCCTCAAAGGGCTCAAAAGTATCCCTTTGCACATTCTACAAAAAGACTGCTTCCAAACTGCTCAATCAAAGAAAGGTTCAACCTTGTGCATTTGATGAACACATCACAAAGATGTTTATCAGAATCCTTCTGTCTAGTTTTTATGGGAAGATATCTCCTTTTTCACCATAGTTCTCAAACCTCTCACAAATATCCCTCTGCAGA TR:VR 69:7 23:0 chrY 56843298 d_2380 G . Too_low_VAF END=56843609;SVTYPE=DEL;SVLEN=-311;SVINSLEN=42;SVINSSEQ=GCATTGTGACATATCTCTGCACTGATCACCCAGGTGATGCAA TR:VR 392:9 153:1 chr1 235731795 r_14 T . Too_low_VAF END=236281614;SVTYPE=DUP;SVLEN=549819;SVINSLEN=33;SVINSSEQ=TATATAATACATTTAAGAGCCTAGGATCTAGGG TR:VR 91:3 34:0 chr20 29283898 i_1246 G . Too_low_VAF END=29283898;SVTYPE=INS;SVINSLEN=157;SVINSSEQ=TTTCCAAAGTGCTCAATCAAAAGAAAGATTCACCTCTGTTAAACGAATGCACACATCAGAAAGAAGTTTCTCAAAATGTTTCTGTCTAGTTTTAATGTGAAGATAATTCCTTTTTGACTTTAGTCAAACTGCTCACAAATATCCCTCTACATATTCT TR:VR 70:3 23:0 chr4 136293486 r_313_0 T ]chr7:117169153]T . Too_low_VAF SVTYPE=BND;MATEID=r_313_1 TR:VR 119:4 49:1 chr7 117169153 r_313_1 T T[chr4:136293486[ . Too_low_VAF SVTYPE=BND;MATEID=r_313_0 TR:VR 119:4 49:1 chr4 68497798 r_309_0 G G]chr4:69028653] . PASS SVTYPE=BND;MATEID=r_309_1 TR:VR 62:8 51:0 chr4 69028653 r_309_1 T T]chr4:68497798] . PASS SVTYPE=BND;MATEID=r_309_0 TR:VR 62:8 51:0 chr7 99248577 r_357 G . PASS END=104588596;SVTYPE=DUP;SVLEN=5340019 TR:VR 132:8 38:0 chr8 62208735 i_1943 A . PASS END=62208736;SVTYPE=INS;SVINSLEN=321;SVINSSEQ=TTCGGCCCGGTGTGGTGGCTCACGCCTGTAATCCCAATACTTTGGGAGGCCAAGATGGGCCGATCACGAGGTCAGGAGATCGAGACCATCTTGGCTAACACAGTGAGACCCCATCTCTACTAAAAATACAAAAAATTAGCCATGTGTGGCGGCACACGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCAGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCAAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAGAGTGCAATGGAAA TR:VR 35:3 13:0 chr18 78513745 i_882 A . PASS END=78513745;SVTYPE=INS;SVINSLEN=1021;SVINSSEQ=ATCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAATCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTACCGCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTACCCCAAGAATCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAATCAGCCTATTTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTACCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTACCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAATCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTACCCCAAGAATCAGCCTATCTAGATCTACTAACAGTGGGTCAGCAGACACTACCCCAAGAATCAGCCTATCTAGATCTACTAACAGTGGGTCAGCAGACACTACCCCAAGTATCAGCCTATCTAGATCTACTAACAGTGGGTCAGCAGACACTACCCCAAGTATCAGCCTATCTAGTTCTACTAACAGTGGGTCAGCAGACACTACCCCAAGCATCAGCCTATCTAGTTCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGCATCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGCA TR:VR 112:9 22:0 chr19 21681380 r_227_0 T ]chr6:29920121]AAAATGGCCATACTGCCCAAGGTAATTTACAGATA . Too_low_VAF SVTYPE=BND;MATEID=r_227_1;SVINSLEN=34;SVINSSEQ=AAAATGGCCATACTGCCCAAGGTAATTTACAGAT TR:VR 119:4 53:0 chr6 29920121 r_227_1 A AATCTGTAAATTACCTTGGGCAGTATGGCCATTTT[chr19:21681380[ . Too_low_VAF SVTYPE=BND;MATEID=r_227_0;SVINSLEN=34;SVINSSEQ=ATCTGTAAATTACCTTGGGCAGTATGGCCATTTT TR:VR 119:4 53:0 chr20 29284807 i_1247 T . PASS END=29284807;SVTYPE=INS;SVINSLEN=342;SVINSSEQ=TCAAATCCGTGTGATGAATGCACACATTATGAAGAAGTTTTTCAGAATGCTTCTGTCTAGTTTTTATGTGAAGATATTTCTTTATCTCCATAGACCTCAAAACGCTCAGATATATCCCACTGCAGATACTATGAAAAGACTGTTTCCAATCTGCTCAATCAAAAGAAAGCTTCTATGCTGTGAGAAGAAAGAACCCATTATAAGGAAGCTTCTCAGAATGCTTCTGTCTAATTTTCTGTGAAGATATTTCCTTTTTCACCATAGGCCGCAAACCTCTCACAAATATCCCTCTGCAGATAGTACAAAAAGACTCTTTCTGAACTGTGCATTCACAAGAAAGGT TR:VR 71:4 23:0 chr4 68708974 r_310 C . PASS END=69013628;SVTYPE=DEL;SVLEN=-304654 TR:VR 52:4 38:0 chr6 44183299 d_1898 C . Too_small_size END=44183335;SVTYPE=DEL;SVLEN=-36 TR:VR 30:7 17:0 chr7 99256801 r_358_0 A [chr7:103383400[G . PASS SVTYPE=BND;MATEID=r_358_1 TR:VR 129:8 43:0 chr7 103383400 r_358_1 G [chr7:99256801[G . PASS SVTYPE=BND;MATEID=r_358_0 TR:VR 129:8 43:0 chr8 62210387 i_1944 T . PASS END=62210388;SVTYPE=INS;SVINSLEN=305;SVINSSEQ=AGGCTGGGTGCTGTGGCTCATGCCTGTAATCCCAACACTCTGGGAGGTCGAGGCAGGTGGATCACAAGGTCAAGACAATCCTGGCCAACATGGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCTGGGTGTGGTGGCGCATGCCTGTAGTCCCAGCTACTCGGGGGACTGAGACAGGAGAATCACTTGAACCCGGGAGGCAGAGGTTGCAGTGAGCCGAGATTGTGCCACTGCACTCCAGCCTGGCAACAGTGGGAGACTCAGTCTAAAAAAGAAAAAAAAAGTAAAAAAGAATCTAACTAA TR:VR 37:3 16:0 chr11 56697214 r_41_0 A [chr11:57791559[ATTTGTAAAAC . PASS SVTYPE=BND;MATEID=r_41_1;SVINSLEN=10;SVINSSEQ=ATTTGTAAAA TR:VR 110:17 37:0 chr11 57791559 r_41_1 C [chr11:56697214[TTTTACAAATC . PASS SVTYPE=BND;MATEID=r_41_0;SVINSLEN=10;SVINSSEQ=TTTTACAAAT TR:VR 110:17 37:0 chr11 995695 r_26_0 T [chr16:14353811[G . PASS SVTYPE=BND;MATEID=r_26_1 TR:VR 70:6 50:0 chr16 14353811 r_26_1 G [chr11:995695[G . PASS SVTYPE=BND;MATEID=r_26_0 TR:VR 70:6 50:0 chr18 79039643 d_1089 T . Too_low_VAF;Too_small_size END=79039633;SVTYPE=INS;SVINSLEN=18;SVINSSEQ=CTTGCGGTTGGTACTCTA TR:VR 199:3 26:0 chr6 46913072 r_337_0 A [chr6:79089556[GGGATTTATTATTG . PASS SVTYPE=BND;MATEID=r_337_1;SVINSLEN=13;SVINSSEQ=GGGATTTATTATT TR:VR 90:26 48:0 chr6 79089556 r_337_1 G [chr6:46913072[AATAATAAATCCCG . PASS SVTYPE=BND;MATEID=r_337_0;SVINSLEN=13;SVINSSEQ=AATAATAAATCCC TR:VR 90:26 48:0 chr7 128147226 r_369 G . PASS END=138159883;SVTYPE=DUP;SVLEN=10012657;SVINSLEN=18;SVINSSEQ=ACTTAAAGTAATTAATAT TR:VR 138:23 36:0 chr11 57430632 r_42 T . PASS END=62065911;SVTYPE=DUP;SVLEN=4635279 TR:VR 119:11 55:0 chr18 79139412 r_222 A . PASS END=79555775;SVTYPE=DUP;SVLEN=416363 TR:VR 487:132 51:0 chr19 21722728 r_228_0 A A]chr2:174087503] . Too_low_VAF SVTYPE=BND;MATEID=r_228_1 TR:VR 87:3 45:0 chr2 174087503 r_228_1 T T]chr19:21722728] . Too_low_VAF SVTYPE=BND;MATEID=r_228_0 TR:VR 87:3 45:0 chr6 47871488 r_338 T . PASS END=68971943;SVTYPE=DEL;SVLEN=-21100455 TR:VR 96:28 33:0 chr7 128798211 i_1849 C . Too_low_VAF END=128798255;SVTYPE=INS;SVINSLEN=483;SVINSSEQ=TGCTCCTCAGTAGGGTGCTTTCTAGGCTGAGATCCCCCACGGCCCTGCGGGGAGAGGACCGAGGCTGCCCTCGCGCACGCGCGTCACCCGTTTCCGCCTGGACGGGGCGCGCGCGGCCCGAGAGGCAGCTGCTGTTCAGAGGCTGCGTTCCGGCCGCCACAGCCCCTCCGGGGCGGGACCGGCCAGCGGCTGGGTGGCCCCCCAGGGACACAGCCTCTACAGGGGGGCGGCGAGATGGAGGCCATAACCAGTGAGTGAGAATCCACTTCTCTGCCCGCAGCCCGACTCCTCAGCCCTCGGCCTCGCCCGGACGGTCCCAGCCCCATACTCAACGGGCGCCAGCGCCTCGGAACCCGGGGGACCCTGGCTGGCCTCTTCAACTCCCGGGCGCTCCTGGATTAGTCTGCCCAGGCCTCGGGTCCTGTCCCGGGTGACTCCTAGGTGACCCTGCACCTTCTGTTCCCAGTAGATCTGAGAATGCCT TR:VR 83:3 21:0 chrY 56844760 i_2203 C . Too_low_VAF END=56844760;SVTYPE=INS;SVINSLEN=72;SVINSSEQ=CAGGTGATGTAACACTTGTCTGGGCTCTGCCTACAGGAGGCATTTTGAGACATATCTCTGCACTGATCACTG TR:VR 339:9 142:1 chr11 57631212 r_43 A . PASS END=62066246;SVTYPE=DEL;SVLEN=-4435034 TR:VR 133:14 52:0 chr16 70067770 r_176_0 A A[chr17:44524503[ . PASS SVTYPE=BND;MATEID=r_176_1 TR:VR 67:14 34:0 chr17 44524503 r_176_1 G ]chr16:70067770]G . PASS SVTYPE=BND;MATEID=r_176_0 TR:VR 67:14 34:0 chr18 79152082 r_223_0 A A]chr18:79556127] . PASS SVTYPE=BND;MATEID=r_223_1 TR:VR 425:108 45:0 chr18 79556127 r_223_1 A A]chr18:79152082] . PASS SVTYPE=BND;MATEID=r_223_0 TR:VR 425:108 45:0 chr21 14960596 d_1495 A . PASS END=14960822;SVTYPE=DEL;SVLEN=-226 TR:VR 58:8 16:0 chr6 49016485 r_339 G . PASS END=50372438;SVTYPE=DUP;SVLEN=1355953;SVINSLEN=32;SVINSSEQ=AGCATAGTAGTATATATATATATATATATATA TR:VR 68:14 31:0 chr11 57631668 r_44 G . PASS END=57634984;SVTYPE=DUP;SVLEN=3316 TR:VR 84:7 25:0 chr16 70067782 r_177_0 C ]chr17:44524494]G . PASS SVTYPE=BND;MATEID=r_177_1 TR:VR 67:19 34:0 chr17 44524494 r_177_1 G G[chr16:70067782[ . PASS SVTYPE=BND;MATEID=r_177_0 TR:VR 67:19 34:0 chr21 7955255 d_1461 A . Too_low_VAF END=7955321;SVTYPE=DEL;SVLEN=-66;SVINSLEN=1;SVINSSEQ=C TR:VR 658:3 254:0 chr8 64232478 i_1946 G . PASS END=64232478;SVTYPE=INS;SVINSLEN=222;SVINSSEQ=TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATACTGTGTGTGTGTGTGTGTGTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTCTGTATATATATACTATATATATACTGTATATCTCTTATATATACTATATATACATATATATACTGTATAGTATATAT TR:VR 36:4 6:0 chr11 25231312 r_35 G . PASS END=26821277;SVTYPE=DEL;SVLEN=-1589965 TR:VR 120:15 44:0 chr11 57633737 r_45 T . PASS END=59882133;SVTYPE=DEL;SVLEN=-2248396 TR:VR 147:10 47:0 chr13 18758878 r_100_0 C C]chr13:31484182] . PASS SVTYPE=BND;MATEID=r_100_1 TR:VR 103:7 40:0 chr13 31484182 r_100_1 A A]chr13:18758878] . PASS SVTYPE=BND;MATEID=r_100_0 TR:VR 103:7 40:0 chr18 78514604 i_887 A . Too_low_VAF END=78514604;SVTYPE=INS;SVINSLEN=1291;SVINSSEQ=CCCCAAGCATCAGCCTATCTAGTGCTACTAACAGTGGGTCAGCAGACACTACCCCAAGCATCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAATCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCTGAGAGTCAGCCCTATCTAGACCCACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATCTAGACCTACAAGTATCAGCCTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATTTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATTTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTACCGCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTACCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAATCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTACCCCAAGAATCAGCCTATCTAGATCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAAATCAGCCTATCTAGATCTACTAACAGTGGGTCAGCAGACACTACCCCAAGTATCAGCCTATCTAGATCTACTAACAGTGGGTCAGCAGACACTACCCCAAGTATCAGCCTATCTAGTTCTACTAACAGTGGGTCAGCAGACACTACCCCAAGAGTCAGCCTATCTAGTTCTACTAACAGTGGGTCAGCAGACACTACCCCAAGAATCAGCCTATCTAGACCTACTTCAACAGTGGGTCAGCAGACACTGCCCCAAGAATCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGC TR:VR 116:3 22:0 chr22 20162184 r_292 C . PASS END=20487521;SVTYPE=DUP;SVLEN=325337;SVINSLEN=48;SVINSSEQ=ACGATCACTACCACCACCACCACCATCACCATCACTACCACCACCACC TR:VR 305:23 97:0 chr5 60567792 d_1844 T . PASS END=60567875;SVTYPE=DEL;SVLEN=-83 TR:VR 67:17 27:0 chr7 132662567 r_370_0 A A]chr7:134634649] . PASS SVTYPE=BND;MATEID=r_370_1 TR:VR 177:25 40:0 chr7 134634649 r_370_1 A A]chr7:132662567] . PASS SVTYPE=BND;MATEID=r_370_0 TR:VR 177:25 40:0 chr1 70021310 r_10_0 C CTCATGACATGGGA]chr1:70052284] . PASS SVTYPE=BND;MATEID=r_10_1;SVINSLEN=13;SVINSSEQ=TCATGACATGGGA TR:VR 127:8 37:0 chr1 70052284 r_10_1 A ATCCCATGTCATGA]chr1:70021310] . PASS SVTYPE=BND;MATEID=r_10_0;SVINSLEN=13;SVINSSEQ=TCCCATGTCATGA TR:VR 127:8 37:0 chr11 57634806 r_46 C . PASS END=61076447;SVTYPE=DUP;SVLEN=3441641 TR:VR 129:7 46:0 chr13 18778178 r_101_0 C C]chr13:31484182] . Too_low_VAF SVTYPE=BND;MATEID=r_101_1 TR:VR 108:5 38:0 chr13 31484182 r_101_1 A A]chr13:18778178] . Too_low_VAF SVTYPE=BND;MATEID=r_101_0 TR:VR 108:5 38:0 chr19 24349157 i_980 A . PASS END=24349158;SVTYPE=INS;SVINSLEN=515;SVINSSEQ=TTGGTCTCACAAAGATAAGGCTTTCTATTTATTTGGCAGTTTGGAAACACTGTTTTTGTAGAATCTGTGAAAGGATACATGGGAACGCAATCTGGCCTATGTTGAAAAAGGAAATACTCTCAGACAAAATCTTGAAAGAAGTTTTCTGATTAACTGCTTTGTGAAGTGTCCATTCATCTTTCAGAGTTAAACTTTATTTCCATTGAGCATCTTGGAAACACAATTTTGTAGAATCTGCAAAGGGATAATTTGTAGCACATTGTGGCCTATGGTGAATAAGGAAATACCTTCACATAAAAACTAGAAAGAGGCTTTCTGGAAATTGCTTTGTGATGTCTGCATTTGTCTCAGAGAGTTTAAGCATTCTTTTGATTAAGAAGTTTGGAAAACAGTTTTTGGTAGAATCTGGGAAAGGATATTTGGGAGCACATTGGGGCCTATGGTGAGAAAGGAAATATCCTCAGAAGAAAACCAGAAAGATGCTCTCTGAGGAACTGTTTTGTGATGTGTACATT TR:VR 94:8 34:1 chr4 165216603 r_314_0 T [chr4:165217673[G . PASS SVTYPE=BND;MATEID=r_314_1 TR:VR 51:3 24:0 chr4 165217673 r_314_1 G [chr4:165216603[G . PASS SVTYPE=BND;MATEID=r_314_0 TR:VR 51:3 24:0 chr1 2668986 d_15 G . Too_low_VAF END=2669074;SVTYPE=DEL;SVLEN=-88;SVINSLEN=8;SVINSSEQ=CGAGCAGC TR:VR 293:6 127:0 chr10 133679515 r_24_0 G [chr18:107072[TCTTTGTTGATCAGTTCAGAGATGTG . Too_low_VAF SVTYPE=BND;MATEID=r_24_1;SVINSLEN=25;SVINSSEQ=TCTTTGTTGATCAGTTCAGAGATGT TR:VR 515:3 191:0 chr18 107072 r_24_1 G [chr10:133679515[ACATCTCTGAACTGATCAACAAAGAG . Too_low_VAF SVTYPE=BND;MATEID=r_24_0;SVINSLEN=25;SVINSSEQ=ACATCTCTGAACTGATCAACAAAGA TR:VR 515:3 191:0 chr13 20706415 r_102_0 G [chr13:48921152[A . PASS SVTYPE=BND;MATEID=r_102_1 TR:VR 87:21 46:0 chr13 48921152 r_102_1 A [chr13:20706415[A . PASS SVTYPE=BND;MATEID=r_102_0 TR:VR 87:21 46:0 chr19 24350754 d_1130 T . PASS END=24351044;SVTYPE=DEL;SVLEN=-290;SVINSLEN=122;SVINSSEQ=GTCCATTTTGTGAATGGATGTTTTGGAGCTCATTGAGGTCAATGGCAAAAAAGCAAGTATGCCAGGATAAAAACTACAAGGAAGCAATCTGAGAAACTGCTTTGTGATGTGTGCATTCATCT TR:VR 96:8 37:1 chr21 7232162 d_1436 A . PASS END=7232388;SVTYPE=DEL;SVLEN=-226 TR:VR 124:15 42:0 chr5 39926002 r_322_0 A [chr9:12556915[T . Too_low_VAF SVTYPE=BND;MATEID=r_322_1 TR:VR 98:3 44:1 chr9 12556915 r_322_1 T [chr5:39926002[T . Too_low_VAF SVTYPE=BND;MATEID=r_322_0 TR:VR 98:3 44:1 chr1 239732180 i_91 T . PASS END=239732180;SVTYPE=INS;SVINSLEN=161;SVINSSEQ=ATACTAATATCTCATTTAAAGATAGAAAGTATGCCTAACATCTCACTTAGATAAGTATACCTAATATCTCACTTAGATGAGTATACCTAGGTATCTCATTTAGATAAGTATACCTAATATCTCACTTAGATAAGTATACCTAATATCTCACTTAGATAAGA TR:VR 54:3 19:0 chr1 74019285 r_11_0 G G]chr15:20262342] . Too_low_VAF SVTYPE=BND;MATEID=r_11_1 TR:VR 189:5 107:0 chr15 20262342 r_11_1 C C]chr1:74019285] . Too_low_VAF SVTYPE=BND;MATEID=r_11_0 TR:VR 189:5 107:0 chr10 39536908 d_207 C . PASS END=39537021;SVTYPE=INS;SVINSLEN=113;SVINSSEQ=ACAGAAACTCCTTTGTGTTGTGTGCATCCAACTCACAGAGTTGAATCTTTCTTTTGATAGAGCAGTTTTGAAACACTCGTTTTGTATGGTCTGCAAGTGGAATTTTGGAGTGT TR:VR 68:10 16:0 chr11 30127393 r_36 T . PASS END=30132284;SVTYPE=DUP;SVLEN=4891 TR:VR 56:3 27:0 chr11 57812322 i_293 T . PASS END=57812322;SVTYPE=INS;SVINSLEN=166;SVINSSEQ=GTGACTATACAAGAACATATAAAATAAGGTCGCAGCCACTAACCATGTTTCATGGCAAGGAGAGGTGATAAGAAAGATGAAATTAGGCGCAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCGGGTGGATCACCTGAGGTCAGGAGTTCAAGACC TR:VR 70:11 10:0 chr12 111430708 d_340 G . PASS END=111431030;SVTYPE=DEL;SVLEN=-322 TR:VR 42:7 23:0 chr16 33339514 d_857 G . Too_low_VAF;Too_small_size END=33339479;SVTYPE=INS;SVINSLEN=83;SVINSSEQ=CTTGGCTGGCTGGGTGGCTTGGCTGGCTTGGCTGGCTTGGCTGGCTGGCTGGCTTGGCTGGCTTGGCTGGCTGGATGGCTTGG TR:VR 116:5 68:1 chr17_GL000205v2_random 34022 d_982 A . Too_low_VAF;Too_small_size END=34002;SVTYPE=INS;SVINSLEN=28;SVINSSEQ=ATCCTATGTGAGGGTCAAACATTCAGAC TR:VR 233:3 104:0 chr2 94510325 d_1309 T . PASS END=94510439;SVTYPE=INS;SVINSLEN=115;SVINSSEQ=CACAAGGAAGTTTCTGAGAATTCTTCTGTCTAGTTTTTATTGGAAGATATTTCCTTTTTCAGCATATGCCTCAAAGAGCTCCAAGTTTCCACTTACAAATTCTTCAAAAAGAGTG TR:VR 54:11 9:0 chr4 76916070 r_311_0 C ]chr6:100746174]CCTCTCCCTCTCCCTCTCCCTCTCCTCCCCCTCCCCCTCCCCTCCCCC . PASS SVTYPE=BND;MATEID=r_311_1;SVINSLEN=47;SVINSSEQ=CCTCTCCCTCTCCCTCTCCCTCTCCTCCCCCTCCCCCTCCCCTCCCC TR:VR 79:7 56:1 chr6 100746174 r_311_1 C CGGGGAGGGGAGGGGGAGGGGGAGGAGAGGGAGAGGGAGAGGGAGAGG[chr4:76916070[ . PASS SVTYPE=BND;MATEID=r_311_0;SVINSLEN=47;SVINSSEQ=GGGGAGGGGAGGGGGAGGGGGAGGAGAGGGAGAGGGAGAGGGAGAGG TR:VR 79:7 56:1 chr11 57814693 r_47_0 A [chr11:61074126[CG . PASS SVTYPE=BND;MATEID=r_47_1;SVINSLEN=1;SVINSSEQ=C TR:VR 125:12 35:0 chr11 61074126 r_47_1 G [chr11:57814693[GG . PASS SVTYPE=BND;MATEID=r_47_0;SVINSLEN=1;SVINSSEQ=G TR:VR 125:12 35:0 chr14 16129996 d_389 A . PASS END=16130448;SVTYPE=DEL;SVLEN=-452;SVINSLEN=110;SVINSSEQ=AGACTGTTTCCAAACTACTCAATCAAAAGAAATGTTCAACTCTTTTATTTGAATGCACGCATCACAAAGAAGTTTCTCAGCATGCTTCTGTCTAGTTTTTATGTGAAGAT TR:VR 90:5 33:0 chr16 34062985 i_651 A . Too_low_VAF END=34062985;SVTYPE=INS;SVINSLEN=392;SVINSSEQ=TGGAATGGAATGGACATAGTGGAGTGAGTGGAGTGGATGGAGGAATGATGAATGGAATGGAATGTAGAAATGAAATGTGAGCTGAGATTGTGCCATTGGATTCCAGCCTGGGTGGAAAGAGTGAGATCCTGTAGAAAGAAAGGAATGGAATGGAATGGAATGGAATGGAGTGGAATGGAGTGGATTGGAGTGGAGTGGAGTGGGATTGAAGTGGAAGGGAAGTGGAGTGTGAGTGGAGTGGAATGGAGTGGAGTGGAGAATGGAATGGAGTGGAATGGAATGGAATGGAACGGCACACAAGAAATGGAGATCAGATTGAGATCCAGTGGAAATCGAACGGATGGAATGGAACAAAAGTGAATAGTAGAAACGGTGGAATGGAATGGAATGGA TR:VR 238:4 99:1 chr19 54727091 d_1158 G . Too_low_VAF END=54729350;SVTYPE=DEL;SVLEN=-2259 TR:VR 88:4 31:0 chr21 7241735 i_1300 T . Too_low_VAF END=7241736;SVTYPE=INS;SVINSLEN=197;SVINSSEQ=TTGTGATGTGTGAATTCATCTCCCAGAGTTGAAACATTCTTTTGATGGAACAGTATTGATATACTCTTTTGGTAGAATCTGCAAGTGGACATTTCAAATTCATTGAGGCTTATGGTGGAAAAGGAAATATCTTTACATAAAAACAAGGAAATATCTTTACATAAAAACTAGACAGAAGAATCCTGGGAAACTTCTTT TR:VR 158:6 41:1 chr7 142042822 d_1977 A . PASS END=142042864;SVTYPE=DEL;SVLEN=-42;SVINSLEN=41;SVINSSEQ=TATAATATATATAAAATATAAACACTAATATCTAAATATAA TR:VR 54:4 22:0 chr10 39543627 d_209 T . PASS END=39543737;SVTYPE=INS;SVINSLEN=111;SVINSSEQ=AGAATCTGCAAGTGGACATTTGGAGCGCTTTGAGATCTTTAGTGAAAAAGGAAATATCTTCACATAAAAACTGGATGGAAGCATTTACAGAAACTTCTTTGTGACGAGTGC TR:VR 68:5 17:0 chr11 57815018 r_48_0 A A]chr11:58691187] . PASS SVTYPE=BND;MATEID=r_48_1 TR:VR 142:12 40:0 chr11 58691187 r_48_1 A A]chr11:57815018] . PASS SVTYPE=BND;MATEID=r_48_0 TR:VR 142:12 40:0 chr13 21735349 r_103 C . PASS END=30617508;SVTYPE=DUP;SVLEN=8882159 TR:VR 134:11 28:0 chr16 85408518 d_893 G . PASS END=85408611;SVTYPE=DEL;SVLEN=-93;SVINSLEN=26;SVINSSEQ=GCCCCCGGATAATCTCACTGTTACAC TR:VR 25:4 24:0 chr18 79356681 i_932 T . Too_low_VAF END=79356782;SVTYPE=INS;SVINSLEN=187;SVINSSEQ=TCCATTGTGCAGTGTAAAGTGTGAGGGTGCCCTGGGTCTGGAGGTGTCCCAGGTGAGGGACCCTGTGTGAGGGTGCTCTGGGTCTGGAGGTGTCTGTGTGGAGGGACCCTGTGTGAGGGGTGCTCTGGGTCTGGAGGTGTCTGAGGACCCTGTGTGAGGGTGCCCTGGGTCTGGAGGTGTCTGTGTG TR:VR 257:7 15:0 chr2 132034224 i_1170 T . PASS END=132034224;SVTYPE=INS;SVINSLEN=156;SVINSSEQ=TCAACATTTCATTACATTTCATCATTTCACTACATCTCATCATTTCATCTCTCATTGCATTACTTCATTTCATCTCATCATTTCATTTCATCATTTCATCATTTCATCTCATTTCATTTCATCTCATCATTTCATCATTTCATTTTATTCTTTTCA TR:VR 60:4 22:0 chr11 32212875 r_37 A . PASS END=49156204;SVTYPE=DEL;SVLEN=-16943329;SVINSLEN=7;SVINSSEQ=GTAAAAG TR:VR 99:19 46:0 chr11 58690385 r_49_0 G ]chr21:10408438]G . Too_low_VAF SVTYPE=BND;MATEID=r_49_1 TR:VR 254:9 100:0 chr21 10408438 r_49_1 G G[chr11:58690385[ . Too_low_VAF SVTYPE=BND;MATEID=r_49_0 TR:VR 254:9 100:0 chr13 21768256 r_104_0 A A[chr6:41665822[ . PASS SVTYPE=BND;MATEID=r_104_1 TR:VR 115:7 38:0 chr6 41665822 r_104_1 T ]chr13:21768256]T . PASS SVTYPE=BND;MATEID=r_104_0 TR:VR 115:7 38:0 chr15 26759095 d_810 C . PASS END=26759162;SVTYPE=DEL;SVLEN=-67;SVINSLEN=1;SVINSSEQ=T TR:VR 37:33 24:0 chr18 67869207 d_1047 A . PASS END=67869272;SVTYPE=DEL;SVLEN=-65 TR:VR 61:24 23:0 chr5 650096 i_1641 T . PASS END=650096;SVTYPE=INS;SVINSLEN=1211;SVINSSEQ=GTGACTGTGAGGCGTGGACTGTGAGGTGTGACTGTGAGGCGTGGACTGTGAGGTGTGACTGAGGTGTGACTGAGGTGTGACTGTGAGGCGTGGACTGTGAGGTGACTCAGGAGGCGTGGACTGTGAGGCGTGGACTGTGAGGTGTGACTGTGAGGCGTGGACTGTGAGGTGTGACTGTGAGGTGTGACTGTGAGGTGTAGACTGTGAGGCGTGGACTGTGAGGTGTGACTGTGAGGCGTGGACTGTGAGGTGTGACTGTGAGGCGTGGACTGTGAGGTGTGACTGTGAGGTGTGACTGTGGGTGTGTGAGGTGTGACTGTGAGGCGTGGACTGAGGTGTGACTGTGAGGCGTGGACTGTGAGGTGTGACTGTGAGGTGTGTGACTGTGAGGCGTGGACTGTGAGGTGTGACTGTGAGGCGTGGACTGTGAGGTGTGACTGTGAGGTGTGACTGTGGGTGTGAGGTGTGACTGTGAGGCGGGGACTGCAGGTGTGACTGTGAGGCGTGGACTGTGAGGTGTGACTGTGAGGCGTGGACTGTGAGGTGTGACTGAGGTGTGACTGAGGTGTGACTGTGAGGCGTGGACTGTGAGGTGTGACTGTGAGGCGTGGACTGTGAGGCGGGGACTGTGAGGTGTGACTGTGAGGTGTGGACTGAGGTGTGACGGAGGTGTGACTGTGAGGTGTGACTGTGAGGTGTGACTGTGAGGCGTGGACTGTGAGGTGTGACTGTGAGGCGTGGACTGTGAGGTGTGACTGTGAGGCGTGGACTGTGAGGTGTGACTGAGGTGTGACTGTGGGTGTGAGGTGTGACTGTGAGGCGTGGACTGAGGTGGTGACTGTGAGGCGTGGACTGTGAGGTGTGACTGTGAGGTGTGGACTGTGAGGTGTGACTGTGAGGTGTGACTGTGAGGCGTGGAGTTCAGAGGTGTGACTGTGAGGCGTGGACTGAGGTGTGACTGTGAGGTGTGACTGTGGGTGTGAGGTGTGACTGTGAGGCGTGGACTGTGAGGTGTGACTGTGAGTGGGGCGTGGACTGTGAGGTGTGACTGTGAGGCGTGGACTGTGAGGTGTGACTGTGAGGTGTGACTGTGAGGCGTGGACTGTGGAGGCGTGGACTGTGAGGTGGTGACTGTGAGGAGGTGTGACTGTGAGGCGTGGACTGTGAGGTGTGACTGTGAGGCGTGGACTGTGAGGTGTGACTGTGAGGCG TR:VR 59:6 19:0 chrY 56851466 i_2206 A . Too_low_VAF END=56851467;SVTYPE=INS;SVINSLEN=238;SVINSSEQ=TGGGACTCTTCTACTTGTGATAGGCTCTGCCTACCCAGGGGGAAGTCTTGTCTATTGTGCATTGTGTCATAACTCTGCACTGATCACCCAGGTGATGTAACTCTTGTCTAGGCTCTGTCTACAGGGGAATTTTGTGACATATCACTGCACTGATCACCCTAGGTGATGTAACTCCTTGTATAGGCTTTGCCCACAGAAGGCTTTGTGACATATCTATGCACTGATCTCTGAGGTGATG TR:VR 326:5 131:1 chr10 39559210 i_163 T . PASS END=39559210;SVTYPE=INS;SVINSLEN=1360;SVINSSEQ=GCAAGTGGAGATTTCAAGAGATTTGAGGCCAATGGTAGAAATGGAAATATCTTCGTATAAAAACTAGACAGAATCATTCTCAGAAACTGCTTTGTGATGTGTGCGTTCAACTCACTGAGTTGAAGCTTTCTTATCATAGAGCAGTTTGGAAACACTCTATTTGTAAAGTCTGCAAGTGGATATTTGGACCTCTTAGAGGCCTTCGTTGGAAACGGGATTTCTTCATATAATGCTAGACAGAAGAATTCTCAGTAAGTTCTTTGTGTTGTGTGTATTCAACTCACAGAGTTGAACCTTCCTTTAGACACAGCAGATTCGAAACTTTCTTTTTGTGGAATTTGCAGCTGGAGTTTTCAAGCTCTTTGAGGCCAACGGTAGAAAAGGAAATATCTTCCTATAAAAACTAGACAGAATCATTCTCAGAAACTACTTTGTGATGTGCACGTTCAACTCACAGAGTTTAACCTTTCTTTTAATTGAGCAGTTTGGAAACACTCTGTTTGTAAAGTCTGCAAGTGGATATTTGGACCTCTTTGAGCCCTTCGTTGGAAACGGGATTTCTTCATATAATGCTAGACAGAAGAATTCTCAGTAACTTCTTTGTGTTGTGTGTATTCAACTCACAGAGTTGAACTTTATTTAGACAGAGCAGATTGGAAACTCTCTTTTCGTGGAATTTGCAAGTGGAGATTTCAAGCGATTTGAGGCCAATGGTAGAAAAGGAAATATCTTCGTATAAAAACTAGACAGAATCATTCTCAGAAACTACTTTGTGATGTGTGCATTCAAATCACACAGTTTAACCTTTCTTTTCATAGAGCAGTTTGGAAACACTCTGTTTGTAAAGTCTGCAAGTGGATATTTGGACCTCTTTGAGGCCTTCGTTGGAAACGGGATTTCTTCATTTAATGCTAGACAGAAGAATTCTCAGTAAATTCTTTCTGTTGTGTGTATTCAACACACAGAATTGAACCTTCCTTTAGACAGAGCAGATATGAAACTCTCTTTTTGTGGAATTTTCAGATGGAGATTTCAAGCAAATTGAGGACAATGTTAAGAAACGAAATTTCTTCGTATAGAATCTAGACAGAATCATTCTCAGAAACTACTTTGTGATGTGTGCGTTCATCTCACAGAGTTTAACCGTTTCTTTTCATAGAGCAGTTTGGAAAAACTCTATTTGTAACGTCTCCTAGTGGATATTTGGACCTCTTTGAGGCCTTCGTTGGAAACGGGATTTCTTCATATAGTGCTAGACAGAAGAATTCTCAGTAACTTCTTTGTGTTGTGTGTATTCAACTCACAGAGTTGAACCTTCCTTTAGACAGAGCATTGTTGAAACACTCTGTTTGTGGAATTT TR:VR 64:4 18:0 chr11 58690560 r_50 C . PASS END=60412800;SVTYPE=DEL;SVLEN=-1722240 TR:VR 150:9 41:0 chr13 21851091 r_105_0 T TATCGCACTGACATAAAATAAAGCAGCTGACATAAAATTCATAAAATAAA]chr13:31131486] . PASS SVTYPE=BND;MATEID=r_105_1;SVINSLEN=49;SVINSSEQ=ATCGCACTGACATAAAATAAAGCAGCTGACATAAAATTCATAAAATAAA TR:VR 155:9 44:0 chr13 31131486 r_105_1 C CTTTATTTTATGAATTTTATGTCAGCTGCTTTATTTTATGTCAGTGCGAT]chr13:21851091] . PASS SVTYPE=BND;MATEID=r_105_0;SVINSLEN=49;SVINSSEQ=TTTATTTTATGAATTTTATGTCAGCTGCTTTATTTTATGTCAGTGCGAT TR:VR 155:9 44:0 chr18 106933 d_1026 G . Too_low_VAF END=107013;SVTYPE=DEL;SVLEN=-80;SVINSLEN=12;SVINSSEQ=TTGATGTAACCC TR:VR 410:9 152:1 chrY 56837833 d_2342 T . Too_low_VAF END=56837858;SVTYPE=INS;SVINSLEN=26;SVINSSEQ=GCCTATTGTGGGCATTGTCACATATT TR:VR 660:6 278:1 chr11 58690716 r_51_0 T [chr11:58910469[T . PASS SVTYPE=BND;MATEID=r_51_1 TR:VR 160:12 54:0 chr11 58910469 r_51_1 T [chr11:58690716[T . PASS SVTYPE=BND;MATEID=r_51_0 TR:VR 160:12 54:0 chr13 22140218 r_106_0 A ATATATAATATATATATATATAAAGAATAAATCCACTATATATATACACC]chr6:78246679] . PASS SVTYPE=BND;MATEID=r_106_1;SVINSLEN=49;SVINSSEQ=TATATAATATATATATATATAAAGAATAAATCCACTATATATATACACC TR:VR 81:10 37:0 chr6 78246679 r_106_1 A AGGTGTATATATATAGTGGATTTATTCTTTATATATATATATATTATATA]chr13:22140218] . PASS SVTYPE=BND;MATEID=r_106_0;SVINSLEN=49;SVINSSEQ=GGTGTATATATATAGTGGATTTATTCTTTATATATATATATATTATATA TR:VR 81:10 37:0 chr22 10924573 r_285_0 G ]chr4:189282819]AGGCGAAAGATGTATATA . PASS SVTYPE=BND;MATEID=r_285_1;SVINSLEN=17;SVINSSEQ=AGGCGAAAGATGTATAT TR:VR 34:3 34:1 chr4 189282819 r_285_1 A AATATACATCTTTCGCCT[chr22:10924573[ . PASS SVTYPE=BND;MATEID=r_285_0;SVINSLEN=17;SVINSSEQ=ATATACATCTTTCGCCT TR:VR 34:3 34:1 chr22_KI270737v1_random 60058 d_1617 A . PASS END=60190;SVTYPE=INS;SVINSLEN=133;SVINSSEQ=TGGAATGGAATCATCATTGAAAGTAATCGAAGTGAATCATTGAATGGAATCGAATTGAGTCATCGAATTGAATCGAATGGAATCATCACCGAATGGACTCGAATGGAATCATCATGGGATGGAAATCGAATGG TR:VR 57:5 12:0 chrUn_KI270756v1 69632 i_2097 A . Too_small_size END=69632;SVTYPE=INS;SVINSLEN=41;SVINSSEQ=TTCCATTCGATTCCATTGTGGTCCCTTCCATTCGATACCGT TR:VR 16:4 2:0 chr12 71859912 r_91_0 T [chrX:49139563[CTTCTAGTATTTTTATAGTGTTGGGTGTTTTGTTTAAGACT . PASS SVTYPE=BND;MATEID=r_91_1;SVINSLEN=40;SVINSSEQ=CTTCTAGTATTTTTATAGTGTTGGGTGTTTTGTTTAAGAC TR:VR 65:5 36:1 chrX 49139563 r_91_1 T [chr12:71859912[GTCTTAAACAAAACACCCAACACTATAAAAATACTAGAAGT . PASS SVTYPE=BND;MATEID=r_91_0;SVINSLEN=40;SVINSSEQ=GTCTTAAACAAAACACCCAACACTATAAAAATACTAGAAG TR:VR 65:5 36:1 chr15 43605121 r_159_0 C ]chr22:35490284]A . PASS SVTYPE=BND;MATEID=r_159_1 TR:VR 80:38 49:0 chr22 35490284 r_159_1 A A[chr15:43605121[ . PASS SVTYPE=BND;MATEID=r_159_0 TR:VR 80:38 49:0 chr20 30425128 r_265_0 C CCCTTAAAAGCTAAATTAATGTCTAAAAGTGACGATTGTATGTATGATGTGTGGGTGTGCGCA[chr7:154574279[ . Too_low_VAF SVTYPE=BND;MATEID=r_265_1;SVINSLEN=62;SVINSSEQ=CCTTAAAAGCTAAATTAATGTCTAAAAGTGACGATTGTATGTATGATGTGTGGGTGTGCGCA TR:VR 267:5 94:1 chr7 154574279 r_265_1 T ]chr20:30425128]TGCGCACACCCACACATCATACATACAATCGTCACTTTTAGACATTAATTTAGCTTTTAAGGT . Too_low_VAF SVTYPE=BND;MATEID=r_265_0;SVINSLEN=62;SVINSSEQ=TGCGCACACCCACACATCATACATACAATCGTCACTTTTAGACATTAATTTAGCTTTTAAGG TR:VR 267:5 94:1 chr11 58906875 r_53 G . PASS END=63520673;SVTYPE=DUP;SVLEN=4613798 TR:VR 138:16 53:0 chr14_GL000225v1_random 25804 d_422 T . Too_low_VAF END=26363;SVTYPE=DEL;SVLEN=-559;SVINSLEN=13;SVINSSEQ=CTGTAACACTCAT TR:VR 361:4 167:1 chr15 44280414 r_160 G . Too_low_VAF END=44306603;SVTYPE=DUP;SVLEN=26189 TR:VR 100:3 40:0 chr11 58908030 r_54 T . PASS END=63764877;SVTYPE=DEL;SVLEN=-4856847 TR:VR 130:15 41:0 chr13 31114434 r_108 C . PASS END=31241578;SVTYPE=DUP;SVLEN=127144 TR:VR 137:12 47:0 chr15 46163684 r_161 A . PASS END=48835933;SVTYPE=DEL;SVLEN=-2672249 TR:VR 88:20 32:0 chr17 9356983 r_180 T . PASS END=9369944;SVTYPE=DEL;SVLEN=-12961 TR:VR 64:10 19:0 chr18 10998982 r_195 A . PASS END=13116804;SVTYPE=DEL;SVLEN=-2117822;SVINSLEN=2;SVINSSEQ=AG TR:VR 77:8 40:0 chr19 27370112 r_229_0 C [chr19:27373005[GTGTAGTTTTTATGTGAAGATATTTCCTTTTCTGCCATAGAACACAAAGGGGTCAAAATATCCACTTGCAGATACTAAAAAAAGGAGTTTCAAAACTTCTCCATCAAAAGATAGGTTTAACTCTGTCAGTTGAATGCAGAA . Too_low_VAF SVTYPE=BND;MATEID=r_229_1;SVINSLEN=140;SVINSSEQ=GTGTAGTTTTTATGTGAAGATATTTCCTTTTCTGCCATAGAACACAAAGGGGTCAAAATATCCACTTGCAGATACTAAAAAAAGGAGTTTCAAAACTTCTCCATCAAAAGATAGGTTTAACTCTGTCAGTTGAATGCAGA TR:VR 179:4 64:1 chr19 27373005 r_229_1 A [chr19:27370112[TCTGCATTCAACTGACAGAGTTAAACCTATCTTTTGATGGAGAAGTTTTGAAACTCCTTTTTTTAGTATCTGCAAGTGGATATTTTGACCCCTTTGTGTTCTATGGCAGAAAAGGAAATATCTTCACATAAAAACTACACA . Too_low_VAF SVTYPE=BND;MATEID=r_229_0;SVINSLEN=140;SVINSSEQ=TCTGCATTCAACTGACAGAGTTAAACCTATCTTTTGATGGAGAAGTTTTGAAACTCCTTTTTTTAGTATCTGCAAGTGGATATTTTGACCCCTTTGTGTTCTATGGCAGAAAAGGAAATATCTTCACATAAAAACTACAC TR:VR 179:4 64:1 chr5 144951450 r_331_0 T TTTTTTTTTTTTTTT[chr6:113605763[ . PASS SVTYPE=BND;MATEID=r_331_1;SVINSLEN=14;SVINSSEQ=TTTTTTTTTTTTTT TR:VR 87:6 38:1 chr6 113605763 r_331_1 T ]chr5:144951450]AAAAAAAAAAAAAAT . PASS SVTYPE=BND;MATEID=r_331_0;SVINSLEN=14;SVINSSEQ=AAAAAAAAAAAAAA TR:VR 87:6 38:1 chr8 124129404 r_375_0 G G]chrX:45965632] . PASS SVTYPE=BND;MATEID=r_375_1 TR:VR 93:18 44:0 chrX 45965632 r_375_1 G G]chr8:124129404] . PASS SVTYPE=BND;MATEID=r_375_0 TR:VR 93:18 44:0 chr8 23898512 i_1907 C . PASS END=23898512;SVTYPE=INS;SVINSLEN=141;SVINSSEQ=ACACGTATATATGTATACATATATATACACACGTATATATGTATACATATATATACACACGTATATATGTATACATATATATACACACGTATATATGTATACATATATATACACACGTATATATGTATACATATATATATA TR:VR 36:3 23:0 chrX 339456 i_2109 T . PASS END=339456;SVTYPE=INS;SVINSLEN=157;SVINSSEQ=GAGAGGGGATAGAGCCGGGGGGTGAGGGGAGGAGCTTGGGGGGGTGAGGGGAGGAGCCGGGGGGGGTGAGGGGAGGAGCCGGGGGGTGAGAGGGGAGGAGCGGGGGGGTGAGAGGGGAGGAGCCGGGGGGGTGAGAGGGGAGGCGGCCGGGGGTGAG TR:VR 14:3 13:0 chr1 12415598 r_1_0 G [chr20:36999527[CT . Too_low_VAF SVTYPE=BND;MATEID=r_1_1;SVINSLEN=1;SVINSSEQ=C TR:VR 92:4 49:1 chr20 36999527 r_1_1 T [chr1:12415598[GT . Too_low_VAF SVTYPE=BND;MATEID=r_1_0;SVINSLEN=1;SVINSSEQ=G TR:VR 92:4 49:1 chr11 58908451 r_55 T . PASS END=61073764;SVTYPE=DUP;SVLEN=2165313 TR:VR 143:12 50:0 chr13 31458310 r_109_0 T ]chr6:71899300]AATTATTTACAATTATTTAATT . PASS SVTYPE=BND;MATEID=r_109_1;SVINSLEN=21;SVINSSEQ=AATTATTTACAATTATTTAAT TR:VR 124:10 43:0 chr6 71899300 r_109_1 T TATTAAATAATTGTAAATAATT[chr13:31458310[ . PASS SVTYPE=BND;MATEID=r_109_0;SVINSLEN=21;SVINSSEQ=ATTAAATAATTGTAAATAATT TR:VR 124:10 43:0 chr14 38893973 r_128_0 A AAGAGGTTAATA]chr9:10794414] . PASS SVTYPE=BND;MATEID=r_128_1;SVINSLEN=11;SVINSSEQ=AGAGGTTAATA TR:VR 67:5 49:0 chr9 10794414 r_128_1 C CTATTAACCTCT]chr14:38893973] . PASS SVTYPE=BND;MATEID=r_128_0;SVINSLEN=11;SVINSSEQ=TATTAACCTCT TR:VR 67:5 49:0 chr15 53797177 d_812 C . Too_small_size END=53797214;SVTYPE=DEL;SVLEN=-37 TR:VR 40:12 21:0 chr18 6939126 r_191 G . PASS END=41249054;SVTYPE=DEL;SVLEN=-34309928 TR:VR 137:25 38:0 chr3 198103031 i_1530 G . PASS END=198103031;SVTYPE=INS;SVINSLEN=250;SVINSSEQ=AGAGACGCGTGCAAATTTAGATTCCCCTGCAGGATGTGGACAGTGGGAGGGGAACGCGATGCAAATTTAGATTCCGCTGCAGGATGTGGACAGTGGGAGGGGAGACGCATGCAAATTTAGATTCCGCTGCAGGATGTGGACAGTGGGAGGGAGACGCGTGCAAATTTAGATTCCCCTGCAGGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATTTAGATTCTGCTACAGGATGTGGACAGTGGGAGAG TR:VR 60:3 35:0 chr8 124129410 r_376_0 C [chrX:45965731[G . PASS SVTYPE=BND;MATEID=r_376_1 TR:VR 93:39 44:0 chrX 45965731 r_376_1 G [chr8:124129410[G . PASS SVTYPE=BND;MATEID=r_376_0 TR:VR 93:39 44:0 chr11 58909630 r_56_0 T T]chr13:18021750] . Too_low_VAF SVTYPE=BND;MATEID=r_56_1 TR:VR 216:8 88:0 chr13 18021750 r_56_1 C C]chr11:58909630] . Too_low_VAF SVTYPE=BND;MATEID=r_56_0 TR:VR 216:8 88:0 chr13 31548787 r_110_0 A [chr13:38878690[A . PASS SVTYPE=BND;MATEID=r_110_1 TR:VR 107:12 40:0 chr13 38878690 r_110_1 A [chr13:31548787[A . PASS SVTYPE=BND;MATEID=r_110_0 TR:VR 107:12 40:0 chr18 70294200 r_211_0 C [chr22:25125604[A . PASS SVTYPE=BND;MATEID=r_211_1 TR:VR 117:11 46:0 chr22 25125604 r_211_1 A [chr18:70294200[A . PASS SVTYPE=BND;MATEID=r_211_0 TR:VR 117:11 46:0 chr19 27379548 d_1133 C . Too_low_VAF END=27379977;SVTYPE=DEL;SVLEN=-429;SVINSLEN=90;SVINSSEQ=TTCACATAAAAACTACACAGAAGCGTTCTGAGAAACTTCTTTGTGATGTGTGCATTCATCTCACAGAGTTGAACATTTCTTTTGATTGAG TR:VR 137:4 51:1 chr2 87410635 d_1206 G . Too_low_VAF;Too_small_size END=87410631;SVTYPE=INS;SVINSLEN=12;SVINSSEQ=CCAGACAGCCAG TR:VR 191:3 97:1 chr20 64171791 r_267_0 A [chrX:143833390[A . PASS SVTYPE=BND;MATEID=r_267_1 TR:VR 80:10 33:0 chrX 143833390 r_267_1 A [chr20:64171791[A . PASS SVTYPE=BND;MATEID=r_267_0 TR:VR 80:10 33:0 chr5 14696365 r_319_0 T T]chr5:22481862] . PASS SVTYPE=BND;MATEID=r_319_1 TR:VR 125:31 42:0 chr5 22481862 r_319_1 T T]chr5:14696365] . PASS SVTYPE=BND;MATEID=r_319_0 TR:VR 125:31 42:0 chr11 58911266 r_57_0 T TCC]chr11:61071844] . PASS SVTYPE=BND;MATEID=r_57_1;SVINSLEN=2;SVINSSEQ=CC TR:VR 141:12 52:0 chr11 61071844 r_57_1 T TGG]chr11:58911266] . PASS SVTYPE=BND;MATEID=r_57_0;SVINSLEN=2;SVINSSEQ=GG TR:VR 141:12 52:0 chr12 124230465 r_95_0 A A]chr12:124405835] . PASS SVTYPE=BND;MATEID=r_95_1 TR:VR 123:13 46:0 chr12 124405835 r_95_1 G G]chr12:124230465] . PASS SVTYPE=BND;MATEID=r_95_0 TR:VR 123:13 46:0 chr14_GL000225v1_random 93101 d_627 C . Too_low_VAF END=95230;SVTYPE=DEL;SVLEN=-2129;SVINSLEN=9;SVINSSEQ=AGGTGATGC TR:VR 823:3 654:1 chr18 70461158 i_855 T . PASS END=70461158;SVTYPE=INS;SVINSLEN=481;SVINSSEQ=AAAAACTTTTATTTTTATTTTATAAAAATAAAACTTTTATTTTTTTATTTTATAAAAATAAAACTTTTATTTTTATTTTATAAAAATAAAACTTTTATTTTTATTTTATAAAAATAAAACTTTTATTTTTATTTTATAAAAATAAAACTTTTATTTTTATTTTATAAAAATAAAACTTTTATTTTTATTTTATAAAAATAAAACTTTTATTTTTATTTTATAAAAATAAAACTTTTATTTTTATTTTATAAAAATAAACTTTTATTTTTATTTTATAAAATAAAAACTTTTATTTTTATTTTATAAAAATAAAACTTTTATTTTTATTTTATAAAAAATAAAACTTTTATTTTTTATTTTTATAAAAATAAAACTTTTATTTTTATTTTATAAAAATAAACTTTTATTTTTATTTTATAAAAATAAAACTTTTATTTTTATTTTATAAAAATAAAACTTTATTTTTATTTTATAAAAATAA TR:VR 96:14 15:0 chr19 27379599 d_1134 T . Too_low_VAF END=27379874;SVTYPE=DEL;SVLEN=-275;SVINSLEN=105;SVINSSEQ=GTATTCATCTCACAGAGTTGAAACATTCTTTTGATTGAGCAGTTTGAAACACTCTTTTTGTAGAATCTGCAAGTGGATATTTGGAGCGCTTTGAGGCCTATTGTG TR:VR 137:4 51:1 chr5 14696379 r_320_0 G [chr5:22481885[CCA . PASS SVTYPE=BND;MATEID=r_320_1;SVINSLEN=2;SVINSSEQ=CC TR:VR 125:31 42:0 chr5 22481885 r_320_1 A [chr5:14696379[GGA . PASS SVTYPE=BND;MATEID=r_320_0;SVINSLEN=2;SVINSSEQ=GG TR:VR 125:31 42:0 chr7 55842372 r_350 C . Too_low_VAF END=62158663;SVTYPE=DUP;SVLEN=6316291 TR:VR 98:3 37:0 chr11 59633244 r_58_0 C [chr11:59879373[T . Too_low_VAF SVTYPE=BND;MATEID=r_58_1 TR:VR 132:5 47:0 chr11 59879373 r_58_1 T [chr11:59633244[T . Too_low_VAF SVTYPE=BND;MATEID=r_58_0 TR:VR 132:5 47:0 chr13 31703748 r_111_0 C CTGCTTAA]chr13:32056599] . PASS SVTYPE=BND;MATEID=r_111_1;SVINSLEN=7;SVINSSEQ=TGCTTAA TR:VR 107:10 51:0 chr13 32056599 r_111_1 T TTTAAGCA]chr13:31703748] . PASS SVTYPE=BND;MATEID=r_111_0;SVINSLEN=7;SVINSSEQ=TTAAGCA TR:VR 107:10 51:0 chr17 304902 r_178 A . PASS END=305135;SVTYPE=DUP;SVLEN=233;SVINSLEN=90;SVINSSEQ=GCGGGGAGGGGACAGGGCGGGGGAGGGGGACAGGGCGAGAGGGGACAGGGCGGGGAGGGGGACAGGGGAGCGGGGAGACAGGGCGGGAGG TR:VR 36:5 11:0 chr17_GL000205v2_random 1019 i_757 G . Too_low_VAF END=1019;SVTYPE=INS;SVINSLEN=237;SVINSSEQ=GGACAAACACTGAGAATCTAGCAAGTGTGTTCTGCAACCCTATGTGAGGGACAGACATTCAGACCACAGCAGGAGTGTTCTGGAATCCTATGTGAGGGACAAACACTCAGACAATCGTAGCAGTGTTGTGGGAATCCTAAGTGAGGGACAAAATTCAGACCCATCGTATCACTGTTCTGGATCCGAAGTGAGGGATAAACATTCAGACCACAACAGAGTGTTCTGGAATCCACATGG TR:VR 211:9 76:1 chr18 115328 r_187 G . PASS END=40758480;SVTYPE=DUP;SVLEN=40643152;SVINSLEN=14;SVINSSEQ=CCTGGAAACAGGAT TR:VR 119:12 36:0 chr6 71554901 r_341 A . PASS END=77565902;SVTYPE=DUP;SVLEN=6011001 TR:VR 105:29 42:0 chr11 59881579 r_59_0 G [chr11:63762249[T . Too_low_VAF SVTYPE=BND;MATEID=r_59_1 TR:VR 115:5 38:0 chr11 63762249 r_59_1 T [chr11:59881579[T . Too_low_VAF SVTYPE=BND;MATEID=r_59_0 TR:VR 115:5 38:0 chr12 127271549 r_96 T . PASS END=127470509;SVTYPE=DEL;SVLEN=-198960 TR:VR 67:8 37:0 chr12 82548921 d_338 C . Too_small_size END=82548958;SVTYPE=DEL;SVLEN=-37 TR:VR 32:10 21:0 chr18 1391549 r_188_0 A ]chr2:32870561]A . Too_low_VAF SVTYPE=BND;MATEID=r_188_1 TR:VR 99:3 48:1 chr2 32870561 r_188_1 A A[chr18:1391549[ . Too_low_VAF SVTYPE=BND;MATEID=r_188_0 TR:VR 99:3 48:1 chr18 7059190 r_192 A . PASS END=14800999;SVTYPE=DUP;SVLEN=7741809 TR:VR 90:13 33:0 chr18 78699611 r_221_0 A [chr18:78702710[G . PASS SVTYPE=BND;MATEID=r_221_1 TR:VR 168:60 26:0 chr18 78702710 r_221_1 G [chr18:78699611[G . PASS SVTYPE=BND;MATEID=r_221_0 TR:VR 168:60 26:0 chr21 37112524 r_280_0 G G[chr3:198122876[ . Too_low_VAF SVTYPE=BND;MATEID=r_280_1 TR:VR 200:4 93:0 chr3 198122876 r_280_1 G ]chr21:37112524]G . Too_low_VAF SVTYPE=BND;MATEID=r_280_0 TR:VR 200:4 93:0 chr5 75348249 d_1845 T . PASS END=75348826;SVTYPE=DEL;SVLEN=-577 TR:VR 61:9 21:0 chr10 20106969 r_18 A . PASS END=20848680;SVTYPE=DEL;SVLEN=-741711 TR:VR 62:13 48:0 chr11 59882357 r_60_0 G G[chr21:10406516[ . Too_low_VAF SVTYPE=BND;MATEID=r_60_1 TR:VR 259:10 100:0 chr21 10406516 r_60_1 T ]chr11:59882357]T . Too_low_VAF SVTYPE=BND;MATEID=r_60_0 TR:VR 259:10 100:0 chr13 36400732 r_112_0 A ]chr6:69108274]G . PASS SVTYPE=BND;MATEID=r_112_1 TR:VR 94:27 40:0 chr6 69108274 r_112_1 G G[chr13:36400732[ . PASS SVTYPE=BND;MATEID=r_112_0 TR:VR 94:27 40:0 chr16 34182666 d_862 G . Too_low_VAF END=34184145;SVTYPE=DEL;SVLEN=-1479;SVINSLEN=111;SVINSSEQ=TTTTTATGTGAAGATATTTCCTTTTTTGACCATAGGCCTCCAAGTGTTCACAAATATCCCTTTGCAGATTCTACAAAAAGACTCTTTACACATTGCTCAATCAAAAGAATA TR:VR 108:3 39:1 chr18 7089658 r_193_0 G G]chr18:7866651] . PASS SVTYPE=BND;MATEID=r_193_1 TR:VR 99:14 43:0 chr18 7866651 r_193_1 A A]chr18:7089658] . PASS SVTYPE=BND;MATEID=r_193_0 TR:VR 99:14 43:0 chr2 87416276 d_1208 C . Too_low_VAF END=87416428;SVTYPE=DEL;SVLEN=-152 TR:VR 230:11 118:0 chr11 38496324 r_38_0 T [chr11:107259153[AACCAATGTGCCCC . PASS SVTYPE=BND;MATEID=r_38_1;SVINSLEN=13;SVINSSEQ=AACCAATGTGCCC TR:VR 120:16 45:0 chr11 107259153 r_38_1 C [chr11:38496324[GGGCACATTGGTTC . PASS SVTYPE=BND;MATEID=r_38_0;SVINSLEN=13;SVINSSEQ=GGGCACATTGGTT TR:VR 120:16 45:0 chr11 59882480 r_61_0 T [chr11:61076136[A . PASS SVTYPE=BND;MATEID=r_61_1 TR:VR 134:7 48:0 chr11 61076136 r_61_1 A [chr11:59882480[A . PASS SVTYPE=BND;MATEID=r_61_0 TR:VR 134:7 48:0 chr13 37584246 r_113 C . PASS END=61568892;SVTYPE=DEL;SVLEN=-23984646;SVINSLEN=19;SVINSSEQ=AGAGACTACTATATATAGT TR:VR 91:28 47:0 chr18 15293329 r_196_0 G G]chr22:15786387] . PASS SVTYPE=BND;MATEID=r_196_1 TR:VR 105:6 56:0 chr22 15786387 r_196_1 T T]chr18:15293329] . PASS SVTYPE=BND;MATEID=r_196_0 TR:VR 105:6 56:0 chr2 136790162 r_251_0 A [chr20:64171278[A . PASS SVTYPE=BND;MATEID=r_251_1 TR:VR 90:7 37:0 chr20 64171278 r_251_1 A [chr2:136790162[A . PASS SVTYPE=BND;MATEID=r_251_0 TR:VR 90:7 37:0 chr20 64187238 i_1290 C . PASS END=64187239;SVTYPE=INS;SVINSLEN=363;SVINSSEQ=GTGGAGACTTTTCCTGTAGCCTGTGGCCCCGGCATCCATGTTTCCGTGGAGAGTTTTCCTGTAGCACGTGGCTCCGGCATCCACGTTTCCGTGGAGATTTTCCTGTAGCCTGTGGCCCCGGCATCCACGTTTCCGTGGAGAGATTTCCTGTAGCCCGTGGCTCCCGGCATCCACGTTTCCGTGGAGACTTTTCCTGTAGCCCGTGGCCCCGGCATCCATGTTTCCGTGGAGGAGTTTTCCTGTGGCACGTGGCCCCGGCATCCACGTTTCGTGGAGAGTTTTCCTGTAGCCCATGGCCCCGGCATCCACGTTTCCGTGGAGACTTTTCCTGTAGCCCGTGGCCCCCGGCATCCACGTTTCCGT TR:VR 50:3 17:0 chr7 56368881 d_1950 A . PASS END=56368921;SVTYPE=INS;SVINSLEN=55;SVINSSEQ=CGCTGACCCTCTCGGCGTGGGAGGGGCCGGTGAGGAGGCAAGGGGCTCACGCTGA TR:VR 142:12 56:1 chrX 56353224 r_385_0 A [chrX:56483141[CACACCAACAGTGT . PASS SVTYPE=BND;MATEID=r_385_1;SVINSLEN=13;SVINSSEQ=CACACCAACAGTG TR:VR 50:9 40:0 chrX 56483141 r_385_1 T [chrX:56353224[CACTGTTGGTGTGT . PASS SVTYPE=BND;MATEID=r_385_0;SVINSLEN=13;SVINSSEQ=CACTGTTGGTGTG TR:VR 50:9 40:0 chr10 2521764 i_131 C . Too_low_VAF END=2521764;SVTYPE=INS;SVINSLEN=504;SVINSSEQ=ATTTGACACCCACACACACCCACACACCCACACCCACACACCCACACCCACACCCACACCCACACCCACACCCACACCCACACCCACACCCACACCCACACCCACACCCACACCCACACCCACACCCACACCCACACCCACACCCACACCCACACCCACACCCACACCCACACCCACACCCACACCCACACCCACACCCACACCCACACCCCACACCCACACCCCACACCCCACACCCCACACCCCACACCCCACACCCCACACCCACACCCCACACCCACACCCACACCCACACCCACACCCACACCCACACCCACACCCACACCACCTTTTTTCTGTGTCTTCAGGGCCTATTTCCCTTATTCGTAGATGACACCTACTCTGTTAAAATTTCTCCAGAGGGTGAGTCAGCCCCAGGCCCTCTTTTAAAGCAACAAAAACATCACATTTATCCAGGCTCTGCCACATAACCTAAGCATCCCTTGTGTTGCCCCACTCCTAATA TR:VR 136:3 101:1 chr11 116233977 r_85 C . PASS END=117478591;SVTYPE=DEL;SVLEN=-1244614 TR:VR 85:20 43:0 chr11 38591204 r_39_0 T TGAGTGGCAAGTATATTGTGGA]chr11:42697035] . PASS SVTYPE=BND;MATEID=r_39_1;SVINSLEN=21;SVINSSEQ=GAGTGGCAAGTATATTGTGGA TR:VR 123:24 39:0 chr11 42697035 r_39_1 T TTCCACAATATACTTGCCACTC]chr11:38591204] . PASS SVTYPE=BND;MATEID=r_39_0;SVINSLEN=21;SVINSSEQ=TCCACAATATACTTGCCACTC TR:VR 123:24 39:0 chr11 61072316 r_62_0 C [chr11:62064652[G . PASS SVTYPE=BND;MATEID=r_62_1 TR:VR 117:11 54:0 chr11 62064652 r_62_1 G [chr11:61072316[G . PASS SVTYPE=BND;MATEID=r_62_0 TR:VR 117:11 54:0 chr14 60936013 r_129 G . Too_low_VAF END=76189384;SVTYPE=DUP;SVLEN=15253371 TR:VR 67:3 55:1 chr18 71216838 r_212_0 C [chr18:71219322[A . PASS SVTYPE=BND;MATEID=r_212_1 TR:VR 129:52 30:0 chr18 71219322 r_212_1 A [chr18:71216838[A . PASS SVTYPE=BND;MATEID=r_212_0 TR:VR 129:52 30:0 chr18 79505662 i_945 T . PASS END=79505662;SVTYPE=INS;SVINSLEN=410;SVINSSEQ=GGAAGAGGCAGGAGACTGCTGTGTGAGGAGGAGGTGAGTTGGGAGGCCCTTGGGTGAGGGAAGAGGCAGGAGACTGCTGCGTGGGGAGGAGGTGGAAAGGAGGCCCTTGGGTGAGGGAAGAGGCAGGAGACTGCTGTGTGGGAGGAGAGGTGGTGGATGAGACCCATGGGTGATGGAAGAGGCAGGAGACTGCTGCGTGGGGAGGAGGTGGTGGGACGAGACCCTTGGGTGATGGAAGAGTGCAGGAGACTGCTGTGTGGGAGGAGGTGGTGCTGGGAGGCTGCCCTTGGGTGAGGGAAGAGGCAGGAGACTGCTGCGTGGGAGGAGGTGGTGCTGGAGGCCTTGGGTGAGGGAAGAGGCAGGAGACTGCTGTGTGGGAGGAGGTGGTGGATGAGACCCTTGGGGTGAGG TR:VR 243:19 20:0 chr21 7286956 d_1446 T . PASS END=7287249;SVTYPE=DEL;SVLEN=-293;SVINSLEN=130;SVINSSEQ=TATTTGTGTATTCAACACACAGAGTTCAACCTATGTTTTGATACAGCAGTCTTGAAACTCTCTTTTTGTAGAATCTGCAAGTGGATATTTGGAGCCCTTTGTGGCCTATGGTATGAAAAAGAAAATATCC TR:VR 197:11 76:1 chr21 8217212 r_272 C . Too_low_VAF END=8222609;SVTYPE=DUP;SVLEN=5397;SVINSLEN=2;SVINSSEQ=CA TR:VR 863:5 754:0 chr11 38874178 d_295 A . Too_small_size END=38874218;SVTYPE=DEL;SVLEN=-40 TR:VR 40:10 31:0 chr11 61176273 r_63_0 A AAAGGGCACATTGCACATTGAACCAATGACAACTAT]chr11:109974441] . PASS SVTYPE=BND;MATEID=r_63_1;SVINSLEN=35;SVINSSEQ=AAGGGCACATTGCACATTGAACCAATGACAACTAT TR:VR 120:21 42:0 chr11 109974441 r_63_1 A AATAGTTGTCATTGGTTCAATGTGCAATGTGCCCTT]chr11:61176273] . PASS SVTYPE=BND;MATEID=r_63_0;SVINSLEN=35;SVINSSEQ=ATAGTTGTCATTGGTTCAATGTGCAATGTGCCCTT TR:VR 120:21 42:0 chr5 161334324 r_333 A . PASS END=161613150;SVTYPE=DEL;SVLEN=-278826 TR:VR 68:14 48:0 chr5 46405899 i_1691 A . Too_low_VAF END=46405899;SVTYPE=INS;SVINSLEN=466;SVINSSEQ=ACATACCTTTTTACAGTGCAGTTTTCAAACACTCTTTTTGTAGGATCTGCAAATGGACATTTGGAACTCTTAGAGGGCTACGTTGGAAAAGGAAATATCATCATTCTCAGTAAACTATTGCAAGAACAGAGAACTAAACACAGTATATTCTCACTCATAGGTGGGAATTGAACATTGAAAACACATGGACACAGGAAGGGAAACATCACAGTCTGGGGACTGTTGTGTGGGTAGGGGGAGGTTGGAGGGATAGCATTGCTAGATATACCTAATGCCAGATGATGACGAGTTAGTGGGTGCTGCGCACCAGCATGGCATCTGTATACGTATATAGCTAAACTGCACATTGTGCACATGTACCCTAAAGCGTAAAGAATAATAATAATAATAAATACATAAAATAAAATAAAAAGGAAATATCTTCACATAAAAACTAGGCAGAAGCATTCTCAGAAATTTCTTCAGG TR:VR 69:3 12:0 chr6 77468453 r_342 T . PASS END=79123335;SVTYPE=DUP;SVLEN=1654882;SVINSLEN=40;SVINSSEQ=TGTAACCTTACTTACATTACTTAATAGTAGCTGTAAAATA TR:VR 122:35 33:0 chr8 40908540 r_372 A . PASS END=46568217;SVTYPE=DUP;SVLEN=5659677 TR:VR 87:6 43:0 chr9 104986848 r_378_0 T T]chrX:45992041] . PASS SVTYPE=BND;MATEID=r_378_1 TR:VR 53:26 46:0 chrX 45992041 r_378_1 G G]chr9:104986848] . PASS SVTYPE=BND;MATEID=r_378_0 TR:VR 53:26 46:0 chr11 62067260 r_64_0 A A]chr21:10403273] . Too_low_VAF SVTYPE=BND;MATEID=r_64_1 TR:VR 307:14 130:0 chr21 10403273 r_64_1 C C]chr11:62067260] . Too_low_VAF SVTYPE=BND;MATEID=r_64_0 TR:VR 307:14 130:0 chr13 41877813 r_114_0 A ATC]chr6:50065406] . PASS SVTYPE=BND;MATEID=r_114_1;SVINSLEN=2;SVINSSEQ=TC TR:VR 73:9 29:0 chr6 50065406 r_114_1 T TGA]chr13:41877813] . PASS SVTYPE=BND;MATEID=r_114_0;SVINSLEN=2;SVINSSEQ=GA TR:VR 73:9 29:0 chr15 78703123 r_162_0 C CCA]chr5:174916231] . Too_low_VAF SVTYPE=BND;MATEID=r_162_1;SVINSLEN=2;SVINSSEQ=CA TR:VR 73:3 42:0 chr5 174916231 r_162_1 G GTG]chr15:78703123] . Too_low_VAF SVTYPE=BND;MATEID=r_162_0;SVINSLEN=2;SVINSSEQ=TG TR:VR 73:3 42:0 chr18 71622780 r_214 T . PASS END=79074956;SVTYPE=DEL;SVLEN=-7452176 TR:VR 359:67 42:0 chr19 29899960 i_988 A . PASS END=29899960;SVTYPE=INS;SVINSLEN=186;SVINSSEQ=CCCCCCCCCAACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCTAGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGGCCGACCC TR:VR 47:3 37:0 chr5 105780921 r_328 C . PASS END=105836121;SVTYPE=DEL;SVLEN=-55200 TR:VR 145:17 33:0 chr9 104986861 r_379_0 T [chrX:45992040[T . PASS SVTYPE=BND;MATEID=r_379_1 TR:VR 53:14 46:0 chrX 45992040 r_379_1 T [chr9:104986861[T . PASS SVTYPE=BND;MATEID=r_379_0 TR:VR 53:14 46:0 chrUn_GL000216v2 164875 d_2117 A . Too_low_VAF END=164950;SVTYPE=INS;SVINSLEN=144;SVINSSEQ=CTCTTCCTTACGGTCTGCCTGCAGGGGCATTGCGAAATATATCTGCAATGTTCTCCAAGGTGCTGTAACTTTAGTCTAGGTCTCTGGCTACACGACATCGTGACATATAACTGCACTGATCACCCAGGAGATATAACTCTTGAC TR:VR 171:3 77:0 chr11 62067566 r_65_0 G [chr21:10740276[G . Too_low_VAF SVTYPE=BND;MATEID=r_65_1 TR:VR 242:11 64:0 chr21 10740276 r_65_1 G [chr11:62067566[G . Too_low_VAF SVTYPE=BND;MATEID=r_65_0 TR:VR 242:11 64:0 chr13 45425705 r_115_0 T T[chr5:61282023[ . PASS SVTYPE=BND;MATEID=r_115_1 TR:VR 163:10 47:0 chr5 61282023 r_115_1 A ]chr13:45425705]A . PASS SVTYPE=BND;MATEID=r_115_0 TR:VR 163:10 47:0 chr18 73821929 r_215_0 A [chrX:824249[AT . PASS SVTYPE=BND;MATEID=r_215_1;SVINSLEN=1;SVINSSEQ=A TR:VR 133:19 43:0 chrX 824249 r_215_1 T [chr18:73821929[TT . PASS SVTYPE=BND;MATEID=r_215_0;SVINSLEN=1;SVINSSEQ=T TR:VR 133:19 43:0 chr2 146263358 r_253_0 G G[chr4:15846102[ . PASS SVTYPE=BND;MATEID=r_253_1 TR:VR 68:4 58:1 chr4 15846102 r_253_1 C ]chr2:146263358]C . PASS SVTYPE=BND;MATEID=r_253_0 TR:VR 68:4 58:1 chr5 105836985 r_329_0 C C[chr9:111485161[ . PASS SVTYPE=BND;MATEID=r_329_1 TR:VR 98:16 27:0 chr9 111485161 r_329_1 C ]chr5:105836985]C . PASS SVTYPE=BND;MATEID=r_329_0 TR:VR 98:16 27:0 chr6 8536787 d_1888 A . Too_small_size END=8536822;SVTYPE=DEL;SVLEN=-35 TR:VR 55:31 15:0 chr8 40936840 r_373 A . PASS END=47121526;SVTYPE=DUP;SVLEN=6184686 TR:VR 100:19 45:0 chrUn_KI270435v1 18804 i_2043 G . PASS END=18804;SVTYPE=INS;SVINSLEN=378;SVINSSEQ=TGAACTCATCTCACAGAACTGAAACTATCATATCATTGAGCAGTTTTGAAACACTCTTTTCGTAAAATTTGCAGGTGGATATTTGGAGGGTTTGAGGCTTATTTTGGAAAAGGAAATATTTTCTAATAAAGACTACGCAGAAGCATTCTGAGAAAATTATTTAAGATGTGTGCATTCAACTCACAGAGTTGAACTTATCTTTTGATTGAGCTGTTTTGAATATCTCTTTTGCCTATCTTATCATTGAGCACTTTTCAAACACTCTTTTTGTACAATCTGCTAAAGGATATATGGAGTGCTTTGAAGCCTGTTATGGAAAAGGAAATATCTTCACGTAATAACTACACAGAAACATACTGAGAAATTTCTTGGGATATG TR:VR 51:5 23:0 chrY 56838884 d_2351 G . Too_low_VAF END=56838875;SVTYPE=INS;SVINSLEN=63;SVINSSEQ=CACTTATCACTCCTGGAGAGAGAATTCTTGGCTAGGCTCTGCCCACAGGGAGCTTTGTGACAT TR:VR 624:5 250:1 chr15 78757136 r_163 C . Too_low_VAF END=82532834;SVTYPE=DUP;SVLEN=3775698;SVINSLEN=2;SVINSSEQ=TT TR:VR 100:3 43:1 chr17 10078697 r_181_0 T T]chr17:63012923] . PASS SVTYPE=BND;MATEID=r_181_1 TR:VR 99:23 41:0 chr17 63012923 r_181_1 G G]chr17:10078697] . PASS SVTYPE=BND;MATEID=r_181_0 TR:VR 99:23 41:0 chr18 73830534 r_216 G . PASS END=74402256;SVTYPE=DEL;SVLEN=-571722;SVINSLEN=3;SVINSSEQ=GGA TR:VR 256:14 43:0 chr18 79546260 i_947 C . Too_low_VAF END=79546260;SVTYPE=INS;SVINSLEN=151;SVINSSEQ=CCTCTCCACATTCACCCACCCTCACATTCACCCTCTTCTCTCTCAGCCTCTCCACACACTCACCCTCTCCATTCACCTCCTCTCACACTCACCCTCTCCAGGCTCACCTCTCCACATTCACCCTCTCCACTCCACCCTCTCCACACTGAGC TR:VR 258:3 19:0 chr2 26333431 r_241_0 A ]chr4:89723827]AGGAGGGTGGGAAGCAC . PASS SVTYPE=BND;MATEID=r_241_1;SVINSLEN=16;SVINSSEQ=AGGAGGGTGGGAAGCA TR:VR 96:5 45:1 chr4 89723827 r_241_1 C CTGCTTCCCACCCTCCT[chr2:26333431[ . PASS SVTYPE=BND;MATEID=r_241_0;SVINSLEN=16;SVINSSEQ=TGCTTCCCACCCTCCT TR:VR 96:5 45:1 chr2 87688293 i_1064 G . PASS END=87688293;SVTYPE=INS;SVINSLEN=201;SVINSSEQ=TGATACAGACAAGAGTCAAGGAAATACTGGGTGGAAGAGGGCAGTTCCCCAGCAAACGCCCCCACCCTCAAGTCTGAAACCCGCAGCCCTAAATGGGAACAGGCATTTGTACTTTCATGCCCAAATGTGGGATCCTCCCCCATGACCCAAACACCTCCCACCAGGGCCCACCTCCAACACTGGGGATCCCATTTCAATATG TR:VR 64:7 25:0 chr21 8404831 i_1355 A . Too_low_VAF END=8404831;SVTYPE=INS;SVINSLEN=59;SVINSSEQ=CACACACACACACACACACACACACACACACACACACACACACACACACACACACACCC TR:VR 722:4 537:0 chr22 22071784 r_295 G . PASS END=22118501;SVTYPE=DUP;SVLEN=46717 TR:VR 163:19 32:0 chr12 94298520 r_92_0 T ]chr2:165701]A . PASS SVTYPE=BND;MATEID=r_92_1 TR:VR 88:8 34:0 chr2 165701 r_92_1 A A[chr12:94298520[ . PASS SVTYPE=BND;MATEID=r_92_0 TR:VR 88:8 34:0 chr13 49114022 r_116_0 A A]chr6:43015900] . PASS SVTYPE=BND;MATEID=r_116_1 TR:VR 90:21 44:0 chr6 43015900 r_116_1 T T]chr13:49114022] . PASS SVTYPE=BND;MATEID=r_116_0 TR:VR 90:21 44:0 chr17 10078700 d_924 A . PASS END=10078800;SVTYPE=DEL;SVLEN=-100 TR:VR 78:20 20:0 chr2 152370331 r_254 G . PASS END=152558783;SVTYPE=DEL;SVLEN=-188452;SVINSLEN=27;SVINSSEQ=TTTTTTTATATTCTAGTTCTTTTTATA TR:VR 84:14 32:0 chr20 31069197 d_1403 A . Too_low_VAF END=31069362;SVTYPE=DEL;SVLEN=-165 TR:VR 551:4 219:0 chr20 64287249 i_1295 G . Too_low_VAF END=64287254;SVTYPE=INS;SVINSLEN=74;SVINSSEQ=GTCCGGGTCCGGGTCGGGGTCGGGGTCGGGGTCGGGCCAGGGTCTAGGGTCGGGGTCGGTCGGGGGGTCGAATG TR:VR 201:3 126:0 chr8 1393158 d_2006 C . PASS END=1393413;SVTYPE=DEL;SVLEN=-255;SVINSLEN=27;SVINSSEQ=GTCCTCCAGAGTGGTCGTGGCTGAGTG TR:VR 29:3 19:0 chr9 120189115 d_2076 G . PASS END=120189202;SVTYPE=DEL;SVLEN=-87 TR:VR 25:11 22:0 chr10 31981414 r_19_0 C ]chr12:25382902]G . PASS SVTYPE=BND;MATEID=r_19_1 TR:VR 71:21 45:0 chr12 25382902 r_19_1 G G[chr10:31981414[ . PASS SVTYPE=BND;MATEID=r_19_0 TR:VR 71:21 45:0 chr15 82097953 r_164_0 C ]chr4:63728745]T . PASS SVTYPE=BND;MATEID=r_164_1 TR:VR 99:34 35:0 chr4 63728745 r_164_1 T T[chr15:82097953[ . PASS SVTYPE=BND;MATEID=r_164_0 TR:VR 99:34 35:0 chr18 78832500 d_1072 T . Too_low_VAF;Too_small_size END=78832479;SVTYPE=INS;SVINSLEN=31;SVINSSEQ=CTGAACTGGCTCCTCCTGCCTGGGGCTCCCA TR:VR 220:4 24:0 chr3 102808583 i_1513 G . Too_small_size END=102808583;SVTYPE=INS;SVINSLEN=27;SVINSSEQ=TTCATTTACATAGACATATATATATGT TR:VR 40:3 18:0 chr10 1238528 i_127 G . PASS END=1238528;SVTYPE=INS;SVINSLEN=645;SVINSSEQ=GTGTTGTTCCCCTCTGTCTCCCGGTGTTTACTCCCCCCTCCCTCCCGGTGTTTACTCCCCCTCTCCCTCCCGGTGTTCACTCCCTCTGCCTCCCGGTGTTCACTCCCCCTCTCCCTCCCGTATGTGTTACTCCCCCCTCCCTCCCGGTGTTCACTCCCCTCTCCCTCCCGGTGTTCCCTCCCCTCTGCCTCCCGGTGTTCTCCCCTCTCCCTCCCGGTGTTTACTCCCCTCTGCCTCCCGGTGTTCACTCCCCTCTCCCTCCCGGTGTTCACTCCCTCTGTCTCCCGGTGTTCCTCCCCTCTGCCTCCCGGTGTTCACTCCCCCTCTGCCTCCCGGTGTTCCCTCCCCCCTCCCTCCCGGTGTTTACTCCCCCCTGCCTCCCGGTGTTTACTCCCCTCTCCCTCCCGGTGTTTACTCCCCCTGCCTCCCGGTGTTCACTCCCCTCTCCCTCCCGGTGTTCACTCCCCTCTGCCTCCCGGTGTTCACTCCCCTCTGCCTCCCGGTGTTCACTCCCTCTCCCTCCCGGGTGTTCACTCCCCCCTCCCTCCCGGTGTTTACTCCCCTGCCTCCCGGTGTTACTCCCCTCTCCCTCCCGGTGTTTACTCCCCCTGCCTCCCTGGTGTTCACTCCCCTCTCCCTCCCTAG TR:VR 44:4 17:0 chr14 73377942 i_432 G . PASS END=73378036;SVTYPE=INS;SVINSLEN=519;SVINSSEQ=CCAACATAGTAAAACCCCATCTCTACTAAAAATGCAAAAAATTAGCTGGGCGTGGTGGCGGGTGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGGACCCGGAAGGCAGAGGTTGCAGTGAGCCGAGATCTTGCCATTGCACTCCAGCCTGGGCAACAATAGTGAAACTCCATCTCAAAAAAAGAAAAAAAAAAGAAAGCAGAAAACCAAAGACAAACAGAAAATCCTGAAAGAAGCCAAAGAAATAAGAACACCTTACACCTTACCCACAGTGGAACAAGCATAAAAATTCCATTGGACTACTCATCAGAAACCATGTGAACAACAAGAGAGTAGGGTGAAATATTTAATGTGTTAAAAGAAAAAAAATCCACCAATCTAGAGTTCTATAAACTATTCTTCAAAAGTGAAGGAAATTAAGAGAATGAAAAGACAACCCAAGCCACAGACCGAGAGAAAATATTTGTGAAACATATGTCTCATAAAGGGTTTGTAGCTAAAATA TR:VR 40:3 15:0 chr16 36170294 i_664 T . PASS END=36170294;SVTYPE=INS;SVINSLEN=125;SVINSSEQ=TGATGATTCCATTCGATTCCATACGATGATGATTCCATTAGAGTTCGTCCGATGACTCCTTTCGATTCCATTCAATGATAATTCCATTCTTGTCCAATCGATGATTCCATTCTATTCCAATAAAT TR:VR 34:3 19:0 chr18 24244081 r_197 A . PASS END=31627586;SVTYPE=DUP;SVLEN=7383505 TR:VR 87:13 31:0 chr2 91468166 r_245_0 C C[chr22:10691586[ . Too_low_VAF SVTYPE=BND;MATEID=r_245_1 TR:VR 308:4 116:0 chr22 10691586 r_245_1 T ]chr2:91468166]T . Too_low_VAF SVTYPE=BND;MATEID=r_245_0 TR:VR 308:4 116:0 chr5 87462173 r_325 A . PASS END=87508744;SVTYPE=DUP;SVLEN=46571 TR:VR 141:13 44:0 chrUn_KI270757v1 66236 i_2104 A . Too_low_VAF END=66236;SVTYPE=INS;SVINSLEN=258;SVINSSEQ=AGAATGGCAATCATTAAAAAGTCAGGAAACAAGAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAAAACTAGAAATACCATTTGACCCAGTCATCCCATTACTGGGTATATACCCAAAGGAATATAAATCATGCTGCTATAAAGACACATGCACACGTATATTTATTGCGGCGTTATTCACA TR:VR 491:4 186:1 chr13 108952785 d_361 T . PASS END=108952882;SVTYPE=DEL;SVLEN=-97 TR:VR 42:32 13:0 chr13 52588520 r_117_0 T T[chr18:45890920[ . PASS SVTYPE=BND;MATEID=r_117_1 TR:VR 80:19 50:0 chr18 45890920 r_117_1 A ]chr13:52588520]A . PASS SVTYPE=BND;MATEID=r_117_0 TR:VR 80:19 50:0 chr18 24363846 r_198 C . PASS END=40414045;SVTYPE=DEL;SVLEN=-16050199 TR:VR 90:15 40:0 chr2 306687 i_1025 T . PASS END=306687;SVTYPE=INS;SVINSLEN=250;SVINSSEQ=ACACACACAGGTAGCGAGAGCCGAGGTGTTAATGGCACACACAGGTAGCGAGGAGGCCGGGGTGTTAATACACACACAGGCAGCGAGGAGGCCGGGGTGTTAATACACACACAGGTAGTGAGGGAGGCCGGCGTGTTAATACACACACAGGTAGTGAGGAGGCCGGGGTGTTAATACACACACAGGTAGCGAGGAGGCCGGCGTGTTAATACACACACAGGTAGTGAGGAGGCCGGGGTGTTAATACACA TR:VR 43:3 16:0 chr22 11465048 d_1559 G . PASS END=11465192;SVTYPE=DEL;SVLEN=-144 TR:VR 21:5 3:0 chr3 10599 i_1495 T . Too_low_VAF END=10599;SVTYPE=INS;SVINSLEN=474;SVINSSEQ=AACCCTAACTATTCTCTTTTAATTTTAATTCTCTTTTACTTTTTAATTTGTGGCCTTTAATTTTAATTTTAATTTAATTTTAATTTTAATTTTAAGCAGTTTTAATTTTAATTGTTAATTTTAATTTTAATTTTAATTTTTAATTTTAATTTTAATTTTAATTTTAATTTTAATTTTAATTTTGCATTTTAATTTCAAAATTTTAATTTTAATTTAATTTTAATTTTAATTTTAATTTTAATTTTAAGCTAATTTTTTAATTTTAATTTTAATTTTAATTTTAAATTAATTTTAATTTTAATTTTAATTTTAAGATTAATTTTAATTTTAATTTTAACTTTTAATTCCTTAATTTTACATTTTAATTTTAATTTTAATTTTAATTTTAATTTTAATTTTTTTAATTTTAATTTTAATTTTAATTTCTAATGTTTTAAGATTTTAATTCCTAATTTCCTAATTTTAACTTTATAA TR:VR 438:9 276:1 chr10 34790754 d_183 T . PASS END=34792327;SVTYPE=DEL;SVLEN=-1573 TR:VR 56:3 29:0 chr11 42307890 r_40_0 G [chr8:120055681[C . PASS SVTYPE=BND;MATEID=r_40_1 TR:VR 113:9 34:0 chr8 120055681 r_40_1 C [chr11:42307890[C . PASS SVTYPE=BND;MATEID=r_40_0 TR:VR 113:9 34:0 chr11 67915976 d_304 G . PASS END=67916183;SVTYPE=DEL;SVLEN=-207;SVINSLEN=8;SVINSSEQ=GGCGGCAG TR:VR 56:9 22:0 chr13 52588524 r_118_0 T ]chr18:45890919]C . PASS SVTYPE=BND;MATEID=r_118_1 TR:VR 80:5 50:0 chr18 45890919 r_118_1 C C[chr13:52588524[ . PASS SVTYPE=BND;MATEID=r_118_0 TR:VR 80:5 50:0 chr15 83229895 i_615 C . PASS END=83229895;SVTYPE=INS;SVINSLEN=169;SVINSSEQ=TGTATATACTATGTATGGTATATAGTATATATACACACTACTGTATATACTATGTATGGTATATAGTATATATACACACTGTACTGTATATACTATGTATGGTATATAGTATATATACACACTAATATATATACTATGTATGGTATATATATATATATACACCTATTGT TR:VR 60:4 18:0 chr18 2492676 r_189_0 A [chr22_KI270736v1_random:24883[T . PASS SVTYPE=BND;MATEID=r_189_1 TR:VR 124:10 50:0 chr22_KI270736v1_random 24883 r_189_1 T [chr18:2492676[T . PASS SVTYPE=BND;MATEID=r_189_0 TR:VR 124:10 50:0 chr18 74766936 r_217 G . Too_low_VAF END=74912935;SVTYPE=DUP;SVLEN=145999 TR:VR 273:9 31:0 chr18 78832835 d_1075 C . Too_low_VAF END=78832866;SVTYPE=DEL;SVLEN=-31;SVINSLEN=30;SVINSSEQ=CTGCCTGAGCTCCCTCCTTCCCTTCTCAGC TR:VR 222:4 23:0 chrUn_GL000216v2 173912 i_2018 A . Too_low_VAF END=173912;SVTYPE=INS;SVINSLEN=214;SVINSSEQ=TGTCATAAATCCCACTGTAGGCAAAGCCTAGACAACTTTTACATCACCTCAGTGATCAGTGGCAAGAGATATGTCCTCTAATGTCCCTCTATGCAGAGCATAGACAAGTGTCACATCTCCTGGGTGATCAGTGCAGAGATAAGTCACAATACCCCTATAGGTAGAGCTCTAGTGACCAGAGTTACATAACCCGGGTGATCCATGCAGAGTGAGT TR:VR 217:4 84:0 chr11 6885789 r_30 A . PASS END=6913108;SVTYPE=DUP;SVLEN=27319 TR:VR 102:8 44:0 chr13 110457109 d_363 C . PASS END=110457120;SVTYPE=INS;SVINSLEN=53;SVINSSEQ=GTGCGTCTGCGTGGGACCCCAGGCGTCCGTGGGGCTGATGCCGTGCATCTGCG TR:VR 37:3 13:0 chr13 68645143 r_119_0 A [chr6:72425843[T . PASS SVTYPE=BND;MATEID=r_119_1 TR:VR 78:15 59:0 chr6 72425843 r_119_1 T [chr13:68645143[T . PASS SVTYPE=BND;MATEID=r_119_0 TR:VR 78:15 59:0 chr18 2614564 i_824 G . Too_small_size END=2614564;SVTYPE=INS;SVINSLEN=40;SVINSSEQ=AAGGAAGGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAAAG TR:VR 73:7 18:0 chr2 157874235 r_255 A . PASS END=159253923;SVTYPE=DEL;SVLEN=-1379688 TR:VR 65:31 37:0 chr11 430720 i_233 G . PASS END=430722;SVTYPE=INS;SVINSLEN=160;SVINSSEQ=GGCTCCCGCGGGTGGTCTGGGGGCGTCCGCGGGGGTGTGTGGGGGCGTCCGCGGGTGATCTGGGGGCGTCTGCGGGGGTGTGGGGGCTCCCGCGGGTATCTGGGGGGGCGTCTGCGGGGGGTGTGGGGGCTCCGCGGGTATCTGGGGGCTTCTGCGGGGG TR:VR 52:4 20:0 chr13 68858511 r_120_0 T T]chr13:69135042] . PASS SVTYPE=BND;MATEID=r_120_1 TR:VR 73:9 45:0 chr13 69135042 r_120_1 T T]chr13:68858511] . PASS SVTYPE=BND;MATEID=r_120_0 TR:VR 73:9 45:0 chr18 27765541 r_199_0 C ]chr22:35057307]C . PASS SVTYPE=BND;MATEID=r_199_1 TR:VR 98:12 40:0 chr22 35057307 r_199_1 C C[chr18:27765541[ . PASS SVTYPE=BND;MATEID=r_199_0 TR:VR 98:12 40:0 chr18 75122791 r_218_0 A A]chr18:75167088] . PASS SVTYPE=BND;MATEID=r_218_1 TR:VR 219:11 34:0 chr18 75167088 r_218_1 T T]chr18:75122791] . PASS SVTYPE=BND;MATEID=r_218_0 TR:VR 219:11 34:0 chr3 42796022 r_299 T . PASS END=42827474;SVTYPE=DEL;SVLEN=-31452 TR:VR 52:13 36:0 chr7 100957690 i_1841 A . Too_low_VAF END=100957690;SVTYPE=INS;SVINSLEN=224;SVINSSEQ=GTACTCCCAGGTTCTGAATCCTCTGATCACCACCACTGAGACCACCTCACACAGTACTCCCAGCTTCATTTCTTGGATCACCACGCACTAGAGACCACTCACACAGTACTCCCAGCTTCAGTTCTTCGATTACCACCACCGAGACCACCTCACACAGTACTCCCAGCTTCACTTCTTCAATCACCACCACCGACTCTGATCACCACCGAGACCACCTCACTACA TR:VR 174:3 68:1 chr7 61817375 i_1831 G . PASS END=61817375;SVTYPE=INS;SVINSLEN=174;SVINSSEQ=TTTCTGTCCATTCTGTGAATGAACATTTGGGAGCTCATGGAGGCCAATAGCAAAAAAGCGAATAACCCTGGATAAAAACAAGAAGGAAGAATATCATAGAAAAGGCATTGTGATGTGTGCCTTCATTTTGCAGAGATAAACCTTTCTTTTCATTCAGCATTTTTAAAACCCTAT TR:VR 40:9 8:0 chr13 69088259 r_121_0 T [chr6:77548115[CTTTGAAAAAGAATATAATGAAGGAGA . PASS SVTYPE=BND;MATEID=r_121_1;SVINSLEN=26;SVINSSEQ=CTTTGAAAAAGAATATAATGAAGGAG TR:VR 88:8 32:0 chr6 77548115 r_121_1 A [chr13:69088259[CTCCTTCATTATATTCTTTTTCAAAGA . PASS SVTYPE=BND;MATEID=r_121_0;SVINSLEN=26;SVINSSEQ=CTCCTTCATTATATTCTTTTTCAAAG TR:VR 88:8 32:0 chr14_GL000225v1_random 52965 r_140_0 C CATCAGATGTCTATTTGTT]chr18:12915685] . Too_low_VAF SVTYPE=BND;MATEID=r_140_1;SVINSLEN=18;SVINSSEQ=ATCAGATGTCTATTTGTT TR:VR 536:3 489:0 chr18 12915685 r_140_1 A AAACAAATAGACATCTGAT]chr14_GL000225v1_random:52965] . Too_low_VAF SVTYPE=BND;MATEID=r_140_0;SVINSLEN=18;SVINSSEQ=AACAAATAGACATCTGAT TR:VR 536:3 489:0 chr16 4392237 r_165_0 C [chr4:68298683[C . PASS SVTYPE=BND;MATEID=r_165_1 TR:VR 66:12 45:0 chr4 68298683 r_165_1 C [chr16:4392237[C . PASS SVTYPE=BND;MATEID=r_165_0 TR:VR 66:12 45:0 chr22 12381138 i_1431 C . Too_low_VAF END=12381139;SVTYPE=INS;SVINSLEN=210;SVINSSEQ=ATTCAACTCACAGAGTTGAACTTATCTTTTGATTGAGCTGTTTTGAATATCTCTTTTGCCTATCTTATCATTGAGCACTTTTCAAACACTCTTTTTGTACAATCTGCTAAAGGATATATGGAGTGCTTTGAAGCCTGTTATGGAAAAGGAAATATCTTCACGTAATAACTACACAGAAACATACTGAGAAATTTCTTGGGATATGTGCAT TR:VR 84:3 41:0 chr6 170495486 i_1794 A . PASS END=170495486;SVTYPE=INS;SVINSLEN=164;SVINSSEQ=GAGGAGGATGGGGTTGGAGGAACTACAGAGCGGTGGTAAAAATGAGGATGGGGTTGGAGGAACTACAGAGCGGTGGTGAAAAGGAGGATGGGGTTGGAGGAACTACAGAGCGGTGGTGAAGAGGAGGATGGGGTTGGAGGAACTACAGAGGGGTCGTGAAAAGG TR:VR 40:3 19:0 chrUn_KI270757v1 69905 d_2229 G . Too_low_VAF END=69993;SVTYPE=INS;SVINSLEN=259;SVINSSEQ=CTTCTGTTCTTTTTTTATGTTAATATATTTCCTTTTACACCACAGGCCACAAAGGGTTCCAAATAGCCACTTGCAGATTCTGCAAAATGAGAGTTTCAATACTGCTCTGTCAAAAGATAGGTTCAACTACGTGAATTGAATGCACACATCACAAAGAAGTTTCTCAGAATGCTTCTGTGTAATTTTTATGTGAAGATGTTTCATTTTCCACCATGGGCCTCAATGCACTCCAAATTTCCACTTGCAGATTCTTCAAAAA TR:VR 387:10 142:1 chr18 29172474 r_200_0 T T[chr22:18922080[ . PASS SVTYPE=BND;MATEID=r_200_1 TR:VR 90:6 44:0 chr22 18922080 r_200_1 G ]chr18:29172474]G . PASS SVTYPE=BND;MATEID=r_200_0 TR:VR 90:6 44:0 chr21 7932495 d_1450 C . Too_low_VAF END=7932564;SVTYPE=DEL;SVLEN=-69 TR:VR 381:6 107:0 chr5 90910214 r_326 C . PASS END=90988288;SVTYPE=DEL;SVLEN=-78074 TR:VR 123:19 44:0 chr6 170496881 i_1795 G . PASS END=170496881;SVTYPE=INS;SVINSLEN=301;SVINSSEQ=GGGTTGGAGGAACTACAGAGCGGTGGTGAAAAGGAGGATGGGGTTGGAGGAACTACAGAGCGGTGGTGAAGAGGAGGACGGGTTGGAGGAACTACAAAGAGCGGTGGTGAAAAGGAGGACGGGGTTGGAGGAACTACAGAGCGGTGGTGAAGAGGAGGATGGGGTTGGAGGAACTACAGAGCGGTGGTGAAGATGAGGATGGGGTTGGAGGAACTACAGAGCGGTGGTGAAGAGGAGGACAGGGTTGGAGGAACTACAGAAGCGGTGGTGAAAGAGGAGGACGGGGTTGGAGGGCTTACAG TR:VR 40:9 17:0 chr8 140622606 d_2044 C . Too_low_VAF END=140622832;SVTYPE=DEL;SVLEN=-226;SVINSLEN=195;SVINSSEQ=GGGGGAATAATGCACATGGGGTCTCCTCTCGGGGGAATAATGCACATGGGGTCTCCTCTCGGGGGAATAATGCACATGGGGTCTCCTCTCGGGGGAATAATCCACATGGGGTCTCCTCTCGGGGGAATAATCCACATGGGGTCTCCTCTCGGGGAATAATCCACATGGGGTCTCCTCTCGGGGGAATAATGCACA TR:VR 68:3 15:0 chr13 71128327 r_122_0 T TG[chrX:65898127[ . PASS SVTYPE=BND;MATEID=r_122_1;SVINSLEN=1;SVINSSEQ=G TR:VR 61:11 39:0 chrX 65898127 r_122_1 G ]chr13:71128327]CG . PASS SVTYPE=BND;MATEID=r_122_0;SVINSLEN=1;SVINSSEQ=C TR:VR 61:11 39:0 chr17 1065610 i_704 A . PASS END=1065610;SVTYPE=INS;SVINSLEN=217;SVINSSEQ=CTGCTGTTACGTGAACTGAGGGCTATGCATGTTCCTCCAGACACTGTTGGTATGTGAACTGAGGGCTATGCATGTTCCTCTAGACACTGTTGTTATGTGAACTGAGGGCTATGCATGTCTCTTCCAGGCACACTGTTATGTGAACTGAGGGCTATGCATGTTCCTCTAGAGAAGACACTGTTGTTATGTGAACTGAGGGCTATGCATGTTCCTCTAG TR:VR 59:13 14:0 chr18 29354787 r_201_0 T [chrUn_GL000218v1:7001[A . Too_low_VAF SVTYPE=BND;MATEID=r_201_1 TR:VR 132:6 63:0 chrUn_GL000218v1 7001 r_201_1 A [chr18:29354787[A . Too_low_VAF SVTYPE=BND;MATEID=r_201_0 TR:VR 132:6 63:0 chr18 76393136 d_1054 G . PASS END=76393256;SVTYPE=DEL;SVLEN=-120 TR:VR 85:5 22:0 chr2 167972876 i_1182 T . PASS END=167972876;SVTYPE=INS;SVINSLEN=210;SVINSSEQ=GCATTGTGTTATCTGACATTTTTGACTTTGGGAGTATCAGAGATTGATCTGCATTATGAGAGGGCTTTAGTGTGCAGTAACAAGGTAGGAAATATACTTTTAGAGATGGGCCAATTCCAAAATGAGCTGATTGGCTTTGGGTTGCCATGCAATAAAATGCCCAGTAAAAGCGTTGCACTGTCTTCTCCCATAGCATCTCTTTCTTTTGGG TR:VR 43:3 13:0 chr20 28728979 r_261_0 C ]chrY:10933050]ACTGCACTCCAAAC . Too_low_VAF SVTYPE=BND;MATEID=r_261_1;SVINSLEN=13;SVINSSEQ=ACTGCACTCCAAA TR:VR 304:5 110:1 chrY 10933050 r_261_1 C CTTTGGAGTGCAGT[chr20:28728979[ . Too_low_VAF SVTYPE=BND;MATEID=r_261_0;SVINSLEN=13;SVINSSEQ=TTTGGAGTGCAGT TR:VR 304:5 110:1 chr13 71128336 r_123_0 T ]chrX:65898043]C . PASS SVTYPE=BND;MATEID=r_123_1 TR:VR 61:27 39:0 chrX 65898043 r_123_1 C C[chr13:71128336[ . PASS SVTYPE=BND;MATEID=r_123_0 TR:VR 61:27 39:0 chr18 29569551 r_202_0 T T[chr22:24043131[ . PASS SVTYPE=BND;MATEID=r_202_1 TR:VR 93:8 35:0 chr22 24043131 r_202_1 A ]chr18:29569551]A . PASS SVTYPE=BND;MATEID=r_202_0 TR:VR 93:8 35:0 chr20 46789480 i_1256 T . PASS END=46789481;SVTYPE=INS;SVINSLEN=1241;SVINSSEQ=TGGATGTGAGTGTGTGTGGGTGTGTGCAGGTGTGTGTTTATTGGATGTGAGCGTGTGGGTGTGCAGGTGTGTGTTTATTGGATGTGAGTGTGTGGGTGTGCAGGTGTGTGTTTATTGGCTGTGAGCGTGTGGGTGTGCAGGTGTGTGTTTATTGGATGTGAGCGTGTGGGTGTGCAGGTGTGTGTTTATTGGATGTGAGCGTGTGGGTGTGCAGGTGTGTGTTTATTGGATGTGTGTGTGTTTACATGTGTGTGTGGATGTGTGCGGGTGTGTGTTTATTGTTGATGTGAGTGTGTGGGTGTGCAGGTGTGTGTTTATTGGCAATGTGAGCGTGTGGGTGTGTATGACAGATGTGAGTGTGTGTGTGGGTGTGCAGGTGTGTTTATTGGATGTATGGGTGCAGGTGTGTGTTTATTTATTGTGAGTATGTGTGGGTGTGCAGGTGTGTGTTTATTGATGTATGTGTAGATGTGTGTGTGTGTTTTATTGGTTGTGAGCGTGTGGGTGTGTGCAGGTGTGTTTATTGGCGTGGGCGTGTGGGTGTGCATATGTGTTTGCCACGTATGTGGGTGCAGGTGTGTGTTTATTGGATGTGGGCGTGTGGGTGTGCACGTGTGTGTTTATGGGATGGGTGTGTGGGTGTGCACGTGTGTGCCTATAGATGTGTGGGTGTGCAGGTGTGTACACACAGACACATAGGGTGCAGGTGTGTGTTTATTGGCCGTGAGCGTGTGGGTGTGCAGGTGTGTGTTTATTGGATGGGTGGTGGGTGTGTGTGTGTGTGTTTATTGGATGTGGTGTGTGGGTGTGTAGGTGTGTACATACGAGTGTGGGTGTGTAGGTGTGCCTATTGGATGTGTGGGTGTGTAGGTGTGTGCCTATTGGATGAGTGTGTGTGTGTGGTGTGTGTTTATTGGTTGTGTGTGTGTGTGCAGGTGTGTGTTTATTGGATGAGTGTGTGGGTGTGTATGTGTTTATTGGCTGTGAGCGGTGTGGGTGCAGGTGTGTGTTTATTGATGGAGTGTGGGTGTGTTATGTGTGTTTATTGATGTGTGTGGCGGTGGTGGTGTGTGTTTATTGGATGTGTGGGTGTGTAGGTGTGTGTTTACTACGTACTGTGGGTGTGCAGGTGTGTACTTATTGGATGTGGGTGTGGTGGTGCAGGTGTGTGTTTATTGGATGGGCGTGTGGGTGTGGGTGTGTGTTTAGATGGATGTATGGGTGGGTGTATGTGTGTTTAT TR:VR 52:8 26:0 chr1 36407524 r_4_0 G GA]chr19:49923608] . PASS SVTYPE=BND;MATEID=r_4_1;SVINSLEN=1;SVINSSEQ=A TR:VR 107:19 44:0 chr19 49923608 r_4_1 C CT]chr1:36407524] . PASS SVTYPE=BND;MATEID=r_4_0;SVINSLEN=1;SVINSSEQ=T TR:VR 107:19 44:0 chr11 70812831 r_67_0 G [chr11:99456524[C . PASS SVTYPE=BND;MATEID=r_67_1 TR:VR 91:7 29:0 chr11 99456524 r_67_1 C [chr11:70812831[C . PASS SVTYPE=BND;MATEID=r_67_0 TR:VR 91:7 29:0 chr22 10704739 d_1509 T . Too_low_VAF END=10704843;SVTYPE=DEL;SVLEN=-104;SVINSLEN=2;SVINSSEQ=GA TR:VR 232:5 92:1 chr1 36407538 r_5_0 C [chr19:49923609[A . PASS SVTYPE=BND;MATEID=r_5_1 TR:VR 106:48 44:0 chr19 49923609 r_5_1 A [chr1:36407538[A . PASS SVTYPE=BND;MATEID=r_5_0 TR:VR 106:48 44:0 chr11 70833875 r_68 A . Too_low_VAF END=77336532;SVTYPE=DEL;SVLEN=-6502657 TR:VR 112:5 42:0 chr13 87440656 r_124_0 C CATATATCTTAAAATATAATTGTAATAATAAAAAAAACTACACAGAAGCATTCTGAGAAACATCTCTGTGATGTGTGCATTCATCTCACAGAGTTGAAATTTTCTTTTCATTGAGCAGTTTTGAAACACTCTTTTTGTAGGATCTGCAAGTGGATATTTGGAGTCCCTAGATGA[chr20:29839041[ . Too_low_VAF SVTYPE=BND;MATEID=r_124_1;SVINSLEN=173;SVINSSEQ=ATATATCTTAAAATATAATTGTAATAATAAAAAAAACTACACAGAAGCATTCTGAGAAACATCTCTGTGATGTGTGCATTCATCTCACAGAGTTGAAATTTTCTTTTCATTGAGCAGTTTTGAAACACTCTTTTTGTAGGATCTGCAAGTGGATATTTGGAGTCCCTAGATGA TR:VR 179:3 65:0 chr20 29839041 r_124_1 C ]chr13:87440656]TCATCTAGGGACTCCAAATATCCACTTGCAGATCCTACAAAAAGAGTGTTTCAAAACTGCTCAATGAAAAGAAAATTTCAACTCTGTGAGATGAATGCACACATCACAGAGATGTTTCTCAGAATGCTTCTGTGTAGTTTTTTTTATTATTACAATTATATTTTAAGATATATC . Too_low_VAF SVTYPE=BND;MATEID=r_124_0;SVINSLEN=173;SVINSSEQ=TCATCTAGGGACTCCAAATATCCACTTGCAGATCCTACAAAAAGAGTGTTTCAAAACTGCTCAATGAAAAGAAAATTTCAACTCTGTGAGATGAATGCACACATCACAGAGATGTTTCTCAGAATGCTTCTGTGTAGTTTTTTTTATTATTACAATTATATTTTAAGATATAT TR:VR 179:3 65:0 chr17 39986376 r_186 G . PASS END=40037779;SVTYPE=DUP;SVLEN=51403 TR:VR 85:10 28:0 chr18 78866420 d_1083 T . Too_low_VAF END=78866428;SVTYPE=INS;SVINSLEN=141;SVINSSEQ=GAGCAGCCGCGGACAAACTTGCAGACCTGGCTAGAGGAGGGTGGCAGCCATGAAAGCCCAGCCTGCAGTGCTGGCTAGAGAGGAGGGTGACAGCCGCGGACGGCCGAACCTGCAGTGCTGGCTAGGAGGAGGTGACAGCCG TR:VR 228:6 12:0 chr2 169467727 i_1184 T . Too_low_VAF END=169467728;SVTYPE=INS;SVINSLEN=422;SVINSSEQ=ATATAAATATATATTTACGTTTAATATATATTTATATATAAATAGATATTTACGTTTAATATATATTTATATATAAATATATATTTACGTTTAATATATATTTATATATAAATATATATTTACGTTTTAAATATATTTATATATAAATATATATTTACGTTTAAATATATTTATATATAAATATATATATTTACGTTTAAATATATTTATCTATAAATATATATTTACGTTTAATATATATTTATAGATAAATATATATTTAAGATTTATTATATATTTATAGATAAATATATATTTACGTTTAATATATATTTATCTATAAATATATATTTATGTATTTAATATATATTTATAGATAAATATATATATTACGTTTTATATATATTTATAGATAAATATATATTTACGTTTAATATATATTT TR:VR 137:3 86:0 chr4 49649107 i_1581 T . Too_low_VAF END=49649108;SVTYPE=INS;SVINSLEN=496;SVINSSEQ=TTAATGGAAACCAATGGAATGGAAAGGAAACAAACCGAGTGGAATGGAATGCAAGGGAATTTCAATGGAATGGAATGGAATGGAATGGAATGGAATGCCATTCAACGAATGGAAACAAACCGAGTGGAATGGAATGGAATGGAAAGGACTGGAATGTAATGGAATGGATTGGAATCAACCCGATCTCCAATGCAACGGAATTGAATTGAATGGAATGGAATGGAAGGGAATGGAATGGAATGGAAAGGAATGGAATCAAACTGGAATGCAATGGAATGGAATGGAATGGAATTTATTTGAAACGAATGGAATAGAATGGAATGGAATGGAATCAACCTGGAGTGGAGTGCAATGGAAAGGAATGGAAATGGAATGGAATGGAATGGAACGGAATCGAATGGAATGAACACGAGTGTGATGGAATGGAATGGAACGGAATAGAATGGAAAGGAATCGGACAGAATGGATTGGAATGGAATGGAATGGAACACGGCGG TR:VR 386:3 131:1 chr13 94796233 r_125_0 T T]chr13:95169054] . PASS SVTYPE=BND;MATEID=r_125_1 TR:VR 83:20 48:0 chr13 95169054 r_125_1 G G]chr13:94796233] . PASS SVTYPE=BND;MATEID=r_125_0 TR:VR 83:20 48:0 chrUn_GL000216v2 66122 i_2003 A . Too_low_VAF;Too_small_size END=66123;SVTYPE=INS;SVINSLEN=47;SVINSSEQ=TTAGAGTCCATTCCTTTCCATTCCGTTCTATTGCATTCAACTCCATT TR:VR 301:10 128:1 chr10 131917013 i_191 T . PASS END=131917013;SVTYPE=INS;SVINSLEN=209;SVINSSEQ=AGGGACCTCACATGGGTGGAATGACACAGTGTAGGGACCCCAGGCGGGTGGAATGACACAGTGTTTGTAGGGACTCACACGGGTGGAATGACACAGTGTTTGCAGGGACCTCACGTGGGTGGGAATGACACAGTGTAGGGACCTCAGGCGGGTGGAATGACACAGTGTTTGTAGGGACCTCACACGGGTGGAATGACACAGTGTTTGCA TR:VR 28:4 26:0 chr11 48912423 i_269 T . PASS END=48912423;SVTYPE=INS;SVINSLEN=171;SVINSSEQ=TTTTATGTGAAGGTATTCCTGTTTCCATCAAAGGCCTCAAAGCCGTCCAAATATTCAAATGCAGATTCTGCAAAAACAGTTTTTCAAAACTACTCTATCAAAAGGAAGATTCAAATATGTGAGTTGAATGTCATCATCATAAAGAAATTTTGGAGAATGCTTCTGTCTAGT TR:VR 66:7 20:0 chr13 94796235 r_126_0 A [chr13:95169054[G . PASS SVTYPE=BND;MATEID=r_126_1 TR:VR 83:8 48:0 chr13 95169054 r_126_1 G [chr13:94796235[G . PASS SVTYPE=BND;MATEID=r_126_0 TR:VR 83:8 48:0 chr14_GL000194v1_random 110061 r_134_0 A A[chrUn_GL000218v1:21106[ . Too_low_VAF SVTYPE=BND;MATEID=r_134_1 TR:VR 283:4 118:0 chrUn_GL000218v1 21106 r_134_1 A ]chr14_GL000194v1_random:110061]A . Too_low_VAF SVTYPE=BND;MATEID=r_134_0 TR:VR 283:4 118:0 chr18 76585916 i_859 C . Too_low_VAF END=76585916;SVTYPE=INS;SVINSLEN=72;SVINSSEQ=TTCCTCCCTCCCTTCCTTCTTTCTTTCTTTCTTTCTCTCTCTCTCTCTCCCTTCCTCCTTCCCTCCCTTCTT TR:VR 122:4 16:0 chr5 91592874 d_1852 T . PASS END=91592943;SVTYPE=DEL;SVLEN=-69;SVINSLEN=1;SVINSSEQ=A TR:VR 60:5 13:0 chr7 101984872 r_359 T . PASS END=134558409;SVTYPE=DEL;SVLEN=-32573537 TR:VR 124:8 35:0 chr9 27591427 i_1983 C . PASS END=27591457;SVTYPE=INS;SVINSLEN=188;SVINSSEQ=ACTGGATGCTGAGATGCAAAAATCTATACACAAGATCAATGAAACCAAGTATTGGTTCTTCAAAAGAATAAATAAGACAGACCACCCTAGCTATATTAACAAAGAAAAAAAGGAGATCCAAATAAGTCCAATGAGAAATGACAATGATGATATTATAACTAATCCTACAGAAATCAAAAACTGCATGT TR:VR 29:9 19:0 chrX 125962555 d_2249 T . PASS END=125962544;SVTYPE=INS;SVINSLEN=122;SVINSSEQ=TTAGCTAGACATAGAGTGCTGATTGGTGTGTTTTTACAGAGTGCTGATTGGTGCGTTTACAAACTTTTAGCTAGACCACAGGGTGTTGATTGGTGTGTTTTTACAGAGTGCTGATTGGTGCG TR:VR 27:4 24:0 chr11 48913775 i_270 G . PASS END=48913775;SVTYPE=INS;SVINSLEN=342;SVINSSEQ=TTTCTGTCCAGTTTGTATGTGAAGATATTCCCATTTCAACAGTAGGCCTCAAAGTGCTCCAAATATCCACTTGCAGATTGTACAAAAAGAGTGTTTCAAAAATACTCAATCAAAAGGAAAGTTCAACTCTGTGAGTTGAAAGCACACATCACAAAGAAGTTTCTGAGAATGCTTCTGTCTAGTTTTTATGTGAAGATATTTCCTTTCTACCATAGGCCTCAAAGCCCTCCAAACATCCACTTGAAGATTCTACAAAAGGAGTGTTTTAAAACTGCTCTAACAAAAGGAAGGTTCAAATCTGTGAGTTGAATGCACACATTACAAAGTTGTTTCTGAGAATTC TR:VR 66:5 19:0 chr18 38286579 d_1036 T . PASS END=38286752;SVTYPE=DEL;SVLEN=-173 TR:VR 43:17 24:0 chr18 78916954 i_904 T . Too_low_VAF END=78916954;SVTYPE=INS;SVINSLEN=265;SVINSSEQ=GACTGTTGGATGGAATGGACAGATGACTGATGGATGGAATGGACAGATGACTGATGGATGGAATGGACAGATGACTGATGGATGGAATGGACAGATGACTGATGGATGGAATGGACAGATGACTGATGGATGGAATGGACAGATGGACGGATGGATGGAATGGACAGATGACTGATGGATGGAATGGACAGATGACTGATGGATGGAATGGACAGATGACTGATGGATGAATGGATAGATGACAGATGGATGGAATGGACAGACG TR:VR 232:8 20:0 chr2 38010854 r_244_0 A AATCTC]chr20:29386058] . Too_low_VAF SVTYPE=BND;MATEID=r_244_1;SVINSLEN=5;SVINSSEQ=ATCTC TR:VR 137:6 58:1 chr20 29386058 r_244_1 A AGAGAT]chr2:38010854] . Too_low_VAF SVTYPE=BND;MATEID=r_244_0;SVINSLEN=5;SVINSSEQ=GAGAT TR:VR 137:6 58:1 chr21 7939487 i_1317 A . Too_low_VAF END=7939487;SVTYPE=INS;SVINSLEN=120;SVINSSEQ=TTCAATTCCCTTCAATACTATTGCATTACATTCTATTGTATTCTATTCGAATAAATTCCATTCGAGACAGTTCCTTTCGTGTTCGTTCTATTTGAGTCCATTCCATTTGAGTACATTACA TR:VR 478:5 139:1 chr1 38933862 r_6 G . PASS END=38953055;SVTYPE=DUP;SVLEN=19193 TR:VR 144:12 34:0 chr14_GL000194v1_random 35875 r_133 A . Too_low_VAF END=110064;SVTYPE=DUP;SVLEN=74189 TR:VR 146:6 66:0 chr15 99926509 d_825 A . Too_low_VAF END=99927257;SVTYPE=DEL;SVLEN=-748;SVINSLEN=11;SVINSSEQ=GTGAGGAGGGC TR:VR 71:3 17:0 chr18 41245992 r_204_0 C [chr18:41246234[T . PASS SVTYPE=BND;MATEID=r_204_1 TR:VR 70:23 15:0 chr18 41246234 r_204_1 T [chr18:41245992[T . PASS SVTYPE=BND;MATEID=r_204_0 TR:VR 70:23 15:0 chr18 76611941 i_861 G . PASS END=76611941;SVTYPE=INS;SVINSLEN=100;SVINSSEQ=GCGATGTGCCTGCGTGTGTGCGTGTGTGCGTGTCTGCCTGCGTGTGTGCCTGCGGTGGAGGGGCGATGTGCCTGCGTGTGTACCTGCGTGTGTGTGTGTG TR:VR 119:7 14:0 chr3 88973182 r_300_0 G ]chrX:121267978]A . Too_low_VAF SVTYPE=BND;MATEID=r_300_1 TR:VR 67:3 42:1 chrX 121267978 r_300_1 A A[chr3:88973182[ . Too_low_VAF SVTYPE=BND;MATEID=r_300_0 TR:VR 67:3 42:1 chr7 102960051 r_360 T . PASS END=105679407;SVTYPE=DEL;SVLEN=-2719356;SVINSLEN=3;SVINSSEQ=CTG TR:VR 108:11 47:0 chrY 11329101 d_2314 A . Too_low_VAF END=11329370;SVTYPE=INS;SVINSLEN=348;SVINSSEQ=TCAGTGCAGAGATACATCGCAATGTCCCTGTAGGCGGGGCCTTGACAAGTGGTATATCACCTGGGTGATCATTGCAGGGATATGTCAGCAAAGCACCGTATGCAGGCAGATCCCCTGAAAAGTGTTACATCACCTGGGTGATCAGTGCAGAAATGTGTCACAATGCCACTGTGTGGCAGAGCCTAGACAAAGAGTCCCATCACCTGGGTGATCAGTGCAGAGTTGTGTCACAATGCCCCTGTAGGCAGAGCCTAGACAAGTTTGGTATATCACCTGGGAGATCATTGCTGGGATATGTCTGAAAGCACCCTGTCTGGCAGATCCTAGAGAAGAGTTATATCACCTGAG TR:VR 654:3 324:0 chr11 74500243 r_70_0 C [chr11:95575804[A . PASS SVTYPE=BND;MATEID=r_70_1 TR:VR 107:12 41:0 chr11 95575804 r_70_1 A [chr11:74500243[A . PASS SVTYPE=BND;MATEID=r_70_0 TR:VR 107:12 41:0 chr18 41246214 r_205_0 A A[chr22:22123507[ . PASS SVTYPE=BND;MATEID=r_205_1 TR:VR 140:23 31:0 chr22 22123507 r_205_1 T ]chr18:41246214]T . PASS SVTYPE=BND;MATEID=r_205_0 TR:VR 140:23 31:0 chr3 89851359 d_1648 A . PASS END=89851905;SVTYPE=DEL;SVLEN=-546 TR:VR 32:20 25:0 chr5 94124450 r_327 G . PASS END=94214839;SVTYPE=DEL;SVLEN=-90389;SVINSLEN=6;SVINSSEQ=TAAAAA TR:VR 101:11 34:0 chr7 103372806 r_361 G . PASS END=104596343;SVTYPE=DUP;SVLEN=1223537;SVINSLEN=44;SVINSSEQ=ATATGTGTCATTATATAACAACAAAATAATAATAATAATTATAT TR:VR 99:9 53:0 chr9 41230211 d_2065 G . Too_low_VAF;Too_small_size END=41230223;SVTYPE=DEL;SVLEN=-12;SVINSLEN=1;SVINSSEQ=C TR:VR 149:3 61:1 chr10 38745885 d_192 G . PASS END=38746306;SVTYPE=DEL;SVLEN=-421;SVINSLEN=172;SVINSSEQ=AAATGTTGAAATGAAAGGAGGAAATGATGAGATGAGGAGATGAAATGATGAGATGAAATGAATTGAGATGAAATGAGATGAAAAATGATATGAAAAAGGATGAGATGAAATGAAATGAGATGATATGAAGTGACATAATGAAATAAATGAAATGAGATCAAATGAAATGAAA TR:VR 80:5 24:0 chr18 41489754 r_206_0 A A]chr22:24022369] . PASS SVTYPE=BND;MATEID=r_206_1 TR:VR 142:39 35:0 chr22 24022369 r_206_1 A A]chr18:41489754] . PASS SVTYPE=BND;MATEID=r_206_0 TR:VR 142:39 35:0 chr22 12691857 i_1436 T . Too_low_VAF END=12691857;SVTYPE=INS;SVINSLEN=68;SVINSSEQ=ATCTGAATTGATCAACAAGTGACAGAAACTCTTGTCTAGGCTGTGCCTACAGGTTCTTGGTGACACAT TR:VR 126:5 43:0 chr4 49652224 i_1585 T . Too_low_VAF END=49652224;SVTYPE=INS;SVINSLEN=209;SVINSSEQ=GGAATAACATGCAATCAACTTTGGTGGAATGGTATGGAATGGAATTTAATGGAATGGAATGGAATGGAAATCAATCAAACCGAGTGGAATGTAATGTAATGGAATGGAATGGAATGGAATGGATTGGAAACAATGCAATGCAATGGTATCAACCAGAATGGAATGCATGGAATGGAATGGAATGGAATGGAATCACCCTGAGTGGAAAG TR:VR 308:12 104:1 chr9 41230256 d_2066 G . Too_low_VAF;Too_small_size END=41230286;SVTYPE=DEL;SVLEN=-30 TR:VR 148:3 58:1 chrUn_KI270442v1 162134 i_2064 G . Too_low_VAF END=162134;SVTYPE=INS;SVINSLEN=1706;SVINSSEQ=TGTAGGTTTTATGTGAAGATATTTCCTTTTCCACCATTGGCTCTCAAAGCACTCAAAATATCCACTTGCAGATTCTACTAAAAGAGTGTGTCAAAACTGCTCAATCAAAAGTAAAGGTTCAACTCTGTGAGAAGAATGCACACATCACAAAGATGTTGGTCAGAATGCGTCTGCCTAGTTTTTATGTGAAGATATTTCCTTTTCCATCATAGGCCTCAAAGAGCTCCAAATGTCCACTTACAGATTGTACATAAAGAGTGTTTCAAAGCTGCTCAATCAAAAGAAAGGTTCTATTCTGTGAGATGAATGCAGACTTCACACAGAAGATTGTCAGAATGATTCTGTCTACTTTTTATATGACGATATTTCCTTTTCCACGATTGGACTCAAAGCGCTCAAAATGTCCACTTGCAGATTCTACAAAAAGAGTGTTTCAAAGCTGCTCAGTCAGAAGAAAGTTCAACTGTGTTAGATGAATGCACACATCACAAAGTAGTTTGTCAGAATGCTTCTGTCTAGTGTTTATGTGAAGATATTTCCTTTTCCAATATAGGCCTCAAAGGGCTCCAAAAGTCCACTTGCAGATTCTAGAAAAAGAGTGTTTAAAAACTGCTCAATGAAAGTAAGTTTCTACTCTGTGAGATGAATGCACACATCACAATGTTTTTTGTCAGAATGCTGCCGTCTAGTTTTTATGTGAAGATGTTTCTTTTTCAACCATAGACCTCAAAGCGCACCGAATATCCACTTACAGATGCTACAAAAAGAGTGTTTCAAAGCTGCTCAATCAAAAGAAAGGTTCAACTCTGTGAGATGAATGCACACATAACAAAGAAGTTTGTCAGTGCTTCTGTCAGGTTTTTTGTGAAGATATTTCGCTTTCCAGCATTGGCCGCAAATCGCTCCAAATGTCCATTTGCAGATTCTACAAAAAGAGTGTTTCAAAGCTGCTCAATGAAAAGCAAGGTTCAAATCTGTGAGGTGAATGCCCACATCACAAAGAAGTTTGTCAGAAGGCTTCTGTCTAGTTTTTAAGTGAAGATACTTCCTTTTCCAACTTTGGTCCCCAAAGTGCTGCAAATGTCCACTTGCAGATTCTACAAAAAGAGTGTTTCAAAGCTGCTCAATGAAAAGAAAGATTCAACTCTGTGAGATGAATGCACACATCACAAAGAAGTTTGTCAGAATGTGTATGTCTAGTTTTTATTTGATGATATGTCCTTTTCCACAATAGGCTACAAATCGCTCCAAATGTCCACTTGCAGATTCAACAAAAAGAATGTTTCAAAGCTGTTCAATGAAAAGAAATGTTCAACTTTGTGAGCTGAATGCACACATCACAAAGAAGTTTGTCAGAAAGCTTCTGTCTAGTTTTTATGTGAAGATATTTCCTTTTCCACAATGGGCCTCAAAGTGCTCCACATGTCCACTTGCAGATTCTACAAAAAGAGTGTTTCAAAGCTGCTCATTCCAAAGAAAGGTTCAACTCTGTGTGAGATGAATGCACACATCACAAAGAAGTTTCTCATAATGCTTCCGTCTAGATTTTATTATATGAAGATATTTCGTTGTCCACCCATAGGCCTCAAAGCTCTCCAATGTCCACTTGGAAATTCTACAAAAAGAGTGTTTCAAAACTGCTCCATGAAAGTAAGGTTCAACTGCTTTGAGGTGAATGCACACATCACAGAAAACTTTTTCACAGA TR:VR 188:9 69:1 chr11 76619340 r_71_0 G GGAGGTGGGGGGGTCAGCCCCCCACCT[chr12:8184240[ . PASS SVTYPE=BND;MATEID=r_71_1;SVINSLEN=26;SVINSSEQ=GAGGTGGGGGGGTCAGCCCCCCACCT TR:VR 77:4 38:0 chr12 8184240 r_71_1 G ]chr11:76619340]AGGTGGGGGGCTGACCCCCCCACCTCG . PASS SVTYPE=BND;MATEID=r_71_0;SVINSLEN=26;SVINSSEQ=AGGTGGGGGGCTGACCCCCCCACCTC TR:VR 77:4 38:0 chr18 4510684 i_826 C . PASS END=4510684;SVTYPE=INS;SVINSLEN=433;SVINSSEQ=GTGGCGGCGCGGCGGCGGCGCGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGCGGCGGCGGGCAAGGGCGCGCGTGCGCGGCGGCGGCGGCGGCGGCGGCGGGCGGCGGCGGCGCGCGGCACATAAACGGCACACACACAGTGCATATGTATACATACATATGTATATATGGTGGTATATATGGTATACACACACAGTGTATGTATATACATACATATGTATATGGTATATATACATATGGTGTATATATACATATATGTATACATGTACATACATATACATACATGGTGTATATGGTGGTGGTGGGTGGTGGCGGTGGTGGTGGCGGTGTGTGTGTGTGTGGTGGTGTGTGTGGTGGTGGTGGTGTGTGTGGTGTGTGGTGGTGTGTGGTGGTGTGTGGTGTGTGTGGTGGTGTGTGGTGGTGTGTG TR:VR 110:6 25:0 chr7 105688051 r_363 C . PASS END=116788738;SVTYPE=DUP;SVLEN=11100687;SVINSLEN=37;SVINSSEQ=ATCCTCATCCTTTGAGGCCCAGCTCACCCAGGAAGCT TR:VR 139:14 29:0 chr14_GL000225v1_random 112603 d_719 G . Too_low_VAF;Too_small_size END=112591;SVTYPE=INS;SVINSLEN=56;SVINSSEQ=TGTCCCATCACCTGGGTGATCAGTGCAGAGTTATGTCACAATGCCCCCTTAGGCAG TR:VR 409:3 227:0 chr15 17035091 d_793 T . Too_low_VAF END=17035505;SVTYPE=DEL;SVLEN=-414;SVINSLEN=72;SVINSSEQ=TGAGGCCTATTGTGGAAAAGGAAATATCTTCATATAAAAACTACACAGAAGCACTCCGAGAAACTTGTCTGT TR:VR 92:3 27:0 chr2 90288898 d_1227 C . PASS END=90289215;SVTYPE=DEL;SVLEN=-317 TR:VR 84:5 39:1 chr3 90477759 i_1510 A . PASS END=90477759;SVTYPE=INS;SVINSLEN=515;SVINSSEQ=TCCACTTGCAGATCCTATGGAGACAGTTTTTCAAAACTGCTCAATGAAAAGGTATGTTCAACTCTGTGAGTTGAATTCAAATATCACAAAGAAGCTTCTGAGAATGCTTCTCTCTAGTTTTTAAGTGAAGATATTTCCTTTACCACCATAGGCCTAAAACGATCTCCAAATGTCCACTTGCAGATACTACAAAAACAGTGTTTACAAACTGCTCCATCAGAAGAAATGTTTAAATCCGTGAATTGAATGCACACATCACAAAGTAGTTTCTGAGAATGCTTCTGTCTAGTTTTTATGTGAAGATATTCCCATTTCCAACGAAGGCCTAACAGCAGTCCAGATATCCACTAGCAGATTCTATGAAAAAAGTGTCTCATAACTGCTCTATGAAAAGGTATCTTCAACTTTGTGAGTTGAATGCAAACATCATAAAGAAGTTTCTGAGAATGCTTCGGTCTAGTTTTTATGTGAAGATATTTCCTTTTCCACCATAGGCCTCAAAGCTCTCCAAAGGT TR:VR 51:9 24:0 chr4 49656125 d_1731 T . Too_low_VAF;Too_small_size END=49656150;SVTYPE=DEL;SVLEN=-25 TR:VR 204:5 50:0 chr18 8191753 r_194_0 C ]chr22:21673626]T . PASS SVTYPE=BND;MATEID=r_194_1 TR:VR 131:14 26:0 chr22 21673626 r_194_1 T T[chr18:8191753[ . PASS SVTYPE=BND;MATEID=r_194_0 TR:VR 131:14 26:0 chr7 110489905 r_364 G . PASS END=131068352;SVTYPE=DEL;SVLEN=-20578447;SVINSLEN=19;SVINSSEQ=CTAAATATATTTATATATT TR:VR 114:20 31:0 chr7 76498887 i_1838 G . PASS END=76498887;SVTYPE=INS;SVINSLEN=1745;SVINSSEQ=AGTGTGTGTGGAGGTGTGTGGAGTGTGTGGGGTGTATGGAGGTGGGTGTGTGGGGTGTATGGAGGTGTGAGGTGTGTGGAGGGGTGAGGTGTGTGTAGGGTGTGTGTGGGGTGTGTGGGGTGTGTGAGGTGTGGGGGTGTGAGGTGTGTGGGAGGTGGGTATGTGGAGCTGTGTGTGGTGTGTGGAGGTGTGGGGTGTGTGGAGCTGTGTGGGGTGTATGGAGGTGTAGGGTGTGAGGGAGGTGTGGGGTATGTGGAGGTGTGGGGTGTGTGGAGGTGTGGGATGTGTGGGGTGTGTGGAGGTGGGTGTGTGGAGCTGTGTGGGGGGTATGGAGGTGTAGGGTGTGAGGAGGTGTGGGGTGTGTGAAGGTGTGGGGTATGTGGAGGTGTGGGGTGTGTGGAGTGTGTGGGATGTGTGGGGTGTGTGGGGTGTGGAGATGTGTGGTGTGTGGAGGTGTGAGGTGTGTGGTGTGTGGAGGTGTGGAGTGTGGGGTCTGTGAAGGTGTGAGGGGTGTGTGGAGGTGTGGGAGTTGTGTGGGGGTGTGTGGGGGGTGTGTGTGTGGAGGTTGGTGTGTGGAGGTGTGTGGTATGTGGAGGTGTGGGGGATGTGTGGGGGTGTAGAGGTGAGGGTGTGTGGGGTGTGGGATGTGTGGGGTGTGTGGGGTGTGGAGATGTGTGTGTGTGGGGTGTGGGAGGTGTGGAGGGGGTGTGGGGGTGGTGTGTAGACTGTGTAGAAGTGAGGTGTGGGGGGTGTGGGTGGAGTTGGGTGTGCGTGGGGGTGTGGGTGTGGATTGGGGTGTGTGGTGTGTATAGGTGTGGTGTCTTTAGGTGCGGGGGGTGTGGATTGGGGTGTGGTGTGTGTAGGTGTGTCTGTAGGTGTGGGGGGTGTGGGTGTTGGTGTGTGTGTGGAGGTGTGGGGTATGCGGGGATGTGTGGAGGTGGGGGTGTGGGTGTTGTGTGGGGTGTGTGTGGGGTGTGTGGAGGTGTGGGGTATGTGGGGATGTGTGGAGGTGTGGGGTTGTGGGTGGAGTTGTGTGGGGTGTGTGGGGGTGTGTGGAAGTGGGGGTGTAGGTGGAGTTGGGTGTGTGGGGGGGGGTGTGGGTGTGGATTGGGGTGTGTGGTGTGTGTGTAGGTGTGGTGTCTAGGTGTGGGGGCTGTGGGTGTGGATTGGGGTATGTGGTGTGTGTGTGTGGGTGTGGGGTGTGTTGTCTGTAGGTGTGGGGGGTGTGGGTGGAGTTGGGGGTGGGGGTGTGTGGGTGGAGTGTGTGGGGGGTGGTGTGTGTGGATTTGGGTGTGTGTGTGTGTAGGTGTGGTGTCTAGGTGGGGGTGTGGGTGGAGTTGGGTGTGTGTGTGGGGTGTGGGTGGAGTTTGTGTGTGGGGTGTGTGTGTAGGTGTGTCTAGGTGGTGGGGGTGTGGGTGGAGTTGGGTGTGTGTGGGGTTGTGGGTGTGGATTGGGGTGTGTGGTGTGTGTGTAGGTGTGGTGTCTAGGTGGGGGTGTGGGTGGAGTTGGGTGTGTGTGTGGGGGGTGTGGGTGGAGTTGTGTGTGTGTGGGGTGTGTGTGTAGGTGTGGTGTCTAGGGTGGGGGTGTGGGTGGAGTTGGGTGTGTGTGGGGTTGTGGGTGTGGATTGGGGTGTGTGGTGTGTGTGTAGGTGTGGTGTCTAGGTGTGGGGGGTGTGGGTGGGTGGAGTTGGGTGTGTGTGGGGGGGTGTGGGTGTGGATTGGGGTGTGTGTGTGTGTGTAGGTGTG TR:VR 32:4 13:0 chrUn_KI270538v1 75265 i_2076 A . Too_low_VAF END=75266;SVTYPE=INS;SVINSLEN=345;SVINSSEQ=TTTCATTTTCCACCATACTCCACAAATCGCTCCAAATATCCACTTGCAAATACTACAAAAAGACTGTTTCAAAACTTCTCTCTCAAAAGGAAGGTTCAACTCTGTGAGTTGAATGCACACATCACAAGGCAGTTTCTGAAAATGCTTCCGTCTAGTTTTTATTTGAAGGAATTTCCTTTTCCTTCTTCGGCCTCAAATCACTGCAAATATCCACTTGCAGATACTACAAAAAGACTGTTTCAAAACCGCTCTCTCAAAAGGAAGGTTCAACTGTGTGACTTGAATGCACACATCACAAAGCAGTTTTTGAGAATGCTTCTGTCTAGTTTGTATGTGAAGATATTC TR:VR 204:4 67:0 chr11 77335886 r_72_0 C C]chr11:96642988] . PASS SVTYPE=BND;MATEID=r_72_1 TR:VR 120:9 47:0 chr11 96642988 r_72_1 T T]chr11:77335886] . PASS SVTYPE=BND;MATEID=r_72_0 TR:VR 120:9 47:0 chr12 132325237 r_98_0 T T]chr6:40143525] . PASS SVTYPE=BND;MATEID=r_98_1 TR:VR 62:24 31:0 chr6 40143525 r_98_1 T T]chr12:132325237] . PASS SVTYPE=BND;MATEID=r_98_0 TR:VR 62:24 31:0 chr13 113371865 i_402 T . PASS END=113371865;SVTYPE=INS;SVINSLEN=1080;SVINSSEQ=CCTCCTGAGGCCCCTCTCCCTCCTCCTGAGGTCTCCCTCCTCCCTCCCTCCTGAGACCCCCTCCTCCTCCTGAGGCCCCCTCCCTCCTCCTACTGAGGTCTCCCTCTCCTCCTCCTGAGACCCCCTCCCTCCTCCTGAGACCCCCTCCCCCTCCTCCCTCCTCCTGAGGCCCCCTCCCTCCTCCTGAGACCCCTCCCTCCCTCCCTCCTCCTGAGACCCCTCCCTCCTCCGGAGACCCCCCTCCCTCCTCCTGAGGCCTGCCTCCCTCCTCCTGAGACCCCTCCCTCCTCCTGAGGCCCCTCCCTCCTCCTGAGGCCCCTCCCTCCTCCTGAGACCCCTCCCTCCTCCTGAGATCCCCTCCCTCCTCCTGAGACCCCTCCCTCCTCCTGAGAACCCCTCCTCCTCCTGAGACCCCCTCCCTCCTCCTGAGGCCCCCCTCCCTCCTCCTGAGACCCCTCCCTCCTCCTGAGACCCCTCCCTCCTCCTGAGACCCCCTCCCTCACCTCCTCCTGAGACCCCTCCCTCCTCCTGAGACCCCTCCCTCCTCCTGAGACCCCCCTCCCTCCTCCCGAGGTCTCCCTCCCCTCCTCCTGAGGTCTCCCCTCCCTCCTCCTGAGACCCCCTCCCTCCTCCTGAGGCCCCTCCCTCCTACTGAGGTCTCTCCTCCCTCCTCCTGAGACCCCTCTCCTCCCCTCCTCCTGAGGTCTCCACTCCCTCCTCCTGAGGCCCCTCCCTCCTCCTGAGGACCCCTCCCTCCTCCTGAGACCCCCTCCTCCTCCTGAGACCCCTCCCTCCTCCTCCTGGAGACCCCCTCCATCCTCCTGAGGCCCCTCCCTCCTCCTGAGGTCTCCCTCCTCCTCCTGAGACCCCTCCCTCCTCCTGAGGCCCCTCCTCCCTCCTGAGGCCCCCTCCCTCCTCCTGAGGCCCCTCTCCCTCCTCCTGAGGTCCCCTCCTCCTCCTCCTGAGACCCCCTCCCTCCTCCTGAGGCCCCCTCCCTCCTCCCTGAGGCCCCTCCTCCCTCCTGGAGGTCTCCCTCCTCCTCCTGAGGTCTCCCTCCCTCCTCCTGAGGCCCCCTCCTCC TR:VR 50:5 18:0 chr14 105520994 i_444 A . PASS END=105520994;SVTYPE=INS;SVINSLEN=547;SVINSSEQ=ATGCTACTGGCTCTGGGTGGGTGTGAAAGGGGGCATGATGCTACTGGCTCTGGGTGGGTGTGAAAGGGGGGCAGATGCTACTGGGTCTGGGTGGGTGTGAAAGGGGGCAGATGCTACTGGCTCTGGGTGGGTGTGAAAGGGGGCAGATGCTACTGGCTCTGGGTGGGTGTGAAAGGGGGGCAGATACTACTGGGTCTGGGTGGGTGTGAAAGGGGGGCGAATGCTACTGGCTCTGGGTGGGTGTGAAAGAGGGCGAATGCTACTGGCTCTGGGTGGGTGTGAAAGGGGGCGAATGCTACTGGCTCTGGGTGGGTGTGAAAGGGGGCGAATGCTACTGGCTCTGGGTGGGTGTGAAGGGGGCGAATGCTACTGGCTCTGGGTGGGTGTGAAAGGGGGCGAATGTACTGGCTCTGGGTGGGTGTGAAAGGGGGCGGATGCTACTGGCTCTGGGTGGGTGTGAAGGGGGCGAGAATGCTACTGGCTCTGGGTGGGTGTGAAAGGGGGCCAGATGCTACTGGGTTTCTGGGTGGGTGTGAAAGGGGGCAGA TR:VR 33:3 21:0 chr15 99928396 i_624 G . PASS END=99928396;SVTYPE=INS;SVINSLEN=161;SVINSSEQ=GGAGTGTGCGCGAGTGAGGAGGGCGGGGGAGTGCGCGAGTGAGGAGGGCGGGGGAGTGCGCGAGTGGAGTGAGAGGGCGGGGGAGTGCGCGAGTGAGGAGGGCGGGGGAGTGCGCGGTGGGGAGGGCGGGGTGCGCGAGTGAGAGGAGGAGGGCGGGGGAG TR:VR 70:5 18:0 chr19 36477177 r_230 A . PASS END=36646687;SVTYPE=DEL;SVLEN=-169510 TR:VR 51:12 45:0 chr2 90392952 i_1113 T . Too_low_VAF END=90392952;SVTYPE=INS;SVINSLEN=278;SVINSSEQ=GAAATCGAATGGAATCATCGAACGGGCTTGAGTGGAATCATCATGAATGGAATCGAATGGAATTACATCAAATGGATTGGAATGGAATCATAGTCAAATGGACTCGAATGGAATCATCATCAAATGGAATCGAATGGAATCATCTAATGGAATCGAATGGAATCATCAATGAATGGAATCGAATGGAATCATCATTGAATGGAATCGAATGGAATCATCATCAAATGGAATTGAATGGAATCACTCGAATGGAATGGACATCGAAATGGAATCCAACG TR:VR 588:4 349:1 chr21 45633408 i_1411 G . Too_low_VAF END=45633408;SVTYPE=INS;SVINSLEN=342;SVINSSEQ=CGCTTCCGGTCTCCGTGCTGGTGGGACTGAGAAGAACGCCGTGCTGCCGTTCGGCCACGCCGGTGAAGTGCTTCCGGTCCCCGTGCTGGTGGGACTGAGGAGAACGCCGTGCTGCCGTTCCGGCCACGCCGTGAAGCGCTTCCGGTCTCCGTGCTGGTGGGACTGAGGAGAACGCCGTGCTGCCGTTCCGGCCACGCCGTGAAGCGCTTCCGGTCTCCGTGCTGGTGGGACTGAGGAAGACGCCGTGCTGCCGTTCCCGGCCACGCCGGTGGTGCTTCCGGTCCCCGTGCTGGTGGGACTGAGGGAGAACGCCGTGCTGCCGTTCTGGCCACGCCGTGGCCC TR:VR 67:3 29:0 chr11 77365424 r_73_0 A A]chr11:95586676] . PASS SVTYPE=BND;MATEID=r_73_1 TR:VR 102:10 43:0 chr11 95586676 r_73_1 T T]chr11:77365424] . PASS SVTYPE=BND;MATEID=r_73_0 TR:VR 102:10 43:0 chr18 78134110 r_220 T . PASS END=78319623;SVTYPE=DEL;SVLEN=-185513 TR:VR 152:69 36:0 chr22 10719569 d_1515 A . Too_low_VAF END=10719643;SVTYPE=DEL;SVLEN=-74;SVINSLEN=14;SVINSSEQ=TTTCACTCGTGTCC TR:VR 217:3 97:1 chr7 8152980 i_1823 C . PASS END=8152980;SVTYPE=INS;SVINSLEN=384;SVINSSEQ=CCCCACCACCACCACCACCATCTCCTTCATCACCACTACCCCCACCACTACCACCATCACCTCCTCCACCATCACCACCACCACCACAACCACCATCTCCTTCATCACCACTACCCCCACCACTATCACCATCACCATCACCTCCACCACCACCACCATCTCCTTCAACACCACTACCCCCACCACTATCACCATCACCATCACCTCCATCCACCACTACCACCATCTATCACCATCACCATCACCACCACCACCACCATTATCTCCTTCATCACCACTACCCCCACCACTACCACCATCACCTTCACTACCACCATCTCCTCCACCACCACTACCACCACCACCACCAGCATCTCCTTCATCACCACTACCCCCACCACTATC TR:VR 43:5 24:0 chrUn_KI270538v1 78794 d_2203 C . Too_low_VAF END=79265;SVTYPE=DEL;SVLEN=-471;SVINSLEN=131;SVINSSEQ=ATCACAAATCAGTTTCTGAGAATGCTTCTGTCTAGTTTGTATGTGAAGATATTTCATTTTCCACCATACTCCACAAATCGCTCCAAATATCCACTTGCAAATACTACAAAAAGACTGTTTCAAAACTTCTC TR:VR 220:3 70:0 chr11 77415271 r_74_0 G [chr11:79965156[A . PASS SVTYPE=BND;MATEID=r_74_1 TR:VR 114:14 34:0 chr11 79965156 r_74_1 A [chr11:77415271[A . PASS SVTYPE=BND;MATEID=r_74_0 TR:VR 114:14 34:0 chr17 16162684 r_182_0 A [chr20:25756130[AATATTTAAGTG . Too_low_VAF SVTYPE=BND;MATEID=r_182_1;SVINSLEN=11;SVINSSEQ=AATATTTAAGT TR:VR 161:3 62:0 chr20 25756130 r_182_1 G [chr17:16162684[ACTTAAATATTG . Too_low_VAF SVTYPE=BND;MATEID=r_182_0;SVINSLEN=11;SVINSSEQ=ACTTAAATATT TR:VR 161:3 62:0 chr2 10846 r_236_0 G [chr2:15367[CGCGCAGGCGCAGAGAGGCGCACCGCGCCCGCGCAGGCGCAGAGAGGCGCACCGCGCCCGCGCAGGCGCAGAGAGGCGCACCGCGCCCGCGCAGGCGCAGAGAGGCGCACCGCGCCCGCGCAGGCGCAGAGAGGCGCACCGCGCCCGCGCAGGCGCAGAGAGGCG . PASS SVTYPE=BND;MATEID=r_236_1;SVINSLEN=164;SVINSSEQ=CGCGCAGGCGCAGAGAGGCGCACCGCGCCCGCGCAGGCGCAGAGAGGCGCACCGCGCCCGCGCAGGCGCAGAGAGGCGCACCGCGCCCGCGCAGGCGCAGAGAGGCGCACCGCGCCCGCGCAGGCGCAGAGAGGCGCACCGCGCCCGCGCAGGCGCAGAGAGGC TR:VR 64:18 28:0 chr2 15367 r_236_1 G [chr2:10846[GCCTCTCTGCGCCTGCGCGGGCGCGGTGCGCCTCTCTGCGCCTGCGCGGGCGCGGTGCGCCTCTCTGCGCCTGCGCGGGCGCGGTGCGCCTCTCTGCGCCTGCGCGGGCGCGGTGCGCCTCTCTGCGCCTGCGCGGGCGCGGTGCGCCTCTCTGCGCCTGCGCGG . PASS SVTYPE=BND;MATEID=r_236_0;SVINSLEN=164;SVINSSEQ=GCCTCTCTGCGCCTGCGCGGGCGCGGTGCGCCTCTCTGCGCCTGCGCGGGCGCGGTGCGCCTCTCTGCGCCTGCGCGGGCGCGGTGCGCCTCTCTGCGCCTGCGCGGGCGCGGTGCGCCTCTCTGCGCCTGCGCGGGCGCGGTGCGCCTCTCTGCGCCTGCGCG TR:VR 64:18 28:0 chr20 5856113 r_258_0 T T]chr5:124219806] . PASS SVTYPE=BND;MATEID=r_258_1 TR:VR 103:23 55:0 chr5 124219806 r_258_1 T T]chr20:5856113] . PASS SVTYPE=BND;MATEID=r_258_0 TR:VR 103:23 55:0 chr7 82908879 r_353 G . PASS END=87620218;SVTYPE=DUP;SVLEN=4711339;SVINSLEN=14;SVINSSEQ=TAAGATAAATAAGT TR:VR 121:37 48:0 chr11 78573925 d_306 G . PASS END=78574633;SVTYPE=DEL;SVLEN=-708 TR:VR 74:13 26:0 chr15 17072195 d_795 T . PASS END=17072477;SVTYPE=DEL;SVLEN=-282;SVINSLEN=108;SVINSSEQ=CAACTCTGTGTGATGAATGCACACATTACAAAGAAGTTTCTTAGAATGCTTTTGTCTAGTTTTTATATGAAGATATTTATCTCACAATAGGCCTCAAATGGCTCAGAA TR:VR 77:6 19:0 chr17 63012928 i_732 T . PASS END=63012928;SVTYPE=INS;SVINSLEN=94;SVINSSEQ=ATAGGCATGAGCTGCTGCACCTGGCTTTTTTTCTAAATGATATGTTTATACTCCTCCATATATATCCCCCTACCTACCAATTTTGACACACTGT TR:VR 70:25 21:0 chr2 43871194 i_1046 T . PASS END=43871194;SVTYPE=INS;SVINSLEN=444;SVINSSEQ=AAACTCTCACTATCTGGATAGAATTCTACCCTCTGGATAGAACTCTCTTCACTTTCTGGATAGGAATTCTCACCCCTCTGGATAGAACTCTCACTCTCTGATAGAATTCTCACTCTCTGGATAGAACTCTCACTCTCTAGGATAGAACTCTCACTATATCTGGATAGAATGCTCACTCTCTGGATAGAACTCTCACTATCTATCTGGATAGAACTCTCACCCTCTGGATAGAACTCTCAGTCTCTGGATAGAATTCTCACTCTAGATAGAACTCTCATCTATCTATCTCTGGATAGAATTCCTACTCTAGATAGAACTCTCACTATCTGTCTGGATAGAATTCTCACCATCTGAATAAAACTCTCACTGTGTGGGAATAGAACTCTCACTCTCTGGATAGAAATCTCACTTTCTATCTGGATAGAATTCTCACCATGTAGACAG TR:VR 44:3 13:0 chr2 90326386 i_1073 G . PASS END=90326387;SVTYPE=INS;SVINSLEN=381;SVINSSEQ=CGGTGGGCAGAAAGCCGTGGGGGCGGGGTGCAAAAAGCCGCAGCGCGCAGAAAGCCGCGGCGGCGGGGGACAAAAAGCCGCGGCCGCGTGGGGGGCAAAAAGCCCGCGGCGGGGGGACAAAAAGCCGCGGCGGCGGGGGTGCTAAAAAAGCCGCTGCGGGCAAATAAGTGCGGCACCGGCAGGGGGGTTAAAAAGCCGAGTCGGGCAAAAAGCCGGGTTGGGCAAAAAGCCACGGCGGCGGGGGGGAAAAAGCCGTGGCGGGCAGAAAGGCGCGGCGGCGTGGGGGAAAAGCCGCGGCGTTGGGGTCAAAAAAGCCGCGGCGGCGGGGGGGGCAAAAAGCCGTGACCGGCAAAAAGCCGTGGCGGCGGGGAACAAAAAGCG TR:VR 60:7 25:0 chr20 5856125 r_259_0 T [chr4:85112767[A . PASS SVTYPE=BND;MATEID=r_259_1 TR:VR 83:10 48:0 chr4 85112767 r_259_1 A [chr20:5856125[A . PASS SVTYPE=BND;MATEID=r_259_0 TR:VR 83:10 48:0 chr1 46241185 r_7_0 C ]chr3:126371359]CGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCAGCCCGGCCAGCCACCCCGTCCGGGAGGGAGATGGGGGGGTCAGCCCCCCCACCCGGCCAGCCGCCCCGTCCGGTAGGGAGGTAGGGGGGTCAGCCCCCCGCCTGGCCCAGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCT . Too_low_VAF SVTYPE=BND;MATEID=r_7_1;SVINSLEN=228;SVINSSEQ=CGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCAGCCCGGCCAGCCACCCCGTCCGGGAGGGAGATGGGGGGGTCAGCCCCCCCACCCGGCCAGCCGCCCCGTCCGGTAGGGAGGTAGGGGGGTCAGCCCCCCGCCTGGCCCAGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTC TR:VR 122:3 55:1 chr3 126371359 r_7_1 T TGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCTGGGCCAGGCGGGGGGCTGACCCCCCTACCTCCCTACCGGACGGGGCGGCTGGCCGGGTGGGGGGGCTGACCCCCCCATCTCCCTCCCGGACGGGGTGGCTGGCCGGGCTGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCG[chr1:46241185[ . Too_low_VAF SVTYPE=BND;MATEID=r_7_0;SVINSLEN=228;SVINSSEQ=GACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCTGGGCCAGGCGGGGGGCTGACCCCCCTACCTCCCTACCGGACGGGGCGGCTGGCCGGGTGGGGGGGCTGACCCCCCCATCTCCCTCCCGGACGGGGTGGCTGGCCGGGCTGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCG TR:VR 122:3 55:1 chr11 78575716 r_75_0 T TGTGCTAATTAAGTGTCTCT]chr11:81182939] . PASS SVTYPE=BND;MATEID=r_75_1;SVINSLEN=19;SVINSSEQ=GTGCTAATTAAGTGTCTCT TR:VR 142:11 50:0 chr11 81182939 r_75_1 C CAGAGACACTTAATTAGCAC]chr11:78575716] . PASS SVTYPE=BND;MATEID=r_75_0;SVINSLEN=19;SVINSSEQ=AGAGACACTTAATTAGCAC TR:VR 142:11 50:0 chr14 105612976 r_130 A . Too_low_VAF END=105751153;SVTYPE=DUP;SVLEN=138177;SVINSLEN=7;SVINSSEQ=AAAAATG TR:VR 85:4 35:1 chr21 10775867 r_275_0 A [chr21:10780533[T . Too_low_VAF SVTYPE=BND;MATEID=r_275_1 TR:VR 418:7 136:0 chr21 10780533 r_275_1 T [chr21:10775867[T . Too_low_VAF SVTYPE=BND;MATEID=r_275_0 TR:VR 418:7 136:0 chr22 16359959 i_1439 A . PASS END=16359960;SVTYPE=INS;SVINSLEN=325;SVINSSEQ=TGGAAAGGACTGGAATGGAGTGGAATGGAATGGAACGGACTCAAATAGAATGGAATGTAATGGAATTGACTCAAATGTAATGTAATGGAATGGAATAGCTTGAAATGGAATGGAAAGGAAATAAATGGAATAGAATTGAAGGGAATGGAATGGAATGGACTGGACTGGAATGGAATGGAATAGATTGAAGGAATGGAATGGAACTGAATGGAATGGACTCGAATGGAATGGAGTGGAATGGACTCTAATGGAATGGAATGGTCTCGAATAGAATGGAATGGAATGGAAATAACTCGAATGGAATGGAATGTACTAGAATGGAGTG TR:VR 86:6 23:0 chr7 115707319 r_365_0 A [chr7:115707867[TTAATATAATTATTTT . PASS SVTYPE=BND;MATEID=r_365_1;SVINSLEN=15;SVINSSEQ=TTAATATAATTATTT TR:VR 72:17 16:0 chr7 115707867 r_365_1 T [chr7:115707319[AAATAATTATATTAAT . PASS SVTYPE=BND;MATEID=r_365_0;SVINSLEN=15;SVINSSEQ=AAATAATTATATTAA TR:VR 72:17 16:0 chr1 46242958 r_8_0 A A[chr3:126371345[ . Too_low_VAF SVTYPE=BND;MATEID=r_8_1 TR:VR 115:3 53:1 chr3 126371345 r_8_1 A ]chr1:46242958]A . Too_low_VAF SVTYPE=BND;MATEID=r_8_0 TR:VR 115:3 53:1 chr11 79940527 r_76_0 T T]chr11:90079792] . PASS SVTYPE=BND;MATEID=r_76_1 TR:VR 123:12 40:0 chr11 90079792 r_76_1 C C]chr11:79940527] . PASS SVTYPE=BND;MATEID=r_76_0 TR:VR 123:12 40:0 chr22 16517176 r_289 A . Too_low_VAF END=34891309;SVTYPE=DEL;SVLEN=-18374133 TR:VR 105:5 48:0 chr5 22130900 r_321 A . PASS END=22140618;SVTYPE=DUP;SVLEN=9718 TR:VR 84:6 29:0 chr7 116792838 r_366_0 A A]chr7:131047883] . PASS SVTYPE=BND;MATEID=r_366_1 TR:VR 100:7 29:0 chr7 131047883 r_366_1 A A]chr7:116792838] . PASS SVTYPE=BND;MATEID=r_366_0 TR:VR 100:7 29:0 chr7 85170993 r_354 T . PASS END=86164257;SVTYPE=DEL;SVLEN=-993264 TR:VR 118:36 37:0 chrUn_KI270442v1 205431 i_2065 G . Too_low_VAF END=205431;SVTYPE=INS;SVINSLEN=1815;SVINSSEQ=CTCACAAATATCCCTTTTCAGATTCTTCAAAAAACTGTTTCCAAACTGCTTCATCAAAAGAAAGGTTCAACTCTTTGAGATCAATGCACACATAACAAAGAGGTTTCTCAGAATGCTTCTCTCTGGTTTTTATGTGAAGGTATTACTTTTTTACCATAGGTCTCAAACCGTAAACAAATATTCCTTTGCAGATTCTACAAAAAGTATGCTTGCAAACTGCTCAATAAACAGAAAGGTTCAACTTTGTGAGATGAATGCAAACATCACAAAGAAGTTTCTCTGAATGCTTCTATCTGGGTTTTAGGTGAAGATATTTACTTTTTCACCATAGGCCTCAAACCGCTCACAAATATCCCTTTGCAGATTCTACAAAATGAACTGTTGCCAAATTGCTCAATCAAAAGCAAGGTACAAATCTGTGAGATGAAAGCACACATCACAAAGAAGTTTCTCAGAAAGTTTCTGTCTAGTTTTTATATGCAGATATTTCCTTTTTCACCATAGGCCTCAAAGCACTCCAAATATCCATTTGCAAGTTCTACAAAAAAAGTGTTTCCAAACTGCTCAATCAAAAGAAAGTTTCAACTCTGTGAGGTGAATGCACACAGCACAAAGTAGTTTTTCAGAAAGCTTCTGCCTAGTTTTTATGTGAAGATATTTCCTATTTCACCATAGGCCCCAATTGGCTCAGAAATATCCCTTTACAGATTCTACAAAAAGACTCTTTCCAAACTTCTCAATCCAAAGGAAAGTTTCAACTCTGTAAGATGAATGCAGACATCACAAAGAAGTTTCTCAGAATGCTTCTGTCTAGTTTTTATGTGAAGATATTTCCTTTTTCACCATAGGCCTAAAACTGCTCACAAATATTCCATCTGCAGATTCTACAAAAAGACTGTTTCCAAACTGCTCAATCAAAAGAAAAGTTCAACTCTGTGAGATGAAAGCACACATCACAAAGAAGTTTCTCAGAAATCTTCTGTTTAGTTTTTTTGTGAAGATATTCCTTATTTCACCATAGGCCTGAAAGGGCTCACAAATATCCCTTTGCATATTCTACAAAAAGACTGCTTCCAAACTGCTCAATCAAAAGAGAAGTTCAACTCTGTGTGATGAATGCACACATAAAAAATTAGTTTCTCAGAATGCTTTTGTATACTTTTTATGTGAAGATATTTCTCTTTCACAATAGGCCTCAAATGGCTCAGAAATATCCCTTTGCAGATTGTACAAAAAGACTGTTTCCAAACTGCTCTATCAAAAGAAAGGTTCAACACTGTGAGATGAATGCACACATCACAAAGAAGTTTCTCAGAAAGCTTCTGTTTGGGTTTTATGTGAAGATATTTCTTTTTTCACCATAGGCCTCAATGGGCTCAGAAATATCCCTTTGCAGATTCTACAAAATGAATTGTTGCCAAACTGCTCAATCTAAAGAAAGTTTCAAATCTGTGAGATGAATGCACACATCATAAACAAGTTTCTCACAATGGATCTGTCTAGTTTTTATGTGAAGATATATTCTTTTTACACCATAGGCCTCAAAGCACTCATGAATATTCCTCTGCAGATTCTACAAAAAGACTGTTTCCAAACTGCTGCATCAAAAGAAATGTTCAACTCTGTGAGATGAATGCACACAGCACAAAGAAGTTTCTCAGAATGCTTCTGTCTGGTTTTCATTTGAAGATATTTCCTTTTTCACCATAGGCCTCAAATGGCTCAGAAATGCCCATTTACAGATTCTACAAAAAGAGTGTTTCCAAACTGCTCTTTCAAAAGATAAGTTTCATCTCTGTGAGATGAATGCAGACA TR:VR 206:7 83:0 chrUn_KI270589v1 10539 i_2079 A . PASS END=10540;SVTYPE=INS;SVINSLEN=343;SVINSSEQ=AGATATTTCCTTTCTACAATAGACCTCAAAGTGCTCCAAATGTCCACTTGCAGATCCTACAGAAAGAGAATTTCAAAACAGCTCAATCAAAAGAAAGGTTTAACTCTGTGAGATGAATACACACATCACAAAGAAGTTTCCCAGATTGCTTTTGTCTAGATTTTATGTGAAGATATTTCCTTTTCTGCCATAGGCCAAAAAGCACTCCAAATATGCACTTGAAGATTCTACAAAAACGTTGTTTCCATTCTGCTCAAACAAAAGAAAGATTCAACTCCATGAGATAAATGCACACATCACAAAGAGGTTTCTCAGAATTCTTCTCTCTAGTTTTTATATGAAG TR:VR 41:5 13:0 chrX 156029803 d_2256 T . Too_low_VAF END=156029892;SVTYPE=DEL;SVLEN=-89 TR:VR 318:10 197:0 chr10 132450154 r_22 T . PASS END=132450514;SVTYPE=DUP;SVLEN=360 TR:VR 45:7 19:0 chr11 80573778 r_77_0 G [chr11:81185999[TTAGCCCTCTTGCTATAAATAGAAAAGAGAATTTTAGAGAGCTGAAAGAA . PASS SVTYPE=BND;MATEID=r_77_1;SVINSLEN=49;SVINSSEQ=TTAGCCCTCTTGCTATAAATAGAAAAGAGAATTTTAGAGAGCTGAAAGA TR:VR 146:11 41:0 chr11 81185999 r_77_1 A [chr11:80573778[TCTTTCAGCTCTCTAAAATTCTCTTTTCTATTTATAGCAAGAGGGCTAAA . PASS SVTYPE=BND;MATEID=r_77_0;SVINSLEN=49;SVINSSEQ=TCTTTCAGCTCTCTAAAATTCTCTTTTCTATTTATAGCAAGAGGGCTAA TR:VR 146:11 41:0 chr12 25382906 r_88_0 T [chr4:63728748[T . PASS SVTYPE=BND;MATEID=r_88_1 TR:VR 77:12 36:0 chr4 63728748 r_88_1 T [chr12:25382906[T . PASS SVTYPE=BND;MATEID=r_88_0 TR:VR 77:12 36:0 chr2 10842 i_1022 A . PASS END=10842;SVTYPE=INS;SVINSLEN=425;SVINSSEQ=GGGGGCACCGCGCCCGCGCAGGCGCAGAGAGGGCGCACCGCGGGGCTCCGCGCAGGCGCAGAGGCGCACCGCGCCCGCGCAGGCGCAGAGCGCACCGCGCCCGACGCAGGCGCAGAGAGGCGCACCGCGCCGGCGCAGGCGCAGAGAGGCGCGACCGCGGCCGCGCAGGCGCAGAGAGGCGCACGCGCCCGCGCAGGCGCAGAGAGGCGCACCGGCGCCCGGCGCCAGGCGCAGAGAGGCGCACCGCGCTCGCGCAAATGCAGACTGTGGCAGACATGCGCCCGCGCATGGTAGTTTGCCACACCCTGTTTTAGAAAGCTCAGGTTTGTGATGTGATGAAGAAGGCGCCCGCGCAGGCGCAGAGAGGCGCACCGCGCCCGCGCAGGCGCAGAGAGGCGCGCACCGCGCCCGCGCAGGCGCAGAGA TR:VR 57:14 25:0 chr21 10786156 d_1489 G . Too_low_VAF END=10786439;SVTYPE=DEL;SVLEN=-283;SVINSLEN=110;SVINSSEQ=TGATGTGTGCATTCATCTCACGGAGTTGAACTTTTCTTTTGATTCAGCTGTTTTGAAGCACTTTTTGGAGGATCTGCGAGTGGACATTTGCAGCGATTTGAAGCCTATTT TR:VR 353:4 128:0 chr22 17411276 r_290 A . PASS END=25766644;SVTYPE=DUP;SVLEN=8355368 TR:VR 114:16 41:0 chr7 118224416 r_367 C . PASS END=122079756;SVTYPE=DEL;SVLEN=-3855340 TR:VR 88:31 42:0 chr7 86959511 r_355 G . PASS END=87210290;SVTYPE=DUP;SVLEN=250779;SVINSLEN=38;SVINSSEQ=TAGTCATTAATTTATGTCATAAATTTATCTTAATGTCA TR:VR 187:27 33:0 chr8 43770784 d_2027 A . PASS END=43770825;SVTYPE=INS;SVINSLEN=149;SVINSSEQ=AATTTTAACCTTTCTTTTGGTTCATTAGGTTGGAACACTCTATTTGGAGAATCTACAAACGGACATTTTAAGGAAAAACCCAATATTCCCAGATAAAAACCAGAAAGAAGCTATCGGTGAAACTTGTTCATGATGTGTGGATTCACCTC TR:VR 71:6 25:0 chrUn_KI270442v1 208841 d_2183 C . Too_low_VAF END=208944;SVTYPE=DEL;SVLEN=-103;SVINSLEN=102;SVINSSEQ=TAAAATGCTGCAAATATCCATCTTCAGATTCTACAAAAAGACTGTTTCCAAACTTCTCAATCAAAAGAAAAGTTCAACTCTGTGAGATGAAAGCACACATCA TR:VR 241:6 87:0 chrY 56841345 d_2371 C . Too_low_VAF END=56841692;SVTYPE=DEL;SVLEN=-347;SVINSLEN=7;SVINSSEQ=ACTGATC TR:VR 340:3 120:0 chr1 4939347 r_0 G . PASS END=4939724;SVTYPE=DUP;SVLEN=377;SVINSLEN=6;SVINSSEQ=CCATAT TR:VR 43:4 23:0 chr11 16016380 r_31 A . PASS END=57791286;SVTYPE=DUP;SVLEN=41774906;SVINSLEN=7;SVINSSEQ=GCAGCCT TR:VR 114:19 45:0 chr11 81182679 r_78 G . PASS END=81186308;SVTYPE=DUP;SVLEN=3629;SVINSLEN=8;SVINSSEQ=GGTTTCAC TR:VR 95:11 28:0 chr16 21600504 d_847 C . Too_small_size END=21600540;SVTYPE=DEL;SVLEN=-36 TR:VR 27:9 20:0 chr18 5607355 r_190 G . PASS END=5623162;SVTYPE=DUP;SVLEN=15807 TR:VR 109:7 27:0 chr2 226096708 d_1336 G . PASS END=226096819;SVTYPE=DEL;SVLEN=-111 TR:VR 44:8 17:0 chr2 61234 r_238 T . PASS END=1660176;SVTYPE=DEL;SVLEN=-1598942 TR:VR 95:8 40:0 chr21 46142480 i_1416 T . PASS END=46142480;SVTYPE=INS;SVINSLEN=76;SVINSSEQ=TCACAGTGAGCGTGCAGCTCTCACAGGTGGCGCGTCGGGAGCTGTTTCTTCCTCCCGTGAGGCCGCCGACCTTCTT TR:VR 56:4 14:0 chr4 49809690 i_1590 A . PASS END=49809691;SVTYPE=INS;SVINSLEN=172;SVINSSEQ=GAAGCATTCTCAGAAACTTCTTTGTGTTGTGTGTACTCAAGTAACAGTGTTGAACCTTCCTTTTGACAGAGCAGTTTTGAAACACTCTTTTGGTAGAATCTGCAAGTGGAAATTTGGATAGCTTTGAGGATTTCGTTGGAAACGGGTTATCTTCATATAAAATCTAGACAGA TR:VR 36:4 24:0 chr5 119661000 r_330 G . PASS END=119696841;SVTYPE=DUP;SVLEN=35841 TR:VR 91:8 45:0 chrY 56841710 d_2372 C . Too_low_VAF END=56841729;SVTYPE=INS;SVINSLEN=226;SVINSSEQ=ATCTAAGTTCTGGCTTCTTACAGGAGGCTTTACGACTTATCCCTGCGCTGATCACTAGTTGATGTAACACTTGTCTAGGCTCTGTCTACACGGGAATTTTCGCATATCTCTACACTGATCACCTAAGTAATGTAACCCTTGTCTAGGTTCAGCCTATTGGGGATTTCTGACATACCCATGCACTGATCACCGAAGTGATGTAAATCATTTCCAGGCTTTTTGTACA TR:VR 321:13 116:1 chr11 1646099 r_28_0 G [chr11:1648000[TTACCT . PASS SVTYPE=BND;MATEID=r_28_1;SVINSLEN=5;SVINSSEQ=TTACC TR:VR 51:6 22:0 chr11 1648000 r_28_1 T [chr11:1646099[GGTAAT . PASS SVTYPE=BND;MATEID=r_28_0;SVINSLEN=5;SVINSSEQ=GGTAA TR:VR 51:6 22:0 chr11 81430702 r_79 A . PASS END=87224505;SVTYPE=DEL;SVLEN=-5793803 TR:VR 121:32 55:0 chr12 33127522 r_89_0 C CTT]chr4:180957136] . PASS SVTYPE=BND;MATEID=r_89_1;SVINSLEN=2;SVINSSEQ=TT TR:VR 63:7 46:1 chr4 180957136 r_89_1 C CAA]chr12:33127522] . PASS SVTYPE=BND;MATEID=r_89_0;SVINSLEN=2;SVINSSEQ=AA TR:VR 63:7 46:1 chr14 106333284 r_131 A . Too_low_VAF END=106334119;SVTYPE=DEL;SVLEN=-835 TR:VR 121:3 44:0 chr16 22151624 r_168 T . PASS END=22214950;SVTYPE=DUP;SVLEN=63326 TR:VR 77:8 46:0 chr11 16556327 r_32_0 G G]chr11:27083006] . PASS SVTYPE=BND;MATEID=r_32_1 TR:VR 115:21 57:0 chr11 27083006 r_32_1 A A]chr11:16556327] . PASS SVTYPE=BND;MATEID=r_32_0 TR:VR 115:21 57:0 chr11 83393853 r_80_0 T T]chr11:89758179] . PASS SVTYPE=BND;MATEID=r_80_1 TR:VR 105:9 47:0 chr11 89758179 r_80_1 A A]chr11:83393853] . PASS SVTYPE=BND;MATEID=r_80_0 TR:VR 105:9 47:0 chr12 33390252 r_90_0 A ]chrX:57179197]A . PASS SVTYPE=BND;MATEID=r_90_1 TR:VR 57:8 37:0 chrX 57179197 r_90_1 A A[chr12:33390252[ . PASS SVTYPE=BND;MATEID=r_90_0 TR:VR 57:8 37:0 chr6 1243940 i_1740 G . PASS END=1243940;SVTYPE=INS;SVINSLEN=84;SVINSSEQ=GGTTCCCAAGCACTAGCCTTCATCTCCATCTGCACATGGGACGGCTTTGGAGAAAGACAATGTATGGAATAAATAGGTCATAAG TR:VR 49:7 22:0 chr10 132772451 d_270 C . PASS END=132772647;SVTYPE=DEL;SVLEN=-196;SVINSLEN=91;SVINSSEQ=AGCAGCCACCCCATGAAGAGTGGGACGGACACTCAGCACTGACACGGAGGCCACGGCAGCCACCCCATGAAGAAGAGTGGGACAGACACTC TR:VR 42:3 19:0 chr15 19834772 d_801 A . PASS END=19834979;SVTYPE=INS;SVINSLEN=332;SVINSSEQ=TGCTACAAAAGGAGAGCTTCCAAACTACTCACTCAAAAGAAAGGTTCAACTCTGTGAGATGAATGCATATATCACAAAGTAATTTTTCAGAATTCTTCTGTCTAATTTTTATGTGAACATATTTCCTTTTCCACTGTAGGCCTCAAACCACACAAAATGTCCATTTGCAGATAGTATCAAAAGGGTTTTTCAGAACTGCTTAATCAAAAGTAAGGTTCAACTCTGTGGGATGAATGCACATATCGCAGAAATAGGTTTGTCAGAATGCTTCTACCTAGTTTTTTTGTGAAGATATATCCTTTTCCACCTCAGGCCTCAAAGAGCTCTGCATG TR:VR 72:6 13:0 chr19 41859836 d_1146 C . PASS END=41859886;SVTYPE=DEL;SVLEN=-50 TR:VR 31:10 25:0 chr7 125111874 r_368 T . PASS END=125120639;SVTYPE=DUP;SVLEN=8765;SVINSLEN=8;SVINSSEQ=TTTTTAAA TR:VR 80:5 25:0 chrX 156030389 i_2140 G . Too_low_VAF END=156030389;SVTYPE=INS;SVINSLEN=289;SVINSSEQ=GGTTGGGGTTAGGGTTAGGGTTAGGAATTAAAGGGCTAAAGGGGTTAAGGTTAGAAGTTAGGAATTGAAAGGTTACAGTTAAGGTTAGGGCCGTTAGGGTTAGGGTTAGGGTTAGGAGTTGAGGTTGAGGGTTAGGGTTAGGAATTAGGAATTGAGGTTAAGGTTAGGTTAGGGTTAGGGTTGAGGTTAGGGTTGGGGTTTGAGGTTAAGGTTGAGGGTTGAGTTGGGTTAGGAGGTTAGGGATTAGGGTTAGGGTTGAGAGTTGAGGTTGAGGTTGAGGGTTGGGAAG TR:VR 297:3 180:0 chr21 10797665 i_1372 A . Too_low_VAF END=10797665;SVTYPE=INS;SVINSLEN=604;SVINSSEQ=CTCTTTTTGTAGAGTCTGCCATTGGATATTTGGAGCGCTGTGAATCCTATGGTGGAAAAGGACATATCTTCACATAAGAACTATAAAGCAGGTTTTCTAAAAACAACCTTGTAATGTGTGCATTCATCTCACAGACCTATTGTGACAAAGGAAATATCTTCACATTCAAAGTATAAAGAAAGTTTCTGAGATACTTCTTTGTGATATGTGTATTCATCTCACAGATTTGAACGTCTCTTTTAATTTAGCCCTTTGGAAACAGTCTTTTTGAAGAATCTGCAAACGGATATATGTGAGCACTTTGAGGCCTATGCAGGAAAAGAAGTATCTTCACAGAAAACTATAAAGTAGGTTTCTGAGAAACTGTTTTTTGATGTCTGCATTCATTTCACAGAGGTAAACAATTATTTTCTTTGATCAGTTGGGAAACTCTGTTCTTGTAGGATCTGCTAAGGGACATGTTTGAGTGCCTAGAGCCCTATTGTGAAAAAGATATTGTCTTCACATAAAAACTAGACAGAATTCTACTGAGAAACTGCTTGGTGATGTGCGCATTCATCTCACAGAATTGTAACTTTCCTTTTGATTAATCAGTTTAGAAACG TR:VR 321:15 133:1 chr6 1261016 i_1742 A . PASS END=1261016;SVTYPE=INS;SVINSLEN=128;SVINSSEQ=TTTGGAGAGGAGACCCAGCAATATAACTGAGGTCTGCCTGTATTTGGAGAGGGAGACCCACCAATATAACTGAGGTCTGCCTGTATTTGGAGAGGGAGACCCAGCAATATAACTGAGGTGCCTGTATT TR:VR 53:5 17:0 chr11 1716043 r_29 G . PASS END=25106450;SVTYPE=DEL;SVLEN=-23390407 TR:VR 111:22 28:0 chr11 85191454 r_81 A . Too_low_VAF END=85658384;SVTYPE=DEL;SVLEN=-466930 TR:VR 75:3 50:0 chr15 19837422 d_803 A . PASS END=19837709;SVTYPE=DEL;SVLEN=-287;SVINSLEN=116;SVINSSEQ=GTATGGTTCAACTCTGTAAGATAAATTCACACAACACACGGAAGTTTCTCAGAATGCTTCCGCCTAGTTGTTAAGTGAAGATATTTCCTTCTCCACCATATGCCTCAAAGCACACC TR:VR 70:6 13:0 chr16 23992088 r_169 C . PASS END=24193632;SVTYPE=DEL;SVLEN=-201544 TR:VR 53:11 50:0 chr2 11238 d_1172 A . PASS END=11232;SVTYPE=INS;SVINSLEN=81;SVINSSEQ=GGCGCAGAGAGGCGCACCGCGCCCGCGCAGGCGCAGAGAGGCGCACCGCGCCCGCGCAGGCGCAGAGAGGCGCACCGCGCC TR:VR 59:6 25:0 chr4 5316461 i_1547 A . PASS END=5316461;SVTYPE=INS;SVINSLEN=174;SVINSSEQ=TTATATATATTATATATATATAATATATATTATATATTATATGTAATATATATATTATATATATTATATATGTAATATATATAATATATACAATATATATTACATATATAATATATATAATATATATTACATATATAATATATATAATATATATTATATATGTAATATATATTA TR:VR 42:4 19:0 chr16 25899980 r_170 A . PASS END=25975855;SVTYPE=DEL;SVLEN=-75875 TR:VR 65:17 39:0 chr18 60917545 r_208_0 C [chr18:73666884[A . PASS SVTYPE=BND;MATEID=r_208_1 TR:VR 179:13 40:0 chr18 73666884 r_208_1 A [chr18:60917545[A . PASS SVTYPE=BND;MATEID=r_208_0 TR:VR 179:13 40:0 chrUn_GL000214v1 118968 i_2000 A . Too_low_VAF END=118968;SVTYPE=INS;SVINSLEN=283;SVINSSEQ=GCTGCTGGATGATGGCAGTAAGAACATATGGTATATTATTGATGAATGAGGTGATCAGAAGAATCTCCAGAGGAGGTCACGGGAGAACACAATGACATGAGTGACTGTCCTGCTTGGTTAGGAATGGGAAACGTAAAGTTGTGGAATTCTGTTGATGACGGATGTGAGAGTGGTGAAGCCCTGCGGGATGATGTAGAGGACTTCCACATCCCTGGTGAGGAGCTGCCTCCTTGGGTCTGAGTTTCTGGGAGGGGAGAGGGAGAAGCTGGGTGAGGCAGGCATG TR:VR 368:3 159:0 chr10 39375543 d_204 C . PASS END=39375663;SVTYPE=INS;SVINSLEN=120;SVINSSEQ=AAGTCCCAAATATCCCTTTGCAGATTCTACAAAAAGACTCTTTCCAAACAGCTCAATCAAAAGAAAGATTTAAGTCTGTGATTCGAATGGGCACTTCATAAAGAAGTTTCTCAGAAAGCC TR:VR 62:7 13:0 chr12 37328782 d_327 T . PASS END=37329058;SVTYPE=DEL;SVLEN=-276;SVINSLEN=104;SVINSSEQ=GAACATTTCTTTTGAAAGAGCAGTTTTGAAACACTCTTTTTGTAGAATCTGCTTGTGGATATTTGGAGCTTTGAGGAATTCGTTGTAAATGGGTATATCTACAT TR:VR 42:3 23:0 chr16 32422211 d_850 C . PASS END=32432728;SVTYPE=DEL;SVLEN=-10517 TR:VR 64:9 30:0 chr18 61432046 r_209_0 A A]chr18:73125274] . PASS SVTYPE=BND;MATEID=r_209_1 TR:VR 144:9 41:0 chr18 73125274 r_209_1 A A]chr18:61432046] . PASS SVTYPE=BND;MATEID=r_209_0 TR:VR 144:9 41:0 chr22 10723122 d_1526 A . PASS END=10723150;SVTYPE=INS;SVINSLEN=195;SVINSSEQ=TTCCATTCCAATCCATACCTTTTGGGTCCATTCCATTCCATTCCATTCCATTCGAGTCCTTTAAATTACATTCCATTCCACTCGATTCCATTACACTCCATTCAATTCGAGTCCATTCAATTGCACTCCATTAGATTCTAGTCCATTCCCTTTCTATTCCGTTTGAATCTGTTTCCATTCCATTTGAGACCATAA TR:VR 208:30 96:1