##fileformat=VCFv4.3 ##fileDate=20230117 ##source=nanomonsv-0.5.0 ##reference=/projects/jfan_prj/jfan_prj/Nanopore_Testing/2021_nanopore_sv_testing/scratch/depth_testing/POG/COLO829/hg38_no_alt.fa ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##FILTER= ##FILTER= ##FILTER= ##FILTER= ##FILTER= ##FILTER= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##ALT= ##ALT= ##ALT= ##FORMAT= ##FORMAT= #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT TUMOR CONTROL chr1 10467 d_0 C . Too_low_VAF END=10574;SVTYPE=DEL;SVLEN=-107;SVINSLEN=6;SVINSSEQ=CTAACA TR:VR 99:4 63:1 chr1 214331373 d_187 C . PASS END=214331428;SVTYPE=DEL;SVLEN=-55 TR:VR 33:23 19:0 chr12 38279370 d_360 C . PASS END=38279639;SVTYPE=DEL;SVLEN=-269 TR:VR 42:16 17:0 chr12 99765897 r_133_0 A ACTAAGG]chr5:29175292] . Too_low_VAF SVTYPE=BND;MATEID=r_133_1;SVINSLEN=6;SVINSSEQ=CTAAGG TR:VR 81:3 30:0 chr5 29175292 r_133_1 G GCCTTAG]chr12:99765897] . Too_low_VAF SVTYPE=BND;MATEID=r_133_0;SVINSLEN=6;SVINSSEQ=CCTTAG TR:VR 81:3 30:0 chr13 98010744 d_417 T . PASS END=98011023;SVTYPE=DEL;SVLEN=-279 TR:VR 56:23 19:0 chr16 73643350 r_221 T . PASS END=73652188;SVTYPE=DUP;SVLEN=8838 TR:VR 58:6 22:0 chr2 181729636 r_300 T . PASS END=182044018;SVTYPE=DUP;SVLEN=314382 TR:VR 106:11 34:0 chr20 37452709 d_1182 A . PASS END=37453119;SVTYPE=DEL;SVLEN=-410 TR:VR 44:16 21:0 chr3 170038201 r_367 G . PASS END=170398281;SVTYPE=DUP;SVLEN=360080 TR:VR 96:16 41:0 chr4 47778607 r_380 A . PASS END=47784116;SVTYPE=DUP;SVLEN=5509 TR:VR 49:3 32:0 chr7 96030743 d_1752 A . PASS END=96031197;SVTYPE=DEL;SVLEN=-454 TR:VR 38:18 20:0 chr8 86201574 d_1852 G . PASS END=86201643;SVTYPE=DEL;SVLEN=-69 TR:VR 106:47 12:0 chr9 39571959 r_521_0 A [chr9:42323326[C . PASS SVTYPE=BND;MATEID=r_521_1 TR:VR 52:9 27:0 chr9 42323326 r_521_1 C [chr9:39571959[C . PASS SVTYPE=BND;MATEID=r_521_0 TR:VR 52:9 27:0 chr1 105476238 d_36 A . PASS END=105476684;SVTYPE=DEL;SVLEN=-446 TR:VR 31:22 6:0 chr10 120854174 d_271 T . Too_small_size END=120854218;SVTYPE=DEL;SVLEN=-44 TR:VR 41:9 13:0 chr11 134645098 r_104 C . PASS END=134761190;SVTYPE=DUP;SVLEN=116092 TR:VR 67:5 34:0 chr11 93452763 d_320 G . PASS END=93453278;SVTYPE=DEL;SVLEN=-515 TR:VR 32:12 19:0 chr12 41856185 r_115 T . PASS END=41940228;SVTYPE=DUP;SVLEN=84043 TR:VR 89:20 43:0 chr12 99765901 r_134_0 C [chr5:29175335[A . PASS SVTYPE=BND;MATEID=r_134_1 TR:VR 81:6 30:0 chr5 29175335 r_134_1 A [chr12:99765901[A . PASS SVTYPE=BND;MATEID=r_134_0 TR:VR 81:6 30:0 chr13 98436397 r_154 C . PASS END=98775665;SVTYPE=DUP;SVLEN=339268 TR:VR 108:32 44:0 chr15 62595386 i_290 C . PASS END=62595386;SVTYPE=INS;SVINSLEN=103;SVINSSEQ=TCCAGCAGCCTGGGCAACAGAGCAAGACTCTGTCTCAAAAAAAAAAAAAATAATAATAACTATGAATTTTAAGTCAAAGTATTGCATGCAAATGGCTAAAAGT TR:VR 17:11 17:0 chr16 74278819 r_222_0 C CTCAGAGCCTCAGAGCC[chr8:68481387[ . PASS SVTYPE=BND;MATEID=r_222_1;SVINSLEN=16;SVINSSEQ=TCAGAGCCTCAGAGCC TR:VR 117:18 28:0 chr8 68481387 r_222_1 T ]chr16:74278819]GGCTCTGAGGCTCTGAT . PASS SVTYPE=BND;MATEID=r_222_0;SVINSLEN=16;SVINSSEQ=GGCTCTGAGGCTCTGA TR:VR 117:18 28:0 chr18 74187036 d_874 T . Too_small_size END=74187072;SVTYPE=DEL;SVLEN=-36 TR:VR 29:12 17:0 chr2 183928252 d_1099 C . PASS END=183928313;SVTYPE=DEL;SVLEN=-61 TR:VR 32:10 15:0 chr2 24838708 r_270 C . PASS END=24848475;SVTYPE=DUP;SVLEN=9767 TR:VR 28:8 17:0 chr20 39093721 d_1183 T . PASS END=39093811;SVTYPE=DEL;SVLEN=-90;SVINSLEN=3;SVINSSEQ=TGC TR:VR 38:15 21:0 chr4 17614013 d_1416 T . PASS END=17614124;SVTYPE=DEL;SVLEN=-111 TR:VR 34:12 12:0 chr6 27208655 d_1618 G . PASS END=27208729;SVTYPE=DEL;SVLEN=-74 TR:VR 45:6 22:0 chr10 42070111 d_239 A . Too_low_VAF END=42070448;SVTYPE=DEL;SVLEN=-337 TR:VR 714:3 262:1 chr11 94557103 r_93 A . PASS END=96928999;SVTYPE=DUP;SVLEN=2371896 TR:VR 74:14 23:0 chr13 100900451 r_156 T . PASS END=100913492;SVTYPE=DUP;SVLEN=13041 TR:VR 50:5 25:0 chr17 22150007 d_761 C . Too_small_size END=22150047;SVTYPE=DEL;SVLEN=-40 TR:VR 127:10 48:0 chr18 76954643 d_875 T . PASS END=76955226;SVTYPE=DEL;SVLEN=-583 TR:VR 27:3 17:0 chr19 27611479 i_499 G . PASS END=27611482;SVTYPE=INS;SVINSLEN=49;SVINSSEQ=TATACATTCATCTCACGAATTAAAGCTTTCTTTTGATTGAGCTATTTGG TR:VR 39:11 14:0 chr2 184039761 r_301_0 T T]chr2:196692157] . PASS SVTYPE=BND;MATEID=r_301_1 TR:VR 88:20 26:0 chr2 196692157 r_301_1 T T]chr2:184039761] . PASS SVTYPE=BND;MATEID=r_301_0 TR:VR 88:20 26:0 chr2 26376343 r_271_0 A [chr2:148977378[C . PASS SVTYPE=BND;MATEID=r_271_1 TR:VR 63:15 31:0 chr2 148977378 r_271_1 C [chr2:26376343[C . PASS SVTYPE=BND;MATEID=r_271_0 TR:VR 63:15 31:0 chr20 39413979 d_1184 T . PASS END=39414815;SVTYPE=DEL;SVLEN=-836 TR:VR 51:4 18:0 chr5 39226493 r_405 T . PASS END=39232146;SVTYPE=DUP;SVLEN=5653 TR:VR 46:7 25:0 chr6 60474010 r_445_0 T [chr6:60474874[C . PASS SVTYPE=BND;MATEID=r_445_1 TR:VR 72:18 15:0 chr6 60474874 r_445_1 C [chr6:60474010[C . PASS SVTYPE=BND;MATEID=r_445_0 TR:VR 72:18 15:0 chr7 145916152 r_484 C . PASS END=145976285;SVTYPE=DUP;SVLEN=60133;SVINSLEN=3;SVINSSEQ=ATG TR:VR 182:17 28:0 chr7 61049586 d_1732 G . Too_low_VAF END=61049710;SVTYPE=DEL;SVLEN=-124 TR:VR 96:4 21:0 chr7 98110800 r_476 G . PASS END=98118950;SVTYPE=DUP;SVLEN=8150 TR:VR 61:10 21:0 chrX 54829549 r_541 C . PASS END=54847230;SVTYPE=DUP;SVLEN=17681 TR:VR 64:11 33:0 chr1 112867406 d_38 G . PASS END=112867637;SVTYPE=DEL;SVLEN=-231;SVINSLEN=12;SVINSSEQ=CTGTAATGAAAG TR:VR 30:13 26:0 chr11 14300403 r_72 T . PASS END=14813663;SVTYPE=DUP;SVLEN=513260 TR:VR 79:21 34:0 chr13 104186725 r_157_0 T T[chr18:37242592[ . PASS SVTYPE=BND;MATEID=r_157_1 TR:VR 68:15 40:0 chr18 37242592 r_157_1 G ]chr13:104186725]G . PASS SVTYPE=BND;MATEID=r_157_0 TR:VR 68:15 40:0 chr16 81372473 r_223_0 G ]chr8:51830536]T . PASS SVTYPE=BND;MATEID=r_223_1 TR:VR 69:6 28:0 chr8 51830536 r_223_1 T T[chr16:81372473[ . PASS SVTYPE=BND;MATEID=r_223_0 TR:VR 69:6 28:0 chr2 184039766 r_302_0 G [chr2:196692155[T . PASS SVTYPE=BND;MATEID=r_302_1 TR:VR 88:14 26:0 chr2 196692155 r_302_1 T [chr2:184039766[T . PASS SVTYPE=BND;MATEID=r_302_0 TR:VR 88:14 26:0 chr2 306851 i_543 G . PASS END=306852;SVTYPE=INS;SVINSLEN=112;SVINSSEQ=GCGGCGTTAATACACACACAGGTAGCGAGGAGGCCGGCGTGTTAATACACACACAGGTAGTGAGGAGGCCGGGGTGTTAATACACACACAGGTAGCGAGGGAGGCCGGCGTG TR:VR 26:4 20:0 chr3 172193713 d_1365 G . PASS END=172194098;SVTYPE=DEL;SVLEN=-385 TR:VR 44:33 23:0 chr4 715936 i_932 C . Too_low_VAF END=715936;SVTYPE=INS;SVINSLEN=360;SVINSSEQ=TGTGAGTGTGAGAACTGGGCGTCCGGTGCTGGGACCCTGGTAGACACTGTGAGTGTGAGAACTGGCGTCGGTGCTGGGACCCTGTAGACACTGTGAGTGTGAGAACCGGGCGTCGGTGCTGGGACCCTGTAGACACTGTGAGTGTGAGAACTGGGCGTCTGTGCTGGGACCCTCTAGACACTGAGTGTGAGAACTGGGCGTCGGTGCTGGGACCCTGTAGACACTGTGAGTGTGAGAACTGGGCGTCGGTGCTGGGACCCTGTAGACACTGAGTGTGAGAACTGGGCGTCGGTGCTGGGACCCTGTAGACACTGAGTGTGAGAACTGGGCAGGCCGGTGCTGGGACCCTGTAGACACTGT TR:VR 64:3 11:0 chr6 27723883 d_1619 A . PASS END=27724608;SVTYPE=DEL;SVLEN=-725 TR:VR 56:9 18:0 chr6 60555323 r_446_0 T T]chr6:60555355] . PASS SVTYPE=BND;MATEID=r_446_1 TR:VR 55:19 20:0 chr6 60555355 r_446_1 T T]chr6:60555323] . PASS SVTYPE=BND;MATEID=r_446_0 TR:VR 55:19 20:0 chr7 988981 i_1150 T . PASS END=988981;SVTYPE=INS;SVINSLEN=76;SVINSSEQ=ACACCCAGGACTACCCCTGCCCGACCCTGTGGGACCCCCACCCCTCTGATGCTGTCTGCAGCTCAGTCCCTGCCAA TR:VR 63:36 17:0 chr8 143395557 d_1885 C . PASS END=143396036;SVTYPE=DEL;SVLEN=-479 TR:VR 26:3 21:0 chrX 55052050 d_2052 C . PASS END=55052551;SVTYPE=DEL;SVLEN=-501 TR:VR 34:8 20:0 chr1 113447385 r_23 C . PASS END=114010891;SVTYPE=DUP;SVLEN=563506 TR:VR 91:7 29:0 chr11 95704249 r_95 T . PASS END=96658903;SVTYPE=DUP;SVLEN=954654 TR:VR 81:6 31:0 chr13 108258187 d_420 T . PASS END=108258952;SVTYPE=DEL;SVLEN=-765;SVINSLEN=1;SVINSSEQ=A TR:VR 23:6 18:0 chr13 98641431 r_155 A . PASS END=98818313;SVTYPE=DUP;SVLEN=176882 TR:VR 119:11 37:0 chr15 72067695 r_187 T . PASS END=72234153;SVTYPE=DUP;SVLEN=166458 TR:VR 60:8 18:0 chr16 34576306 d_633 A . Too_low_VAF END=34576491;SVTYPE=INS;SVINSLEN=266;SVINSSEQ=GATCGAATGGAATCATCGAATAACATCGAATGGAATCATCGTCGAATGGAGTCTAATGGAATCATCAAATGGACTCGAACGGAATCGTCATGGAATGTAATTGAATAGAATCTTCTAATGGACTCAAGTGGAATCATCATCGAATGCAAGCGAATGGAATCATCATCGAATTTCATCGAATGGAGTCATCATCATATGGAATCGAGTGGAAGCATTGAATGGGCTCAAAAGAAATCATCGGAGAATGGAATTGAATGGAATCATCA TR:VR 364:4 109:1 chr2 185697909 d_1100 A . PASS END=185699703;SVTYPE=DEL;SVLEN=-1794 TR:VR 43:19 20:0 chr20 40622207 d_1185 G . PASS END=40622561;SVTYPE=DEL;SVLEN=-354 TR:VR 30:7 15:0 chr21 16160581 r_341 T . PASS END=16185555;SVTYPE=DUP;SVLEN=24974 TR:VR 63:11 32:0 chr4 1810680 d_1408 G . PASS END=1811287;SVTYPE=DEL;SVLEN=-607 TR:VR 60:37 15:0 chr5 13067958 d_1540 T . PASS END=13068075;SVTYPE=DEL;SVLEN=-117;SVINSLEN=5;SVINSSEQ=ATTTA TR:VR 37:17 11:0 chr6 118688677 r_448 T . PASS END=146013476;SVTYPE=DEL;SVLEN=-27324799 TR:VR 85:15 33:0 chr7 99050965 r_477_0 A A[chr9:97555469[ . PASS SVTYPE=BND;MATEID=r_477_1 TR:VR 98:14 36:0 chr9 97555469 r_477_1 T ]chr7:99050965]T . PASS SVTYPE=BND;MATEID=r_477_0 TR:VR 98:14 36:0 chrX 136353643 d_2070 A . Too_small_size END=136353686;SVTYPE=DEL;SVLEN=-43 TR:VR 24:14 13:0 chrX 55138487 d_2053 C . PASS END=55139780;SVTYPE=DEL;SVLEN=-1293 TR:VR 41:14 15:0 chr1 113538932 d_39 A . PASS END=113540105;SVTYPE=DEL;SVLEN=-1173 TR:VR 58:8 16:0 chr11 15712212 r_73_0 T [chr13:73056395[A . PASS SVTYPE=BND;MATEID=r_73_1 TR:VR 48:11 23:0 chr13 73056395 r_73_1 A [chr11:15712212[A . PASS SVTYPE=BND;MATEID=r_73_0 TR:VR 48:11 23:0 chr11 96796503 d_321 A . PASS END=96796900;SVTYPE=DEL;SVLEN=-397 TR:VR 49:6 26:0 chr13 110253096 i_203 C . PASS END=110253096;SVTYPE=INS;SVINSLEN=301;SVINSSEQ=ATATACAGATAACTATAAGTACGTATGTATTACATATACAGATAACTATAAGTACGTATGTATTACATATACAGATAACTATAAGTACGTATGTATTACATATACAGATAACTATAAGTACGTATGTATTACATATACAGATAACTATAAGTACGTATGTATTACATATACAGATAACTATATAAGTACGTATGTATTACATATACAGATAACTATAAGTACGTATGTATTACATATACATATAACTATAAGTACGTATGTATTACATATATACATATATATATATGCGTACGTATATATA TR:VR 24:3 15:0 chr14_KI270722v1_random 111226 i_264 A . PASS END=111226;SVTYPE=INS;SVINSLEN=97;SVINSSEQ=CGAACCTTTAGACCCCAGCAGCAGTGCTCTTGAATCCTACGTGGAGGAAAACATTCAGACACTCGTAGCATTGTTCTCGAATCACATGTGAGGGACA TR:VR 25:4 7:0 chr15 73969807 d_600 T . PASS END=73970350;SVTYPE=DEL;SVLEN=-543;SVINSLEN=3;SVINSSEQ=ATG TR:VR 34:20 14:0 chr16 34576505 i_321 A . Too_low_VAF END=34576505;SVTYPE=INS;SVINSLEN=1167;SVINSSEQ=GAATCATTTTCAAATGGAATCAAATGGAATCATCTAATGGACTCGAATGGAATCATTGGATGTACTCGAATGAAATCATCGAATGGACTCGAATGGAATCATCATCGAATGGAATCAAATGGAATCCTCGAATAGAATCAGATGGAATCATCAAATGGAATCGAATGTAATCATCATCAAATGGAATAGAATGGAGTGATCGAATGGAATCGATGGCAATCATCATCCACTGGAATCAAATGGAATCATTGAATGGAATCGAATGGAATCAATGTCAAGTGGAATCGAGTGGAATCATCGAAAGAAATCGAATGGAATCATTGTCGAATGGAATGGAATGGAATCAAAGAATTGAATTGAATAGAATCACCAATGAATTGAATCGAATGGAATCCTCATCGAATGGAATCGAAGGGAATCATTGGATGGGCTCAAATAGTATCATCATCTAATGGAATCATGTGGAATCATCTAAGGGACACAAATAGAATCATCATTGAATGGAATCGAATGGAATCATCTAATGTACTCGAATGGAATCACCATTGAATAGAATAGAATGGAATCACCGAATGGAATCAAATGGAATCATCATCATATGGAATTGAGTGGAATCATCGTATGGACTCGAATGTAATCATCAGAGACTGGAATCAAATGGAATCATTAAATGGACTCTAATGGAATCATCATCGATTGGAATAGAATGGAATCATTGAATGGACTCCAATGGAATCATCACCAAATATAATCAAAAGAAATCATCAAATGGATTCGAATAGAATCATCGAATGGACTCGAATGGAATCATCATCGAATGGAATCAAATGGAATCATCAAATGGACTCGAATGAAATCATCATCAAACGGAATCGAATGGAATCATTGAATGGAAAGGAATGGAATCATCATGGAATGGAAACGAATGGAATCACTGAATGGACTCGAATGGGATCATCATCAAATGGAATCGAATGGAATCATCTAATGAACTTGAAAGGAATCATCATCAAATGAAGTCAAATGGAATCACCAAATCGACATGAATGGAATCATCATTGAATAGAATCGAATGGAATGATTGAATGGGCTAGAATGGAATCATCTTTGAACGGAATCAAATGGAATCATCATCGAATGGAATCGAATGGAAATGTCAACCAATTG TR:VR 350:6 105:0 chr17_GL000205v2_random 17225 d_798 C . Too_low_VAF END=24927;SVTYPE=DEL;SVLEN=-7702;SVINSLEN=77;SVINSSEQ=AATCATTCAGAACCCAGTAGCAGTGTCCTGGTTTCCTATATGAAGGAAAAACACTAAGAACCCAGCAGCAGTGTTCC TR:VR 204:6 107:0 chr2 186504838 d_1101 A . PASS END=186505093;SVTYPE=DEL;SVLEN=-255 TR:VR 42:16 21:0 chr20 28799104 i_695 T . Too_low_VAF END=28799105;SVTYPE=INS;SVINSLEN=412;SVINSSEQ=CCTGGTGTGCCATTTTTTAAGCCTGTTGAAAAAGTGCAGTATTAGTGTGGGAGTGACCCGATTTTCCAGGTGCCGTCTGTCATCCCTTTATTTGACTAGGAAAGGGAACTCCCTGACCACTTCCACTTCCCATGTGAGGAAATGCCTCGCTCTGCTTCAGCCCATGCATGGCACCCTGCACCCAGTATCCTGTGCCCACAGTCTGGCACTCCCTAGTGAGATGAACCTGGTATCTCAGATGGAAATGAAGAAATCACCCATCTTCTGCTTCACTCATGATGGGAACTGTAGAACAGAGCTGTTCCCATTTGGCCATCTTGACTGCTGCCTCATTTGCCAGTTTGCTTCTGTGTAGTTATTATGTGAAAATATTTCCTTTTCCACCATAGGCTGCAAAGGGCTCCAAATATCC TR:VR 257:3 123:1 chr20 44396571 d_1186 A . PASS END=44397033;SVTYPE=DEL;SVLEN=-462 TR:VR 36:11 13:0 chr21 19973603 i_809 T . PASS END=19973603;SVTYPE=INS;SVINSLEN=945;SVINSSEQ=ACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAGATATTAAAGTCTTTATTTGCCCCCCCCCCATTTTTATTTTCAGTAATACAGGGTAAAATGAGGAAGGATTACTTGATCTGGCCATCTATGGCCATTTTATGGAATGACAAACTAAGTTCAATACTGATAGGAGTTGTATTCTGTGTATACATATAATAGAGTATATACTGTGTGTATAAAAAATTCAAGCATATGGAAAAACTTATTTAATCCAGTAATAAACCTTTATATTTTCTCATCAGTTTAATAATAACATTTTTTGCCAGTAATTGGGTATATTTTGGGAAATAGTAGAATAAAGATTTGTAGACTCTCTTACATCTCCTAAAAGAAAATTCACTAAGCATGTATGTGGAAAACATCTTAAAATAAAGATAGATAAGAACGTTTTTGTGAATTAAAAAAGTAATGTGAACATGTTAAGGTATTTGAACTTACATTTAAATTGGATTATAAGTAACTTAACATTTTTAATGCAAGCATATTAACCTTCTTGTGCTTATGAGATTATTTTGCCAAATTGTAGGACAGAGGAAACTGCTGACTCCACAAAGATCTTCCCTTTGACCAGTTCTCTACTAGGAGCTTAGTTTCCTGATTTTTAGTACAATTTGATATTGAGGAACATATATTTAATAAGGCCGGGTACTTAGGTATAATAATTGGGTAAATTGTACCTTTTATTTTGGCCCTAACTGGTCACACTTCTGGGAATATTCTTCCCCTATCAGGAATTTCCATGTTACCAATATAATTTTGGGATTCAGTCACCTTTATTAGACATGTGGCCCCATGTGAAGTTTCTTTTTCTTTCTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTAA TR:VR 43:6 15:0 chr21 7940500 d_1221 T . Too_low_VAF END=7940538;SVTYPE=INS;SVINSLEN=53;SVINSSEQ=CGTGTCCATTCCACTCCAGTCCATTCCATTCGAGTAAATTCCAATCCAGTCCG TR:VR 403:3 156:1 chr3 172695378 d_1367 T . PASS END=172695582;SVTYPE=DEL;SVLEN=-204 TR:VR 43:3 19:0 chr4 182702924 r_393_0 G [chr9:37259003[T . PASS SVTYPE=BND;MATEID=r_393_1 TR:VR 52:9 33:0 chr9 37259003 r_393_1 T [chr4:182702924[T . PASS SVTYPE=BND;MATEID=r_393_0 TR:VR 52:9 33:0 chr5 132955319 d_1581 T . PASS END=132956646;SVTYPE=DEL;SVLEN=-1327 TR:VR 22:11 19:0 chr6 119732049 r_449 G . PASS END=119762771;SVTYPE=DUP;SVLEN=30722 TR:VR 71:11 32:0 chr7 215926 d_1678 G . PASS END=216198;SVTYPE=DEL;SVLEN=-272;SVINSLEN=7;SVINSSEQ=GGGGAGC TR:VR 74:5 15:0 chr7 99050977 r_478_0 A ]chr9:97591745]G . PASS SVTYPE=BND;MATEID=r_478_1 TR:VR 93:9 32:0 chr9 97591745 r_478_1 G G[chr7:99050977[ . PASS SVTYPE=BND;MATEID=r_478_0 TR:VR 93:9 32:0 chrX 137582967 r_557 G . PASS END=137588925;SVTYPE=DUP;SVLEN=5958 TR:VR 22:3 23:0 chr1 224014009 i_63 G . PASS END=224014009;SVTYPE=INS;SVINSLEN=474;SVINSSEQ=GAATGGAGTGGAATGTATGCGAATGGAATGGAATGGAATTGAATGGATTCGAGTCAAACGGAATGTAATGGTATGGAATGGACTCGAATGGAATGGAATGTAATGGAATGAAATGGATGCGAATGGAATGGACTCGAATGGAATGGATGGAATGGAATGGAGTGGAATGGAATGGACTCGAATGGTATGGAATGGAATTGAATGGACTCGATAGGAATGGAATGGAATGGATTGGACTCGAAAGGAATGTAATGGAATGAAATGTGCTGGAATGGAATGGAATGGAATGGAATAAAATGTAATGGAATGGACTCGAATGGAATACAGTTGAATTGAATGGACCCGAAAGCAATGGAATGGAATGGAACGGATTGGAAGGGAATGGAATGGAATGAAATGGAAAAGACTGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATG TR:VR 52:3 17:0 chr13 110255707 i_204 A . Too_small_size END=110255707;SVTYPE=INS;SVINSLEN=13;SVINSSEQ=AGGCAGGAAGGGA TR:VR 27:3 16:0 chr14_KI270723v1_random 33874 r_175_0 C [chr18:107071[CTTTGTTGATCAGTTCAGAGATGTGTT . Too_low_VAF SVTYPE=BND;MATEID=r_175_1;SVINSLEN=26;SVINSSEQ=CTTTGTTGATCAGTTCAGAGATGTGT TR:VR 184:3 109:0 chr18 107071 r_175_1 T [chr14_KI270723v1_random:33874[ACACATCTCTGAACTGATCAACAAAGT . Too_low_VAF SVTYPE=BND;MATEID=r_175_0;SVINSLEN=26;SVINSSEQ=ACACATCTCTGAACTGATCAACAAAG TR:VR 184:3 109:0 chr15 74273909 r_188 G . PASS END=74291850;SVTYPE=DEL;SVLEN=-17941 TR:VR 37:10 31:0 chr16 85471518 r_224 T . PASS END=86099248;SVTYPE=DUP;SVLEN=627730 TR:VR 92:17 31:0 chr2 91435586 r_285 A . Too_low_VAF END=91436145;SVTYPE=DUP;SVLEN=559 TR:VR 201:3 90:0 chr20 44767722 d_1187 A . Too_small_size END=44767762;SVTYPE=DEL;SVLEN=-40 TR:VR 38:11 14:0 chr3 173092078 r_368 G . PASS END=173104459;SVTYPE=DUP;SVLEN=12381;SVINSLEN=3;SVINSSEQ=TTT TR:VR 79:15 23:0 chr6 119817390 r_450 C . PASS END=119820006;SVTYPE=DUP;SVLEN=2616 TR:VR 45:9 23:0 chr7 148563509 d_1774 A . Too_small_size END=148563549;SVTYPE=DEL;SVLEN=-40 TR:VR 69:24 18:0 chr1 117881660 r_24 T . PASS END=117891444;SVTYPE=DUP;SVLEN=9784 TR:VR 45:3 23:0 chr11 1705414 d_295 C . Too_small_size END=1705459;SVTYPE=DEL;SVLEN=-45 TR:VR 23:19 14:0 chr12 43053135 d_361 G . PASS END=43053453;SVTYPE=DEL;SVLEN=-318 TR:VR 48:24 16:0 chr16 34576561 i_323 T . Too_low_VAF END=34576564;SVTYPE=INS;SVINSLEN=504;SVINSSEQ=CATCAAACGGAATCGAATGGAATCATTGAATGGAAAGGAATGCAATCATCATGGAATGGAAACGAATGGAATCACTGAATGGACTCGAATGGGATCATCATCAAATGGAATCGAATGGAATCATCTAATGAACTTGAAAGGAATCATCATCAAATGAAGTCAAATGGAATCACCAAATCGACATGAATGGAATCATCATTGAATGGAATCGAATGGAATGATTGAATGGGCTTGAATGGAATCATCTTTGAATGGAATCAAATGGAAACATCATCGAATGGAATCGAATGGAAATGTCAACCAATTGAATAAATAGAATCATCATGAAATTGAATCGAATGGCTCATCATCGAATCAAATCAAATGGAATCATCATCGTATGGAATTGAATGGAATCATTGAATGGAATTGAATGGAATCATCATTGAATGGAACCGAATGAAATCATCAACGAATGGAATCCAATGTAATCATCATAGAATTGAAACCAATGGATTCATTAAA TR:VR 353:5 104:0 chr17_GL000205v2_random 17605 d_799 G . Too_low_VAF END=17796;SVTYPE=DEL;SVLEN=-191 TR:VR 179:5 82:1 chr17_KI270730v1_random 61846 d_832 A . PASS END=61835;SVTYPE=INS;SVINSLEN=144;SVINSSEQ=ATGGAATGGAATGGAATGGACTTGAACAGAATGGAGTCAAATGAAATGGAATCGAATGGAAAGGAATCAAATGGAATGGAAATGAATGGAAACAAAAGGAATAGACTGGAATGGAGTGTAATGGAAAGATATTGAATGGAATGG TR:VR 73:7 24:0 chr2 189523148 r_303 T . PASS END=190945175;SVTYPE=DUP;SVLEN=1422027 TR:VR 78:13 37:0 chr6 122335607 d_1650 G . PASS END=122337832;SVTYPE=DEL;SVLEN=-2225 TR:VR 42:7 24:0 chr6 30690986 r_438 G . PASS END=30727998;SVTYPE=DUP;SVLEN=37012;SVINSLEN=3;SVINSSEQ=GCA TR:VR 93:12 28:0 chr8 92329102 d_1853 T . Too_small_size END=92329137;SVTYPE=DEL;SVLEN=-35 TR:VR 88:29 11:0 chrX 1408259 d_2029 T . PASS END=1409563;SVTYPE=DEL;SVLEN=-1304;SVINSLEN=44;SVINSSEQ=GACAACACTGCCCTCCAGCCAAATGCTGGTACTCCCAAATACTC TR:VR 27:4 16:0 chr10 129987913 d_273 C . Too_small_size END=129987954;SVTYPE=DEL;SVLEN=-41 TR:VR 35:4 16:0 chr12 4355674 d_338 A . PASS END=4355729;SVTYPE=DEL;SVLEN=-55 TR:VR 21:12 16:0 chr14 103414969 d_453 T . PASS END=103415860;SVTYPE=DEL;SVLEN=-891 TR:VR 21:13 15:0 chr17_KI270730v1_random 62312 i_431 T . Too_small_size END=62312;SVTYPE=INS;SVINSLEN=36;SVINSSEQ=TTGAATGTAATTGATTCAAACGGAATGGAATTGAAT TR:VR 75:4 24:0 chr2 190120501 r_304 T . PASS END=190144615;SVTYPE=DUP;SVLEN=24114 TR:VR 102:18 36:0 chr20 48848902 d_1189 A . Too_small_size END=48848941;SVTYPE=DEL;SVLEN=-39 TR:VR 54:11 22:0 chr3 173648554 d_1368 A . PASS END=173648668;SVTYPE=DEL;SVLEN=-114 TR:VR 51:11 15:0 chr3 89219198 d_1335 T . PASS END=89219743;SVTYPE=DEL;SVLEN=-545 TR:VR 22:13 19:0 chr6 122931645 d_1651 A . PASS END=122931708;SVTYPE=DEL;SVLEN=-63 TR:VR 28:12 16:0 chr6 736286 r_421 A . PASS END=763079;SVTYPE=DEL;SVLEN=-26793 TR:VR 66:15 31:0 chr7 149725172 d_1776 G . PASS END=149725221;SVTYPE=DEL;SVLEN=-49 TR:VR 47:12 19:0 chr8 144625732 d_1887 G . Too_small_size END=144625722;SVTYPE=INS;SVINSLEN=42;SVINSSEQ=GCGGCCCGGTTCACGGAGCACCCACTGCACACTGCGGCAGCC TR:VR 49:3 8:0 chrX 5714066 i_1492 A . PASS END=5714066;SVTYPE=INS;SVINSLEN=206;SVINSSEQ=AAATGGCCATACTGCCTAAAGTAATTTATAGATTCAGTGCTATCCCCATCAAGCTACCATTGATTTTCTTCACAGAATTAGAAACCTCTTCAAGGAGAACCACAAACCACTGCTCAAGGAAATAAGAGAGGACACAAACAAATGGCAAAACATTCCATGCTCATGGATAGGAAGAATCAATATTGTGAAAATGGCCATACTGCCTA TR:VR 43:4 17:0 chr1 32601337 r_10 G . PASS END=35396399;SVTYPE=DUP;SVLEN=2795062 TR:VR 99:19 34:0 chr12 101909791 d_386 T . Too_small_size END=101909836;SVTYPE=DEL;SVLEN=-45 TR:VR 52:26 18:0 chr17_KI270730v1_random 63723 d_833 G . PASS END=63719;SVTYPE=INS;SVINSLEN=146;SVINSSEQ=GAATGGACTCAAATTGAATGGAAACGAATGGAATAGAATGGAATGGAATGCAATGGAATAGAAAGGAATAGAATGGAATGGATTTGGATGGAAAGGAATGGAATGGAATTGAGACGAATGGAATATAATAGAATGGAATAGATTCG TR:VR 82:5 26:0 chr18 78663211 d_878 G . PASS END=78663300;SVTYPE=DEL;SVLEN=-89 TR:VR 34:6 18:0 chr2 102858299 r_286 A . PASS END=102862991;SVTYPE=DEL;SVLEN=-4692 TR:VR 55:24 19:0 chr2 191852824 d_1102 T . PASS END=191852882;SVTYPE=DEL;SVLEN=-58;SVINSLEN=11;SVINSSEQ=TGTTGTATGTG TR:VR 36:11 20:0 chr4 185508080 r_394 A . PASS END=185608185;SVTYPE=DUP;SVLEN=100105;SVINSLEN=53;SVINSSEQ=AATAAATCCTTAGTATTTTAAAAAAAAAAAAAGCTTTTCACATAGCTTTCTTT TR:VR 61:8 29:0 chr7 150242152 d_1777 G . PASS END=150242228;SVTYPE=DEL;SVLEN=-76;SVINSLEN=4;SVINSSEQ=ACCC TR:VR 73:12 15:0 chr8 145072944 i_1358 T . PASS END=145072959;SVTYPE=INS;SVINSLEN=72;SVINSSEQ=GCTGGGTCAAATGGTATTTCTGGTTCTATATCTTTGAGGAATTTTCACACTGTCTTCCACAATGACTGAAGT TR:VR 53:5 17:0 chr1 226780440 r_47 G . PASS END=228167007;SVTYPE=DUP;SVLEN=1386567 TR:VR 107:25 27:0 chr1 32732732 i_23 G . PASS END=32732732;SVTYPE=INS;SVINSLEN=162;SVINSSEQ=GTGTGAGCCACCGTGCCAGGCCAAATGTTAGCTTTTATTATTATTTTCTCTGCAAAATTTGTCTATTTCTGGACTCTGAATTGAAGATTTGGGAAAATAGCCAGCACATTGACGTATTTCTGTGAAGCCCTCTAAAGTTCCCACCTCTGCTGGGTGCATGAT TR:VR 58:15 15:0 chr10 130378642 d_274 G . PASS END=130378853;SVTYPE=DEL;SVLEN=-211 TR:VR 35:9 24:0 chr14 104733297 r_167 G . PASS END=104756540;SVTYPE=DUP;SVLEN=23243 TR:VR 64:12 20:0 chr15 79554532 r_190 C . PASS END=79585269;SVTYPE=DUP;SVLEN=30737 TR:VR 60:4 33:0 chr2 194442178 r_305 A . PASS END=195459479;SVTYPE=DUP;SVLEN=1017301 TR:VR 81:15 20:0 chr3 180143228 d_1369 C . PASS END=180143298;SVTYPE=DEL;SVLEN=-70;SVINSLEN=3;SVINSSEQ=CTG TR:VR 35:28 12:0 chr4 72400735 i_972 T . PASS END=72400735;SVTYPE=INS;SVINSLEN=91;SVINSSEQ=ACGTGTGCATAGATATACACACGGTGTGTATATATACGTGTGTATAGATATACACACGGTGTGTATATATACGTGTGCATAGATATACACA TR:VR 52:4 18:0 chr5 140494377 d_1582 C . PASS END=140494714;SVTYPE=DEL;SVLEN=-337 TR:VR 23:9 14:0 chr6 128222584 r_451 T . PASS END=128246029;SVTYPE=DUP;SVLEN=23445 TR:VR 53:3 30:0 chr7 150372208 d_1778 G . PASS END=150372289;SVTYPE=DEL;SVLEN=-81 TR:VR 62:16 16:0 chr8 19073268 d_1829 T . PASS END=19074459;SVTYPE=DEL;SVLEN=-1191 TR:VR 14:3 11:0 chr8 93968325 d_1856 C . PASS END=93968439;SVTYPE=DEL;SVLEN=-114 TR:VR 88:5 17:0 chr9 42323329 r_522_0 T [chr9:42328604[G . PASS SVTYPE=BND;MATEID=r_522_1 TR:VR 23:12 14:0 chr9 42328604 r_522_1 G [chr9:42323329[G . PASS SVTYPE=BND;MATEID=r_522_0 TR:VR 23:12 14:0 chr1 34977873 d_19 C . PASS END=34978514;SVTYPE=DEL;SVLEN=-641 TR:VR 58:19 15:0 chr11 18548947 d_296 G . Too_small_size END=18548982;SVTYPE=DEL;SVLEN=-35 TR:VR 44:17 15:0 chr12 103397874 d_387 A . PASS END=103398955;SVTYPE=DEL;SVLEN=-1081 TR:VR 57:5 24:0 chr12 44020705 r_116 G . PASS END=44025713;SVTYPE=DUP;SVLEN=5008 TR:VR 38:5 26:0 chr15 80693296 d_602 T . PASS END=80693360;SVTYPE=DEL;SVLEN=-64 TR:VR 29:7 14:0 chr2 103204863 r_287 A . PASS END=103239030;SVTYPE=DEL;SVLEN=-34167 TR:VR 65:10 28:0 chr6 8397337 r_423 A . PASS END=17451526;SVTYPE=DEL;SVLEN=-9054189 TR:VR 133:11 29:0 chr8 94683005 d_1857 C . PASS END=94683083;SVTYPE=DEL;SVLEN=-78 TR:VR 65:8 17:0 chr1 226964002 d_188 C . PASS END=226964669;SVTYPE=DEL;SVLEN=-667;SVINSLEN=3;SVINSSEQ=TTG TR:VR 59:6 18:0 chr1 35801950 d_20 A . PASS END=35802000;SVTYPE=DEL;SVLEN=-50 TR:VR 27:9 14:0 chr10 130994621 d_275 A . Too_small_size END=130994664;SVTYPE=DEL;SVLEN=-43 TR:VR 43:5 14:0 chr11 18578071 d_297 T . PASS END=18578129;SVTYPE=DEL;SVLEN=-58 TR:VR 37:14 4:0 chr12 44186099 d_362 A . PASS END=44188781;SVTYPE=DEL;SVLEN=-2682 TR:VR 37:13 21:0 chr15 80693551 d_603 T . PASS END=80693598;SVTYPE=DEL;SVLEN=-47 TR:VR 29:7 14:0 chr2 195242205 d_1103 G . Too_small_size END=195242243;SVTYPE=DEL;SVLEN=-38 TR:VR 47:9 10:0 chr2 38976852 r_273_0 G G]chr2:47178749] . PASS SVTYPE=BND;MATEID=r_273_1 TR:VR 61:7 44:0 chr2 47178749 r_273_1 A A]chr2:38976852] . PASS SVTYPE=BND;MATEID=r_273_0 TR:VR 61:7 44:0 chr4 74104317 r_383 C . PASS END=74167747;SVTYPE=DUP;SVLEN=63430 TR:VR 105:19 37:0 chr5 142332977 r_415 C . PASS END=142386252;SVTYPE=DUP;SVLEN=53275;SVINSLEN=4;SVINSSEQ=CCTA TR:VR 58:11 31:0 chr6 130244466 d_1652 T . Too_small_size END=130244506;SVTYPE=DEL;SVLEN=-40 TR:VR 39:25 16:0 chr6 8409423 d_1612 A . PASS END=8409613;SVTYPE=DEL;SVLEN=-190 TR:VR 52:38 16:0 chr8 103706093 d_1861 T . PASS END=103706312;SVTYPE=DEL;SVLEN=-219 TR:VR 114:25 19:0 chr11 20750254 d_298 A . Too_small_size END=20750297;SVTYPE=DEL;SVLEN=-43 TR:VR 41:21 15:0 chr15 101935020 r_199_0 T T]chr7:20921132] . PASS SVTYPE=BND;MATEID=r_199_1 TR:VR 102:14 46:0 chr7 20921132 r_199_1 T T]chr15:101935020] . PASS SVTYPE=BND;MATEID=r_199_0 TR:VR 102:14 46:0 chr15 80710013 r_191 A . PASS END=80726272;SVTYPE=DUP;SVLEN=16259 TR:VR 48:9 21:0 chr2 195937490 d_1104 A . PASS END=195941007;SVTYPE=DEL;SVLEN=-3517 TR:VR 42:10 20:0 chr2 38976853 r_274_0 A [chr2:47178748[C . PASS SVTYPE=BND;MATEID=r_274_1 TR:VR 61:11 44:0 chr2 47178748 r_274_1 C [chr2:38976853[C . PASS SVTYPE=BND;MATEID=r_274_0 TR:VR 61:11 44:0 chr20 49934229 r_333_0 C C]chr4:1831899] . PASS SVTYPE=BND;MATEID=r_333_1 TR:VR 68:15 31:0 chr4 1831899 r_333_1 G G]chr20:49934229] . PASS SVTYPE=BND;MATEID=r_333_0 TR:VR 68:15 31:0 chr22 16156035 d_1273 T . PASS END=16157709;SVTYPE=DEL;SVLEN=-1674 TR:VR 27:18 18:0 chr3 18761321 r_358 A . PASS END=18787940;SVTYPE=DEL;SVLEN=-26619 TR:VR 36:14 23:0 chr6 9022316 r_424_0 A A]chr6:9022952] . PASS SVTYPE=BND;MATEID=r_424_1 TR:VR 50:6 18:0 chr6 9022952 r_424_1 T T]chr6:9022316] . PASS SVTYPE=BND;MATEID=r_424_0 TR:VR 50:6 18:0 chr7 151074943 r_485 T . Too_low_VAF END=151111437;SVTYPE=DEL;SVLEN=-36494 TR:VR 113:3 21:0 chr8 103854886 d_1862 G . PASS END=103855367;SVTYPE=DEL;SVLEN=-481 TR:VR 99:18 17:0 chrX 6533238 i_1494 C . PASS END=6533238;SVTYPE=INS;SVINSLEN=1854;SVINSSEQ=TCCCCACACACCACCTCTTCCCCCCTCCCTCCCTCCCCCCACACACCACCTCTTCCTCCCTCCCTCCCTCCCTCCCCACACACCACCTCTTCCCCCCTCCCTCCCTCCCCACACACCACCTCTTCCTCCCTCCCTCCCTCCCTCCCCACACACCACCTCTTCCTCCCTCCCTCCCTCCCCACACACACCACCTCTTCCTCCCTCCCTCCCCACACACCACCCTCTTCCTCCCTCCCTCCCTCCCCACACACCACCCCTCTTCCTCCCTCCCTCCCCTCCCCACACACCTCCTCTTCCTCCCTCCCTCCCCACACCACCTCCTCTTTCCCTCCCTCCCTCCCCACACACCTCCTCTCCCTCCCTCCCTCCCTCCCCCCACACACCTCCTCTTCCTCCCTCCCTCCCTCCCCACACACCACCTCTTCCTCCCTCCCTCCCCACACACCTCCTCTTCCACCCTCCCTCCCCACACACCTCCCTCCTCTTCCTCCCTCCCTCCCCACACACCACCTCTTCCCTCCCTCCCTCCCTCCCCACACACCTCCTCTCCCTCCCTCCCTCCCTCCCCACACACCTCCTCTTCCTCCTCCCTCCCTCCCCACACACCTCCTCTTCCTCCCTCCCTCCCCACACACCTCCTCTTCCTCCCTCCCTCCCCACACACCTCCTCTTCCTCCCTCCCTCCCTCCCCACACACCACCTCTTCCTCCCTCCCTCCCTCCCCACACACCTCCTCTTCCTCCCTCCCTCCCCACACACCTCCTCTCCCTCCCCCTCCCTCCCTCCCCACACACCACCTCTTCCTCCCTCCCTCCCTCCCCACACACCTCCTCTCCCTCCCTCCCTCCCTCCCCACACACCTCCTCTCCCTCCCTCCCTCCCTCCCCCACACCTCCTCTTCCCTCCCTCCCTCCCCACACACCTCCTCTCCCTCCCTCCCTCCCCACACACCTCTTCCTCCCTCCCTCCCTCCCCACACACCACCTCTTCCTCCCTCCCTCCCTCCCCACACACCACCTCTTCCTCCCTCCCTCCCCTCCCCACACACCTCCTCTCCCTCCCTCCCTCCCTCCCCACACACCTCCTCTTCCTCCCTCCCTCCCTCCCCACACACCTCCTCTTCCTCCCTCCCTCCCCACACACCTCCTCTTCCTCCCTCCCTCCCCACACACCTCCTCTTCCTCCCTCCCTCCCTCCCCACACACCACCTCTTCCTCCCTCCCTCCCTCCCCACACACCTCCTCTTCCTCCCTCCCTCCCCACACACCTCCTCTCCCTCCCTCCCTCCCTCCCCACACACCACCTCTTCCTCCCCTCCTCCCCACACACCACCTCTTCCTCCCTCCCTCCCCTCCCCACACACCACCTCTTCCTCCCTCCCTCCCCACACACCTCCTCTCCCTCCCTCCCTCCCTCCCCACACACCTCCTCTCCCTCCCTCCCTCCCTCCCCACACACCTCCTCTTCCTCCCTCCCTCCCCACACACCTCCTCTCCCTCCCTCCCTCCCCACACACCTCTTCCTCCCTCCCTCCCTCCCCACACACCACCTCTTCCTCCCTCCCTCCCTCCCCACACACTTCTTCCTCCCTCCCTCCCCACACACCACCTCTTCCTCCCTCCCTCCCTCCCCACACACCTCTTCCTCCCTCCCTCCCTCCCCCCACACACCACCTCTTCCTCCCTCCCTCCCTCCCCACACACCTCTTCCTCCCTCCCTCCCTCCCTCCCCACACACCACCTCTTCCTCCCTCCCTCCCTCCCCACACACCTCTTCCTCCCTCCCTCCCTCCCCACACACCACCTCTTCTCCCTCCCTCCCTCCCCACACACCTCTCCCTCCCTCCCTCCTCAC TR:VR 50:7 14:0 chr1 227758005 r_48 C . PASS END=227761568;SVTYPE=DUP;SVLEN=3563 TR:VR 67:6 26:0 chr12 106838685 d_388 T . PASS END=106838736;SVTYPE=DEL;SVLEN=-51 TR:VR 46:10 13:0 chr15 81596311 r_192 T . PASS END=81601992;SVTYPE=DUP;SVLEN=5681 TR:VR 33:4 22:0 chr16 87738936 i_344 C . PASS END=87738936;SVTYPE=INS;SVINSLEN=1690;SVINSSEQ=CCACACACCAGCACCTCATCCACACACCAGCACCTCATCCATCCACACACCAGCACCTCATCCATCCACACACCAGCACCTCATCCATCCACACACCAGCATCTCATCCATCCACACACCAGCACCTCATCCATCCACACACCAGCACCTCATCCACCCACACACCAGCACCTCATCCATCCACACACCAGCACCTCATCCACCCACACACCAGCACCTCATCCATCCCACACACCAGCACCTCATCCACACACCAGCACCTCATCCATCACACACCAGCACCTCATCCATCCACACACCAGCACCTCATCCACCCACACACCAGCACCTCATCCACCCACACACCAGCACCTCATCCACACACCAGCACCTCATCCATCCACACACCAGCACCTCATCCACCCACACACCAGCACCTCATCCACCCACACACCAGCACCTCATCCACACACCAGCACCTCATCCATCCACACACCAGCACCTCATCCATCCACACACCAGCACCTCATCCATCCACACACCAGCATCTCATCCATCCACACACCAGCACCTCATCCATCCACACACCAGCACCTCATCCACCCACACACCAGCACCTCATCCACCCACACACCAGCACCTCATCCATCCACACACCAGCACCTCATCCATCCACACACCAGCATCCCATCCATCCACACACCAGCACCTCATCCATCCACACACCAGTATCTCATCCACACACCAGCACCTCATCCATCCACACACCAGCACCTCATCCATCCACACACCAGCACCTCATCCATCCACACACCAGCACCTCATCCATCCACACACCAGCACCTCATCCATCCACACACCAGCACCTCATCCACCCACACACCAGCACCTCATCCATCCACACACCAGCACCTCATCCATCCACACACCAGCACCTCATCCATCCACACACCAGCACCTCATCCACCCACACACCAGCACCTCATCCATCCACACACCAGCACCTCATCCATCCACACACCAGCATCTCATCCATCCACACACCAGCACCTCATCCATCACACACCAGCACCTCATCCATCCACACACCAGCACCTCATCCATCCACACACCAGCACCTCATCCATCCACACACCAGCATCTCATCCACACACCAGCACCTCATCCATCCACACACCAGCATCTCATCCACACACCAGCACCTCATCCATCCACACACCAGCACCTCATCCATCCACACACCAGCACCTCATCCATCCACACACCAGCATCTCATCCATCCACACACCAGCACCTCATCCATCCACACACCAGCACCTCATCCACCCACACACCAGCACCTCATCCATCCACACACCAGCACCTCATCCACCCACACACCAGCACCTCATCCATCCACACACCAGCACCCTCATCCACACACCAGCACCTCATCCATCCACACACCAGCACCTCATCCATCCACACACCAGCACCTCATCCACCCACACACCAGCACCTCATCCATCCACACACCAGCACCTCATCCATCCACACACCAGCATCTCATCCATCCACACACCAGCACCTCATCCATCCACACACCAGCACCTCATCCACCCACACACCAGCACCTCATCCATCCACACACCAGCACCTCATCCACCCACACACCAGCACCTCATCCATCCACACACCAGCACCTCATCCACACACCAGCACCTCATCCATC TR:VR 48:3 20:0 chr2 105756360 d_1074 T . Too_small_size END=105756400;SVTYPE=DEL;SVLEN=-40 TR:VR 30:5 17:0 chr2 202830608 d_1105 G . PASS END=202830670;SVTYPE=DEL;SVLEN=-62 TR:VR 49:6 17:0 chr20 56781856 d_1190 C . PASS END=56782441;SVTYPE=DEL;SVLEN=-585 TR:VR 23:11 16:0 chr21 34565544 r_343 C . PASS END=34580305;SVTYPE=DUP;SVLEN=14761 TR:VR 53:8 20:0 chr3 187756562 d_1371 G . PASS END=187756723;SVTYPE=DEL;SVLEN=-161 TR:VR 39:14 26:0 chr6 132712246 d_1653 T . PASS END=132719330;SVTYPE=DEL;SVLEN=-7084 TR:VR 26:16 24:0 chr7 151077047 d_1779 G . Too_small_size END=151077093;SVTYPE=DEL;SVLEN=-46 TR:VR 53:7 11:0 chr8 105465910 d_1863 C . PASS END=105470970;SVTYPE=DEL;SVLEN=-5060 TR:VR 115:7 12:0 chrUn_KI270442v1 96773 i_1438 T . PASS END=96834;SVTYPE=INS;SVINSLEN=513;SVINSSEQ=ATCTTCACATAAAAACTAGACGGAAGCATTCTCAGAAACTTCTTTGTGATGTTTGAATTCAACTCACAGAGTTGAAGCATACCTATTGATAGAGCAGTTTTGAAACACTCTTTTTGTAGAATCTGCAAGTGGATATTTGGACTGCTTTGAGGCCTACGTTGGAAAAGGGAATATCTTCACATAAAAATCTAGAAAGAAGAATTCTCAGAAACTTCTTTGTGATGGTTTGCATTCAACTCAGAGAGTTGAACATTTCTTTTCATAGAGCAGTTTTGAAACAGTCTTTTCGTAGAATCTGCAAGTGGATATTTGGAATGCTTTGAGGCCTTCATTGGAAATGAGAATATCTTCACATAAAAACGAGACAGAAGCATTCTCAGAAACTACTTTGTGATGTTTGCATTCAACTCAGAGATGTTAACCTTTATAGCGCAGTTTTGATAGAACAGTTTTGAAACACTGTTTTTGTATTTGGATCTGCAAGTGGTCATTTGGAGAGCTTTGAGGCCTATG TR:VR 160:12 67:1 chrX 65601646 d_2056 G . PASS END=65601791;SVTYPE=DEL;SVLEN=-145 TR:VR 52:13 20:0 chr12 108291660 d_389 T . PASS END=108291859;SVTYPE=DEL;SVLEN=-199 TR:VR 52:18 17:0 chr2 107434729 d_1075 T . PASS END=107435360;SVTYPE=DEL;SVLEN=-631 TR:VR 37:11 19:0 chr2 203328691 d_1106 C . PASS END=203328744;SVTYPE=DEL;SVLEN=-53 TR:VR 40:7 10:0 chr2 89014611 r_283_0 A [chr2:89848038[A . PASS SVTYPE=BND;MATEID=r_283_1 TR:VR 155:14 38:0 chr2 89848038 r_283_1 A [chr2:89014611[A . PASS SVTYPE=BND;MATEID=r_283_0 TR:VR 155:14 38:0 chr21 35511365 d_1254 G . PASS END=35511421;SVTYPE=DEL;SVLEN=-56 TR:VR 38:11 13:0 chr4 49167106 i_954 G . Too_low_VAF END=49167106;SVTYPE=INS;SVINSLEN=357;SVINSSEQ=TTTTTGGTTTCTGGTTTAGCAGGTCACTCCCATTGTTTTGGGTTTCTGGTTTAGCAGGTCACTCCCATTGTTTTCGGTTTCTGGTTTAGCAAGGACACTCCCATTGTTTTAGGTCCTGCTTGCTAACATCACTCCCATTGTTTTCATTTCCGGTTTTAGCACATCACTCCCATTGTTTTGGGTTCCGGTTTTAGCAAGTCACTCCCATTGTTTTGGGTTTCTGGTTTAGCACGTCACTCCCATTGTTTTGGGTTCTGGTTTTAGTGCACGTCAATCCCATTGATTTTGGGTTCCAGTTTTTTAGCACATCACTTCCATTGTTTTGGGTTTTTGGTTTAGCATGTTACTCCCATTGTT TR:VR 119:3 46:0 chr5 145769368 r_416 A . PASS END=146093960;SVTYPE=DUP;SVLEN=324592 TR:VR 64:15 37:0 chr6 9022322 r_425_0 G [chr6:10869387[T . PASS SVTYPE=BND;MATEID=r_425_1 TR:VR 93:6 33:0 chr6 10869387 r_425_1 T [chr6:9022322[T . PASS SVTYPE=BND;MATEID=r_425_0 TR:VR 93:6 33:0 chr7 151151928 r_486 A . PASS END=151891694;SVTYPE=DUP;SVLEN=739766 TR:VR 153:19 34:0 chr7 158335327 d_1802 C . PASS END=158335495;SVTYPE=DEL;SVLEN=-168;SVINSLEN=75;SVINSSEQ=TCTCACCATAAGAGGTGACACCTGCAGACGTCACTCACACCGACACTCTCACCATAGGAGGTGACACTTGCAGAC TR:VR 78:6 20:0 chr7 23487294 d_1710 T . PASS END=23487369;SVTYPE=DEL;SVLEN=-75 TR:VR 43:10 12:0 chr8 106417056 d_1864 G . PASS END=106418508;SVTYPE=DEL;SVLEN=-1452 TR:VR 95:13 21:0 chr8 28889532 d_1831 T . Too_small_size END=28889571;SVTYPE=DEL;SVLEN=-39 TR:VR 21:12 15:0 chr8 98384678 d_1858 C . Too_small_size END=98384718;SVTYPE=DEL;SVLEN=-40 TR:VR 115:9 15:0 chr9 4387131 r_514 T . PASS END=4400864;SVTYPE=DUP;SVLEN=13733 TR:VR 62:10 34:0 chr1 144804548 d_168 T . Too_small_size END=144804591;SVTYPE=DEL;SVLEN=-43 TR:VR 70:4 33:0 chr11 28194175 i_135 T . Too_small_size END=28194175;SVTYPE=INS;SVINSLEN=42;SVINSSEQ=CTTTCTTTCTTTCTTTCTTTCTTTCTCTCTCTCTCTCTCTCT TR:VR 44:3 12:0 chr12 108393929 r_135_0 T T[chr8:57671861[ . PASS SVTYPE=BND;MATEID=r_135_1 TR:VR 99:19 34:0 chr8 57671861 r_135_1 T ]chr12:108393929]T . PASS SVTYPE=BND;MATEID=r_135_0 TR:VR 99:19 34:0 chr14 106206382 i_237 T . PASS END=106206382;SVTYPE=INS;SVINSLEN=263;SVINSSEQ=CGTCAGGGCCGCTCCCCTCTCACCCCGGAAACGAAGTCACATCCGACCTACCTGACCCCGGGGTCAGAAGCTGAGGACTCAGCGCCCTCGTCAGGGCCGCTCCCTCTCACCGGAAACGAAGTCACATCCGACCTACCTGACCCCGGGGTCAGAAGCTGAGGACTCAGTGCCCTCGTCAGAGCCGCTCCCCTCTCACCGGAAACGAAGTCACATCCGACCTACCTGACGGCCCCGGGGTCAGGGCTGAGGACTCAGCGCGCCCC TR:VR 30:3 12:0 chr15 82017125 r_193 A . PASS END=83220694;SVTYPE=DUP;SVLEN=1203569 TR:VR 54:6 33:0 chr18 79042523 d_880 C . PASS END=79043395;SVTYPE=DEL;SVLEN=-872;SVINSLEN=27;SVINSSEQ=CCCCACCCCAACCCTCACCGCATCCTC TR:VR 32:12 15:0 chr2 108258354 d_1076 A . Too_small_size END=108258389;SVTYPE=DEL;SVLEN=-35 TR:VR 27:11 21:0 chr2 42564019 d_938 T . PASS END=42564115;SVTYPE=DEL;SVLEN=-96 TR:VR 46:8 12:0 chr2 89784291 d_967 C . PASS END=89784287;SVTYPE=INS;SVINSLEN=218;SVINSSEQ=CATTCGATGATTCCATTCGATTCCATTCAACTACGGTTCCATTCGATTCCATTCGATGATGATTCCATTCGATTCAATGTGATGATTCCATTCGATTCCATTCTATTATTCCATTTCATTAAATGCGATCCGATGTTGAATCTACTCAATTCCATTCGATGATTCCAATCGATTGCATTCGATGATGATTGCATTAATTCCATTTGATGATTCTTTTG TR:VR 86:5 32:0 chr20 58079594 r_334_0 T [chr4:83931759[C . PASS SVTYPE=BND;MATEID=r_334_1 TR:VR 104:31 33:0 chr4 83931759 r_334_1 C [chr20:58079594[C . PASS SVTYPE=BND;MATEID=r_334_0 TR:VR 104:31 33:0 chr21 35861510 d_1255 G . PASS END=35861831;SVTYPE=DEL;SVLEN=-321 TR:VR 35:17 19:0 chr4 49261675 r_381_0 A [chr6:118636355[C . PASS SVTYPE=BND;MATEID=r_381_1 TR:VR 130:9 74:0 chr6 118636355 r_381_1 C [chr4:49261675[C . PASS SVTYPE=BND;MATEID=r_381_0 TR:VR 130:9 74:0 chr6 135732023 d_1654 T . Too_small_size END=135732069;SVTYPE=DEL;SVLEN=-46 TR:VR 26:11 13:0 chr8 107258437 d_1865 G . PASS END=107259746;SVTYPE=DEL;SVLEN=-1309 TR:VR 98:12 18:0 chr9 5909935 r_515 A . Too_low_VAF END=5982407;SVTYPE=DUP;SVLEN=72472 TR:VR 65:3 32:0 chrY 11329276 r_558_0 A AGCCTAGACAAAAGTCCTATCACCTGGGTGATCGTGTGTGACAGATGGAGACCCTGTTGAAATAAAGGAGTGGAATGGAAGGGATTGGTATGGAATGGAATGGATAGGAGTGGAGTGAAGTGGAATTGAGTGGAGTGGAGTGGAGTGCAGTGGAATGGAATGGAATGGAATGGAATGGTGAAATTATGGGT]chrY:56834898] . Too_low_VAF SVTYPE=BND;MATEID=r_558_1;SVINSLEN=190;SVINSSEQ=GCCTAGACAAAAGTCCTATCACCTGGGTGATCGTGTGTGACAGATGGAGACCCTGTTGAAATAAAGGAGTGGAATGGAAGGGATTGGTATGGAATGGAATGGATAGGAGTGGAGTGAAGTGGAATTGAGTGGAGTGGAGTGGAGTGCAGTGGAATGGAATGGAATGGAATGGAATGGTGAAATTATGGGT TR:VR 803:3 571:0 chrY 56834898 r_558_1 A AACCCATAATTTCACCATTCCATTCCATTCCATTCCATTCCACTGCACTCCACTCCACTCCACTCAATTCCACTTCACTCCACTCCTATCCATTCCATTCCATACCAATCCCTTCCATTCCACTCCTTTATTTCAACAGGGTCTCCATCTGTCACACACGATCACCCAGGTGATAGGACTTTTGTCTAGGC]chrY:11329276] . Too_low_VAF SVTYPE=BND;MATEID=r_558_0;SVINSLEN=190;SVINSSEQ=ACCCATAATTTCACCATTCCATTCCATTCCATTCCATTCCACTGCACTCCACTCCACTCCACTCAATTCCACTTCACTCCACTCCTATCCATTCCATTCCATACCAATCCCTTCCATTCCACTCCTTTATTTCAACAGGGTCTCCATCTGTCACACACGATCACCCAGGTGATAGGACTTTTGTCTAGGC TR:VR 803:3 571:0 chr1 233540028 d_189 A . PASS END=233541232;SVTYPE=DEL;SVLEN=-1204 TR:VR 31:15 25:0 chr12 108939907 d_390 G . Too_small_size END=108939950;SVTYPE=DEL;SVLEN=-43 TR:VR 21:14 14:0 chr12 47074083 r_117_0 A ]chr4:41351493]A . PASS SVTYPE=BND;MATEID=r_117_1 TR:VR 92:11 49:0 chr4 41351493 r_117_1 A A[chr12:47074083[ . PASS SVTYPE=BND;MATEID=r_117_0 TR:VR 92:11 49:0 chr15 82196691 d_605 A . PASS END=82196821;SVTYPE=DEL;SVLEN=-130 TR:VR 33:3 20:0 chr17 26828175 d_769 G . PASS END=26828166;SVTYPE=INS;SVINSLEN=126;SVINSSEQ=ATTGGAATGCAAAGGAATAGAATAGAATGGAATCGGATGGAAAAGAATGGAATGGAATGGAGTCGATTGGAATAGAATAGAATGGAATGGCATCGAATAGAATGAAATGGAATGGAATGGAATGGA TR:VR 45:12 20:0 chr2 108693293 d_1077 C . Too_small_size END=108693338;SVTYPE=DEL;SVLEN=-45 TR:VR 46:13 19:0 chr2 203781805 d_1107 C . PASS END=203782540;SVTYPE=DEL;SVLEN=-735 TR:VR 37:14 19:0 chr7 151580865 r_488 A . PASS END=151588042;SVTYPE=DUP;SVLEN=7177 TR:VR 114:14 13:0 chr8 108444411 d_1866 T . PASS END=108445469;SVTYPE=DEL;SVLEN=-1058 TR:VR 121:19 16:0 chrX 67320324 i_1510 A . PASS END=67320325;SVTYPE=INS;SVINSLEN=598;SVINSSEQ=GTGGAGTCAGCAGTTTCCTCTGTCCTACAATTTGGCAAAATAATCTCATAAGCACAAGAAGGTTAATATGCTTGCATTAAAAAATGTTAAGTTACTTATAATCCAATTTAAATGTAAGTTCAAATACCTTAACATGTTCACATTACTTTTTTAATTCACAAAAACGTTCTTATCTATCTTTATTTTAAGATGTTTTCCACATACATGCTTAGTGAATTTTCTTTTAGGAGATGTAAGAGAGTCTACAAATCTTTATTCTACTATTTCCCAAAATATACCCAATTACTGGCAAAAATGTTATTATTAAACTGATGAGAAAATATAAAGGTTTATTACTGGATTAAATAAGTTTTTCCATATGCTTGAATTTTTTATACACACAGTATATACTCTATTATATGTATACACAGAATACAACTCTATCAGTATTGAACTTAGTTTGTCATTCCATAAAATGGCCATAGATGGCCAGATCAAGTAATCCTACTCATTTTACCCTGTATTACTGAAAATAAAAATGGGGGGGGGGGCAAATAAAGACTTTAATATCTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG TR:VR 55:4 15:0 chr1 235806465 r_49 G . PASS END=235832041;SVTYPE=DUP;SVLEN=25576;SVINSLEN=18;SVINSSEQ=TAACATGAGTTAACATGA TR:VR 69:9 33:0 chr10 132366121 r_66_0 C ]chr9:98489531]G . Too_low_VAF SVTYPE=BND;MATEID=r_66_1 TR:VR 73:3 35:0 chr9 98489531 r_66_1 G G[chr10:132366121[ . Too_low_VAF SVTYPE=BND;MATEID=r_66_0 TR:VR 73:3 35:0 chr12 11609109 r_108 C . PASS END=11629433;SVTYPE=DEL;SVLEN=-20324 TR:VR 29:16 14:0 chr12 47101331 r_118_0 C C]chr12:47103189] . PASS SVTYPE=BND;MATEID=r_118_1 TR:VR 52:5 15:0 chr12 47103189 r_118_1 T T]chr12:47101331] . PASS SVTYPE=BND;MATEID=r_118_0 TR:VR 52:5 15:0 chr15 83249760 d_606 G . PASS END=83249813;SVTYPE=DEL;SVLEN=-53 TR:VR 32:7 19:0 chr2 109082861 d_1078 T . PASS END=109082952;SVTYPE=DEL;SVLEN=-91 TR:VR 47:9 22:0 chr2 204181278 r_306 C . PASS END=204562449;SVTYPE=DUP;SVLEN=381171 TR:VR 127:28 33:0 chr2 45486255 r_276 G . PASS END=45582245;SVTYPE=DUP;SVLEN=95990 TR:VR 98:16 42:0 chr20 29839041 r_326_0 C ]chrX:42010333]CTACACAGAAGCATTCTGAGAAACATCTCTGTGATGTGTGCATTCATCTCACAGAGTTGAAATTTTCTTTTCATTGAGCAGTTTTGAAACACTCTTTTTGTAGGATCTGCAAGTGGATATTTGGAGTCCCTAGATGAA . Too_low_VAF SVTYPE=BND;MATEID=r_326_1;SVINSLEN=137;SVINSSEQ=CTACACAGAAGCATTCTGAGAAACATCTCTGTGATGTGTGCATTCATCTCACAGAGTTGAAATTTTCTTTTCATTGAGCAGTTTTGAAACACTCTTTTTGTAGGATCTGCAAGTGGATATTTGGAGTCCCTAGATGA TR:VR 100:3 44:1 chrX 42010333 r_326_1 A ATCATCTAGGGACTCCAAATATCCACTTGCAGATCCTACAAAAAGAGTGTTTCAAAACTGCTCAATGAAAAGAAAATTTCAACTCTGTGAGATGAATGCACACATCACAGAGATGTTTCTCAGAATGCTTCTGTGTAG[chr20:29839041[ . Too_low_VAF SVTYPE=BND;MATEID=r_326_0;SVINSLEN=137;SVINSSEQ=TCATCTAGGGACTCCAAATATCCACTTGCAGATCCTACAAAAAGAGTGTTTCAAAACTGCTCAATGAAAAGAAAATTTCAACTCTGTGAGATGAATGCACACATCACAGAGATGTTTCTCAGAATGCTTCTGTGTAG TR:VR 100:3 44:1 chr20 58812141 d_1191 T . Too_small_size END=58812176;SVTYPE=DEL;SVLEN=-35 TR:VR 52:14 22:0 chr5 14635531 i_1044 A . PASS END=14635532;SVTYPE=INS;SVINSLEN=97;SVINSSEQ=CACCCCTATGTAATAAACCACCACAGCACACACACCCCTATGTAATAAACCACCACAGCACACACACACCCTATGTAATAAACCACCACAGCACACA TR:VR 45:5 13:0 chr8 108928881 d_1867 T . PASS END=108928931;SVTYPE=DEL;SVLEN=-50 TR:VR 93:8 24:0 chr8 33338971 r_494 A . PASS END=33345067;SVTYPE=DUP;SVLEN=6096 TR:VR 36:5 20:0 chrX 67785152 i_1511 G . PASS END=67785152;SVTYPE=INS;SVINSLEN=315;SVINSSEQ=GTAAAAATAAGATCTCTGCACCTAGATTGGCTACATTTGAATCCCAACTCAAACACTTTCTGTCTACGTGATCTTGAATAAATTACTTATATTCTCTGTGCCTCAGTTTCTTCATCTACAAAGTGAAGTAATATTATCCACTTTAATATTGCTGTGATAATTAAATGAGGTGATGTATATAAAATGTCTAACATTGTGCCTGAAATATGGTAAGAGCTGAATACATTTTTAGGTATCATTATTACTATTACAGATTTTAAGGGAGTGGGCCTTGTTAGAGCTGATGGAGGAGTGAAGACTATGTCATTTTTTTAC TR:VR 47:22 18:0 chr1 236686435 d_190 C . PASS END=236686516;SVTYPE=DEL;SVLEN=-81 TR:VR 33:12 16:0 chr10 132373506 r_67_0 G G[chr9:98489278[ . PASS SVTYPE=BND;MATEID=r_67_1 TR:VR 67:5 31:0 chr9 98489278 r_67_1 G ]chr10:132373506]G . PASS SVTYPE=BND;MATEID=r_67_0 TR:VR 67:5 31:0 chr12 12119990 d_342 A . Too_small_size END=12120030;SVTYPE=DEL;SVLEN=-40 TR:VR 27:15 17:0 chr17 30217558 d_770 C . PASS END=30217611;SVTYPE=DEL;SVLEN=-53 TR:VR 17:9 15:0 chr2 109396483 d_1079 G . PASS END=109397145;SVTYPE=DEL;SVLEN=-662 TR:VR 32:5 22:0 chr2 204484023 r_307 G . PASS END=204487700;SVTYPE=DEL;SVLEN=-3677 TR:VR 62:35 14:0 chr20 60087826 r_335_0 G GGGGGGAAGCCGAGGCCCGGCGCCGTATCCTGTGGCCGTTTTACCCGCGGGAAAGTCGAGGCCCGGCGCCGTATCCTGCCGCCCGTTTTACCCGCGAGGA]chr6:43925356] . PASS SVTYPE=BND;MATEID=r_335_1;SVINSLEN=99;SVINSSEQ=GGGGGAAGCCGAGGCCCGGCGCCGTATCCTGTGGCCGTTTTACCCGCGGGAAAGTCGAGGCCCGGCGCCGTATCCTGCCGCCCGTTTTACCCGCGAGGA TR:VR 84:5 38:0 chr6 43925356 r_335_1 T TTCCTCGCGGGTAAAACGGGCGGCAGGATACGGCGCCGGGCCTCGACTTTCCCGCGGGTAAAACGGCCACAGGATACGGCGCCGGGCCTCGGCTTCCCCC]chr20:60087826] . PASS SVTYPE=BND;MATEID=r_335_0;SVINSLEN=99;SVINSSEQ=TCCTCGCGGGTAAAACGGGCGGCAGGATACGGCGCCGGGCCTCGACTTTCCCGCGGGTAAAACGGCCACAGGATACGGCGCCGGGCCTCGGCTTCCCCC TR:VR 84:5 38:0 chr3 194080932 r_369 G . PASS END=194088798;SVTYPE=DUP;SVLEN=7866 TR:VR 37:8 30:0 chr4 75754870 d_1469 A . PASS END=75754922;SVTYPE=DEL;SVLEN=-52 TR:VR 58:9 18:0 chr5 15050635 d_1541 T . PASS END=15051736;SVTYPE=DEL;SVLEN=-1101 TR:VR 30:8 21:0 chr6 32288821 d_1621 A . Too_small_size END=32288856;SVTYPE=DEL;SVLEN=-35 TR:VR 47:5 15:0 chr6 9794386 r_426_0 G G]chr8:125859699] . PASS SVTYPE=BND;MATEID=r_426_1 TR:VR 130:12 41:0 chr8 125859699 r_426_1 T T]chr6:9794386] . PASS SVTYPE=BND;MATEID=r_426_0 TR:VR 130:12 41:0 chr7 26925407 r_462 T . PASS END=26948572;SVTYPE=DUP;SVLEN=23165 TR:VR 56:7 34:0 chr8 109097905 d_1868 T . Too_small_size END=109097949;SVTYPE=DEL;SVLEN=-44 TR:VR 127:18 17:0 chrY 11329493 d_2099 T . Too_low_VAF END=11329642;SVTYPE=DEL;SVLEN=-149;SVINSLEN=12;SVINSSEQ=CCCATCACCTGG TR:VR 380:4 208:1 chr1 150878748 d_169 C . PASS END=150879114;SVTYPE=DEL;SVLEN=-366 TR:VR 32:9 19:0 chr11 32366328 d_302 C . PASS END=32366523;SVTYPE=DEL;SVLEN=-195 TR:VR 42:3 13:0 chr12 50593900 i_163 T . PASS END=50593900;SVTYPE=INS;SVINSLEN=62;SVINSSEQ=CCCCTCCCCTCTCCCTCCCCCCCCTCCCCCCCCCCTCCCCTCCCCTCCCCCCCCCCTCTCCC TR:VR 25:3 15:0 chr16 88237151 i_345 G . PASS END=88237151;SVTYPE=INS;SVINSLEN=211;SVINSSEQ=CACCCTCCCTGCCCTCCGTGCTCCTGCCACGCACCTCCCTGCCCTCCTTGCTCCTGCCACGCACACCCCTCCCTGCCCTCCTTGCTCCTGCCACGCACCCTCCCTGGGCCCTCCCGCGTCCTCCCTGCCGTGCTCCTGCCACGCAGACCCTCCCTGCCCTCCGTGCTCCTGCCACGCACCCTCCCTGCCCTCCTTGCTCCTGCCAGTCACG TR:VR 48:3 15:0 chr2 110122226 r_288 G . PASS END=110157376;SVTYPE=DUP;SVLEN=35150 TR:VR 69:6 41:0 chr20 60399414 d_1192 T . Too_small_size END=60399455;SVTYPE=DEL;SVLEN=-41 TR:VR 34:15 27:0 chr3 9506849 d_1325 G . Too_small_size END=9506885;SVTYPE=DEL;SVLEN=-36 TR:VR 40:28 25:0 chr7 100717186 i_1208 G . PASS END=100717186;SVTYPE=INS;SVINSLEN=452;SVINSSEQ=AAGATCCGTGGAGGTGAAGGTCAGGCTGGGGGTCCAGAGGATGGTTAGGGAAACAGGGTCCCCCTTGTTAAAATAAAGCAATTAGTTTAATATATACTGTAGGGAAAGGAGAGAAGGGAAGGAAATTCCCCTTGTCAAATGTCGAGCGTTTTGAATACCGCTTAGAGCAAAAGTAATAAGGCACTCTTCATGAAAAAATTAGCCATATACCACGTCTAAGTGCAAACATGTGTGTTCTTTATGTCTCTAATTCATTTCAACTTCTGTTAACTGGGAATATTTTTATGTGCATTCTCCGTTGTTCCCTTTCTCACTCTAACAAAAATGTGTCAGGGGGCAGGAACGCTGCTCATGGTTGCAAGTACATTTACATACCATAAAATATTTAATGGCTCTTTCTAGTATGGTTAAGCCCCACCAAATGGCTAAACCAACTTTAATTTACAATTCAT TR:VR 48:16 13:0 chr7 152702563 d_1781 C . Too_small_size END=152702608;SVTYPE=DEL;SVLEN=-45 TR:VR 70:13 14:0 chr7 27146188 r_463_0 A [chrX:64324654[C . PASS SVTYPE=BND;MATEID=r_463_1 TR:VR 95:14 45:0 chrX 64324654 r_463_1 C [chr7:27146188[C . PASS SVTYPE=BND;MATEID=r_463_0 TR:VR 95:14 45:0 chr8 110730317 d_1869 T . Too_small_size END=110730358;SVTYPE=DEL;SVLEN=-41 TR:VR 101:7 16:0 chr8 3739720 r_490 T . PASS END=4003907;SVTYPE=DEL;SVLEN=-264187 TR:VR 41:6 26:0 chr9 113041794 d_1904 A . PASS END=113042324;SVTYPE=DEL;SVLEN=-530 TR:VR 31:12 15:0 chr1 151379195 r_30_0 T TGA]chr1:161729796] . PASS SVTYPE=BND;MATEID=r_30_1;SVINSLEN=2;SVINSSEQ=GA TR:VR 72:7 29:0 chr1 161729796 r_30_1 A ATC]chr1:151379195] . PASS SVTYPE=BND;MATEID=r_30_0;SVINSLEN=2;SVINSSEQ=TC TR:VR 72:7 29:0 chr11 32711365 r_75_0 C C]chr4:62476810] . PASS SVTYPE=BND;MATEID=r_75_1 TR:VR 104:22 35:0 chr4 62476810 r_75_1 T T]chr11:32711365] . PASS SVTYPE=BND;MATEID=r_75_0 TR:VR 104:22 35:0 chr12 121838591 d_391 C . PASS END=121838647;SVTYPE=DEL;SVLEN=-56 TR:VR 31:21 8:0 chr12 51986388 d_366 A . PASS END=51992227;SVTYPE=DEL;SVLEN=-5839 TR:VR 24:13 19:0 chr17 34640035 r_234 C . PASS END=34684347;SVTYPE=DUP;SVLEN=44312 TR:VR 57:7 33:0 chr2 110359506 d_1080 G . PASS END=110360726;SVTYPE=DEL;SVLEN=-1220 TR:VR 73:6 23:0 chr2 205434238 r_308 G . PASS END=206475306;SVTYPE=DUP;SVLEN=1041068 TR:VR 122:27 39:0 chr3 95117199 d_1342 T . PASS END=95118926;SVTYPE=DEL;SVLEN=-1727 TR:VR 32:21 21:0 chr5 15430942 d_1542 C . Too_small_size END=15430979;SVTYPE=DEL;SVLEN=-37 TR:VR 41:23 12:0 chr7 153797539 d_1782 A . PASS END=153797836;SVTYPE=DEL;SVLEN=-297 TR:VR 75:19 10:0 chr7 3087895 d_1693 T . PASS END=3088082;SVTYPE=DEL;SVLEN=-187 TR:VR 41:8 12:0 chr8 111913846 i_1330 A . Too_small_size END=111913849;SVTYPE=INS;SVINSLEN=41;SVINSSEQ=TTATTATTATAATAATATAATATAATAATATAATATTATTA TR:VR 102:17 20:0 chr8 4074473 r_491 A . PASS END=4145917;SVTYPE=DEL;SVLEN=-71444 TR:VR 31:8 35:0 chrX 678482 d_2025 C . PASS END=678605;SVTYPE=DEL;SVLEN=-123;SVINSLEN=122;SVINSSEQ=AACAGTGGAACTTCTCCCAGCATTTTGTTCCCAGGTGGAGGGTGTCTGGGAGACGTTTACCTCCTTGTCTCAAACCCCAAACCTCTCCTTTCTACCCCCCAACAGTAGAACAACCAGCTTTT TR:VR 48:4 10:0 chr1 45438607 r_11 A . PASS END=112494090;SVTYPE=DEL;SVLEN=-67055483 TR:VR 57:17 25:0 chr10 132786186 d_279 C . Too_small_size END=132786228;SVTYPE=DEL;SVLEN=-42 TR:VR 48:16 10:0 chr11 32711370 r_76 G . PASS END=81994920;SVTYPE=DUP;SVLEN=49283550 TR:VR 103:14 37:0 chr12 53424348 r_120 A . PASS END=53540576;SVTYPE=DUP;SVLEN=116228 TR:VR 64:19 33:0 chr15 91743158 d_608 C . PASS END=91743230;SVTYPE=DEL;SVLEN=-72 TR:VR 37:9 32:0 chr17 35698335 r_235 A . PASS END=35701181;SVTYPE=DUP;SVLEN=2846 TR:VR 41:9 18:0 chr4 76615049 r_384 T . PASS END=76634489;SVTYPE=DUP;SVLEN=19440 TR:VR 76:11 34:0 chr5 154583509 i_1068 A . Too_small_size END=154583510;SVTYPE=INS;SVINSLEN=40;SVINSSEQ=AAGAAAAGAAAAGAAAAGAAAAGAAAAAGAATGTAGAGGA TR:VR 36:3 8:0 chr7 31374357 r_464_0 T T]chr7:31385839] . PASS SVTYPE=BND;MATEID=r_464_1 TR:VR 74:13 23:0 chr7 31385839 r_464_1 G G]chr7:31374357] . PASS SVTYPE=BND;MATEID=r_464_0 TR:VR 74:13 23:0 chr8 112064411 d_1870 T . PASS END=112064571;SVTYPE=DEL;SVLEN=-160 TR:VR 111:10 16:0 chr8 40801002 d_1833 A . PASS END=40801051;SVTYPE=DEL;SVLEN=-49 TR:VR 26:3 20:0 chr9 122414241 d_1905 A . PASS END=122414288;SVTYPE=DEL;SVLEN=-47 TR:VR 32:10 15:0 chrY 26645253 i_1538 A . PASS END=26645253;SVTYPE=INS;SVINSLEN=265;SVINSSEQ=AGTGGGGGAATGGAATTAAAACTAGTGGAGTGCACTGGAGTGGAGTGGATTGGTGTGGAGTGGAATGGAGTGGAGAACAGTGGAGTGGAATGGAGTGGAGTGGAATGGAGTGGAGTGGAATGGAGTGGCTTGGAGTGGGGTGTAGTAGAGTGGAATGGAATGGAATGGAATGGTATCGCATGGAATCACACGCAATCGCATGTAATCAAATAGAATCGAATGGAATCGAATGCAGAAAATCGAATCAAATGTAATGCGGTGGAGT TR:VR 21:9 5:0 chr1 45608583 r_12 G . PASS END=45804119;SVTYPE=DUP;SVLEN=195536 TR:VR 58:12 30:0 chr11 33752448 r_77_0 T T[chr19:11320195[ . PASS SVTYPE=BND;MATEID=r_77_1 TR:VR 64:13 31:0 chr19 11320195 r_77_1 C ]chr11:33752448]C . PASS SVTYPE=BND;MATEID=r_77_0 TR:VR 64:13 31:0 chr12 54366635 d_367 G . PASS END=54367475;SVTYPE=DEL;SVLEN=-840 TR:VR 17:7 14:0 chr13 21042422 d_398 G . PASS END=21042636;SVTYPE=DEL;SVLEN=-214 TR:VR 30:10 14:0 chr15 92439662 r_194_0 T ]chr4:182730733]T . PASS SVTYPE=BND;MATEID=r_194_1 TR:VR 61:17 32:0 chr4 182730733 r_194_1 T T[chr15:92439662[ . PASS SVTYPE=BND;MATEID=r_194_0 TR:VR 61:17 32:0 chr18 79786166 i_464 C . PASS END=79786166;SVTYPE=INS;SVINSLEN=201;SVINSSEQ=CCACAGCACGGGCTCAGCCCAGACCCGACCACCACTGCCCGGATCTCAGCTATTCCCCATGGGGTCCCACAGCACGGGGCTCGGCCAGACCCGACCACCACTGCCCCGGATCTCAGCTATTCCCCATGGGGTTCCACAGCACAGGGCTCGGCCAGACCCGACCACCACTGCCCCGGATCTCAGCTATTCCCCATGGGGTTC TR:VR 38:4 17:0 chr19 41148285 d_912 C . PASS END=41148368;SVTYPE=DEL;SVLEN=-83 TR:VR 38:14 16:0 chr2 110856358 d_1081 A . PASS END=110857268;SVTYPE=DEL;SVLEN=-910 TR:VR 32:10 10:0 chr2 51694838 d_939 T . Too_small_size END=51694875;SVTYPE=DEL;SVLEN=-37 TR:VR 45:21 17:0 chr2 89793008 d_973 T . Too_low_VAF END=89793066;SVTYPE=INS;SVINSLEN=84;SVINSSEQ=CGATTCCATTCAATGATGATTCCATTTGGTTTCATTCGATGATTCTATTCAATTCCATTCGATGATGATTACTTTCTATTCCAT TR:VR 84:3 32:0 chr20 61429 i_686 C . Too_low_VAF END=61429;SVTYPE=INS;SVINSLEN=89;SVINSSEQ=ATTGCATTAAATTCCATTCCATCCCATTCCATTTCACTCCACTCCACTCCATATCCACTTGACTCCACTCAGTTCCACTCAATTCTCAT TR:VR 69:3 25:0 chr7 158395764 i_1272 G . PASS END=158395764;SVTYPE=INS;SVINSLEN=494;SVINSSEQ=GCGAGGCGCGAGGGGCCAGGGGCGAGGGCGCGAGGGGTGAGGGGTGCGGGGCGAGGGGCGAGGGCGCGAGGGGCCAGGGGCGAGGGGGTTGGGTGGGCGAGGGGCGAGGCGCGAGGGGCCAGGGTGAGGGGTGAGGGGGGCGAGGGGGTGAGGCGCGAGGGGCCAGGGGCGAGGGGCGAGGGGTGCGGGCGAGGGGGCGAGGCGCGAGGGGCCAGGGGTGAGGGGTGAGGCGCGAGGGGCCAGGGGCGAGGGCGAGGGCGAGGCGCGAGGGGCCAGAGGGCGGAGGGGAAGAGGGCGCGAGGGGCGAGGGGCCAGGGGCGAGGGGCCAGGGCGAGAGGCGAGGGGCGAGGGCGCAGGGCGAGGGGCGAGGGGCGAGGCGCGAGGGGAGAGGGGCGAGGGGGAGGGTGAGGCGCGAGGGGTGAGCGCAGGGCGAGGGGGCGTCAGGAGGGGCGAGGGGCGAGGGGCGCGAGGGGCGTAGGGCCAGGCGCGAGGCG TR:VR 74:6 17:0 chr7 31374392 r_465_0 A [chr7:31385857[G . PASS SVTYPE=BND;MATEID=r_465_1 TR:VR 74:8 23:0 chr7 31385857 r_465_1 G [chr7:31374392[G . PASS SVTYPE=BND;MATEID=r_465_0 TR:VR 74:8 23:0 chr8 112496539 d_1871 G . PASS END=112497031;SVTYPE=DEL;SVLEN=-492 TR:VR 90:22 19:0 chr8 4178996 i_1307 T . PASS END=4179017;SVTYPE=INS;SVINSLEN=85;SVINSSEQ=CCCCATCAAGCTACCAATGACTACCAATTCAATGGTAGTCATTGGTAGTCATTGGTAGTCAATTCAATGGTAGTCAAGCTACCAA TR:VR 15:3 14:0 chrX 67991403 d_2058 A . PASS END=67991532;SVTYPE=DEL;SVLEN=-129 TR:VR 60:8 21:0 chr1 152047892 r_31 T . PASS END=152057038;SVTYPE=DEL;SVLEN=-9146 TR:VR 55:16 21:0 chr1 50514480 d_26 G . PASS END=50515775;SVTYPE=DEL;SVLEN=-1295 TR:VR 23:12 20:0 chr10 44666918 d_253 T . PASS END=44669351;SVTYPE=DEL;SVLEN=-2433 TR:VR 33:9 17:0 chr11 34387061 r_78 A . PASS END=35442230;SVTYPE=DUP;SVLEN=1055169 TR:VR 57:9 39:0 chr12 54929608 d_368 G . PASS END=54929665;SVTYPE=DEL;SVLEN=-57 TR:VR 18:9 21:0 chr13 21243054 r_136_0 T TACTTTTTATTT]chrX:65384526] . Too_low_VAF SVTYPE=BND;MATEID=r_136_1;SVINSLEN=11;SVINSSEQ=ACTTTTTATTT TR:VR 176:3 77:1 chrX 65384526 r_136_1 T TAAATAAAAAGT]chr13:21243054] . Too_low_VAF SVTYPE=BND;MATEID=r_136_0;SVINSLEN=11;SVINSSEQ=AAATAAAAAGT TR:VR 176:3 77:1 chr15 92476699 d_609 T . PASS END=92478262;SVTYPE=DEL;SVLEN=-1563 TR:VR 40:15 17:0 chr19 41460944 d_913 A . PASS END=41461045;SVTYPE=DEL;SVLEN=-101 TR:VR 44:16 17:0 chr2 113185702 d_1082 T . PASS END=113185751;SVTYPE=DEL;SVLEN=-49 TR:VR 36:16 15:0 chr2 91513290 d_1056 G . Too_low_VAF END=91513351;SVTYPE=DEL;SVLEN=-61 TR:VR 202:4 95:1 chr8 113348450 i_1331 T . PASS END=113348450;SVTYPE=INS;SVINSLEN=1187;SVINSSEQ=AAGATGAAAACCTGATTTTTAGTACAATTTGATATTGAGGAACATATATTTAATAAGGCCGGGTACTTAGGTATAATAATTGGGTAAATTGTACCTTTTATTTTGGCCCTAACTGGTCACACTTCTGGGAATATTCTTCCCCTATCAGGAATTTCCATGTTACCAATATAATTTTGGGATTCAGTCACCTTTATTAGACATGTGGCCCCATGTGAAGTTTCTTTTTCTTTCTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCTACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGGTATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGTACTAAAAATCAGGAAACTAAGCTCCTAGTAGAGAACTGGTCAAAGGGAAGATCTTTGTGGAGTCAGCAGTTTCCTCTGTCCTACAATTTGGCAAAATAATCTCATAAGCACAAGAAGGTTAATATGCTTGCATTAAAAATGTTAAGTTACTTATAATCCAATTTAAATGTAAGTTCAAATACCTTAACATGTTCACATTACTTTTTTAATTCACAAAAACGTTCTTATCTATCTTTATTTTAAGATGTTTTCCACATACATGCTTAGTGAATTTTCTTTTAGGAGATGTAAGAGAGTCTACAAATCTTTATTCTACTATTTCCCAAAATATACCCAATTACTGGCAAAAAATGTTATTATTAAACTGATGAGAAAATATAAAGGTTTATTACTGGATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA TR:VR 85:15 13:0 chr8 41900364 i_1309 A . PASS END=41900435;SVTYPE=INS;SVINSLEN=159;SVINSSEQ=ACATCATCACCAGCATCATCATCACCATCACATCATCATCACCAACATGTCATCATGGCATGATCATCATCCCCATCATATCACCATCATCAACACTATTATCATCCCCATCATCATCATCACCACACCAGCATCACCATCATCATTATTATCACCATC TR:VR 38:4 19:0 chr9 125902085 r_527 T . PASS END=126024154;SVTYPE=DUP;SVLEN=122069 TR:VR 77:16 29:0 chrX 18194040 d_2043 A . PASS END=18194091;SVTYPE=DEL;SVLEN=-51 TR:VR 36:14 14:0 chr1 244906476 d_191 C . Too_small_size END=244906513;SVTYPE=DEL;SVLEN=-37 TR:VR 38:6 6:0 chr10 46478466 d_254 T . Too_small_size END=46478510;SVTYPE=DEL;SVLEN=-44 TR:VR 37:13 13:0 chr11 34666142 d_303 G . PASS END=34666350;SVTYPE=DEL;SVLEN=-208 TR:VR 39:4 16:0 chr17_KI270730v1_random 92455 i_437 T . Too_low_VAF END=92456;SVTYPE=INS;SVINSLEN=54;SVINSSEQ=GGATTTAGAATGGAATATAATGGAATGGATTTAGAATAGAATGTGACGGAATGG TR:VR 193:7 90:0 chr2 208068971 d_1111 C . PASS END=208069684;SVTYPE=DEL;SVLEN=-713;SVINSLEN=269;SVINSSEQ=GTGATCTCAGCTCATTGCAAACTCCGCCTCCTGGGCTCAAGCAATTCTCCTGCCTCAGGCTCCCAAGTAGCTGGGATTACAGGCATCCACCACCATGCCCAGCTAATTTTTGTATTTTTAGTAAAGACAGGGTTTCACCATGTTGGTCAGGCTGATCTCGAACTCCTGACCTCAGGTAATCTGCCCGCCTTGGCCTCCCAAAGTGCTGGGATTACAGAGGCATGAGCCACTGTGCCTGGCCCCCTTTCTTCTTTTTTTTCTTCTTTTTT TR:VR 40:14 21:0 chr2 51923039 d_941 C . Too_small_size END=51923079;SVTYPE=DEL;SVLEN=-40 TR:VR 41:15 18:0 chr22 27167329 r_349 A . PASS END=27185291;SVTYPE=DUP;SVLEN=17962 TR:VR 59:14 30:0 chr3 10455278 r_357 C . PASS END=13041958;SVTYPE=DUP;SVLEN=2586680 TR:VR 83:5 23:0 chr4 106863400 d_1478 G . Too_small_size END=106863440;SVTYPE=DEL;SVLEN=-40 TR:VR 34:19 28:0 chr6 146014599 r_452_0 T T]chrUn_GL000224v1:11353] . Too_low_VAF SVTYPE=BND;MATEID=r_452_1 TR:VR 528:5 303:0 chrUn_GL000224v1 11353 r_452_1 G G]chr6:146014599] . Too_low_VAF SVTYPE=BND;MATEID=r_452_0 TR:VR 528:5 303:0 chr7 154779226 i_1225 C . PASS END=154779226;SVTYPE=INS;SVINSLEN=100;SVINSSEQ=CACCACCACCACAACCACCCCCACCATCACCTCCAAAACCTCCACCACCAGCACCACCACCATCACTTCCACCACCACCACCACAACTACCCCCACCATC TR:VR 75:4 19:0 chr7 31947907 d_1712 T . PASS END=31948309;SVTYPE=DEL;SVLEN=-402 TR:VR 67:34 15:0 chr8 114316409 d_1872 G . Too_small_size END=114316453;SVTYPE=DEL;SVLEN=-44 TR:VR 115:17 10:0 chr9 68957124 r_523 C . PASS END=70509979;SVTYPE=DUP;SVLEN=1552855 TR:VR 80:10 26:0 chr1 152060764 r_32 A . PASS END=152065579;SVTYPE=DUP;SVLEN=4815 TR:VR 49:8 23:0 chr1 245677654 d_192 T . Too_small_size END=245677694;SVTYPE=DEL;SVLEN=-40 TR:VR 20:16 19:0 chr11 38474757 r_79 A . PASS END=38491697;SVTYPE=DUP;SVLEN=16940 TR:VR 52:9 26:0 chr13 26228647 r_137 C . PASS END=26272502;SVTYPE=DUP;SVLEN=43855 TR:VR 68:14 33:0 chr15 94131437 d_610 T . PASS END=94132282;SVTYPE=DEL;SVLEN=-845 TR:VR 40:6 17:0 chr17 51044218 r_236 C . PASS END=51057185;SVTYPE=DUP;SVLEN=12967 TR:VR 45:9 18:0 chr2 208069287 d_1112 T . PASS END=208069684;SVTYPE=DEL;SVLEN=-397 TR:VR 39:10 19:0 chr2 52754211 d_942 G . PASS END=52754307;SVTYPE=DEL;SVLEN=-96 TR:VR 36:11 21:0 chr22 29053128 r_350_0 G [chr4:3483403[G . PASS SVTYPE=BND;MATEID=r_350_1 TR:VR 84:14 24:0 chr4 3483403 r_350_1 G [chr22:29053128[G . PASS SVTYPE=BND;MATEID=r_350_0 TR:VR 84:14 24:0 chr3 105972915 d_1343 T . PASS END=105973236;SVTYPE=DEL;SVLEN=-321 TR:VR 38:10 17:0 chr6 146014600 r_453_0 C C]chrUn_GL000224v1:17662] . Too_low_VAF SVTYPE=BND;MATEID=r_453_1 TR:VR 463:3 214:0 chrUn_GL000224v1 17662 r_453_1 G G]chr6:146014600] . Too_low_VAF SVTYPE=BND;MATEID=r_453_0 TR:VR 463:3 214:0 chr7 63640712 d_1747 G . PASS END=63641660;SVTYPE=DEL;SVLEN=-948;SVINSLEN=2;SVINSSEQ=TG TR:VR 42:5 19:0 chr8 115857652 r_504 C . PASS END=115860048;SVTYPE=DUP;SVLEN=2396 TR:VR 106:9 17:0 chr9 73075384 d_1898 C . PASS END=73077399;SVTYPE=DEL;SVLEN=-2015 TR:VR 32:16 17:0 chrX 69578812 r_543 A . Too_low_VAF END=69750622;SVTYPE=DUP;SVLEN=171810 TR:VR 98:3 30:0 chr1 52134355 r_13 T . PASS END=52867329;SVTYPE=DUP;SVLEN=732974 TR:VR 52:14 37:0 chr12 58950436 d_369 T . PASS END=58950676;SVTYPE=DEL;SVLEN=-240 TR:VR 50:5 27:0 chr13 26370817 d_399 T . PASS END=26373179;SVTYPE=DEL;SVLEN=-2362 TR:VR 21:4 17:0 chr15 97413577 r_195 T . PASS END=97416465;SVTYPE=DEL;SVLEN=-2888;SVINSLEN=7;SVINSSEQ=TTGTCAT TR:VR 51:16 20:0 chr17 52055930 r_237 T . PASS END=52123033;SVTYPE=DUP;SVLEN=67103 TR:VR 65:19 36:0 chr19 42531277 i_512 T . PASS END=42531277;SVTYPE=INS;SVINSLEN=104;SVINSSEQ=TTCCTACTCATTTTACCCTGTATTACTGAAAATAAAAATGGGGGGGGGGCAAATAAAGACTTTAATATCTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA TR:VR 44:14 9:0 chr2 211211128 r_309 T . PASS END=211604999;SVTYPE=DUP;SVLEN=393871 TR:VR 90:17 23:0 chr2 55483474 r_277 A . PASS END=57225384;SVTYPE=DUP;SVLEN=1741910 TR:VR 91:14 41:0 chr5 162008567 r_419_0 T ]chr7:149564693]G . PASS SVTYPE=BND;MATEID=r_419_1 TR:VR 111:7 33:0 chr7 149564693 r_419_1 G G[chr5:162008567[ . PASS SVTYPE=BND;MATEID=r_419_0 TR:VR 111:7 33:0 chr8 116550992 r_505_0 A A]chr9:8039328] . PASS SVTYPE=BND;MATEID=r_505_1 TR:VR 108:12 38:0 chr9 8039328 r_505_1 T T]chr8:116550992] . PASS SVTYPE=BND;MATEID=r_505_0 TR:VR 108:12 38:0 chr9 127445867 d_1908 A . Too_small_size END=127445905;SVTYPE=DEL;SVLEN=-38 TR:VR 20:5 19:0 chrX 71983288 d_2059 T . PASS END=71983620;SVTYPE=DEL;SVLEN=-332 TR:VR 51:10 25:0 chr1 54447094 r_14 C . PASS END=54460010;SVTYPE=DUP;SVLEN=12916 TR:VR 35:3 25:0 chr11 402396 d_289 G . PASS END=402452;SVTYPE=DEL;SVLEN=-56;SVINSLEN=1;SVINSSEQ=G TR:VR 30:6 11:0 chr12 58984823 d_370 G . PASS END=58985104;SVTYPE=DEL;SVLEN=-281 TR:VR 74:12 19:0 chr13 26913972 r_138_0 A [chr20:19087855[T . PASS SVTYPE=BND;MATEID=r_138_1 TR:VR 63:5 33:0 chr20 19087855 r_138_1 T [chr13:26913972[T . PASS SVTYPE=BND;MATEID=r_138_0 TR:VR 63:5 33:0 chr16 88508676 r_226 G . PASS END=88809021;SVTYPE=DUP;SVLEN=300345 TR:VR 93:17 38:0 chr17 53029405 d_772 C . PASS END=53029466;SVTYPE=DEL;SVLEN=-61 TR:VR 25:13 21:0 chr19 42583692 i_513 G . PASS END=42583709;SVTYPE=INS;SVINSLEN=184;SVINSSEQ=CATGAATAAGACTCCTGTCAGGTCACCATGGCAGCTTGTGTTTCTCAAGAGGATTACTGAGTTCTTGGTGGAGCACATTAATGAATAGGACCGAGAAAGTATAGGCTTATGTATGTTGAAAAATGTCCCTAGGTAATTCCAGCACTCCCAGCTAATAGTTGATTAATTAATAATCAATTGACTT TR:VR 47:3 19:0 chr2 11607044 d_934 G . PASS END=11607923;SVTYPE=DEL;SVLEN=-879 TR:VR 19:5 15:0 chr2 211959021 r_310 A . PASS END=211964848;SVTYPE=DUP;SVLEN=5827 TR:VR 41:4 21:0 chr2 55926888 d_943 A . PASS END=55926940;SVTYPE=DEL;SVLEN=-52 TR:VR 50:14 13:0 chr22 34497841 d_1277 C . PASS END=34497945;SVTYPE=DEL;SVLEN=-104 TR:VR 34:15 19:0 chr4 108871753 r_388 T . PASS END=108880680;SVTYPE=DUP;SVLEN=8927 TR:VR 30:3 23:0 chr4 49651552 d_1447 G . Too_low_VAF END=49651532;SVTYPE=INS;SVINSLEN=85;SVINSSEQ=CAACAGAATCAACCCGAGAGGAATGGAATGGAAAGGAATGGAATGGAATGGAAAGGAATGGAATGGAATCAAACCGACAGGAATG TR:VR 148:5 49:0 chr4 82340631 r_385_0 A [chr4:82345155[T . PASS SVTYPE=BND;MATEID=r_385_1 TR:VR 91:6 23:0 chr4 82345155 r_385_1 T [chr4:82340631[T . PASS SVTYPE=BND;MATEID=r_385_0 TR:VR 91:6 23:0 chr8 118333879 d_1873 C . Too_small_size END=118333915;SVTYPE=DEL;SVLEN=-36;SVINSLEN=12;SVINSSEQ=ACATTGGCAGGG TR:VR 79:6 21:0 chr9 128629686 r_528 G . Too_low_VAF END=128797714;SVTYPE=DUP;SVLEN=168028 TR:VR 66:3 30:0 chr1 154632319 d_173 A . Too_small_size END=154632362;SVTYPE=DEL;SVLEN=-43 TR:VR 46:23 13:0 chr1 56694414 r_15 A . PASS END=56695395;SVTYPE=DEL;SVLEN=-981 TR:VR 29:8 17:0 chr13 26913988 r_139_0 C C]chr20:19088740] . PASS SVTYPE=BND;MATEID=r_139_1 TR:VR 63:5 33:0 chr20 19088740 r_139_1 C C]chr13:26913988] . PASS SVTYPE=BND;MATEID=r_139_0 TR:VR 63:5 33:0 chr15 97523209 r_196_0 T T]chr9:85849925] . PASS SVTYPE=BND;MATEID=r_196_1 TR:VR 97:9 43:0 chr9 85849925 r_196_1 G G]chr15:97523209] . PASS SVTYPE=BND;MATEID=r_196_0 TR:VR 97:9 43:0 chr17 58824234 r_238 T . PASS END=58834937;SVTYPE=DEL;SVLEN=-10703;SVINSLEN=21;SVINSSEQ=ATATTTATTTATATTTAATTT TR:VR 33:7 19:0 chr17_GL000205v2_random 29447 d_808 A . Too_small_size;Too_low_VAF END=29432;SVTYPE=INS;SVINSLEN=33;SVINSSEQ=GGTTCAGACAATTGTAGCAATGTTCTGGAATCC TR:VR 150:4 94:0 chr19 42773239 r_266_0 C [chr6:8090926[G . PASS SVTYPE=BND;MATEID=r_266_1 TR:VR 103:7 41:0 chr6 8090926 r_266_1 G [chr19:42773239[G . PASS SVTYPE=BND;MATEID=r_266_0 TR:VR 103:7 41:0 chr2 116720758 i_657 T . PASS END=116720764;SVTYPE=INS;SVINSLEN=87;SVINSSEQ=CGCACAAGACATGCAAGGACAAGCAAAACAAAATCTAACTGTCAGGACCCCATCATGAATTGGCTGTCCAACTGGCATTGGCGTTGG TR:VR 36:5 19:0 chr2 212693362 r_311_0 T TTTTTTTTTTTTTTTTTTT]chrY:9591892] . PASS SVTYPE=BND;MATEID=r_311_1;SVINSLEN=18;SVINSSEQ=TTTTTTTTTTTTTTTTTT TR:VR 58:3 22:0 chrY 9591892 r_311_1 A AAAAAAAAAAAAAAAAAAA]chr2:212693362] . PASS SVTYPE=BND;MATEID=r_311_0;SVINSLEN=18;SVINSSEQ=AAAAAAAAAAAAAAAAAA TR:VR 58:3 22:0 chr2 57237298 d_944 A . PASS END=57238855;SVTYPE=DEL;SVLEN=-1557 TR:VR 45:4 23:0 chr3 196271664 d_1380 A . PASS END=196271798;SVTYPE=INS;SVINSLEN=135;SVINSSEQ=TCTCGGCTCTCACAGCCATAATCATAGCACACTGTAGCCTCAAACTCCTGAGCTTAAGCAATCCTCCCATCTGAGCCTCCAGAATAGCTAGGACCAGCATAATGTATTTTTTAAATGTCCTTCTCCTTCTTTCCT TR:VR 41:4 19:0 chr4 109969920 r_389 A . PASS END=110032997;SVTYPE=DEL;SVLEN=-63077 TR:VR 34:15 38:0 chr4 82355266 r_386_0 A A[chr6:82864691[ . PASS SVTYPE=BND;MATEID=r_386_1 TR:VR 119:18 43:0 chr6 82864691 r_386_1 T ]chr4:82355266]T . PASS SVTYPE=BND;MATEID=r_386_0 TR:VR 119:18 43:0 chr6 32980067 r_439 C . Too_low_VAF END=33179077;SVTYPE=DUP;SVLEN=199010 TR:VR 95:4 39:0 chr7 106796826 r_479_0 T T[chr8:74070155[ . PASS SVTYPE=BND;MATEID=r_479_1 TR:VR 94:22 20:0 chr8 74070155 r_479_1 G ]chr7:106796826]G . PASS SVTYPE=BND;MATEID=r_479_0 TR:VR 94:22 20:0 chr8 118539881 d_1874 G . PASS END=118540819;SVTYPE=DEL;SVLEN=-938 TR:VR 68:5 18:0 chr9 81814899 d_1899 G . PASS END=81814979;SVTYPE=DEL;SVLEN=-80 TR:VR 17:10 16:0 chrX 75772549 r_544_0 C C]chrX:94122205] . PASS SVTYPE=BND;MATEID=r_544_1 TR:VR 92:31 38:0 chrX 94122205 r_544_1 T T]chrX:75772549] . PASS SVTYPE=BND;MATEID=r_544_0 TR:VR 92:31 38:0 chr1 155339568 d_174 G . Too_small_size END=155339607;SVTYPE=DEL;SVLEN=-39 TR:VR 36:8 16:0 chr11 46111598 r_80 C . PASS END=86573183;SVTYPE=DEL;SVLEN=-40461585 TR:VR 54:10 50:0 chr15 97523209 r_197_0 T T[chr9:83879915[ . PASS SVTYPE=BND;MATEID=r_197_1 TR:VR 78:6 34:0 chr9 83879915 r_197_1 C ]chr15:97523209]C . PASS SVTYPE=BND;MATEID=r_197_0 TR:VR 78:6 34:0 chr16 46412570 d_712 T . Too_low_VAF END=46412738;SVTYPE=DEL;SVLEN=-168;SVINSLEN=99;SVINSSEQ=GGAATCATAGAATTGAATGGAATCGAATGGAATCATCACTCGAATGGATCATCGAATGGAATCATCAAATCAAATGAAATAGAATGCAATCATCGAATG TR:VR 930:3 788:0 chr2 215121318 d_1113 A . PASS END=215121369;SVTYPE=DEL;SVLEN=-51 TR:VR 31:8 18:0 chr2 59817566 d_945 C . PASS END=59818779;SVTYPE=DEL;SVLEN=-1213 TR:VR 36:14 23:0 chr21 44549224 r_345 G . PASS END=44554166;SVTYPE=DUP;SVLEN=4942 TR:VR 33:8 18:0 chr22 35764278 r_351 T . PASS END=35767351;SVTYPE=DUP;SVLEN=3073 TR:VR 44:3 27:0 chr4 111876726 r_390 C . PASS END=112905825;SVTYPE=DUP;SVLEN=1029099 TR:VR 65:14 25:0 chr4 83096116 r_387 C . PASS END=83185567;SVTYPE=DUP;SVLEN=89451 TR:VR 103:15 26:0 chr5 164550653 r_420 A . PASS END=164562114;SVTYPE=DEL;SVLEN=-11461 TR:VR 49:24 22:0 chr7 10687790 d_1699 T . PASS END=10688041;SVTYPE=DEL;SVLEN=-251 TR:VR 53:9 13:0 chr7 36130659 r_466_0 A A]chr9:70166245] . PASS SVTYPE=BND;MATEID=r_466_1 TR:VR 107:14 37:0 chr9 70166245 r_466_1 A A]chr7:36130659] . PASS SVTYPE=BND;MATEID=r_466_0 TR:VR 107:14 37:0 chr8 121256335 r_506 T . PASS END=121264837;SVTYPE=DUP;SVLEN=8502 TR:VR 100:8 18:0 chr9 84622602 i_1381 T . PASS END=84622602;SVTYPE=INS;SVINSLEN=53;SVINSSEQ=TCCATCACAGAAGAAAACCTGATGTCTGAGCTGAATCCTAATCATGAAGATGT TR:VR 50:21 21:0 chrX 77577949 r_545 G . PASS END=91519605;SVTYPE=DUP;SVLEN=13941656 TR:VR 86:37 34:0 chr10 62086573 d_256 C . PASS END=62086993;SVTYPE=DEL;SVLEN=-420 TR:VR 29:9 12:0 chr11 46111597 r_81 G . PASS END=86573184;SVTYPE=DUP;SVLEN=40461587 TR:VR 54:19 50:0 chr15 98926969 r_198 C . PASS END=99378458;SVTYPE=DUP;SVLEN=451489 TR:VR 63:7 38:0 chr2 216120426 d_1114 A . PASS END=216120511;SVTYPE=DEL;SVLEN=-85 TR:VR 32:8 17:0 chr4 114345741 d_1479 T . PASS END=114345895;SVTYPE=DEL;SVLEN=-154 TR:VR 33:19 15:0 chr7 107624171 r_480_0 G ]chrX:91522061]T . PASS SVTYPE=BND;MATEID=r_480_1 TR:VR 89:10 29:0 chrX 91522061 r_480_1 T T[chr7:107624171[ . PASS SVTYPE=BND;MATEID=r_480_0 TR:VR 89:10 29:0 chr7 38409526 r_467 A . PASS END=38418349;SVTYPE=DEL;SVLEN=-8823 TR:VR 45:10 13:0 chr7 65275233 i_1192 T . PASS END=65275233;SVTYPE=INS;SVINSLEN=175;SVINSSEQ=TGTCACTTACTGTTTTCAGGAATTGTGCTTTATCTGTGAATTCTGAAAATTTAATTATAATGTGTTCTAGGGCAATCCTTATTAGGTTCTTTTTGCTGTAAGTATATTGAGCTTCATGAAACTGGATGTTCATATCTTTTTCTAAATTTGGGGAGTTTTTGTTCTTGTTGTTTTT TR:VR 41:17 15:0 chr8 122129767 r_507 G . PASS END=122147678;SVTYPE=DUP;SVLEN=17911 TR:VR 118:7 23:0 chrX 78135077 r_546 C . PASS END=91536039;SVTYPE=DEL;SVLEN=-13400962 TR:VR 109:34 45:0 chr1 157750739 r_33_0 A A]chr2:210234911] . PASS SVTYPE=BND;MATEID=r_33_1 TR:VR 79:7 41:0 chr2 210234911 r_33_1 T T]chr1:157750739] . PASS SVTYPE=BND;MATEID=r_33_0 TR:VR 79:7 41:0 chr1 62183134 r_16_0 T [chr2:149320212[CATCCCG . PASS SVTYPE=BND;MATEID=r_16_1;SVINSLEN=6;SVINSSEQ=CATCCC TR:VR 71:4 33:0 chr2 149320212 r_16_1 G [chr1:62183134[GGGATGG . PASS SVTYPE=BND;MATEID=r_16_0;SVINSLEN=6;SVINSSEQ=GGGATG TR:VR 71:4 33:0 chr13 29014548 d_400 A . Too_small_size END=29014585;SVTYPE=DEL;SVLEN=-37 TR:VR 32:8 27:0 chr14 20427783 d_433 A . Too_small_size END=20427823;SVTYPE=DEL;SVLEN=-40 TR:VR 40:14 14:0 chr15 99254337 d_612 T . Too_small_size END=99254378;SVTYPE=DEL;SVLEN=-41 TR:VR 53:4 13:0 chr2 220329387 i_667 C . PASS END=220329387;SVTYPE=INS;SVINSLEN=191;SVINSSEQ=TATTACTTGTCTTGGATGCCTGTGCTTGTGAAGTATTGCTCAAGAAATTTTTGCCCAGACCAGTGTCCTGAAGAGTTTCTTTTGGGAGTTTTCTCTTAGAAGGTCCACGGTTTTGAGGTGTAAATTTAAGTCTTTAATCCATTTTGATTTGATTTTGTGTATGACAAGGGATAGGGGTCTAGTTTTGATTC TR:VR 38:4 13:0 chr4 1145943 d_1399 G . PASS END=1146034;SVTYPE=INS;SVINSLEN=245;SVINSSEQ=GGGAGAGCTTAGAATGCCATGGATATCATGGAAATGGCACCGATGGGGAGAGTTTAGAACGCCGTGGATATTATGGAAATGGCACCGATGGGGAGAGTTTAGAACGCCGTGGATATCATGGAAATGTCACCGACGGGGAGAGCTTAGAACGCCATGGATATCATGGAAATGGCACCGATGGGGAGAGTTTAGAACGCCGTGGATATCATGGAAATGGCACCGACAGGGAGAGTTTAGAACGCCGT TR:VR 68:5 10:0 chr4 87651477 d_1473 A . PASS END=87651530;SVTYPE=DEL;SVLEN=-53;SVINSLEN=1;SVINSSEQ=G TR:VR 21:8 13:0 chr7 108052545 r_481 C . PASS END=108063298;SVTYPE=DUP;SVLEN=10753;SVINSLEN=3;SVINSSEQ=GGT TR:VR 76:13 23:0 chr8 122151112 i_1332 T . Too_small_size END=122151112;SVTYPE=INS;SVINSLEN=45;SVINSSEQ=GAGATTCCCTAACCTATCTTCAGTGAGAAAATTACATTTCACAGG TR:VR 74:5 10:0 chrX 78135246 r_548_0 C ]chrY:3865042]CG . PASS SVTYPE=BND;MATEID=r_548_1;SVINSLEN=1;SVINSSEQ=C TR:VR 49:20 36:0 chrY 3865042 r_548_1 G GG[chrX:78135246[ . PASS SVTYPE=BND;MATEID=r_548_0;SVINSLEN=1;SVINSSEQ=G TR:VR 49:20 36:0 chr1 158767008 d_176 G . PASS END=158767633;SVTYPE=DEL;SVLEN=-625 TR:VR 35:12 24:0 chr13 30650632 r_141_0 A ]chr16:49933461]AA . PASS SVTYPE=BND;MATEID=r_141_1;SVINSLEN=1;SVINSSEQ=A TR:VR 74:10 33:0 chr16 49933461 r_141_1 A AT[chr13:30650632[ . PASS SVTYPE=BND;MATEID=r_141_0;SVINSLEN=1;SVINSSEQ=T TR:VR 74:10 33:0 chr14 20725838 d_434 T . PASS END=20726109;SVTYPE=DEL;SVLEN=-271 TR:VR 45:11 18:0 chr17 598531 d_750 G . Too_small_size END=598510;SVTYPE=INS;SVINSLEN=55;SVINSSEQ=CCGCCCATCTTCTGAGATGTGGGGAGCGCCTCTGCCCTGCCACCCCATCTGGGAT TR:VR 26:5 18:0 chr18 80258949 r_259_0 T TAGGGTGAGGGTTAGGGTGAGGGTTAGGGTGAGGGTGAGGGTGAGGGTTAGGGTGAGGGTTAGGGTGAGGGTGAGGGTTAGGGTGAGGGTTAGGGTTAGGGTGAGGGTGAGGGTTAGGGTGAGGGTGAGGGTTAGGGTTAGGGTGAGGGTTAGGGTTAGGGTGAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTA[chr3:47781880[ . PASS SVTYPE=BND;MATEID=r_259_1;SVINSLEN=211;SVINSSEQ=AGGGTGAGGGTTAGGGTGAGGGTTAGGGTGAGGGTGAGGGTGAGGGTTAGGGTGAGGGTTAGGGTGAGGGTGAGGGTTAGGGTGAGGGTTAGGGTTAGGGTGAGGGTGAGGGTTAGGGTGAGGGTGAGGGTTAGGGTTAGGGTGAGGGTTAGGGTTAGGGTGAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTA TR:VR 90:6 35:0 chr3 47781880 r_259_1 G ]chr18:80258949]TAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTCACCCTAACCCTAACCCTCACCCTAACCCTAACCCTCACCCTCACCCTAACCCTCACCCTCACCCTAACCCTAACCCTCACCCTAACCCTCACCCTCACCCTAACCCTCACCCTAACCCTCACCCTCACCCTCACCCTAACCCTCACCCTAACCCTCACCCTG . PASS SVTYPE=BND;MATEID=r_259_0;SVINSLEN=211;SVINSSEQ=TAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTCACCCTAACCCTAACCCTCACCCTAACCCTAACCCTCACCCTCACCCTAACCCTCACCCTCACCCTAACCCTAACCCTCACCCTAACCCTCACCCTCACCCTAACCCTCACCCTAACCCTCACCCTCACCCTCACCCTAACCCTCACCCTAACCCTCACCCT TR:VR 90:6 35:0 chr2 220333511 i_668 C . PASS END=220333529;SVTYPE=INS;SVINSLEN=69;SVINSSEQ=CCTATGTCTTTCTCTACCTCCTGTTTGCCTCCTGTTTACCTTCCTCCCTCTTACTCCATCCATGCCTCT TR:VR 37:4 13:0 chr2 60935664 d_946 C . Too_small_size END=60935702;SVTYPE=DEL;SVLEN=-38 TR:VR 45:10 13:0 chr2 90288310 i_588 A . PASS END=90288310;SVTYPE=INS;SVINSLEN=2042;SVINSSEQ=GTCAAGCCCACCAGCCAGCCAAGACAGGCATGCCAGCCAAGCCAGCCAGGCAGCCAAGCCAGCCAAGCCAGGCAGCAAGCAAAGCCAGGCAGGCCAGCCAAGCCAGCTAGGCAGCCAAGCCAGAAAACCAGCCAGCCAGCCAAGCCAGGCATGCCAGCCAAGCCATCCCCCGGCTAAGCCAGCTGGCCAGCCAAGCCAGACAAGCCACCCGGCCATCCAAGCCAGCCAGCCAAGCCAGCCAAGCCAGCCCAAGCTCAGTCAGCCAGCCAGCCAGCCAAGCCAGCCAAGTGAGCTAGCCAGCAAAACCAGCTAAGCCACCCACCCAGCCAGCCAGCCAGACCAAGCCAGCCAGCCTGCCCGCCAGCCAGCCAGCCAAGCGAGCCAAGCCAGCCAAGCCAGCCAGCCAGCCAAGCCAGCCCCAGCCAAGCCAGGCAATCCAAACAGCCACTCAAGCCAGCCAAGCCAGCCGAGCCAGCCAACCAGCCAGTCAGCCAGCCCCAGCCAGCCAAGCCAGCCAAGCCAGCCAAGCCAGCCAAGCCCGCCAGCCAGCCAGCCAGAAGCTAGCCAAGCCAGCCAGCCAGCCCAACCAGCCAAGCAGCCAAGCCAGCCAAGCCAGCCAGCCAAGCCAGGCAGCCATGTCCAGCCAAGCCAGCCAAGGCAGCCAAGCCAGCCAGCCAGCCAGCCAGCCAAGCCAGGCATGACCAGCCAAGCCATCCAGCCAACTAAGCCAGACCGGGCAGCCAAGCCAGCCAAGCCAGCCACCGAGCCAAGCCAAGCCAACTAGCCAAGCCAGCCAGCCAGGCAGCCAGCCAAACCAGCCAAGCCACCCAGCCAGCCAGCACCAAGCCAGCCCCAGCCAGCCAGCCAGCCAGCCAGGCAGCCAGCCAAGCCAGCCAGCCAAGCCAAGCCAAGCCAGCCAAGCCAGCCAGCCAGCCAGAGCAGCCAAGCCAGACAGCCAGCCAAGCCCAGCCAGCCTCCAAGCCAGCCAAGCCAGCCAAGGCCAGCCAGCCAGCCAAGCCGGCCAAGCCACCAGCAAAGCCAGCCAGCCAGCCAGCCAGCCAGCCAAGCTGGCCAAGCCAACCAAGCCAGGCAGCCAAGCCAGCCAAGCCAGCCAAGCCGCCAGCCAGCCCCAGCCATGCCAGCCAAGCCAGCCAGGCAGCCAAGCCAGCCAAGCCAGGCAGCCAGCCAGCCAGGCCAGCCGGGCTAGCCAGGCAGCCAAGCCAGCAAAACCAGCCAGCCAGCCAAGCCAGGCATGCCAGCCAAGCCATCCAGCCGGCTAAGCCAGCTGGCCAGCCAAGCCAGACAAGCCACTGCCATCCTGCCAGCCAGCCAAGCCAGCCAAGCCAGCCAAGTCAGTCAGCCAGCCAGCCAGCCAAGCCAGCCAAGCCTCACAGCCAGCAAAACCAGCCAAGCCACCCAGCCAGGCCAAGCCAGCCAAGCCACTTAGCCAGCCAGGCCCGCCAGCCAGCCAGCCAGCGAGCCAAGCCACCTGCCAGCCAGCCTGCCAAGCCAGCCGGCCAGCCAAGCCAGGCAATCCACTCAGCCACCAAGCCAGCCAAGTCACCTGACCATCCAAGCCAGCCAAGCCAGTCAGCCAGCCCAGACAGCCAAGCCAGCCAAGCCAGCCAACAGCCAAGCCTGCCAACCAGCCAAGACAGGCATGCTAGCCAAGCCAGCCAGACAGCCAAGCCAGCCAGGCAGCCAAGCCAGCCAAGCCAGCCAGCAAGCAAAGCCAGGCATGTGAGCCAAGCCAGCTAGGCAGCTGCTGCAGCCAGCCATAGCCAAGCCAGGCATGCCAGCCAAGCCATCCAGCCAACTAAGCCAGCCGGCTAGCCAAGCCAGCCAAGCCAGCCAACCAGCCAAGCCAGCCAGCCAGCCAAGCTACCCAGCCAGCCAGCTAGCCAAACCAGCCAAGCCACCCAGCCAGCTAAGCCACCCAGCCAGCCAAGCCAGCCAAGCCCATCAGCCAGCCAGGCAGCCAGCCACCCAAGCCAGCCAAGCCAGCCAAGCCAGCCAGCCACCCAGCCAGCCAAGCTCTCCCA TR:VR 53:4 17:0 chr4 88117325 d_1474 A . PASS END=88117393;SVTYPE=DEL;SVLEN=-68 TR:VR 31:19 13:0 chr6 34130156 r_440 G . PASS END=34586404;SVTYPE=DUP;SVLEN=456248 TR:VR 113:10 38:0 chr7 110026806 d_1754 A . PASS END=110026868;SVTYPE=DEL;SVLEN=-62 TR:VR 66:19 15:0 chr8 123382775 r_508 A . PASS END=123461184;SVTYPE=DEL;SVLEN=-78409;SVINSLEN=2;SVINSSEQ=GG TR:VR 140:14 32:0 chr9 87464448 d_1902 G . PASS END=87464520;SVTYPE=DEL;SVLEN=-72 TR:VR 31:15 12:0 chrX 78135245 r_547 A . PASS END=90288273;SVTYPE=DUP;SVLEN=12153028;SVINSLEN=1;SVINSSEQ=C TR:VR 66:14 41:0 chr1 71329818 d_30 T . PASS END=71330457;SVTYPE=DEL;SVLEN=-639;SVINSLEN=10;SVINSSEQ=TTTGCCTCAG TR:VR 28:8 23:0 chr14 21462761 r_159 C . PASS END=85536492;SVTYPE=DEL;SVLEN=-64073731;SVINSLEN=10;SVINSSEQ=ATGTTCTATG TR:VR 63:15 31:0 chr15 20342037 d_583 C . Too_low_VAF END=20342496;SVTYPE=DEL;SVLEN=-459;SVINSLEN=185;SVINSSEQ=CAGCTGGCCAAGACAGCCAAGCCATTCAGCCAGCCAAGCCAGCCCAGCCAGCCCAGCCACCCAGCCAGCCAAGCCACTCAGCCAGCCAAGCCAGCCCAGCCACCCAGCCAGCCAAGCCACCCTTCCAGCCAAGCCAGCCGAGGAAAGCCTGCCAGCCAAGCCAGCCAAGCCAGCCAAGCCAGCCA TR:VR 195:3 103:1 chr16 89535823 i_356 T . PASS END=89535823;SVTYPE=INS;SVINSLEN=157;SVINSSEQ=CTCTGGTGCTGTGTGGCTCTTCAGTGTGGCCTCTCTGGTGCTGTGTGGCCTTCAGTGTGGCCTCTCTGGTGCTGTGTGGCCTTCACTGTGGCCTCTCTGGTGCTGTGTGGCCTTCAGTGTGGCCTCTCTGGTGCTGTGTGGCCTTCAGTGTGGCCGC TR:VR 37:6 8:0 chr17 60817122 r_239_0 T ]chr2:237995424]C . PASS SVTYPE=BND;MATEID=r_239_1 TR:VR 62:10 34:0 chr2 237995424 r_239_1 C C[chr17:60817122[ . PASS SVTYPE=BND;MATEID=r_239_0 TR:VR 62:10 34:0 chr19 46403684 d_915 G . PASS END=46403937;SVTYPE=DEL;SVLEN=-253 TR:VR 48:12 18:0 chr2 61823385 i_565 A . Too_small_size END=61823385;SVTYPE=INS;SVINSLEN=40;SVINSSEQ=TATATATATATATATATATATATATATATATATATATATT TR:VR 50:8 14:0 chr22 36150321 r_352 A . PASS END=36172628;SVTYPE=DEL;SVLEN=-22307 TR:VR 47:30 35:0 chr4 92328095 d_1475 A . PASS END=92330516;SVTYPE=DEL;SVLEN=-2421 TR:VR 30:17 13:0 chr6 16140879 r_427 A . PASS END=16268821;SVTYPE=DUP;SVLEN=127942 TR:VR 87:8 31:0 chr6 34393798 r_441 T . PASS END=34420523;SVTYPE=DUP;SVLEN=26725 TR:VR 127:9 17:0 chr9 8991967 d_1889 G . Too_small_size END=8992012;SVTYPE=DEL;SVLEN=-45 TR:VR 31:6 21:0 chr1 162563689 r_34 T . PASS END=163056698;SVTYPE=DUP;SVLEN=493009 TR:VR 85:13 34:0 chr10 66446159 r_57_0 C CAGAACCTCTCTGG[chr9:138179424[ . Too_low_VAF SVTYPE=BND;MATEID=r_57_1;SVINSLEN=13;SVINSSEQ=AGAACCTCTCTGG TR:VR 71:3 50:1 chr9 138179424 r_57_1 G ]chr10:66446159]CCAGAGAGGTTCTG . Too_low_VAF SVTYPE=BND;MATEID=r_57_0;SVINSLEN=13;SVINSSEQ=CCAGAGAGGTTCT TR:VR 71:3 50:1 chr16 11747066 r_200_0 A A]chr5:160891780] . PASS SVTYPE=BND;MATEID=r_200_1 TR:VR 64:17 33:0 chr5 160891780 r_200_1 G G]chr16:11747066] . PASS SVTYPE=BND;MATEID=r_200_0 TR:VR 64:17 33:0 chr18 8640979 d_853 T . PASS END=8641151;SVTYPE=DEL;SVLEN=-172 TR:VR 21:16 19:0 chr19 46642512 d_916 A . PASS END=46643443;SVTYPE=DEL;SVLEN=-931 TR:VR 38:14 20:0 chr2 121113827 r_290 A . PASS END=121185558;SVTYPE=DUP;SVLEN=71731;SVINSLEN=11;SVINSSEQ=ATAGCGAGAGC TR:VR 58:8 36:0 chr2 222292021 d_1115 T . PASS END=222292238;SVTYPE=DEL;SVLEN=-217;SVINSLEN=7;SVINSSEQ=GTGTGTG TR:VR 28:8 22:0 chr2 66803016 d_947 T . PASS END=66803141;SVTYPE=DEL;SVLEN=-125 TR:VR 50:23 22:0 chr6 162285188 d_1664 T . PASS END=162286558;SVTYPE=DEL;SVLEN=-1370 TR:VR 29:12 22:0 chr9 93853898 r_524 A . PASS END=93858927;SVTYPE=DUP;SVLEN=5029 TR:VR 43:4 9:0 chr1 162720491 r_35_0 C [chr10:63664647[C . PASS SVTYPE=BND;MATEID=r_35_1 TR:VR 84:5 36:0 chr10 63664647 r_35_1 C [chr1:162720491[C . PASS SVTYPE=BND;MATEID=r_35_0 TR:VR 84:5 36:0 chr10 69392762 r_58_0 G G[chr3:126574884[ . PASS SVTYPE=BND;MATEID=r_58_1 TR:VR 46:6 36:0 chr3 126574884 r_58_1 G ]chr10:69392762]G . PASS SVTYPE=BND;MATEID=r_58_0 TR:VR 46:6 36:0 chr11 49518094 d_308 C . Too_small_size END=49518129;SVTYPE=DEL;SVLEN=-35 TR:VR 27:14 16:0 chr12 14522443 r_109 T . PASS END=15544827;SVTYPE=DUP;SVLEN=1022384 TR:VR 38:13 46:0 chr14 30001272 d_435 A . PASS END=30001377;SVTYPE=DEL;SVLEN=-105 TR:VR 19:9 12:0 chr16 11747082 r_201_0 T [chr5:102545809[C . PASS SVTYPE=BND;MATEID=r_201_1 TR:VR 67:18 29:0 chr5 102545809 r_201_1 C [chr16:11747082[C . PASS SVTYPE=BND;MATEID=r_201_0 TR:VR 67:18 29:0 chr17 69284939 r_240_0 C C[chr4:103974530[ . PASS SVTYPE=BND;MATEID=r_240_1 TR:VR 66:16 33:0 chr4 103974530 r_240_1 G ]chr17:69284939]G . PASS SVTYPE=BND;MATEID=r_240_0 TR:VR 66:16 33:0 chr19 47306352 d_917 T . PASS END=47306410;SVTYPE=DEL;SVLEN=-58 TR:VR 43:8 15:0 chr2 225552309 r_312_0 A ACCTAAAGAACCTAAAG[chr9:115278589[ . PASS SVTYPE=BND;MATEID=r_312_1;SVINSLEN=16;SVINSSEQ=CCTAAAGAACCTAAAG TR:VR 77:11 30:0 chr9 115278589 r_312_1 A ]chr2:225552309]CTTTAGGTTCTTTAGGA . PASS SVTYPE=BND;MATEID=r_312_0;SVINSLEN=16;SVINSSEQ=CTTTAGGTTCTTTAGG TR:VR 77:11 30:0 chr2 68929013 r_278 T . PASS END=69030217;SVTYPE=DUP;SVLEN=101204 TR:VR 92:14 28:0 chr4 97448167 d_1477 C . PASS END=97448214;SVTYPE=DEL;SVLEN=-47 TR:VR 22:16 18:0 chr5 50698964 d_1569 A . PASS END=50699016;SVTYPE=DEL;SVLEN=-52 TR:VR 22:12 13:0 chr6 16346898 r_428 G . PASS END=16363183;SVTYPE=DEL;SVLEN=-16285 TR:VR 84:5 24:0 chr6 35243789 d_1627 G . PASS END=35243847;SVTYPE=DEL;SVLEN=-58 TR:VR 67:7 11:0 chr7 11639679 d_1700 T . PASS END=11639832;SVTYPE=DEL;SVLEN=-153 TR:VR 52:7 19:0 chr7 40781660 d_1715 G . PASS END=40782336;SVTYPE=DEL;SVLEN=-676 TR:VR 47:15 11:0 chr9 134545966 d_1910 A . PASS END=134548402;SVTYPE=DEL;SVLEN=-2436;SVINSLEN=4;SVINSSEQ=TACG TR:VR 27:4 13:0 chr9 94467457 d_1903 G . Too_small_size END=94467500;SVTYPE=DEL;SVLEN=-43 TR:VR 28:7 22:0 chrX 26176400 d_2044 T . PASS END=26177254;SVTYPE=DEL;SVLEN=-854;SVINSLEN=8;SVINSSEQ=AAAATAAA TR:VR 41:3 18:0 chr1 162720505 r_36_0 C CTTTTTTTTT]chr10:63674756] . PASS SVTYPE=BND;MATEID=r_36_1;SVINSLEN=9;SVINSSEQ=TTTTTTTTT TR:VR 79:4 32:0 chr10 63674756 r_36_1 A AAAAAAAAAA]chr1:162720505] . PASS SVTYPE=BND;MATEID=r_36_0;SVINSLEN=9;SVINSSEQ=AAAAAAAAA TR:VR 79:4 32:0 chr1 7710694 r_0_0 A A]chr9:111089672] . PASS SVTYPE=BND;MATEID=r_0_1 TR:VR 75:13 37:0 chr9 111089672 r_0_1 A A]chr1:7710694] . PASS SVTYPE=BND;MATEID=r_0_0 TR:VR 75:13 37:0 chr10 18927723 r_54_0 A [chr6:39677520[T . Too_low_VAF SVTYPE=BND;MATEID=r_54_1 TR:VR 88:3 42:1 chr6 39677520 r_54_1 T [chr10:18927723[T . Too_low_VAF SVTYPE=BND;MATEID=r_54_0 TR:VR 88:3 42:1 chr10 73413302 r_59 A . PASS END=73447350;SVTYPE=DUP;SVLEN=34048 TR:VR 55:8 25:0 chr11 509067 r_68_0 G [chr7:135879494[CTTTTTA . PASS SVTYPE=BND;MATEID=r_68_1;SVINSLEN=6;SVINSSEQ=CTTTTT TR:VR 95:11 26:0 chr7 135879494 r_68_1 A [chr11:509067[AAAAAGA . PASS SVTYPE=BND;MATEID=r_68_0;SVINSLEN=6;SVINSSEQ=AAAAAG TR:VR 95:11 26:0 chr12 1725510 r_106_0 T T]chr19:48456260] . PASS SVTYPE=BND;MATEID=r_106_1 TR:VR 76:17 29:0 chr19 48456260 r_106_1 C C]chr12:1725510] . PASS SVTYPE=BND;MATEID=r_106_0 TR:VR 76:17 29:0 chr12 6195300 d_339 G . PASS END=6206988;SVTYPE=DEL;SVLEN=-11688 TR:VR 22:9 28:0 chr13 32031218 r_142_0 G [chr13:32671861[T . PASS SVTYPE=BND;MATEID=r_142_1 TR:VR 89:7 46:0 chr13 32671861 r_142_1 T [chr13:32031218[T . PASS SVTYPE=BND;MATEID=r_142_0 TR:VR 89:7 46:0 chr14 32077795 d_436 C . PASS END=32078069;SVTYPE=DEL;SVLEN=-274 TR:VR 18:5 11:0 chr16 11904789 r_202 C . PASS END=12023339;SVTYPE=DUP;SVLEN=118550 TR:VR 68:13 39:0 chr17 69284963 r_241_0 A ]chr4:103974517]G . PASS SVTYPE=BND;MATEID=r_241_1 TR:VR 66:14 33:0 chr4 103974517 r_241_1 G G[chr17:69284963[ . PASS SVTYPE=BND;MATEID=r_241_0 TR:VR 66:14 33:0 chr19 11826495 d_897 C . Too_small_size END=11826530;SVTYPE=DEL;SVLEN=-35 TR:VR 25:11 13:0 chr2 128675740 d_1084 T . Too_small_size END=128675778;SVTYPE=DEL;SVLEN=-38 TR:VR 33:9 18:0 chr2 225552310 r_313_0 A ]chr9:115282900]CT . PASS SVTYPE=BND;MATEID=r_313_1;SVINSLEN=1;SVINSSEQ=C TR:VR 79:8 29:0 chr9 115282900 r_313_1 T TG[chr2:225552310[ . PASS SVTYPE=BND;MATEID=r_313_0;SVINSLEN=1;SVINSSEQ=G TR:VR 79:8 29:0 chr21 46333270 r_346 A . PASS END=46401134;SVTYPE=DUP;SVLEN=67864;SVINSLEN=136;SVINSSEQ=GTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCTGAGATTGTGCCACTGCACTCCAGCCTGGGTGACAGAGTGAGACTTCGTCTCAAAAAAGACAAAAAAG TR:VR 83:12 20:0 chr22 36628067 d_1280 C . PASS END=36629057;SVTYPE=DEL;SVLEN=-990 TR:VR 41:9 22:0 chr4 120243183 d_1480 G . Too_small_size END=120243222;SVTYPE=DEL;SVLEN=-39 TR:VR 24:16 20:0 chr6 35756144 d_1628 G . PASS END=35756290;SVTYPE=DEL;SVLEN=-146 TR:VR 55:17 19:0 chr7 71680881 i_1198 T . PASS END=71680881;SVTYPE=INS;SVINSLEN=2968;SVINSSEQ=CCTCCCTCCCTCTCTCCCTACTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCTCCCTCCCTCCCTCCCTGTCTTCCCTCCCTCCCTCTCTCCCTTCCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCCCTGTCTTCCTCCCTCCCTCTCTCTTCCTCCCTCCCTCTCTCTTCCCTCCCTCCCTCTCTCTCTTCCTCCCTCCCTCTCTCCCTTCCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCCCTTCCTCCCTCCCTCTCTCTTCCCTCCCTCCCTCTCTCCCTTCCTCCCTCCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCCCTGTCTTCCTCCCTCCCTCTCCCTTCCTCCCTCCCTCTCTCCCTCCCTCCATCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCTCCCTCCCTCTCTCCTTCCTCCCTCCCTCCCTGCCCTCCCTCCCTCCCTCCCTTCCTCCCTCCCTCCCTCCCTTCCTCCCTCCCTCTCTCTCTCTCTTCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCTTCCTCCCTCTCCTCTCTCCCTTCCTCCCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTGTCTTCCCTCCCTCCCTCTCTTCCCTTCCTCCCTCCCTCCCTCTCTTCCCTCCCTCCCTCTCTCTCCCTTCCTCCCTCCCTCTCTCTCTTCCCTCCCTCCCTGTCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCTCCCTCCCTCTCTCTCTTCCTCCCTCCCTCTCTCTTCCTCCCTCCCTCTCTCTCTCTTCCCTCCCTCCCTCTCTCTCTCTCTTCCTCCCTCCCTCTCTCTTCCTCCCTCCCTCTCCCTTCCTCCCTCCCTCTATCCCTTCCTCCCTCCCTCCCTCCCTTCCTCTCCTCCCCTCTCTCTCTTCCTCCCTCCCTCTCTCTCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTCTCCTTCCCTCCCTCCCTCCCTCCCTCCCTCTCTCTCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCTCTCCCTCCCTCCCTCTCTCCCTTCCCTCCCTCCCTCCCTGTCCTTCCTCCCTCCCTTCCTCCCTCCCTCCCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCTCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCCCTGTCTTCCTCCCTCCCTCTCTCCCTTCCCTCCCTCCCTCCCTGTCTTCCTCCCTCCCTCTCTCCCTCCCTCCCTCCCTCTCTCCCTTCCTCCCTCCTCCCTGTCTTCCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCCCTGTCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCCCTGTCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCTCTTCCTCCCTCCCTGTCTTCCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCCCTCTCTCCCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCTCTCTCTTCCTTCCTCCCTCCCTCTTCTCCCCTCCCTCTCTCTCTTCCTCCCTCCCTCTCTCTCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCCCTGTCTCCCTCCCTCCCTCCCTCTCCCTTCCTCCCTCCCTCTCTCTCTTCCTCCCTCCCTGTCTTCCTCCCTCCCTCTCTCTCCTTCCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCCCTCCCTTCCTCCCTCCCTCTCTCTCTTCCTCCCTCCCTCCCTCCCTTCCTCCCTCCCTCTCTTCCTCCCTCCCTTCTCTCCCTTCCTCCCTCCCTCTCCTCTTCCTCCCTCTCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCTCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCTCCTCTCCCTCCCTGTCTTCCTCCCTCCCTCTCTCCGTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCCCTCCCTTCCTCCCTCCCTCCCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCCCTCCCTTCCTCCCTCCCTCCCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTCTTCCTCCCTCCCTCCCTCTCTCCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCCCTCCCTTCCTCCCTCCCTCCCTCTCTCCTTCCTCCCTCCCTCTCTCCCTTCCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCCCTCTCCCTTCCTCCCTCCCTCTCTCTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCTCTTCCTCCCTCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCTCTCCTTCCTCCCTCCCTCTCTCCCTTCCTTCCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTCTCTTCCCCCCTTCCTTTCTCCCTTTCCTTTCCTGTGTTTCGGACTTTTCAAAAAAAAAAAAAAAAAAAAAAGGGGGGGGTTCCT TR:VR 37:6 20:0 chr8 125997555 d_1875 A . PASS END=125998398;SVTYPE=DEL;SVLEN=-843 TR:VR 78:16 18:0 chr9 135042499 d_1911 G . PASS END=135043257;SVTYPE=DEL;SVLEN=-758 TR:VR 37:8 17:0 chrX 80271952 r_549 A . PASS END=91484238;SVTYPE=DEL;SVLEN=-11212286 TR:VR 80:29 31:0 chr1 7710698 r_1_0 C [chr9:111089674[A . PASS SVTYPE=BND;MATEID=r_1_1 TR:VR 75:15 37:0 chr9 111089674 r_1_1 A [chr1:7710698[A . PASS SVTYPE=BND;MATEID=r_1_0 TR:VR 75:15 37:0 chr12 19575255 d_343 C . PASS END=19575757;SVTYPE=DEL;SVLEN=-502 TR:VR 24:16 16:0 chr13 32473371 d_401 A . PASS END=32474223;SVTYPE=DEL;SVLEN=-852 TR:VR 61:14 20:0 chr17 6991072 r_228 T . PASS END=7071578;SVTYPE=DUP;SVLEN=80506;SVINSLEN=83;SVINSSEQ=AGCCACTGCACCCGGCCCAATTTTTTATTTTTAGTTGAGACGGGGTTTCGCCATGTTGGCCAGGCTGGTCTCGAACTCCTGAC TR:VR 62:13 38:0 chr18 1248793 d_851 C . PASS END=1249984;SVTYPE=DEL;SVLEN=-1191 TR:VR 33:16 20:0 chr19 12895447 d_898 G . PASS END=12898957;SVTYPE=DEL;SVLEN=-3510;SVINSLEN=1;SVINSSEQ=T TR:VR 38:4 15:0 chr19 48566379 d_918 C . PASS END=48566818;SVTYPE=DEL;SVLEN=-439 TR:VR 37:20 13:0 chr2 129512717 d_1085 T . Too_small_size END=129512763;SVTYPE=DEL;SVLEN=-46 TR:VR 32:8 15:0 chr21 46699983 r_347_0 G GTTAGGGTTAGGGTTAGGGTT[chr3:104477641[ . PASS SVTYPE=BND;MATEID=r_347_1;SVINSLEN=20;SVINSSEQ=TTAGGGTTAGGGTTAGGGTT TR:VR 77:21 43:0 chr3 104477641 r_347_1 A ]chr21:46699983]AACCCTAACCCTAACCCTAAA . PASS SVTYPE=BND;MATEID=r_347_0;SVINSLEN=20;SVINSSEQ=AACCCTAACCCTAACCCTAA TR:VR 77:21 43:0 chr4 54325461 i_969 C . PASS END=54325462;SVTYPE=INS;SVINSLEN=97;SVINSSEQ=CGGGCGGGGGCTGACCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCG TR:VR 42:3 18:0 chr5 165921053 d_1590 C . PASS END=165921165;SVTYPE=DEL;SVLEN=-112 TR:VR 23:3 22:0 chr6 36371873 d_1629 C . Too_small_size END=36371910;SVTYPE=DEL;SVLEN=-37 TR:VR 34:8 18:0 chr7 45238893 r_468 A . PASS END=45295935;SVTYPE=DUP;SVLEN=57042 TR:VR 93:15 22:0 chr8 126408759 r_509 T . PASS END=127508214;SVTYPE=DEL;SVLEN=-1099455 TR:VR 138:16 39:0 chr9 135096017 i_1390 A . PASS END=135096029;SVTYPE=INS;SVINSLEN=240;SVINSSEQ=CCTTCCTCCTCCTCTCCCTTCTCTTCCTTGTCCTCCCCCTCCTCTTCCCCTCTCCTCCTCCTCCTCATTCCTCCCCCACCTTGTCTTCTTCCCCTTTCTCCTCCTCATCGCCCCTCCTTCCTCCCTCTCCCCTTCCTCTTCCTCCTTCCTTCCCCCTCTCCCCCCCTCTTCATCCTCCTCTTCCTCCTCCCCCTCTTCATCCTCCTCTTCCTCCTCCCCTCTCCTCCCCTTCCTCCTCCT TR:VR 34:5 19:0 chr1 165769080 r_37 C . PASS END=165779263;SVTYPE=DUP;SVLEN=10183 TR:VR 45:14 17:0 chr1 77950263 r_17_0 G [chr1:88080059[C . PASS SVTYPE=BND;MATEID=r_17_1 TR:VR 71:17 38:0 chr1 88080059 r_17_1 C [chr1:77950263[C . PASS SVTYPE=BND;MATEID=r_17_0 TR:VR 71:17 38:0 chr10 33667214 d_218 G . PASS END=33668437;SVTYPE=DEL;SVLEN=-1223 TR:VR 20:12 16:0 chr12 19755086 r_110_0 A [chr12:56749502[C . PASS SVTYPE=BND;MATEID=r_110_1 TR:VR 75:28 31:0 chr12 56749502 r_110_1 C [chr12:19755086[C . PASS SVTYPE=BND;MATEID=r_110_0 TR:VR 75:28 31:0 chr13 32671701 r_143_0 A A]chr13:32802620] . PASS SVTYPE=BND;MATEID=r_143_1 TR:VR 89:14 49:0 chr13 32802620 r_143_1 T T]chr13:32671701] . PASS SVTYPE=BND;MATEID=r_143_0 TR:VR 89:14 49:0 chr15 20395339 r_176_0 A [chr7:144580356[C . Too_low_VAF SVTYPE=BND;MATEID=r_176_1 TR:VR 226:7 116:0 chr7 144580356 r_176_1 C [chr15:20395339[C . Too_low_VAF SVTYPE=BND;MATEID=r_176_0 TR:VR 226:7 116:0 chr16 14803629 d_619 T . Too_small_size END=14803670;SVTYPE=DEL;SVLEN=-41 TR:VR 20:10 18:0 chr2 73545173 r_279 T . PASS END=73904005;SVTYPE=DUP;SVLEN=358832 TR:VR 88:16 37:0 chr22 41303399 d_1281 G . PASS END=41303570;SVTYPE=DEL;SVLEN=-171 TR:VR 26:19 19:0 chr4 133572925 d_1481 C . PASS END=133572997;SVTYPE=DEL;SVLEN=-72 TR:VR 28:14 22:0 chr4 189836763 i_1009 C . PASS END=189836763;SVTYPE=INS;SVINSLEN=218;SVINSSEQ=ACACACTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATCCCCACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACACACACACACACACACACACACACACACACACACACAC TR:VR 143:30 14:0 chr4 55217398 d_1450 C . Too_small_size END=55217433;SVTYPE=DEL;SVLEN=-35 TR:VR 42:8 31:0 chr5 57348555 d_1570 C . Too_small_size END=57348591;SVTYPE=DEL;SVLEN=-36 TR:VR 22:7 19:0 chr6 164202236 d_1665 G . PASS END=164202317;SVTYPE=DEL;SVLEN=-81 TR:VR 20:12 16:0 chr6 37088526 d_1630 C . PASS END=37096027;SVTYPE=DEL;SVLEN=-7501 TR:VR 59:12 24:0 chr7 46718978 r_469 A . PASS END=46719853;SVTYPE=DUP;SVLEN=875 TR:VR 41:6 15:0 chr7 71680788 i_1200 C . PASS END=71680788;SVTYPE=INS;SVINSLEN=3165;SVINSSEQ=TCCCTCCCTCTCTCCCTTCCTCCCCTCCCCCTCTCCCTTCCTCCCTCCCCCTCTCTCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCCTCCCTCCCTCCCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCCCTTCCTCCCTCCCTCTCTCCCTTCCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCCCTGTCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCCCTGTCTTCCTCCCTCCCTCTCTCCCTCCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCCTCTCCTCTCTCCCTCCTCCCTCCCTCCCTGTCTTCCTCCCTCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCCCTCCTCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCTCCCTGTCTTCCTCCCTCCCTCTCTCTCTTCCTCCCTCCCTCTCTCTCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCTCTCTCTCTCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTGTCTTCCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCTCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCTCTTCCTCCCTCCCTCTCTCCCTTCCTTCCTCCCTCCTCTCTCTCCCTTCCTCCCTCCCTCCCTGTCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTATCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCTCTTCCTCCCTCCCTCTCTCTCTTCCTTCCTCCCTCCCTGTCTTCCTCCCTCCCTTCCCTCCCTTCCTCCCTCCCTCTCCTCCTCCCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCTCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCTCTCCTCCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCCCTGTCTTCCTCCCTCCCTCTCTCTCTTCCTCCCTCCCTCTCTCTTCCTCCCTCCTCTCTCCCTTCCTCCCTCCCTCTCTCTCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCCCTGTCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCTCTTCCTCCCTCCCTCTCTCTCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTGTCTTCCTCCCTCCCTCTCTCTCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCCCTCCTCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCCCTGTCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCTCCCTTCCTCCCTCCCTCTCTGTCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCCCTGTCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCTCTTCCTCCCTCCCTGTCTTCCTCCCTCCTCTCTCTCCCTTCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCCCTCCCTTCCTCCCTCCCTCTCTCTCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCTCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCTCTTCCTCCCTCCCTCTCTCTCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCCCTGTCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCCTCTCTCCCTTCCTCCCTCCCTCTCTCTCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCTCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCCCTGTCTCCCTCCTCCCTCCCTCCCTCCCTTCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTGTCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCCCTCTCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCCCTCCCTTCCTCCCTCCCTCTCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCCTCCCTCCCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCTCTTCCTTCCTCCCTCCCTCCCTCCTCTCTCTTCCTCCCTCCCTCTCTCCCTCCCTCCCTCCCTTCCTCCCTCCTCTTCCTTCCTCCCTCCCTCTCTTCTCCCCTCCTCTCTCCCTTCCTCCCTCCCTTCTCTCTTCCTCCCTCTCCTCTCTTCCTTCCTCCCTTCTCTTCCTTTTCCTTCCTCTCTTCTTCCTTCCTTC TR:VR 38:8 20:0 chr8 126499767 r_510 C . PASS END=127771589;SVTYPE=DUP;SVLEN=1271822 TR:VR 152:9 32:0 chr1 168152229 d_177 G . PASS END=168152293;SVTYPE=DEL;SVLEN=-64 TR:VR 27:8 27:0 chr1 77979342 r_18_0 T T]chr1:88100799] . PASS SVTYPE=BND;MATEID=r_18_1 TR:VR 48:11 35:0 chr1 88100799 r_18_1 A A]chr1:77979342] . PASS SVTYPE=BND;MATEID=r_18_0 TR:VR 48:11 35:0 chr11 54807461 r_82_0 T [chr11:54808308[T . PASS SVTYPE=BND;MATEID=r_82_1 TR:VR 41:4 10:0 chr11 54808308 r_82_1 T [chr11:54807461[T . PASS SVTYPE=BND;MATEID=r_82_0 TR:VR 41:4 10:0 chr12 19827220 d_344 T . PASS END=19827268;SVTYPE=DEL;SVLEN=-48 TR:VR 66:4 15:0 chr12 64109488 r_121 C . PASS END=64370887;SVTYPE=DUP;SVLEN=261399 TR:VR 133:23 34:0 chr13 33014428 d_402 T . PASS END=33014503;SVTYPE=DEL;SVLEN=-75 TR:VR 36:17 20:0 chr15 20531794 r_177_0 A A]chr15:20532372] . Too_low_VAF SVTYPE=BND;MATEID=r_177_1 TR:VR 75:3 49:0 chr15 20532372 r_177_1 T T]chr15:20531794] . Too_low_VAF SVTYPE=BND;MATEID=r_177_0 TR:VR 75:3 49:0 chr19 50471642 i_517 A . Too_small_size END=50471642;SVTYPE=INS;SVINSLEN=49;SVINSSEQ=TATACGCATACATGCACGTGTGTGTATACGCATACATGCACGTGTGTGT TR:VR 38:3 9:0 chr2 131844960 d_1086 G . PASS END=131845039;SVTYPE=DEL;SVLEN=-79 TR:VR 29:11 12:0 chr2 227247963 r_314 G . PASS END=227317020;SVTYPE=DUP;SVLEN=69057 TR:VR 87:14 35:0 chr2 91522513 d_1067 G . Too_low_VAF END=91522896;SVTYPE=DEL;SVLEN=-383;SVINSLEN=15;SVINSSEQ=CCTGGCTGGCTTGTG TR:VR 195:4 85:0 chr3 114043335 r_362 A . PASS END=135554664;SVTYPE=DEL;SVLEN=-21511329 TR:VR 78:11 30:0 chr6 16426924 r_429 A . PASS END=16950338;SVTYPE=DUP;SVLEN=523414 TR:VR 121:15 34:0 chr7 49177322 r_470 A . PASS END=51455818;SVTYPE=DUP;SVLEN=2278496 TR:VR 97:14 23:0 chr7 73420757 i_1201 T . PASS END=73420767;SVTYPE=INS;SVINSLEN=134;SVINSSEQ=TAGCAAAAATTTAAATTAATTATGAATAAGTAAAAATGACATGTATTTCTTTTAGAAGGGGTGATCTTAAAAAAATTAAGCACATGAGGCCAGGTGTGGTGGCTCATACCTGTAATTCCAGAGCTTTGGAATTA TR:VR 57:15 15:0 chr8 58356490 d_1836 C . Too_small_size;Too_low_VAF END=58356530;SVTYPE=DEL;SVLEN=-40 TR:VR 86:4 16:0 chr9 136431725 i_1392 C . PASS END=136431725;SVTYPE=INS;SVINSLEN=132;SVINSSEQ=CGCCCCCAGGCCCTCACCTCTCCTCATCTCCCTCCCCGCCCGCCCCCCCCAGGCCCTCACCTCTCTCATCTCCCTCCGCTCCCTTCCCCAGGCCCTCCAGCTTCCTCATCTCTCCCTCCACGCCCTCCCTTC TR:VR 29:3 16:0 chr1 168925419 r_38 G . PASS END=168943579;SVTYPE=DUP;SVLEN=18160 TR:VR 42:3 28:0 chr10 36623224 d_219 C . PASS END=36623273;SVTYPE=DEL;SVLEN=-49 TR:VR 27:14 18:0 chr11 54828088 r_83_0 T T[chr16:69959104[ . Too_low_VAF SVTYPE=BND;MATEID=r_83_1 TR:VR 86:3 37:0 chr16 69959104 r_83_1 T ]chr11:54828088]T . Too_low_VAF SVTYPE=BND;MATEID=r_83_0 TR:VR 86:3 37:0 chr12 20140120 d_345 T . PASS END=20141026;SVTYPE=DEL;SVLEN=-906 TR:VR 42:10 19:0 chr14 43452311 d_438 G . PASS END=43452472;SVTYPE=DEL;SVLEN=-161 TR:VR 18:3 17:0 chr19 50481866 r_269 C . PASS END=54611270;SVTYPE=DEL;SVLEN=-4129404 TR:VR 60:8 28:0 chr3 11531911 d_1327 A . PASS END=11531961;SVTYPE=DEL;SVLEN=-50 TR:VR 31:24 20:0 chr4 56444178 d_1451 G . PASS END=56444391;SVTYPE=DEL;SVLEN=-213 TR:VR 45:11 19:0 chr5 6078448 d_1533 T . PASS END=6078525;SVTYPE=DEL;SVLEN=-77 TR:VR 41:6 18:0 chr6 41772515 d_1632 C . PASS END=41772827;SVTYPE=DEL;SVLEN=-312 TR:VR 57:18 19:0 chr8 60639185 r_497 G . PASS END=95982770;SVTYPE=DEL;SVLEN=-35343585 TR:VR 161:29 40:0 chrX 32252891 d_2046 T . Too_small_size END=32252852;SVTYPE=INS;SVINSLEN=49;SVINSSEQ=ATATAAATATATATAAATATATATAAATATATATATAAATATATATAAG TR:VR 41:3 16:0 chrX 8426926 d_2040 C . PASS END=8427664;SVTYPE=DEL;SVLEN=-738 TR:VR 38:12 24:0 chr1 84463812 r_20 T . PASS END=93483925;SVTYPE=DEL;SVLEN=-9020113;SVINSLEN=20;SVINSSEQ=AAACTGAAGAAGAAAGCCAA TR:VR 44:15 30:0 chr10 73787674 r_60 A . PASS END=74008321;SVTYPE=DUP;SVLEN=220647 TR:VR 54:5 23:0 chr11 55138868 d_309 C . PASS END=55139069;SVTYPE=DEL;SVLEN=-201;SVINSLEN=132;SVINSSEQ=TCTAGTTTTTATGTGAATATACTTGTTTTTCACCATAGGCCTCAAACTGCTCACAAATATTCCTTTGCAGATTCTACAAAAAGACTTTTTCCAAACTGATCAGTCAAATCAAATGTTCAACACTGTGAGATC TR:VR 51:3 19:0 chr12 2236982 d_334 G . PASS END=2237044;SVTYPE=DEL;SVLEN=-62 TR:VR 26:7 17:0 chr13 34572671 i_197 G . PASS END=34572684;SVTYPE=INS;SVINSLEN=594;SVINSSEQ=TGCACCTCCCCGCGTCCCCGGCACCCTGACCTGCGGGGCCGGCCGCTCTCGTCGGGGGGCAGGACGGTGACGCAGACCTTGGGCGCCGAGCGCAGGAGCTGGGCAGCGGCCTCGGGCCGGAGGCTGGGCAGCGTCTGGCCGCACACGCGCAGGAGGCGCGCCCCGGGCCGCAGCCCCGCCGTCTCGGCGAATGTGAAGCGCTCCACGTGCGTGACGAATCCCTCGGCGTCCACCTCGAAGCCCAGGCGGCCTTGACCGTCGCGGGGCAGCGCCAGCTCGCGGGTCTCGCAGCCACGGCTCACCAGCTGCGGACGGGGCGGGACGAGTGGGCGGGGCTGCCGGGAGGTGGGGCCGCCCCAGCGCCCGCCCCCTGGACTGCGTCCCAGGCCACACGGAACTTTCCACAGTCCCCGAGGGCCGCGTGTGCCACCGCCCGAGGGATGAAGACCATAAGTCGCTTACCCGAGGGCACCAGTTCCGGCCTTGCCAAGCCCCGGGGCTGGCTCTGCCCTCCTCGACTTTCCCTTCCGCAGGAGTAGGGGACAAAGGCGGCGGGAGGGAGGGGTCCAAAGCAGGCTCCGCCCCGCCGCGCGC TR:VR 43:14 14:0 chr14 53952403 d_439 A . PASS END=53953673;SVTYPE=DEL;SVLEN=-1270 TR:VR 34:15 14:0 chr17 71304621 r_242 A . PASS END=71308548;SVTYPE=DEL;SVLEN=-3927;SVINSLEN=2;SVINSSEQ=TC TR:VR 38:9 18:0 chr19 5062966 d_892 T . PASS END=5063033;SVTYPE=DEL;SVLEN=-67 TR:VR 25:18 19:0 chr4 138159414 d_1482 A . PASS END=138160485;SVTYPE=DEL;SVLEN=-1071 TR:VR 25:16 25:0 chr5 100728131 i_1061 T . PASS END=100728131;SVTYPE=INS;SVINSLEN=97;SVINSSEQ=GTGTATACATATATAAATATAAATATTATATATATAATATAAAATTATGTACATAATACATATACATGTATATATATATTTCATAGCGCAGTTAACA TR:VR 25:14 19:0 chr7 121184829 d_1755 C . PASS END=121184957;SVTYPE=DEL;SVLEN=-128 TR:VR 46:14 19:0 chr7 156505250 d_1787 G . PASS END=156505481;SVTYPE=DEL;SVLEN=-231 TR:VR 62:14 19:0 chr7 506313 r_456 T . PASS END=542401;SVTYPE=DUP;SVLEN=36088 TR:VR 85:8 29:0 chr8 129297205 d_1876 A . PASS END=129297254;SVTYPE=DEL;SVLEN=-49 TR:VR 63:14 14:0 chr8 61008453 d_1837 T . PASS END=61008523;SVTYPE=DEL;SVLEN=-70 TR:VR 38:21 15:0 chrUn_KI270757v1 16071 i_1459 G . Too_low_VAF END=16071;SVTYPE=INS;SVINSLEN=58;SVINSSEQ=GGTGGAGTTGAATTGGAGTGGAGTGGAATGGAGTGGAATGGAGTGCAGTGGAGTGGAA TR:VR 170:4 80:1 chrX 8579776 d_2041 C . Too_small_size END=8579815;SVTYPE=DEL;SVLEN=-39 TR:VR 36:16 21:0 chr1 84463814 r_21 G . PASS END=93483923;SVTYPE=DUP;SVLEN=9020109;SVINSLEN=4;SVINSSEQ=CACA TR:VR 44:18 30:0 chr10 76027033 r_61 T . PASS END=93535776;SVTYPE=DEL;SVLEN=-17508743 TR:VR 48:6 35:0 chr12 22786398 d_346 C . PASS END=22786449;SVTYPE=DEL;SVLEN=-51 TR:VR 50:15 9:0 chr12 64703610 d_377 C . PASS END=64704019;SVTYPE=DEL;SVLEN=-409;SVINSLEN=2;SVINSSEQ=TG TR:VR 49:13 17:0 chr13 37617300 d_403 A . PASS END=37617691;SVTYPE=DEL;SVLEN=-391 TR:VR 52:17 15:0 chr16 24796487 r_204 G . PASS END=24841887;SVTYPE=DUP;SVLEN=45400 TR:VR 55:16 24:0 chr2 133469710 r_291_0 C [chr7:84889233[A . PASS SVTYPE=BND;MATEID=r_291_1 TR:VR 59:3 29:0 chr7 84889233 r_291_1 A [chr2:133469710[A . PASS SVTYPE=BND;MATEID=r_291_0 TR:VR 59:3 29:0 chr3 120092811 r_363 G . PASS END=120111134;SVTYPE=DUP;SVLEN=18323 TR:VR 46:9 23:0 chr7 51596530 d_1716 A . PASS END=51596858;SVTYPE=DEL;SVLEN=-328 TR:VR 42:6 12:0 chr8 63215155 r_498 T . PASS END=63229940;SVTYPE=DUP;SVLEN=14785 TR:VR 85:10 18:0 chr1 178653664 r_40_0 A [chr6:7308197[T . PASS SVTYPE=BND;MATEID=r_40_1 TR:VR 85:8 29:0 chr6 7308197 r_40_1 T [chr1:178653664[T . PASS SVTYPE=BND;MATEID=r_40_0 TR:VR 85:8 29:0 chr1 8483274 r_2_0 G G]chr8:113174472] . Too_low_VAF SVTYPE=BND;MATEID=r_2_1 TR:VR 124:3 34:0 chr8 113174472 r_2_1 C C]chr1:8483274] . Too_low_VAF SVTYPE=BND;MATEID=r_2_0 TR:VR 124:3 34:0 chr10 38678752 r_55_0 T T]chr10:42220185] . Too_low_VAF SVTYPE=BND;MATEID=r_55_1 TR:VR 101:4 59:0 chr10 42220185 r_55_1 G G]chr10:38678752] . Too_low_VAF SVTYPE=BND;MATEID=r_55_0 TR:VR 101:4 59:0 chr12 24042416 r_111 C . PASS END=24619681;SVTYPE=DUP;SVLEN=577265 TR:VR 136:11 39:0 chr16 26373126 r_205_0 T [chr16:26380659[A . PASS SVTYPE=BND;MATEID=r_205_1 TR:VR 46:11 22:0 chr16 26380659 r_205_1 A [chr16:26373126[A . PASS SVTYPE=BND;MATEID=r_205_0 TR:VR 46:11 22:0 chr17 71752612 r_243 T . PASS END=72297048;SVTYPE=DUP;SVLEN=544436 TR:VR 105:30 31:0 chr18 21545954 d_858 G . PASS END=21546094;SVTYPE=DEL;SVLEN=-140 TR:VR 26:17 17:0 chr19 16826577 d_899 G . Too_small_size END=16826612;SVTYPE=DEL;SVLEN=-35 TR:VR 32:13 10:0 chr2 94170513 i_653 A . Too_low_VAF END=94170514;SVTYPE=INS;SVINSLEN=174;SVINSSEQ=CGCCTTTTGTCATATCTGGAAGTTGTCCATTTGGAGCGCATTCCGGCTTGTGTTGAAAAAGGAAATATCCTCCCATAAAAACTAGATAGAAGCATTCTGAGAAACTTATTTGTGATGTGTGTACTCAACTAACAGTGTTGAACCTTTCTGTTGATAGAGCAGCTTTGATACACT TR:VR 111:3 39:1 chr3 125283255 d_1346 T . Too_small_size END=125283290;SVTYPE=DEL;SVLEN=-35 TR:VR 18:8 17:0 chr5 102545773 r_410 T . PASS END=160891809;SVTYPE=DEL;SVLEN=-58346036 TR:VR 67:11 35:0 chr7 122742431 d_1757 T . PASS END=122742523;SVTYPE=DEL;SVLEN=-92;SVINSLEN=7;SVINSSEQ=GCCCTTT TR:VR 51:6 23:0 chr7 52954498 d_1717 C . PASS END=52954947;SVTYPE=DEL;SVLEN=-449 TR:VR 27:12 18:0 chr9 13685658 d_1890 T . PASS END=13685747;SVTYPE=DEL;SVLEN=-89 TR:VR 28:17 13:0 chrUn_KI270757v1 16352 i_1461 A . Too_low_VAF END=16352;SVTYPE=INS;SVINSLEN=104;SVINSSEQ=GCCAAGAACGTTATTGCACTCCTGTCAGGGTGACAGAGTGATGATGACCAGTTGAAATAATGGAATGGAATGGAATGGATTAGAATGGAATGGAATGCAGTGGA TR:VR 171:3 82:1 chrX 87281467 r_550 G . PASS END=87323264;SVTYPE=DEL;SVLEN=-41797 TR:VR 38:16 34:0 chr11 57897050 d_312 G . PASS END=57897791;SVTYPE=DEL;SVLEN=-741 TR:VR 38:5 17:0 chr12 70664758 r_123 G . PASS END=93761559;SVTYPE=DEL;SVLEN=-23096801 TR:VR 89:12 40:0 chr13 39257175 r_144_0 G G]chr2:9042373] . PASS SVTYPE=BND;MATEID=r_144_1 TR:VR 79:17 33:0 chr2 9042373 r_144_1 C C]chr13:39257175] . PASS SVTYPE=BND;MATEID=r_144_0 TR:VR 79:17 33:0 chr14 61987282 r_160_0 A ]chr8:128991729]C . PASS SVTYPE=BND;MATEID=r_160_1 TR:VR 111:20 33:0 chr8 128991729 r_160_1 C C[chr14:61987282[ . PASS SVTYPE=BND;MATEID=r_160_0 TR:VR 111:20 33:0 chr16 26600079 r_206_0 G G[chr7:144707350[ . PASS SVTYPE=BND;MATEID=r_206_1 TR:VR 112:14 37:0 chr7 144707350 r_206_1 T ]chr16:26600079]T . PASS SVTYPE=BND;MATEID=r_206_0 TR:VR 112:14 37:0 chr17 71934224 r_244 A . PASS END=72137782;SVTYPE=DUP;SVLEN=203558;SVINSLEN=1;SVINSSEQ=T TR:VR 147:18 31:0 chr18 21704917 r_249 G . PASS END=38503852;SVTYPE=DUP;SVLEN=16798935 TR:VR 60:13 28:0 chr19 17599277 r_261 T . PASS END=17626460;SVTYPE=DUP;SVLEN=27183 TR:VR 50:5 24:0 chr5 106014623 d_1576 A . Too_small_size END=106014669;SVTYPE=DEL;SVLEN=-46 TR:VR 17:7 13:0 chr5 176247099 d_1592 T . PASS END=176247273;SVTYPE=DEL;SVLEN=-174 TR:VR 27:14 14:0 chr6 42682014 d_1633 C . Too_small_size END=42682053;SVTYPE=DEL;SVLEN=-39 TR:VR 49:34 18:0 chr7 124573569 d_1758 T . PASS END=124573805;SVTYPE=DEL;SVLEN=-236 TR:VR 50:7 17:0 chr8 64628899 r_499 A . PASS END=64684779;SVTYPE=DUP;SVLEN=55880 TR:VR 93:6 42:0 chr1 87833602 d_31 T . PASS END=87834450;SVTYPE=DEL;SVLEN=-848 TR:VR 27:9 20:0 chr10 82381381 d_259 G . PASS END=82381833;SVTYPE=DEL;SVLEN=-452 TR:VR 29:13 17:0 chr13 39257185 r_145_0 C [chr2:9042380[T . PASS SVTYPE=BND;MATEID=r_145_1 TR:VR 79:15 33:0 chr2 9042380 r_145_1 T [chr13:39257185[T . PASS SVTYPE=BND;MATEID=r_145_0 TR:VR 79:15 33:0 chr14 61987280 r_161_0 G G[chr8:128991738[ . PASS SVTYPE=BND;MATEID=r_161_1 TR:VR 111:13 33:0 chr8 128991738 r_161_1 C ]chr14:61987280]C . PASS SVTYPE=BND;MATEID=r_161_0 TR:VR 111:13 33:0 chr14_GL000225v1_random 27310 i_238 G . Too_low_VAF END=27310;SVTYPE=INS;SVINSLEN=484;SVINSSEQ=TAACCCTGGTCTACGATATACCTAAGGGCATATCGTGACATAAATCTGCACTGATCATCCAGGTGATGGGGCTTTTGTCTAGGCACTGCCTAAGGGTGCATTGTGACAGAGACTCCTGCACTGATCACTCAGGTGATGTCTCTGTTGTATAAGCTCTTCGTACAGGGGAATTGTGAGAGATCTCGCCACTGATCACGGAAATGTTGAAACTGTTTAAGTCTAAGCTTTGCCTACAGGGGACTTTGTGACATGCTTTTTGCACTGATCACCCAGGTGACATAGCTCATCTAGGTTCTGAATACAGGTGTTTTGTGACATATCTCTTCACTGATCACTTAGGTGTTGTAACACTTTTATAAGCACTGCCTCTACAGGGAATTTTGACAAATCTCTGCACTGATCACCTAGGTGATGTAACCTTGTCTACCCTCTGCCCAAAGGGGGCATTATAAAATATCTCTGCACTGATCACCCAAGGTGATTC TR:VR 169:8 81:1 chr17 75163541 d_780 G . PASS END=75163628;SVTYPE=DEL;SVLEN=-87 TR:VR 36:28 11:0 chr19 18781711 r_262 C . PASS END=18880143;SVTYPE=DUP;SVLEN=98432 TR:VR 73:8 46:0 chr2 74969128 r_280 C . PASS END=74982755;SVTYPE=DUP;SVLEN=13627;SVINSLEN=3;SVINSSEQ=ATG TR:VR 58:5 27:0 chr21 8219878 r_338_0 A [chr4:75249619[T . Too_low_VAF SVTYPE=BND;MATEID=r_338_1 TR:VR 546:5 504:0 chr4 75249619 r_338_1 T [chr21:8219878[T . Too_low_VAF SVTYPE=BND;MATEID=r_338_0 TR:VR 546:5 504:0 chr22 47417398 d_1284 G . Too_small_size END=47417435;SVTYPE=DEL;SVLEN=-37 TR:VR 30:11 23:0 chr3 130847206 d_1347 G . Too_small_size END=130847248;SVTYPE=DEL;SVLEN=-42 TR:VR 35:3 15:0 chr4 1937842 r_374_0 C C[chr6:16171628[ . PASS SVTYPE=BND;MATEID=r_374_1 TR:VR 89:13 39:0 chr6 16171628 r_374_1 A ]chr4:1937842]A . PASS SVTYPE=BND;MATEID=r_374_0 TR:VR 89:13 39:0 chr5 177962739 i_1074 G . PASS END=177962739;SVTYPE=INS;SVINSLEN=313;SVINSSEQ=GAGGGAGCGTGGCAGAGGGAACGATGGCCGTGGTGACACTGAGGAGGGAGCGTGGCAGAGGGAACGATGGCCATGGTGACACTGAGGAGGGAGCGTGGCAGAGGGAACGATGGCCATGGCTGACACTGAGGAGGGAGCGTGGCAGAGGGAACGATGGCCGTGGTGACACTGAGGAGGGAGCGTGGCAGAGGGAACGATGGCCGTGGTGACACTGAGGAGGGAGCGTGGCAGAGGGAACGATGGCCGTGGTGACACTGAGGAGGGAGCGTGGCAAGAGGAACGATGGCCATTTTTATTATATCGGGTTTTTTTT TR:VR 23:6 18:0 chr7 127696887 d_1759 A . PASS END=127697009;SVTYPE=DEL;SVLEN=-122 TR:VR 61:4 15:0 chr8 67083503 d_1838 G . PASS END=67083676;SVTYPE=DEL;SVLEN=-173 TR:VR 53:8 14:0 chr9 137260120 r_529 G . PASS END=137611760;SVTYPE=DUP;SVLEN=351640 TR:VR 64:8 39:0 chr1 8872637 r_3_0 C C[chrUn_GL000224v1:3790[ . Too_low_VAF SVTYPE=BND;MATEID=r_3_1 TR:VR 521:10 317:0 chrUn_GL000224v1 3790 r_3_1 C ]chr1:8872637]C . Too_low_VAF SVTYPE=BND;MATEID=r_3_0 TR:VR 521:10 317:0 chr10 85195247 d_260 G . PASS END=85195395;SVTYPE=DEL;SVLEN=-148;SVINSLEN=17;SVINSSEQ=TCACAAATAGATTCTAT TR:VR 29:14 18:0 chr12 29381946 d_347 C . Too_small_size END=29381981;SVTYPE=DEL;SVLEN=-35 TR:VR 57:8 14:0 chr12 72423136 d_378 C . PASS END=72423419;SVTYPE=DEL;SVLEN=-283 TR:VR 39:11 17:0 chr13 39795817 r_146 T . PASS END=39802511;SVTYPE=DUP;SVLEN=6694 TR:VR 38:3 19:0 chr14 63663652 d_442 T . Too_small_size END=63663693;SVTYPE=DEL;SVLEN=-41 TR:VR 28:11 12:0 chr17 76393489 d_781 T . PASS END=76401913;SVTYPE=DEL;SVLEN=-8424;SVINSLEN=2;SVINSSEQ=TT TR:VR 31:10 19:0 chr2 137919639 d_1087 T . Too_small_size END=137919682;SVTYPE=DEL;SVLEN=-43 TR:VR 24:15 13:0 chr2 76019394 d_948 C . PASS END=76020494;SVTYPE=DEL;SVLEN=-1100 TR:VR 47:16 17:0 chr20 11247001 d_1134 T . PASS END=11247152;SVTYPE=DEL;SVLEN=-151 TR:VR 53:27 21:0 chr4 19382561 d_1417 T . PASS END=19382610;SVTYPE=DEL;SVLEN=-49 TR:VR 51:10 25:0 chr7 128917168 i_1213 C . PASS END=128917180;SVTYPE=INS;SVINSLEN=850;SVINSSEQ=TTTATAGATATATGTATATATGAATATCTATATAAGTTTACACATTTATTTACTTGCAGAACTATTTGAAAATAAGTTTTAGATAAGACCTTTCACTCCTAAGTGAAGGCATTCCTAAAGAATAAAGGCATTTTCTTTCATAACCATGATACCCTTATTATATGCAAGCAAATTAACAAAAATTCTATAATAATTCAAATTTCTGCCATTGTCACAAAACTATTTGTAGTAAGCAGAATAATGCTTCCCCTGTACCCAAAGGTAGCCATGTCTTAATCCTCTGAACCTCTGACTATCTTATCTTACATGGCAAAGGGGAATTAAGGTTGCTCATCAACTGACCTTAAAATAGTGAGATTATACTGGATTATCTGGTGGGCCCAGTGTTATCACAAGGGTCCTTAAAAGTGGATGATAGAGGCAGAAAAACAGAGTTAGAGGGAAACGTGACTATGGGAGAAAGGCACAGAGAGAGACAGTGTTGCTGGATTTGAAAATGGAAGAATACAAGCCAAGGAATGTCAGTGGCCTCTGGAAAAGAGACTGGAAAGGACAAGGAAATGGATTCTCTCATATACCTTTCAGAAAGGAACCTATCCCTGCTGAAACCTCGATTTTAATCCAGTAAGACCTATTTTGGACTTCTGACCTATAGAATTATAAGATAATAAACTTGTATGATTTTAAGCCACCAAATTTGTGGTGACTTGTTACACAGTCACTTATTACAGCAGCAATAGAAAATGAATACACTGTTTTTTATAGCTTTATTTTTTTTCTCCCCAAACTAGGATCCAGTCAATGTTCACACCTTGTGTTTAGTTGCTTGTTATCTTTGGTTGTTTTTTCC TR:VR 48:27 17:0 chr8 130270604 d_1878 C . PASS END=130270680;SVTYPE=DEL;SVLEN=-76 TR:VR 94:22 17:0 chr1 189464736 d_178 T . PASS END=189464815;SVTYPE=DEL;SVLEN=-79;SVINSLEN=13;SVINSSEQ=TCACTACTATTCA TR:VR 38:16 18:0 chr1 8872637 r_4_0 C C[chr4:49278648[ . Too_low_VAF SVTYPE=BND;MATEID=r_4_1 TR:VR 426:3 313:0 chr4 49278648 r_4_1 C ]chr1:8872637]C . Too_low_VAF SVTYPE=BND;MATEID=r_4_0 TR:VR 426:3 313:0 chr10 92625614 d_261 G . PASS END=92625752;SVTYPE=DEL;SVLEN=-138 TR:VR 32:20 20:0 chr12 31118783 d_348 A . PASS END=31119076;SVTYPE=DEL;SVLEN=-293;SVINSLEN=5;SVINSSEQ=CCCCC TR:VR 51:14 14:0 chr12 72904140 d_379 C . PASS END=72904427;SVTYPE=DEL;SVLEN=-287 TR:VR 37:20 16:0 chr2 144809273 d_1088 A . PASS END=144809365;SVTYPE=DEL;SVLEN=-92 TR:VR 20:14 19:0 chr2 7719059 d_933 C . Too_small_size END=7719105;SVTYPE=DEL;SVLEN=-46 TR:VR 17:12 23:0 chr3 133478682 r_364 C . PASS END=133547390;SVTYPE=DEL;SVLEN=-68708 TR:VR 36:16 29:0 chr3 2361449 r_355_0 C CC]chr3:60434295] . PASS SVTYPE=BND;MATEID=r_355_1;SVINSLEN=1;SVINSSEQ=C TR:VR 60:14 35:0 chr3 60434295 r_355_1 A AG]chr3:2361449] . PASS SVTYPE=BND;MATEID=r_355_0;SVINSLEN=1;SVINSSEQ=G TR:VR 60:14 35:0 chr4 146457826 d_1483 A . Too_small_size END=146457865;SVTYPE=DEL;SVLEN=-39 TR:VR 25:14 17:0 chr4 20667880 d_1418 A . Too_small_size END=20667918;SVTYPE=DEL;SVLEN=-38 TR:VR 30:5 18:0 chr6 48129880 d_1634 A . PASS END=48130434;SVTYPE=DEL;SVLEN=-554 TR:VR 38:5 21:0 chr7 7683497 r_457 A . PASS END=7688580;SVTYPE=DEL;SVLEN=-5083 TR:VR 50:12 20:0 chr8 133213756 i_1340 A . PASS END=133213799;SVTYPE=INS;SVINSLEN=338;SVINSSEQ=GTAGTTATATATACTATATATACACTATATATAGTAGTTATATATACTATATATACACTATATATAGTAGTTATATATACTATATACACTATATATAGTATATATACTATATATATAAACTATATATAGTAGTTATATATACTACTATATATACTACTATATATAGTATATACTATATATACACTATATAGTAGTTATATATACTACTATATATACTACTATATATAGTATATACTATATATACACTATATATACACTATATATACTATATATATACTATATATACACTATATATACACTATATATACTATATATACATATACTATATAGTAGTTATA TR:VR 78:5 13:0 chr8 68906171 d_1839 T . Too_small_size;Too_low_VAF END=68906154;SVTYPE=INS;SVINSLEN=7;SVINSSEQ=CTATCTA TR:VR 82:4 16:0 chr1 190265861 r_41 A . PASS END=190285461;SVTYPE=DUP;SVLEN=19600 TR:VR 70:4 28:0 chr10 94569210 d_262 T . PASS END=94569302;SVTYPE=DEL;SVLEN=-92 TR:VR 38:12 17:0 chr11 61048248 i_138 T . PASS END=61048300;SVTYPE=INS;SVINSLEN=144;SVINSSEQ=AGTGATGTGCAAAAGTGAAGTGTGCCTGGCACATAGTAGGTGCCCAGTTAAGGTTTGTTGTTACTGTGGTTGGATAAAGCCAGTCTGCCTGGTTGAATCTCACTCTCATGCTTGCTATGCAACATCAAAAGCTCTTTTCTGGGA TR:VR 34:8 14:0 chr12 31118802 d_349 A . PASS END=31120739;SVTYPE=DEL;SVLEN=-1937;SVINSLEN=93;SVINSSEQ=GGCACCCCCCGAGAGGCGGGGATCGAGAGCCTGCCCCTATTCCCCCCTTGGCTCTTAGGACACCCATCTCATGGGTGGGAGGCACTTCCAGCG TR:VR 51:20 16:0 chr12 74182408 r_124 A . PASS END=75559104;SVTYPE=DUP;SVLEN=1376696;SVINSLEN=11;SVINSSEQ=ACACTGAGTTT TR:VR 102:29 38:0 chr13 41594718 r_147 G . PASS END=41667364;SVTYPE=DUP;SVLEN=72646 TR:VR 87:11 31:0 chr14 69210758 d_443 T . PASS END=69211103;SVTYPE=DEL;SVLEN=-345 TR:VR 17:8 19:0 chr16 27036706 d_620 C . PASS END=27037093;SVTYPE=DEL;SVLEN=-387 TR:VR 30:6 13:0 chr18 27895515 r_251 A . PASS END=27901139;SVTYPE=DEL;SVLEN=-5624 TR:VR 55:24 13:0 chr2 147321752 d_1089 G . PASS END=147321811;SVTYPE=DEL;SVLEN=-59;SVINSLEN=3;SVINSSEQ=ATG TR:VR 38:19 17:0 chr2 77870158 d_949 T . PASS END=77870232;SVTYPE=DEL;SVLEN=-74 TR:VR 48:10 13:0 chr3 135581345 d_1348 T . Too_small_size END=135581383;SVTYPE=DEL;SVLEN=-38 TR:VR 37:10 16:0 chr3 2361454 r_356_0 C [chr3:60434311[T . PASS SVTYPE=BND;MATEID=r_356_1 TR:VR 60:16 36:0 chr3 60434311 r_356_1 T [chr3:2361454[T . PASS SVTYPE=BND;MATEID=r_356_0 TR:VR 60:16 36:0 chr4 147298067 r_391 T . PASS END=148252753;SVTYPE=DUP;SVLEN=954686 TR:VR 57:10 42:0 chr4 23803883 r_376 C . PASS END=23902586;SVTYPE=DUP;SVLEN=98703;SVINSLEN=1;SVINSSEQ=T TR:VR 94:12 23:0 chr6 4838387 d_1609 G . PASS END=4838499;SVTYPE=DEL;SVLEN=-112;SVINSLEN=1;SVINSSEQ=C TR:VR 50:3 18:0 chr8 134633698 r_512 C . PASS END=134665313;SVTYPE=DUP;SVLEN=31615 TR:VR 89:9 27:0 chrX 90272417 r_551 T . PASS END=91535970;SVTYPE=DUP;SVLEN=1263553 TR:VR 114:34 29:0 chr1 190528469 d_179 C . Too_small_size END=190528515;SVTYPE=DEL;SVLEN=-46 TR:VR 33:17 17:0 chr13 45368886 r_148_0 C C]chr9:37259192] . PASS SVTYPE=BND;MATEID=r_148_1 TR:VR 51:9 37:0 chr9 37259192 r_148_1 C C]chr13:45368886] . PASS SVTYPE=BND;MATEID=r_148_0 TR:VR 51:9 37:0 chr14 70279869 d_444 G . PASS END=70280545;SVTYPE=DEL;SVLEN=-676;SVINSLEN=13;SVINSSEQ=ACTAAATACTAAA TR:VR 28:16 17:0 chr2 78642142 r_281 A . PASS END=79220091;SVTYPE=DUP;SVLEN=577949 TR:VR 95:16 32:0 chr20 1472827 r_318 G . PASS END=1574787;SVTYPE=DUP;SVLEN=101960 TR:VR 102:33 17:0 chr4 148904652 d_1484 G . PASS END=148904796;SVTYPE=DEL;SVLEN=-144 TR:VR 27:15 14:0 chr5 665754 r_398 C . PASS END=802273;SVTYPE=DEL;SVLEN=-136519 TR:VR 51:14 28:0 chr6 49329222 d_1635 A . PASS END=49329296;SVTYPE=DEL;SVLEN=-74 TR:VR 43:17 18:0 chr7 76870635 d_1750 G . Too_small_size END=76870679;SVTYPE=DEL;SVLEN=-44 TR:VR 36:6 17:0 chr8 134787551 d_1879 C . Too_small_size END=134787596;SVTYPE=DEL;SVLEN=-45 TR:VR 43:22 21:0 chr11 101857872 r_97 A . PASS END=101962971;SVTYPE=DUP;SVLEN=105099 TR:VR 79:12 43:0 chr11 622988 r_69_0 T T]chr7:135942721] . PASS SVTYPE=BND;MATEID=r_69_1 TR:VR 84:9 32:0 chr7 135942721 r_69_1 A A]chr11:622988] . PASS SVTYPE=BND;MATEID=r_69_0 TR:VR 84:9 32:0 chr12 31119256 d_351 C . PASS END=31120832;SVTYPE=DEL;SVLEN=-1576;SVINSLEN=96;SVINSSEQ=CTGAGAGCGGGGACTGAGAAGCCAGCGGCTCTTTCCCCTGGCTCTTAGGACCCCCATTGCAGGGGGGGACGCACCCCCGCCGAGGCGGGGAGTGAG TR:VR 48:15 15:0 chr12 74964854 r_125 A . PASS END=74971657;SVTYPE=DUP;SVLEN=6803 TR:VR 99:35 25:0 chr14 73066830 d_445 T . Too_small_size END=73066865;SVTYPE=DEL;SVLEN=-35 TR:VR 22:9 10:0 chr16 28156485 r_207 T . PASS END=28159448;SVTYPE=DUP;SVLEN=2963 TR:VR 40:5 14:0 chr17 77427841 r_245 A . PASS END=77495316;SVTYPE=DEL;SVLEN=-67475 TR:VR 35:20 34:0 chr18 29595529 d_861 T . PASS END=29597372;SVTYPE=DEL;SVLEN=-1843;SVINSLEN=107;SVINSSEQ=AAATATAATATGTAAAAATATAATATATATCATATAAATATAATATATAAAAATATAATATATATCATATAAATACAATATATAAAAATATAATATATATTATATAT TR:VR 35:14 18:0 chr19 58167773 d_920 C . PASS END=58167923;SVTYPE=DEL;SVLEN=-150 TR:VR 43:14 13:0 chr4 2568432 r_375 A . PASS END=2577680;SVTYPE=DUP;SVLEN=9248 TR:VR 41:6 30:0 chr5 69468654 d_1571 A . PASS END=69468724;SVTYPE=DEL;SVLEN=-70 TR:VR 31:3 13:0 chr7 129938432 d_1760 A . PASS END=129938481;SVTYPE=DEL;SVLEN=-49 TR:VR 55:15 12:0 chr8 134830404 d_1880 C . PASS END=134830909;SVTYPE=DEL;SVLEN=-505 TR:VR 32:9 18:0 chr8 69248260 d_1840 T . Too_small_size END=69248243;SVTYPE=INS;SVINSLEN=5;SVINSSEQ=AGATA TR:VR 60:5 18:0 chr9 137328016 i_1400 T . PASS END=137328016;SVTYPE=INS;SVINSLEN=3052;SVINSSEQ=CCCAAAGTGCTGTGGTGACAATATGTGTGATACAGTGAATGTGCTAATGCCACTGAATTGTACACCCAAAAATGGTTAAAATGGTCAATTTGATCCCATATGTGTTATGTATGTTTTACACACAAAATATTCGTCATAATGTTTTACCACAAAAAAGACACTCAGATGAAAAGAAACAGAAAGTAGTTACTTCGTGGTAATAACAAATATACACCCATATGATGAGTAAAAACAACCAATATATACCTATATGATGAGTAAAAAACTGATATACACTCATATGATGAGTAAAAACAACAAATATACACCCACATGATGAGTAAAAACAACTAATATACTCCCATAGGATGAGTAAAAACAACAAATATACACCCACATGATGAGTAAAAACAATTCAATATACACCCATATGATGAGTAAAAACAACGAATATACTCCCACATGATGAATAAAAACAATGAATAAACACCCACATGATGAGTAAAACAACTAATATACTCCCATATGCTGAGTAAAACAACTAATATACTCCTATATGATGAGTAAAAACAACTAATATACACCCATATGATGAGTAAAACAACTAATATACTCCCATATGATGAGTAAAAACAACGAATAAACACCCACATGATGAGTAAAAACAACTAACATACTCCCATATGATGAGTAAAAACAACTAATATACACCCATATGATGAGTAAAAACAACGAATAAACACCGACATGATGAGTAAAAACAACTAATATACACCAATATGATGAGTAAAACAATTAATATACTCCCATATGATGAGTAAAAACAACAAATATACACCCACATGATGAGTAAAAACAACTAATATACACCTACATGATGCGTAAAAACAACGAACAAACACCCACGTGATGAGTAAAAACAACTAATATACACCCATATCATGAGTAAAAACAACTAATATACTCCCATATGATGAGTAAAAACAACTAATATACAGCCACATGATGAGTAAAAACAACGAATAAACACCCACATGATGAGTAAAAACAATGAATATACACCCACATGAGTAAAAACAACTAATATACTCCCATATGACGAGTAAAAACAACGAATATACACCCACATGATGAGTAAAAAAACAACAAACACCCACATGATGAGTAAAAACAACTAATATACTCCCACATGATGAGTAAAAACAACTAATATACTCCCATATGATGAGTAAAAACAACTAATATACACCCACATGATGAGTAAAACAACTAATATACTCCCATATAATGAGTAAAACAACTAATATACTCCCATATGATGAGTAAAAACAATGAATATACACCCACATGATGAGTAAAAACAACTAATATACTCCCATATGATGAGTAAAAACAACAAGTACACACCCACATGATGAGTAAAACAACTAATATACTCCCATATGATGAGTAAAAACAACAAGTACACACCCACATGATGAGTAAAAACAACTAATATACACCAATATGATGAGTAAAAACAACTAATATACTCCCATATGATGAGTAAAAACAACGAATAAACACCCACATGATGAGTAAAAACAACTAATATACACCCATATGATGAGTAAAAACAACTAATATACTCCCATATGATGAGTAAAAACAACGAATAAACACCCACATGATGAGTAAAAACAACTAATATACACCCATATGATGAGTAAAAACAACTAATATACTCCCATATGATGAGTAAAAACAACTAATATACACCCACATGATGAGTAAAAACAACGAATAAACACCCATATGATGAGTAAAAACAACTAATATACACTCATATGATGAGTAAAACAACTCAATATACACTCATATGATGAGTAAAAACAACTAATATACACTCATATGATGAGTAAAAACAACTAATATACTCCCACATGATGAGTAAAAACAACTAATATACACCCATATGATGAGTAAAAACAACTAATATACACCCACATGATGAGTAAAAACAACGAATAAACACCCATATGATGAGTAAAAAAAACAACTAATATACACCCATATGATGAGTAAAAATAACTAATATACTCCCACATGATGAGTAAAAACAACTAATATACACCCATATGATGAGTAAAAACAACTAATATACACCCACATGATGAGTAAAAACAACGAATAAACACCCATATGATGAGTAAAAACAACTAATATACACTCATATGATGAGTAAAAACAACTAATATACACTCATATGATGAGTAAAAACAACTAATATACACTCATATGATGAGTAAAAACAACTAATATACTCCCACATGATGAGTAAAAACAACTAATATACACCCATATGATGAGTAAAAACAACTAATATACACCCACATGATGAGTAAAAACAACGAATAAACACCCATATGATGAGTAAAACAACTAATATACACCCATATGATGAGTAAAAACAATGAATATACAGACACATGATAGAGTAAAACAACTAATATACACCCATATGATGAGTAAAAACAACTAATAAACACCCACATGATGAGTAAAACAACTAATAAACAACCACATGATGAGTAAAAAAACAACTAATAAACACCCATATGATGAGTAAAAACAACGAATAAACACCCATATGATGAGTAAAACAACTAATATACTCCCATATGATGAGTAAAAACATCGAATAAACACCCATATGATGAGTAAAAACAACGAATATACTCCCATATGATGAGTAAAAACAACTAATATACACCTACATGATGAGTAAAAATAACGAATAAACACCCATATGATGAGTAAAAACAATCAATATACACTCATATGATGAGTAAAAACAACTAATATACACCCACATGATGAGTAAAAACAATTCAATATACACTCATATGATGAGTAAAAACAACTAATATACACCCATATGATGAGTAAAAACAACTAATATACAGTCATATGATGAGTAAAAACAACTAATATACACCTTACATATATAAAACAACTAATATACACCCATATGATGAGTAAAAAAAACAACTAATATACACTCATATGATGAGTAAAAACAACTAATATACAC TR:VR 48:3 16:0 chrX 90572160 d_2062 C . PASS END=90572215;SVTYPE=DEL;SVLEN=-55 TR:VR 28:15 11:0 chrY 56840651 d_2116 C . Too_low_VAF END=56840731;SVTYPE=DEL;SVLEN=-80;SVINSLEN=11;SVINSSEQ=ATATCTCTGCA TR:VR 254:4 125:1 chr1 191417129 d_180 C . PASS END=191417682;SVTYPE=DEL;SVLEN=-553 TR:VR 31:18 14:0 chr1 91668736 d_33 G . PASS END=91668821;SVTYPE=INS;SVINSLEN=85;SVINSSEQ=GAACTGGTCTGGCTGTAACCAAGTGTCTATGTACCGGAACTGGTCTGGCTGTAACCAAGTGTCTATGTACCGGAACTGGTCTGGC TR:VR 33:6 11:0 chr11 102429386 r_98 T . PASS END=102542986;SVTYPE=DUP;SVLEN=113600 TR:VR 67:7 40:0 chr11 62805496 r_84 A . PASS END=62864344;SVTYPE=DUP;SVLEN=58848 TR:VR 56:4 25:0 chr12 75673004 r_126 T . PASS END=75885189;SVTYPE=DUP;SVLEN=212185;SVINSLEN=1;SVINSSEQ=C TR:VR 79:10 38:0 chr15 29194770 d_589 G . PASS END=29197454;SVTYPE=DEL;SVLEN=-2684 TR:VR 45:11 16:0 chr16 30948574 d_621 A . PASS END=30948858;SVTYPE=DEL;SVLEN=-284 TR:VR 48:21 21:0 chr17 78167378 r_246_0 T [chr4:1096298[AGACCGTGGAGCTGTGGGGC . PASS SVTYPE=BND;MATEID=r_246_1;SVINSLEN=19;SVINSSEQ=AGACCGTGGAGCTGTGGGG TR:VR 71:4 25:0 chr4 1096298 r_246_1 C [chr17:78167378[CCCCACAGCTCCACGGTCTC . PASS SVTYPE=BND;MATEID=r_246_0;SVINSLEN=19;SVINSSEQ=CCCCACAGCTCCACGGTCT TR:VR 71:4 25:0 chr18 30548317 d_862 C . PASS END=30548920;SVTYPE=DEL;SVLEN=-603;SVINSLEN=3;SVINSSEQ=ATC TR:VR 43:5 14:0 chr2 82730504 d_950 A . PASS END=82732730;SVTYPE=DEL;SVLEN=-2226 TR:VR 38:13 15:0 chr4 28679184 d_1420 A . Too_small_size END=28679227;SVTYPE=DEL;SVLEN=-43 TR:VR 50:11 19:0 chr7 57487995 i_1174 G . PASS END=57487995;SVTYPE=INS;SVINSLEN=107;SVINSSEQ=AATGGAAAAGAGTGGAAAAGAGTGGAATGGAATGCGAGCGGAATGAAATGGAGTGGAGTGGACTGGAGTAGAGTGAAATGGAATGCAGTGGAATGGAATGAATTGTA TR:VR 57:6 13:0 chr8 135458076 d_1881 G . PASS END=135459104;SVTYPE=DEL;SVLEN=-1028 TR:VR 40:7 21:0 chrX 91521926 r_552_0 G [chrX:91522107[A . PASS SVTYPE=BND;MATEID=r_552_1 TR:VR 60:7 21:0 chrX 91522107 r_552_1 A [chrX:91521926[A . PASS SVTYPE=BND;MATEID=r_552_0 TR:VR 60:7 21:0 chr1 195072198 d_181 G . Too_small_size END=195072236;SVTYPE=DEL;SVLEN=-38 TR:VR 30:13 17:0 chr1 91761409 d_34 A . PASS END=91762084;SVTYPE=DEL;SVLEN=-675 TR:VR 21:11 21:0 chr11 104539525 r_99 C . PASS END=104551488;SVTYPE=DUP;SVLEN=11963 TR:VR 57:4 24:0 chr12 33078122 r_112_0 T T]chr12:33079062] . PASS SVTYPE=BND;MATEID=r_112_1 TR:VR 38:14 21:0 chr12 33079062 r_112_1 A A]chr12:33078122] . PASS SVTYPE=BND;MATEID=r_112_0 TR:VR 38:14 21:0 chr12 76248621 d_380 T . Too_small_size END=76248657;SVTYPE=DEL;SVLEN=-36 TR:VR 35:18 16:0 chr14 75807198 r_162_0 A [chr17:14261852[G . PASS SVTYPE=BND;MATEID=r_162_1 TR:VR 47:7 41:0 chr17 14261852 r_162_1 G [chr14:75807198[G . PASS SVTYPE=BND;MATEID=r_162_0 TR:VR 47:7 41:0 chr16 49128394 d_731 A . Too_small_size END=49128430;SVTYPE=DEL;SVLEN=-36 TR:VR 32:15 24:0 chr17 78197121 r_247_0 C C]chr4:1114566] . Too_low_VAF SVTYPE=BND;MATEID=r_247_1 TR:VR 88:4 28:0 chr4 1114566 r_247_1 T T]chr17:78197121] . Too_low_VAF SVTYPE=BND;MATEID=r_247_0 TR:VR 88:4 28:0 chr18 30931876 d_863 C . PASS END=30933130;SVTYPE=DEL;SVLEN=-1254 TR:VR 38:4 18:0 chr19 24124404 i_490 T . PASS END=24124404;SVTYPE=INS;SVINSLEN=59;SVINSSEQ=AAAAATATTCTAAGGAATAATTCTAAGGAAATAAATAGAATAAAGAATTTTAAGGAAGT TR:VR 34:3 16:0 chr3 47781428 r_360_0 G G]chr7:323602] . PASS SVTYPE=BND;MATEID=r_360_1 TR:VR 77:13 25:0 chr7 323602 r_360_1 G G]chr3:47781428] . PASS SVTYPE=BND;MATEID=r_360_0 TR:VR 77:13 25:0 chr5 20008073 r_401_0 T T]chr8:111847860] . Too_low_VAF SVTYPE=BND;MATEID=r_401_1 TR:VR 140:4 27:0 chr8 111847860 r_401_1 T T]chr5:20008073] . Too_low_VAF SVTYPE=BND;MATEID=r_401_0 TR:VR 140:4 27:0 chr7 13252185 r_459 G . PASS END=13260095;SVTYPE=DUP;SVLEN=7910 TR:VR 61:7 21:0 chr8 13932878 d_1828 A . PASS END=13937078;SVTYPE=DEL;SVLEN=-4200 TR:VR 29:16 19:0 chr8 79374661 d_1842 A . PASS END=79375098;SVTYPE=DEL;SVLEN=-437 TR:VR 93:43 26:0 chr11 107024678 r_100 C . PASS END=107033619;SVTYPE=DUP;SVLEN=8941 TR:VR 61:5 15:0 chr12 33078130 r_113_0 T [chr12:33079060[A . PASS SVTYPE=BND;MATEID=r_113_1 TR:VR 38:14 21:0 chr12 33079060 r_113_1 A [chr12:33078130[A . PASS SVTYPE=BND;MATEID=r_113_0 TR:VR 38:14 21:0 chr14 75814109 r_163_0 G G]chr17:14274657] . PASS SVTYPE=BND;MATEID=r_163_1 TR:VR 57:11 39:0 chr17 14274657 r_163_1 T T]chr14:75814109] . PASS SVTYPE=BND;MATEID=r_163_0 TR:VR 57:11 39:0 chr16 53684069 d_732 T . PASS END=53684232;SVTYPE=DEL;SVLEN=-163;SVINSLEN=6;SVINSSEQ=ATATAT TR:VR 36:11 20:0 chr17 78234554 d_783 C . PASS END=78240981;SVTYPE=DEL;SVLEN=-6427 TR:VR 34:11 25:0 chr17_KI270729v1_random 214630 i_429 A . PASS END=214630;SVTYPE=INS;SVINSLEN=71;SVINSSEQ=TATGGAATGGTACCGAATGGAATGGAATGCAATGGAACGGAATGGAACAGAATGGAATGGAACTGAACGGA TR:VR 30:12 5:0 chr18 36061442 r_252 A . PASS END=80109829;SVTYPE=DEL;SVLEN=-44048387;SVINSLEN=1;SVINSSEQ=A TR:VR 68:15 28:0 chr3 51035654 d_1330 A . PASS END=51035846;SVTYPE=DEL;SVLEN=-192;SVINSLEN=10;SVINSSEQ=CAATAAAAAT TR:VR 30:17 19:0 chr5 109497243 d_1577 A . Too_small_size END=109497278;SVTYPE=DEL;SVLEN=-35 TR:VR 32:19 21:0 chr5 20682698 r_402 C . PASS END=20712028;SVTYPE=DEL;SVLEN=-29330 TR:VR 50:13 35:0 chr5 73736865 r_407 G . PASS END=73766683;SVTYPE=DUP;SVLEN=29818 TR:VR 55:4 30:0 chr7 158917576 i_1289 C . PASS END=158917576;SVTYPE=INS;SVINSLEN=426;SVINSSEQ=CCCCTGCCCTCCACACTCCACCCTCCACCTCTCACTAAACACCTCCTGTCCTCCACACTCCACCCTCCGCCTCTCACTAAACACCTCCTGTCCTCCACACTCCACCCTCCGCCTCTCGCTAAACACCCCCTGCCCTCCACACTCCACCCTCCACCTCTCACTAAACACCTCCTGTCCTCCACACTCCACCCTCCGCCTCTCACTAAACACCTCCTGTCCTCCACACTCCACCCTCTGCCTCTCACTATACACCTCCTGTCCTCCACACTCCACCCTCCGCCTCCGCTAAACACCCCCTGCCCTCCACACTCCCACCCTCCACCTCTCACTAAACACCTCCTGTCCTCCACACTCCACCCTCTGCCTCTCACTAAACACCTCCCTGTCCTCCACACACTCCACCCTCCGCCCCTCCTCGCCAAACAC TR:VR 61:5 10:0 chr8 79441452 d_1843 T . Too_small_size END=79441488;SVTYPE=DEL;SVLEN=-36 TR:VR 100:14 21:0 chr1 199840137 d_183 A . PASS END=199840219;SVTYPE=DEL;SVLEN=-82 TR:VR 38:21 14:0 chr1 248946019 i_82 T . Too_low_VAF END=248946019;SVTYPE=INS;SVINSLEN=281;SVINSSEQ=TGGGGTTGGGGTTAGGGTTAGGGTTAGGGGCCAGGGGCCAGGGGCCAGGGCCAGGCCAGGGCCAGGGCCAGGGCCAGGGCCAGGGCCTTAGGGGCCTAGGGTTAGGGCCCTAGGTTAGGGCAGGGCCGCAGGGCCAGGGCCAGGGCTACTGGGGTCCAGGGCCAGGGCCAGGGCCAGGGCCAGGGCTAGGGCCAGGGCTAGCTCGTAGGCCGGGGTTAGGGCCAGGGCCAGGGCCAGGGCCAGGGCCAGGGCCAGGCCAAGGGCCAGGGCCAGGGCTGAAA TR:VR 207:3 163:1 chr1 9457790 d_13 A . PASS END=9460895;SVTYPE=DEL;SVLEN=-3105 TR:VR 22:9 17:0 chr13 53965793 r_149_0 G ]chr8:128827223]CG . Too_low_VAF SVTYPE=BND;MATEID=r_149_1;SVINSLEN=1;SVINSSEQ=C TR:VR 94:4 47:0 chr8 128827223 r_149_1 G GG[chr13:53965793[ . Too_low_VAF SVTYPE=BND;MATEID=r_149_0;SVINSLEN=1;SVINSSEQ=G TR:VR 94:4 47:0 chr16 53991447 d_733 A . PASS END=53991774;SVTYPE=DEL;SVLEN=-327;SVINSLEN=5;SVINSSEQ=CACGA TR:VR 30:7 16:0 chr18 41224017 d_864 T . PASS END=41224149;SVTYPE=DEL;SVLEN=-132;SVINSLEN=1;SVINSSEQ=A TR:VR 31:18 16:0 chr19 7751562 d_893 A . PASS END=7751687;SVTYPE=DEL;SVLEN=-125 TR:VR 25:16 20:0 chr2 156529235 r_293_0 T T]chr3:165901491] . Too_low_VAF SVTYPE=BND;MATEID=r_293_1 TR:VR 111:3 54:0 chr3 165901491 r_293_1 G G]chr2:156529235] . Too_low_VAF SVTYPE=BND;MATEID=r_293_0 TR:VR 111:3 54:0 chr2 236328243 r_316 A . PASS END=236337140;SVTYPE=DEL;SVLEN=-8897;SVINSLEN=1;SVINSSEQ=C TR:VR 41:12 21:0 chr20 18654023 r_323_0 T T]chr9:42446423] . PASS SVTYPE=BND;MATEID=r_323_1 TR:VR 71:20 33:0 chr9 42446423 r_323_1 G G]chr20:18654023] . PASS SVTYPE=BND;MATEID=r_323_0 TR:VR 71:20 33:0 chr20 8589027 r_319 T . PASS END=9432758;SVTYPE=DUP;SVLEN=843731 TR:VR 101:8 36:0 chr3 143066301 d_1353 C . Too_small_size END=143066336;SVTYPE=DEL;SVLEN=-35 TR:VR 45:38 17:0 chr3 5535316 d_1319 A . PASS END=5535389;SVTYPE=DEL;SVLEN=-73 TR:VR 24:15 18:0 chr4 32099432 d_1423 G . PASS END=32100895;SVTYPE=DEL;SVLEN=-1463 TR:VR 56:18 24:0 chr5 113530245 r_411 G . PASS END=113579274;SVTYPE=DEL;SVLEN=-49029 TR:VR 41:16 37:0 chr5 2191595 d_1529 A . PASS END=2191664;SVTYPE=DEL;SVLEN=-69 TR:VR 31:6 23:0 chr5 75380175 r_408 T . PASS END=75403616;SVTYPE=DUP;SVLEN=23441 TR:VR 58:12 19:0 chr6 519072 i_1077 T . PASS END=519072;SVTYPE=INS;SVINSLEN=1148;SVINSSEQ=CACCCACCGAGCGCCGACCTTTCACCGTCCACACTCGGAGACGAAAACCACCACCCACCGAGCGCCGACACTCACCGTCCACACTCGGAGACGAAAACCACCACCCACCGAGCGCCGACACTCACCGTCCACACTCGGAGACGAGAACCACCACCCACCGAGCGCCGACACTCACCGTCCACACTCGGAGACGACAACCACCACCCACCGAGCGCCGACACTCACCGTCCACACTCGGAGACGAGAACCACCACCCACCGAGCGCCGACACTCACCGTCCACACTCGGAGACGAGAACCACCACCCACCGAGCGCCGACACTCACCGTCCACACTCGGAGACGAGAACCAACACCCACCGAGCGCCTACACTCACCGTCCACACTCGGAGACGAGAACCACCACGCACCGAGCGCCGACACTCACCGTCCACACTCGGAGACGAAACCACCGCTACCACGCACCGAGCGCCGACACTCACCGTCCACACTCGGAGACGAGAACCACCACGCACCGAGCGCCGACACTCACCGTCCACACTCGGAGACGAGAACCACCACCACCGAGCGCCGACACTCACCGTCCACACTCGGAGACGAGAACCACCACCCACCGAGCGCCGACACTCACCGTCCACACTCGGAGACGAGAACCACCACCCACCGAGCGCCGACACACCACCGTCCACACTCGGAGACGAGAACCACCACCCACCGGCGCCGACACTCACCGTCCACACTCGGAGACGAGAACCACCACCCACCGAGCGCCGACACTCACCGTCCACACTCGGGAGACGAGAACCACCACGCACCGAGCGCCTACACTCACCGTCCACACTCGGGAGACGAGAACCACCACGCACCGAGCGCCGACACTCACCGTCCACACTCGGAGACGAGAACACGCACCGAGCGCCGACACTCACCCGTCCCACACTGGAAGCGAGACCCGCCGCTCTCGCGCCCGGCCTTTCCCCGTCCCCCCACCCCCGGACGAGGGCACCCCACCTGGCGGCCGACTTTCACCGTCCCCTCGGTGGGGAACCTGCAGCACCGAGCGCCGACGCCGTCCACACTCGGAGACGAGAACCCACCACCCACCGAGCGCCGACACTCACACCGTCCACACTCGGAGACGAGAACCACC TR:VR 54:4 17:0 chr7 132943908 d_1762 A . Too_low_VAF END=132959970;SVTYPE=DEL;SVLEN=-16062 TR:VR 85:3 24:0 chrX 339767 d_2020 G . PASS END=339924;SVTYPE=DEL;SVLEN=-157;SVINSLEN=52;SVINSSEQ=TGAGAGGGGAGGAGCGGGGGGGGGGTGAGGGGGAGGAGCCGGGGGTGAGAGG TR:VR 26:4 11:0 chrX 97644872 d_2063 C . Too_small_size END=97644910;SVTYPE=DEL;SVLEN=-38 TR:VR 26:16 22:0 chr1 200820859 r_42_0 T [chr1:224248002[A . PASS SVTYPE=BND;MATEID=r_42_1 TR:VR 75:8 37:0 chr1 224248002 r_42_1 A [chr1:200820859[A . PASS SVTYPE=BND;MATEID=r_42_0 TR:VR 75:8 37:0 chr11 110326790 d_323 A . PASS END=110327755;SVTYPE=DEL;SVLEN=-965 TR:VR 35:3 18:0 chr12 34596683 r_114_0 T T]chr8:101975722] . PASS SVTYPE=BND;MATEID=r_114_1 TR:VR 171:14 30:0 chr8 101975722 r_114_1 T T]chr12:34596683] . PASS SVTYPE=BND;MATEID=r_114_0 TR:VR 171:14 30:0 chr13 54697126 d_408 T . PASS END=54697329;SVTYPE=DEL;SVLEN=-203 TR:VR 26:20 14:0 chr16 54576917 d_734 A . PASS END=54576964;SVTYPE=DEL;SVLEN=-47 TR:VR 40:16 12:0 chr17 10944619 d_756 G . PASS END=10950361;SVTYPE=DEL;SVLEN=-5742 TR:VR 25:15 14:0 chr2 158868649 d_1090 G . PASS END=158870150;SVTYPE=DEL;SVLEN=-1501;SVINSLEN=1;SVINSSEQ=C TR:VR 42:9 16:0 chr3 61244994 r_361 C . PASS END=61713591;SVTYPE=DUP;SVLEN=468597 TR:VR 45:8 44:0 chr4 33267844 d_1424 G . PASS END=33267920;SVTYPE=DEL;SVLEN=-76 TR:VR 57:9 18:0 chr5 113925883 d_1578 T . PASS END=113930628;SVTYPE=DEL;SVLEN=-4745 TR:VR 22:3 23:0 chr5 7776603 d_1534 T . Too_small_size END=7776647;SVTYPE=DEL;SVLEN=-44 TR:VR 38:21 20:0 chr7 133583236 r_482 A . PASS END=135089115;SVTYPE=DEL;SVLEN=-1505879 TR:VR 101:16 33:0 chr7 158045686 d_1796 C . PASS END=158046954;SVTYPE=DEL;SVLEN=-1268 TR:VR 73:5 21:0 chrUn_GL000220v1 115333 d_1928 T . Too_low_VAF END=115937;SVTYPE=DEL;SVLEN=-604 TR:VR 356:3 215:0 chrX 3466757 d_2036 A . PASS END=3466987;SVTYPE=DEL;SVLEN=-230 TR:VR 37:9 23:0 chrX 9792145 i_1498 A . PASS END=9792145;SVTYPE=INS;SVINSLEN=968;SVINSSEQ=GAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAACAGAATAGAACAGAATAGAATAGAATTTAGAACAGAATAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAATGGAATAGAACAGAATAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAATAGAACAGAACAGAACAGAACAGAACAGAATAGAACAGAACAGAACAGAACAGAATAGAATAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAATAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAAGCAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAAAATG TR:VR 48:3 10:0 chr1 200840641 r_43_0 T TT]chr1:224278399] . PASS SVTYPE=BND;MATEID=r_43_1;SVINSLEN=1;SVINSSEQ=T TR:VR 80:8 46:0 chr1 224278399 r_43_1 A AA]chr1:200840641] . PASS SVTYPE=BND;MATEID=r_43_0;SVINSLEN=1;SVINSSEQ=A TR:VR 80:8 46:0 chr1 25250486 r_7_0 T [chr8:57511380[T . PASS SVTYPE=BND;MATEID=r_7_1 TR:VR 62:16 34:0 chr8 57511380 r_7_1 T [chr1:25250486[T . PASS SVTYPE=BND;MATEID=r_7_0 TR:VR 62:16 34:0 chr1 99301558 r_22 C . PASS END=99310215;SVTYPE=DUP;SVLEN=8657 TR:VR 33:6 22:0 chr11 114151224 d_324 C . PASS END=114151482;SVTYPE=DEL;SVLEN=-258 TR:VR 24:6 13:0 chr11 70269649 r_86 A . Too_low_VAF END=71834443;SVTYPE=DUP;SVLEN=1564794 TR:VR 74:3 43:0 chr13 58733588 d_409 A . PASS END=58734173;SVTYPE=DEL;SVLEN=-585 TR:VR 22:14 14:0 chr15 37090126 d_592 T . PASS END=37090288;SVTYPE=DEL;SVLEN=-162 TR:VR 30:8 23:0 chr18 45566127 r_253 A . PASS END=45624970;SVTYPE=DEL;SVLEN=-58843 TR:VR 29:14 29:0 chr2 159075949 d_1091 C . PASS END=159076029;SVTYPE=DEL;SVLEN=-80 TR:VR 46:14 22:0 chr20 22050209 r_324 C . PASS END=22053317;SVTYPE=DUP;SVLEN=3108 TR:VR 40:7 16:0 chr20 9475885 r_320 T . Too_low_VAF END=9486724;SVTYPE=DUP;SVLEN=10839 TR:VR 78:3 26:0 chr21 7313579 d_1213 A . Too_low_VAF END=7313652;SVTYPE=INS;SVINSLEN=74;SVINSSEQ=TAAAAACTATAAAGAAGGATTCTGAGAAACTTCTTTGTGATGTATGCATTCATCTCATGGAGTTGAACTATTTT TR:VR 111:4 32:0 chr5 22532773 d_1543 T . PASS END=22532930;SVTYPE=DEL;SVLEN=-157 TR:VR 37:13 22:0 chr5 806064 d_1524 C . PASS END=806173;SVTYPE=DEL;SVLEN=-109 TR:VR 32:15 20:0 chrUn_GL000220v1 118126 d_1929 T . Too_low_VAF END=118207;SVTYPE=DEL;SVLEN=-81 TR:VR 378:3 224:0 chr1 201732540 r_44 G . PASS END=201770628;SVTYPE=DUP;SVLEN=38088 TR:VR 82:5 39:0 chr1 26417059 r_8_0 G ]chr7:27177019]G . PASS SVTYPE=BND;MATEID=r_8_1 TR:VR 93:19 41:0 chr7 27177019 r_8_1 G G[chr1:26417059[ . PASS SVTYPE=BND;MATEID=r_8_0 TR:VR 93:19 41:0 chr11 70360722 d_313 C . PASS END=70360784;SVTYPE=DEL;SVLEN=-62 TR:VR 35:12 16:0 chr12 3541881 r_107 G . PASS END=3584384;SVTYPE=DUP;SVLEN=42503 TR:VR 47:8 27:0 chr12 85192868 i_176 T . Too_small_size END=85192868;SVTYPE=INS;SVINSLEN=33;SVINSSEQ=TATAATTATAATATAAATATATAGTTATATACT TR:VR 42:3 20:0 chr13 67561720 d_410 T . Too_small_size END=67561758;SVTYPE=DEL;SVLEN=-38 TR:VR 22:13 22:0 chr15 37528879 r_178 T . PASS END=37587286;SVTYPE=DUP;SVLEN=58407 TR:VR 72:5 36:0 chr17 121520 d_749 A . PASS END=125487;SVTYPE=DEL;SVLEN=-3967;SVINSLEN=47;SVINSSEQ=AATAGGGAAGCCTAGAATGGTCTCGGTCATAATGAGTCAGAATATAT TR:VR 51:3 29:0 chr18 5000168 d_852 A . PASS END=5000218;SVTYPE=DEL;SVLEN=-50 TR:VR 26:16 17:0 chr2 161712219 r_294 T . PASS END=161723887;SVTYPE=DUP;SVLEN=11668 TR:VR 61:4 24:0 chr20 24765842 d_1138 T . PASS END=24766413;SVTYPE=DEL;SVLEN=-571 TR:VR 26:8 20:0 chr21 10325079 r_339 T . Too_low_VAF END=10360052;SVTYPE=DEL;SVLEN=-34973;SVINSLEN=157;SVINSSEQ=ATTTTTTGACATATATAATATATATTATATATTTTATATATAATACATTGTATGTATAATACATATATTAAATATATATTATATGTCTATGTTATAAATTATATGTAATATATATTATATATTATATATTATATATTTTATATACAATATATATGTT TR:VR 437:6 203:0 chr3 73031215 d_1331 C . Too_small_size END=73031251;SVTYPE=DEL;SVLEN=-36 TR:VR 29:16 12:0 chr4 6782662 d_1411 A . PASS END=6782726;SVTYPE=DEL;SVLEN=-64 TR:VR 38:12 17:0 chr5 116897886 r_412 T . PASS END=116944679;SVTYPE=DUP;SVLEN=46793 TR:VR 57:10 41:0 chr1 26423087 r_9_0 T T[chr7:27165895[ . PASS SVTYPE=BND;MATEID=r_9_1 TR:VR 105:13 37:0 chr7 27165895 r_9_1 C ]chr1:26423087]C . PASS SVTYPE=BND;MATEID=r_9_0 TR:VR 105:13 37:0 chr10 101926529 r_62 A . PASS END=103828772;SVTYPE=DUP;SVLEN=1902243 TR:VR 68:10 34:0 chr11 72155294 r_87 C . PASS END=72449852;SVTYPE=DUP;SVLEN=294558;SVINSLEN=2;SVINSSEQ=TT TR:VR 83:9 47:0 chr12 3583457 d_337 G . Too_small_size END=3583499;SVTYPE=DEL;SVLEN=-42 TR:VR 35:8 12:0 chr12 87227567 i_177 T . PASS END=87227567;SVTYPE=INS;SVINSLEN=872;SVINSSEQ=AAGAATTTCTTTTAATAATAACATTTTGCCAGTAATTGGGTATATTTTGGGAAATAGTAGAATAAAGATTTGTAGACTCTCTTACATCTCCTAAAAGAAAATTCACTAAGCATGTATGTGGAAAACATCTTAAAATAAAGATAGATAAGAACGTTTTTGTGAATTAAAAAAGTAATGTGAACATGTTAAGGTATTTGAACTTACATTTAAATTGGATTATAAGTAACTTAACATTTTTAATGCAAGCATATTAACCTTCTTGTGCTTATGAGATTATTTTGCCAAATTGTAGGACAGAGGAAACTGCTGACTCCACAAAGATCTTCCCTTTGACCAGTTCTCTACTAGGAGCTTAGTTTCCTGATTTTTAGTACAATTTGATATTGAGGAACATATATTTAATAAGGCCGGGTACTTAGGTATAATAATTGGGTAAATTGTACCTTTTATTTTGGCCCTAACTGGTCACACTTCTGGGAATATTCTTCCCCTATCAGGAATTTCCATGTTACCAATATAATTTTGGGATTCAGTCACCTTTATTAGACATGTGGCCCCATGTGAAGTTTCTTTATACCCAATTACTGGCAAAAAATGTTATTATTAAACTGATGAGAAAATATAAAGGTTTATTACTGGATTAAATAAGTTTTTCCATATGCTTGAATTTTTTATACACACAGTATATACTCTATTATATGTATACACAGAATACAACTCTATCAGTATTGAACTTAGTTTGTCATTCCATAAAATGGCCATAGATGGCCAGATCAAGTAATCCTACTCATTTTACCCTGTATTACTGAAAATAAAAATGGGGGGGGGCAAATAAAGACTTTAATATCTTTAAAAAAAAAAAAAAAAAAAAA TR:VR 46:11 18:0 chr13 70058581 d_411 T . PASS END=70058654;SVTYPE=DEL;SVLEN=-73 TR:VR 32:22 14:0 chr15 40861829 r_179 C . PASS END=40936953;SVTYPE=DUP;SVLEN=75124;SVINSLEN=1;SVINSSEQ=A TR:VR 76:13 22:0 chr16 64165952 d_735 A . PASS END=64166749;SVTYPE=DEL;SVLEN=-797 TR:VR 31:9 13:0 chr19 8911476 d_896 A . PASS END=8913337;SVTYPE=DEL;SVLEN=-1861;SVINSLEN=8;SVINSSEQ=TTAATTTT TR:VR 33:3 19:0 chr2 164969596 d_1092 C . PASS END=164970821;SVTYPE=DEL;SVLEN=-1225 TR:VR 46:8 15:0 chr21 10360053 r_340_0 G ]chr22:21327356]GTTT . Too_low_VAF SVTYPE=BND;MATEID=r_340_1;SVINSLEN=3;SVINSSEQ=GTT TR:VR 349:3 174:1 chr22 21327356 r_340_1 T TAAC[chr21:10360053[ . Too_low_VAF SVTYPE=BND;MATEID=r_340_0;SVINSLEN=3;SVINSSEQ=AAC TR:VR 349:3 174:1 chr22 49935617 i_862 C . PASS END=49935617;SVTYPE=INS;SVINSLEN=565;SVINSSEQ=AGGGTGGGGGCGGAGGGGAGGATGGGGGTCCGGGAGGAGCAGGGGCGGGGACGGAGGGGAGGGTGGGGTCCGGGAGGAGCAGGAGTGGAGGCGGAGGGGAGGGGGTGGGGATGTGGGAGGAGCAGGGGTGGGGCAAAGGGGAGTGGGTGGGGGGTTCAGGATGAGCAGGGGTTGGGGCGGAGGGGAGGGTGTGGGGGGTCCAGGAGGAGCAGGGGTAGGGGCGGAGGGGAGCCTGGGGGTCTGGGGAGAAGGAGGGGTGCGGGGTGTGGGGCCTGGGGTGAGCAAGGGTGGGGGCGGAGGGGAGGATGGGGGTCCGGGAGGAGCAGGGGCGGGGACGGAGGGGAGGGTGGGGGTCCGGGAGGAGCAGGAGTGGAGGCGGAGGGGAGGGTGGGGATGTGGGAGGAGCAGGGGTGGGGGCAAAGAGGGAGGGGGGGTTCCGGGATGAGCAGGGGTTGGGGCGGAGGGGAGGGTGTGGGGGGTCCAGGAGGAGCAGGGGTAGGGGCGGAGGGGAGCCTGGGGGTCTGGGAGAAGGAGGGGTGCGGGGTGTGGGGCCTGGGGTGAGCAA TR:VR 40:6 8:0 chr3 75192313 i_894 A . Too_small_size END=75192313;SVTYPE=INS;SVINSLEN=37;SVINSSEQ=GCACTTGTAGCTTCTTTGGTGCCCCCCAACTATGATG TR:VR 26:12 15:0 chr5 117382802 r_413 C . PASS END=128019554;SVTYPE=DUP;SVLEN=10636752 TR:VR 63:14 38:0 chrX 109041255 r_553 C . PASS END=110033591;SVTYPE=DUP;SVLEN=992336 TR:VR 75:15 31:0 chrX 37657413 d_2048 A . Too_small_size END=37657454;SVTYPE=DEL;SVLEN=-41 TR:VR 36:14 16:0 chr10 102952591 d_263 A . PASS END=102952646;SVTYPE=DEL;SVLEN=-55 TR:VR 35:16 20:0 chr11 76408244 r_88_0 A A[chr18:12555087[ . Too_low_VAF SVTYPE=BND;MATEID=r_88_1 TR:VR 68:3 33:0 chr18 12555087 r_88_1 T ]chr11:76408244]T . Too_low_VAF SVTYPE=BND;MATEID=r_88_0 TR:VR 68:3 33:0 chr12 88313619 i_178 T . PASS END=88313619;SVTYPE=INS;SVINSLEN=1074;SVINSSEQ=AAAGAAAGGAAATTATGATCTTCCCTTTGACCAGTTCTCTACTAGGAGCTTAGTTTCCTGATTTTTAGTACAATTTGATATTGAGGAACATATATTTAATAAGGCCGGGTACTTAGGTATAATAATTGGGTAAATTGTACCTTTTATTTTGGCCCTAACTGGTCACACTTCTGGGAATATTCTTCCCCTATCAGGAATTTCCATGTTACCAATATAATTTTGGGATTCAGTCACCTTTATTAGACATGTGGCCCCATGTGAAGTTTCTTTTTCTTTCTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCTACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTATTAAACTGATGAGAAAATATAAAGGTTTATTACTGGATTAAATAAGTTTTTCCATATGCTTGAATTTTTTATACACACAGTATATACTCTATTATATGTATACACAGAATACAACTCTATCAGTATTGAACTTAGTTTGTCATTCCATAAAATGGCCATAGATGGCCAGATCAAGTAATCCTACTCATTTTACCCTGTATTACTGAAAATAAAAATGGGGGGGGGCAAATAAAGACTTTAATATCTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA TR:VR 46:20 20:0 chr15 42936850 r_180 G . PASS END=42993232;SVTYPE=DUP;SVLEN=56382 TR:VR 67:9 30:0 chr16 64192299 d_736 C . PASS END=64192527;SVTYPE=DEL;SVLEN=-228 TR:VR 23:7 16:0 chr2 165986390 r_295 C . PASS END=166051740;SVTYPE=DUP;SVLEN=65350 TR:VR 73:9 36:0 chr2 237654681 r_317 G . PASS END=237691201;SVTYPE=DEL;SVLEN=-36520 TR:VR 49:6 27:0 chr3 75192335 i_895 C . Too_small_size END=75192335;SVTYPE=INS;SVINSLEN=36;SVINSSEQ=CCCCCAACTATGATGCACTTGTAGCTTCTTTGGTGC TR:VR 26:13 15:0 chr4 16019117 d_1415 A . PASS END=16020258;SVTYPE=DEL;SVLEN=-1141 TR:VR 38:11 14:0 chr5 27234316 r_403 T . PASS END=27251625;SVTYPE=DEL;SVLEN=-17309 TR:VR 61:8 30:0 chr6 56358922 d_1636 T . PASS END=56359747;SVTYPE=DEL;SVLEN=-825 TR:VR 42:3 22:0 chr7 139040560 d_1765 G . PASS END=139042931;SVTYPE=DEL;SVLEN=-2371 TR:VR 53:8 17:0 chr8 8091763 r_493_0 A ACACAAAATTCC]chr8:12570301] . Too_low_VAF SVTYPE=BND;MATEID=r_493_1;SVINSLEN=11;SVINSSEQ=CACAAAATTCC TR:VR 83:4 78:1 chr8 12570301 r_493_1 G GGGAATTTTGTG]chr8:8091763] . Too_low_VAF SVTYPE=BND;MATEID=r_493_0;SVINSLEN=11;SVINSSEQ=GGAATTTTGTG TR:VR 83:4 78:1 chrX 11052942 d_2042 A . Too_small_size END=11052977;SVTYPE=DEL;SVLEN=-35 TR:VR 40:11 20:0 chrX 39519723 d_2049 C . PASS END=39519778;SVTYPE=DEL;SVLEN=-55 TR:VR 32:10 19:0 chrY 56845219 d_2120 C . Too_low_VAF END=56846196;SVTYPE=DEL;SVLEN=-977;SVINSLEN=21;SVINSSEQ=ATAACTCTGCCCAGATCATCC TR:VR 200:3 105:0 chr11 121852599 d_325 G . PASS END=121852657;SVTYPE=DEL;SVLEN=-58 TR:VR 40:3 21:0 chr11 77312954 d_314 T . PASS END=77316212;SVTYPE=DEL;SVLEN=-3258;SVINSLEN=6;SVINSSEQ=CCAAAT TR:VR 33:4 14:0 chr12 92860915 r_127 A . PASS END=92865978;SVTYPE=DUP;SVLEN=5063 TR:VR 55:8 23:0 chr13 76234365 d_412 G . PASS END=76234599;SVTYPE=DEL;SVLEN=-234 TR:VR 35:15 11:0 chr15 48084709 d_593 G . PASS END=48084758;SVTYPE=DEL;SVLEN=-49 TR:VR 24:7 19:0 chr16 64628446 d_737 C . Too_small_size END=64628492;SVTYPE=DEL;SVLEN=-46 TR:VR 33:9 21:0 chr18 58263446 r_254 A . PASS END=58321759;SVTYPE=DUP;SVLEN=58313 TR:VR 60:3 33:0 chr2 166765741 r_296 T . PASS END=166775064;SVTYPE=DEL;SVLEN=-9323 TR:VR 39:13 26:0 chr6 18367442 r_430 C . PASS END=18523242;SVTYPE=DUP;SVLEN=155800 TR:VR 171:27 27:0 chr7 140132069 d_1766 G . PASS END=140132142;SVTYPE=DEL;SVLEN=-73;SVINSLEN=1;SVINSSEQ=A TR:VR 44:28 18:0 chr7 90713586 r_474 C . PASS END=90833350;SVTYPE=DUP;SVLEN=119764 TR:VR 114:23 50:0 chr8 81550711 d_1844 G . Too_small_size END=81550750;SVTYPE=DEL;SVLEN=-39 TR:VR 79:21 21:0 chrX 4095993 d_2037 T . Too_small_size END=4096029;SVTYPE=DEL;SVLEN=-36 TR:VR 47:24 17:0 chr1 20643868 r_6_0 G G]chr8:65893438] . PASS SVTYPE=BND;MATEID=r_6_1 TR:VR 64:4 27:0 chr8 65893438 r_6_1 T T]chr1:20643868] . PASS SVTYPE=BND;MATEID=r_6_0 TR:VR 64:4 27:0 chr10 103070006 d_264 G . Too_small_size END=103070044;SVTYPE=DEL;SVLEN=-38 TR:VR 33:10 20:0 chr11 122445358 r_102_0 T [chr2:211217471[TATATATATATACACACACACACACACACACAAAT . Too_low_VAF SVTYPE=BND;MATEID=r_102_1;SVINSLEN=34;SVINSSEQ=TATATATATATACACACACACACACACACACAAA TR:VR 78:3 36:0 chr2 211217471 r_102_1 T [chr11:122445358[TTTGTGTGTGTGTGTGTGTGTGTATATATATATAT . Too_low_VAF SVTYPE=BND;MATEID=r_102_0;SVINSLEN=34;SVINSSEQ=TTTGTGTGTGTGTGTGTGTGTGTATATATATATA TR:VR 78:3 36:0 chr11 80266125 d_315 T . PASS END=80266184;SVTYPE=DEL;SVLEN=-59 TR:VR 33:15 17:0 chr12 93826026 r_128_0 G G[chr5:140551658[ . PASS SVTYPE=BND;MATEID=r_128_1 TR:VR 69:11 27:0 chr5 140551658 r_128_1 A ]chr12:93826026]A . PASS SVTYPE=BND;MATEID=r_128_0 TR:VR 69:11 27:0 chr13 76886359 r_150 G . PASS END=77041344;SVTYPE=DUP;SVLEN=154985;SVINSLEN=1;SVINSSEQ=C TR:VR 86:11 40:0 chr14 86253500 i_229 T . PASS END=86253509;SVTYPE=INS;SVINSLEN=2274;SVINSSEQ=TTAGACATTTCCATAATCTGAAATAGGTTCCTTATAAATTTGTCTAGTCAGTCACCCATCCTCCTTATAGGCAATACATTAGTTATATGTATATTAGAAATTCACACAAATAAAACTGTGCAGCACATACCATTTTGGTTTGGCTTCTTTTGTAAATATTAGGTTTGTGAGAGTCATCCATGTTGTAGAGAAAGAAGTAATACATTCTTTTTTATTGTTGAGTTATAGTAACCATATTAAAATTGCCTACCCATTTTCCTGTTTATAGATATTTGGATTATTTTAAGATTAGGCTATTATGAACAAAAGTGCTATGAGTATTCTTGTATAAGTCTTTTGTGAACATGTATTTTCATTTCTCCTAGGTAAATACCTAATAGTAGAATGCCGGAGTCATAAGAAAGATACATGTTTTGATTTTTTTCTTGTAAAATGTTGCCACAATTTTGTAACAGATTTATTGTATTATAGTCAAATTCCACCAGTAATGTAGAAGATTTTCATGTTTTCCATACCCTCATCAAAACTTGGTAATAATCACTTTAATGTATCCATTCTAGCTCATATAGGTATCTCATTGTTGTTTTAACTGCACTTTCCTGATGATTACAAATATTTAAAATCTTTTATACTGCTTAAAGTTTATCTTATTTTGTGTATAATAATATTTAAAGCATATGTTTTCAAATTTTTGCCCATTTTTTAATTGGTCTGTTTGTCTTTCCATTGAGTTTTAGGTGTTTTTTATATATTTTGGATATAAGTTCTCTGTAAGAATATGCACTGAAAATAGTTTCCAATATATAGCTCATCTTTTATACTTCTTAAGGATGTCCTTTAATGAACAAAAAAATTCTCAATTTTACTGAAGTCTAATCTGTCAATTCTTACGTTTTGTTTTTGAGTCATAAGAAATTTCTGTCTAACCAAAGACTATATTTATCTGTAATAAATATATTTATATTTTTACTGTAGGTAATGATATACACACTATATTTACCTATAGTATATAGCATTTACTATGCCATATTTACCCATGGTATATAGTATTTACTATACTATATTTACCTATAGTAAATACATTTGCAGCCTTTGCTGGAAATTTCTAGAAGTTATATAGCATTACATTTTACACTTAAGTTTATGTTCTATTTCAAATTGACTTTTGTGTACTGTGTAGGTACAATAGAGGTTACTTTTTTTATTCTCAAAAGAATTATCCAGAATTAATAATCCAGAATGATTTATTGAAAAGAACTTCTTTACCCTATTTCATGTTTTTGATACCTTCCTAAAAGATAAATTTATCATGTAAGTGTGGGTCTATTTCTGGACTCTACATTCTGCTACATTAGTATAAAACCAATACCACACTGTTTCAATTACTATAATTTAACATAAATTCAATTCATATCCTGGTACTCTTTTTAGTGATTATTTTTGCTATTCTAGGTTCTTTATATTTCTAATAAATTTACAATCTAATTGTGAATTTGTATTAAAAATAGCTTGCAATGATTTTAAATGAAGTTGTGATGAATCTATAGATCAAATTTGGAAAAAGTCCACTTAACAAAATCGAGTCTTTCAATTTGTATTTAGTTCTCATTTCATTTACTCCAGACCATTTTCATAAAATTTTAATTTTATGGTCTTATATTCTTTTAATTAAATTGCCCCTAGTATTTTATGGTGTTGATACTATTATGAATGGTATTTTTAAAAATTTTCCAATTACACATTACTAGTGCCTAAGAAGACAATTTTTACATACAACTCACCCTTGAACAACACAGGTTTGAACTGCACAGGTGCACTTATATGTGGATTTATTTTTAGTAACTATACTGAAAACCTTTTTGGAGATTTGTGACAATTTGAAAAAACCATCAGAAACACTAAATAGCCTAGAAATACGAAAAAAAGAAAGAGAGATGTCATGAATGCATAATATATATATAGATATTAGTCTTTTAAAATCATTTACTACCATCAAATATACACAAATATATTATAAAAAGTAAAAATGTATCAAAAAGCACCAAAACATAGACTATACATGGCATGGTGCCGTCTATGTGGAGAGAAATTTAAACAGAGGTAAGGATGAGTATTAAGTCATAATTGCATAAAATTAACTGTAGTACACACTGTACTATTGTAATAATTTGGTAGCCACCTCTTGTTGCCATTTCAATGAGCTCAAGTGTTGGAAGTATCTCTTGTATGAGGCTACTCATCTCTGTGTGGACAGTTTTCCTTCCAGTAAATTGT TR:VR 50:6 28:0 chr15 48722187 r_181 A . PASS END=48732259;SVTYPE=DUP;SVLEN=10072 TR:VR 37:7 21:0 chr16 6648849 d_616 A . PASS END=6650600;SVTYPE=DEL;SVLEN=-1751 TR:VR 17:8 14:0 chr3 150203219 r_365 T . PASS END=150600927;SVTYPE=DUP;SVLEN=397708 TR:VR 126:33 34:0 chr4 168669671 r_392 A . PASS END=168682237;SVTYPE=DUP;SVLEN=12566 TR:VR 43:12 29:0 chr4 38367211 r_377_0 A ]chr6:83157817]T . PASS SVTYPE=BND;MATEID=r_377_1 TR:VR 80:14 29:0 chr6 83157817 r_377_1 T T[chr4:38367211[ . PASS SVTYPE=BND;MATEID=r_377_0 TR:VR 80:14 29:0 chr5 27395258 d_1545 G . PASS END=27395317;SVTYPE=DEL;SVLEN=-59 TR:VR 32:10 14:0 chr5 88431232 d_1572 A . PASS END=88432850;SVTYPE=DEL;SVLEN=-1618 TR:VR 30:17 24:0 chr7 140987089 d_1767 G . PASS END=140987747;SVTYPE=DEL;SVLEN=-658 TR:VR 38:11 16:0 chr7 57898395 d_1726 T . PASS END=57898502;SVTYPE=INS;SVINSLEN=107;SVINSSEQ=CATGTTTGAGCAGTATGGAAACGATCTTTTTGTAGAATCTGCAAGTGGCCATTAGGAGTGCTTTGCAGCCTATGGTATATAAGGAAATATCTTCACATAAAATCTAG TR:VR 60:10 25:0 chr7 92714445 d_1751 G . PASS END=92715258;SVTYPE=DEL;SVLEN=-813 TR:VR 60:31 20:0 chr8 81578333 r_501 A . PASS END=81585014;SVTYPE=DEL;SVLEN=-6681 TR:VR 98:23 23:0 chr1 206501553 d_184 G . PASS END=206501601;SVTYPE=DEL;SVLEN=-48 TR:VR 31:15 25:0 chr10 104104788 d_265 C . PASS END=104104966;SVTYPE=DEL;SVLEN=-178 TR:VR 38:22 16:0 chr11 122445999 d_326 T . PASS END=122446324;SVTYPE=DEL;SVLEN=-325 TR:VR 32:3 17:0 chr11 80380405 r_89_0 A [chr11:85938734[AT . PASS SVTYPE=BND;MATEID=r_89_1;SVINSLEN=1;SVINSSEQ=A TR:VR 66:8 36:0 chr11 85938734 r_89_1 T [chr11:80380405[TT . PASS SVTYPE=BND;MATEID=r_89_0;SVINSLEN=1;SVINSSEQ=T TR:VR 66:8 36:0 chr12 93826033 r_129_0 C ]chr5:140551659]T . PASS SVTYPE=BND;MATEID=r_129_1 TR:VR 69:15 27:0 chr5 140551659 r_129_1 T T[chr12:93826033[ . PASS SVTYPE=BND;MATEID=r_129_0 TR:VR 69:15 27:0 chr13 77331640 r_151_0 G [chr9:134574518[CTAACACACAGTAGGTGCTCACAGATGCCCCCTCTGACACCCAGGCAAGGACTAACACACAGTAGGTGCTCACAGACGCCCCTCTGACACCCAGGCAAGGACTCACACACAGTAGGTGCTCACAGGCGCCCCTCTGACTCCCAGGCAAGGACTCACACACT . PASS SVTYPE=BND;MATEID=r_151_1;SVINSLEN=160;SVINSSEQ=CTAACACACAGTAGGTGCTCACAGATGCCCCCTCTGACACCCAGGCAAGGACTAACACACAGTAGGTGCTCACAGACGCCCCTCTGACACCCAGGCAAGGACTCACACACAGTAGGTGCTCACAGGCGCCCCTCTGACTCCCAGGCAAGGACTCACACAC TR:VR 54:3 33:0 chr9 134574518 r_151_1 T [chr13:77331640[GTGTGTGAGTCCTTGCCTGGGAGTCAGAGGGGCGCCTGTGAGCACCTACTGTGTGTGAGTCCTTGCCTGGGTGTCAGAGGGGCGTCTGTGAGCACCTACTGTGTGTTAGTCCTTGCCTGGGTGTCAGAGGGGGCATCTGTGAGCACCTACTGTGTGTTAGT . PASS SVTYPE=BND;MATEID=r_151_0;SVINSLEN=160;SVINSSEQ=GTGTGTGAGTCCTTGCCTGGGAGTCAGAGGGGCGCCTGTGAGCACCTACTGTGTGTGAGTCCTTGCCTGGGTGTCAGAGGGGCGTCTGTGAGCACCTACTGTGTGTTAGTCCTTGCCTGGGTGTCAGAGGGGGCATCTGTGAGCACCTACTGTGTGTTAG TR:VR 54:3 33:0 chr14 86355425 r_165 A . PASS END=86359047;SVTYPE=DUP;SVLEN=3622 TR:VR 44:6 23:0 chr15 49050761 r_182_0 A ]chr5:52531092]CC . PASS SVTYPE=BND;MATEID=r_182_1;SVINSLEN=1;SVINSSEQ=C TR:VR 54:3 37:1 chr5 52531092 r_182_1 C CG[chr15:49050761[ . PASS SVTYPE=BND;MATEID=r_182_0;SVINSLEN=1;SVINSSEQ=G TR:VR 54:3 37:1 chr16 6727369 d_617 T . PASS END=6728191;SVTYPE=DEL;SVLEN=-822 TR:VR 20:6 17:0 chr18 62848504 d_869 T . Too_small_size END=62848540;SVTYPE=DEL;SVLEN=-36 TR:VR 41:12 8:0 chr2 169042361 r_297 A . PASS END=169136253;SVTYPE=DUP;SVLEN=93892;SVINSLEN=18;SVINSSEQ=CACTTGGATGTGTAGATG TR:VR 92:17 40:0 chr22 10721444 d_1263 T . Too_low_VAF END=10721548;SVTYPE=DEL;SVLEN=-104;SVINSLEN=79;SVINSSEQ=TCTATTCCATTCGAGTCCATTCTATTCCTTTCCACTTGAGTCCATTCCGTTGCATTCCATTCGAGTCCATTCCATTCCA TR:VR 190:7 88:1 chr3 81428147 d_1333 T . PASS END=81428815;SVTYPE=DEL;SVLEN=-668 TR:VR 30:21 22:0 chr4 169152346 i_988 T . PASS END=169152346;SVTYPE=INS;SVINSLEN=115;SVINSSEQ=TCTTTCCCCTACTCACTTCTCCCAACCAGACTCTCCTCCATTCAAGCCTTGAAAAATTTTGTGTTCTACTTTAATAAGCAAAGTGTTTTGCATTATTAAAAGGAGATGTGGCTGT TR:VR 22:12 18:0 chr5 27899723 d_1546 A . PASS END=27899777;SVTYPE=DEL;SVLEN=-54 TR:VR 23:8 16:0 chr5 88535289 r_409 T . PASS END=88545870;SVTYPE=DEL;SVLEN=-10581 TR:VR 28:13 16:0 chr7 9410332 r_458 A . PASS END=9419708;SVTYPE=DUP;SVLEN=9376 TR:VR 75:12 31:0 chr8 141911099 i_1345 A . PASS END=141911109;SVTYPE=INS;SVINSLEN=673;SVINSSEQ=ACTAGAAAATTAAAAGTTACTGATGAATTGGTCAGGGATATTTAAAAATTATAGATATGTAATAATAAGGATAAACAGAATATAATATGACTGTGTAGAGCATTAATTCTCAATGCACATGGAGAAAGAAATAATGGACACAATTTTAACTTTCTAGAAAAAAATATTCTATTAATTAACACTGTACTTCTAAAAAAATAAGGTTTATGCCTTTTTCCCATTGTTCTGTAAAGATTTTTCTAAATATTAGAGTAAATTATTTAAAAATACTGAAGAAAGATAAAGAAGATAAAAATTACCCAAAATCTTATCACCCAGGAAGAATTATTATTAATATAATAACATTGTCTTTAACATTTTGATATATTTCCTTCTAGACTTTTTTTTTGGTAGGGGGAGGCTTACGTCTCATACTATCAATTATGCAAAAGCTTGAATATTACAAAACAATCTAACAGTTGAATTTTAGACGAATAACAAGCTCTAAGGTCCAGATAGGAAAGAAGATGAAAACAGGGATAACCATTTGATGTTAAAAAGTCAGTTAAAGAAGTTGCCTGAGAAGCTGGTAGAGTCTGCTAATTCAGTGATAAGAAAACACTTGCCAATTTTTTCCTGTAAGTTTCACTTAGCCCATGTTACCCCTTTTGAGTGTGACTCAACCATCAGTGGA TR:VR 40:10 14:0 chr9 14423866 r_516 A . PASS END=14433053;SVTYPE=DEL;SVLEN=-9187 TR:VR 32:15 20:0 chr1 206924777 i_56 G . PASS END=206924777;SVTYPE=INS;SVINSLEN=257;SVINSSEQ=TGGTGTGTGGCTATGAGTGTGTGTGTGTGCTCTGTGGAGTGTGTGTGTGGTGTGTGGCTATGTGTGTGTGTGCTCTGTCTAGTGTGTGTGTGGTGTGTGGTTATGTGTGTGTGATTGTGTGTGTGATGTGTCTGTGAGTGTGTGTGTGTGTGCTCCATGAGTGTGTGTGTGTGTGTGAGTGTGTGAGTGTGTGTGTGTGTGTGTGTGTGTGGGTATGAGTGTGTGTGTGAGTTATGTGTGGTGTGTGGCTAGGTGGT TR:VR 43:3 13:0 chr11 122760132 d_327 T . PASS END=122760209;SVTYPE=DEL;SVLEN=-77 TR:VR 30:5 19:0 chr11 80380403 r_90_0 T T]chr11:85938731] . PASS SVTYPE=BND;MATEID=r_90_1 TR:VR 66:22 36:0 chr11 85938731 r_90_1 C C]chr11:80380403] . PASS SVTYPE=BND;MATEID=r_90_0 TR:VR 66:22 36:0 chr12 37705440 d_357 G . PASS END=37705503;SVTYPE=INS;SVINSLEN=139;SVINSSEQ=TTTTTATGTGAAGATATTTCTTATTTCACCCGAGGCCACAAAGGACTCACAAGTATCCCTTTGCAGATTCTACCAAATGTCTGTTTCTAAACTGCTCAATCAAAAGACTTATTCATCTCTATGAGATGAATGCACACAT TR:VR 47:17 22:0 chr12 95611287 r_130 C . PASS END=95646069;SVTYPE=DUP;SVLEN=34782 TR:VR 99:5 20:0 chr13 78497997 d_413 G . PASS END=78498047;SVTYPE=DEL;SVLEN=-50;SVINSLEN=3;SVINSSEQ=AAG TR:VR 46:17 18:0 chr14 87247262 d_448 T . PASS END=87247348;SVTYPE=DEL;SVLEN=-86 TR:VR 48:20 13:0 chr15 51126749 r_183_0 A A]chr15:51128161] . PASS SVTYPE=BND;MATEID=r_183_1 TR:VR 34:12 20:0 chr15 51128161 r_183_1 T T]chr15:51126749] . PASS SVTYPE=BND;MATEID=r_183_0 TR:VR 34:12 20:0 chr16 67563408 r_216_0 G [chr8:42426788[T . PASS SVTYPE=BND;MATEID=r_216_1 TR:VR 75:16 31:0 chr8 42426788 r_216_1 T [chr16:67563408[T . PASS SVTYPE=BND;MATEID=r_216_0 TR:VR 75:16 31:0 chr18 63349908 r_255 T . PASS END=63381126;SVTYPE=DUP;SVLEN=31218;SVINSLEN=18;SVINSSEQ=AAACCTAACATATATATG TR:VR 61:7 26:0 chr2 240978660 d_1130 T . PASS END=240978773;SVTYPE=INS;SVINSLEN=248;SVINSSEQ=CCCTGCTCAGTCTCTGGGGTAGGAGCCTCAGGAGCCCAGGCTCATCCCTGCTCAGGCTCTGGGGTAGGAGCCTCAGGAGCCCAGGCTCATCCCTGCTCAGTCTCTGGGGTAGGAGCCTCTGGAGCCCAGGCTCACCCCTGCTCAGGCTCTGGGGTAGGAGCCTCAGGATCCCAGGCTCATCCCTGCTCAGTCTCTGGGGTAGGAGCCTCAGGATCCCAGGCTCATCCCTGCTCAGTCTCTGGGGTAGG TR:VR 16:3 13:0 chr20 34897849 r_329 G . PASS END=35081433;SVTYPE=DUP;SVLEN=183584 TR:VR 80:22 32:0 chr5 28615348 d_1547 T . PASS END=28615500;SVTYPE=DEL;SVLEN=-152 TR:VR 31:3 10:0 chr6 19626289 d_1617 C . Too_small_size END=19626327;SVTYPE=DEL;SVLEN=-38 TR:VR 81:24 18:0 chr8 142003060 d_1883 T . PASS END=142004886;SVTYPE=DEL;SVLEN=-1826 TR:VR 43:9 17:0 chrX 43969225 r_540 C . PASS END=43992564;SVTYPE=DEL;SVLEN=-23339;SVINSLEN=4;SVINSSEQ=TTTT TR:VR 50:18 24:0 chr1 207191066 d_185 T . Too_small_size END=207191103;SVTYPE=DEL;SVLEN=-37 TR:VR 34:4 25:0 chr10 106058448 d_266 T . PASS END=106058669;SVTYPE=DEL;SVLEN=-221;SVINSLEN=11;SVINSSEQ=ACAATATATCC TR:VR 38:8 13:0 chr11 123902499 r_103 T . PASS END=123910647;SVTYPE=DUP;SVLEN=8148 TR:VR 53:3 27:0 chr11 81994930 r_91_0 A [chr4:62476817[T . PASS SVTYPE=BND;MATEID=r_91_1 TR:VR 94:19 34:0 chr4 62476817 r_91_1 T [chr11:81994930[T . PASS SVTYPE=BND;MATEID=r_91_0 TR:VR 94:19 34:0 chr15 51126773 r_184_0 A [chr15:51128163[T . PASS SVTYPE=BND;MATEID=r_184_1 TR:VR 34:12 20:0 chr15 51128163 r_184_1 T [chr15:51126773[T . PASS SVTYPE=BND;MATEID=r_184_0 TR:VR 34:12 20:0 chr16 67721875 r_217 T . PASS END=67750384;SVTYPE=DUP;SVLEN=28509;SVINSLEN=4;SVINSSEQ=CAGC TR:VR 77:4 18:0 chr17 17446228 r_229_0 T T[chr3:7609774[ . PASS SVTYPE=BND;MATEID=r_229_1 TR:VR 53:17 36:0 chr3 7609774 r_229_1 C ]chr17:17446228]C . PASS SVTYPE=BND;MATEID=r_229_0 TR:VR 53:17 36:0 chr2 175564102 d_1094 A . Too_small_size END=175564140;SVTYPE=DEL;SVLEN=-38;SVINSLEN=1;SVINSSEQ=G TR:VR 26:5 20:0 chr20 35173574 r_330 C . Too_low_VAF END=35194619;SVTYPE=DUP;SVLEN=21045 TR:VR 61:3 27:0 chr4 170631161 d_1485 C . PASS END=170631276;SVTYPE=DEL;SVLEN=-115 TR:VR 18:10 19:0 chr4 4106994 d_1409 G . PASS END=4107076;SVTYPE=DEL;SVLEN=-82 TR:VR 49:14 13:0 chr5 122172754 d_1579 C . PASS END=122172828;SVTYPE=DEL;SVLEN=-74 TR:VR 34:7 18:0 chr5 89711442 d_1574 A . PASS END=89713249;SVTYPE=DEL;SVLEN=-1807 TR:VR 27:16 22:0 chr6 19906530 r_432_0 A A]chr8:133677888] . PASS SVTYPE=BND;MATEID=r_432_1 TR:VR 93:14 32:0 chr8 133677888 r_432_1 T T]chr6:19906530] . PASS SVTYPE=BND;MATEID=r_432_0 TR:VR 93:14 32:0 chr7 17055090 r_460_0 C C]chrX:11935543] . Too_low_VAF SVTYPE=BND;MATEID=r_460_1 TR:VR 139:3 43:0 chrX 11935543 r_460_1 T T]chr7:17055090] . Too_low_VAF SVTYPE=BND;MATEID=r_460_0 TR:VR 139:3 43:0 chr9 23570911 r_517 C . PASS END=23682207;SVTYPE=DUP;SVLEN=111296 TR:VR 75:18 38:0 chr1 209254618 r_45 C . PASS END=209308512;SVTYPE=DEL;SVLEN=-53894 TR:VR 53:21 34:0 chr11 82643955 r_92 A . PASS END=82719619;SVTYPE=DUP;SVLEN=75664 TR:VR 86:7 37:0 chr12 96007739 r_131 T . PASS END=96118994;SVTYPE=DUP;SVLEN=111255 TR:VR 141:13 38:0 chr13 80706311 i_202 C . PASS END=80706311;SVTYPE=INS;SVINSLEN=395;SVINSSEQ=CCCCCTGACTCTTAGGACCCCCATCGCACTGGGGGGAGGCACCCCCCACGAGGCAGGGACTGAGAGCTCCAGCCCCTCTTCCCCCCCGGCTCTTAGGACCCCCATTGCAGGGGTGGGAGGCACCCCCGCGAGGGGCGGGGACTGACAGCCAGCCCCTCTCCCCCCCCCAGGCTCTTGGGACCCCCATCGCAGGGGGGGATGCAACCCCCACGACGCGGGGACTGAGAGCCAGTCCCTCTTCCCCCCTGGCTCTTAGGGATCCCCATCGCACCAGGAGGAGGCCACCCCCGCGAGGCAGGGACTGAGAGCCAGCCACTTTTCCCCCCTTGACTCTTAGGACCCCCATCGCACTGGGGGGAGGCACTGCGGCAGGGACTCAGCCAGCCCCCCTCTTC TR:VR 58:5 21:0 chr14 92029924 d_449 G . PASS END=92031822;SVTYPE=DEL;SVLEN=-1898 TR:VR 32:13 18:0 chr15 52293088 r_185 G . PASS END=52379393;SVTYPE=DUP;SVLEN=86305 TR:VR 72:4 36:0 chr16 68129970 r_218 G . PASS END=68236381;SVTYPE=DUP;SVLEN=106411 TR:VR 93:10 26:0 chr17 17446637 r_230_0 C [chr17:17455364[A . PASS SVTYPE=BND;MATEID=r_230_1 TR:VR 26:15 21:0 chr17 17455364 r_230_1 A [chr17:17446637[A . PASS SVTYPE=BND;MATEID=r_230_0 TR:VR 26:15 21:0 chr18 70062269 d_870 C . PASS END=70062537;SVTYPE=DEL;SVLEN=-268 TR:VR 35:13 15:0 chr2 177717700 r_298_0 G ]chr4:84173487]G . PASS SVTYPE=BND;MATEID=r_298_1 TR:VR 90:19 36:0 chr4 84173487 r_298_1 G G[chr2:177717700[ . PASS SVTYPE=BND;MATEID=r_298_0 TR:VR 90:19 36:0 chr20 36040741 r_331 C . PASS END=36103066;SVTYPE=DUP;SVLEN=62325 TR:VR 60:8 35:0 chr4 431985 r_373 G . PASS END=465458;SVTYPE=DUP;SVLEN=33473 TR:VR 127:12 36:0 chr6 22024534 r_433 T . PASS END=22130718;SVTYPE=DUP;SVLEN=106184 TR:VR 120:17 31:0 chr7 18432414 d_1708 A . PASS END=18432537;SVTYPE=DEL;SVLEN=-123 TR:VR 72:4 16:0 chr8 83243790 d_1848 G . Too_small_size END=83243831;SVTYPE=DEL;SVLEN=-41;SVINSLEN=4;SVINSSEQ=TAGA TR:VR 83:13 21:0 chr9 31094346 r_518 C . PASS END=31555540;SVTYPE=DUP;SVLEN=461194;SVINSLEN=50;SVINSSEQ=AGAGAGATTTTAAAGAGAGATTTTAAAGAGAGATTTTAAAGAGAGATTTT TR:VR 73:20 33:0 chrX 47173757 d_2050 G . PASS END=47173867;SVTYPE=DEL;SVLEN=-110 TR:VR 31:9 20:0 chr10 110936008 r_64_0 A ]chr6:128772516]C . PASS SVTYPE=BND;MATEID=r_64_1 TR:VR 75:11 27:0 chr6 128772516 r_64_1 C C[chr10:110936008[ . PASS SVTYPE=BND;MATEID=r_64_0 TR:VR 75:11 27:0 chr11 82763084 d_316 A . PASS END=82765053;SVTYPE=DEL;SVLEN=-1969 TR:VR 34:8 20:0 chr12 96221597 r_132 T . PASS END=96264271;SVTYPE=DEL;SVLEN=-42674 TR:VR 92:11 26:0 chr13 83030362 d_414 T . Too_small_size END=83030401;SVTYPE=DEL;SVLEN=-39;SVINSLEN=3;SVINSSEQ=TAG TR:VR 37:11 17:0 chr14 93875923 r_166_0 G G[chr20:12862273[ . PASS SVTYPE=BND;MATEID=r_166_1 TR:VR 84:12 30:0 chr20 12862273 r_166_1 C ]chr14:93875923]C . PASS SVTYPE=BND;MATEID=r_166_0 TR:VR 84:12 30:0 chr15 53197303 d_594 G . Too_small_size END=53197342;SVTYPE=DEL;SVLEN=-39 TR:VR 28:10 16:0 chr16 68441143 r_219_0 A ]chr3:121400160]T . PASS SVTYPE=BND;MATEID=r_219_1 TR:VR 103:16 45:0 chr3 121400160 r_219_1 T T[chr16:68441143[ . PASS SVTYPE=BND;MATEID=r_219_0 TR:VR 103:16 45:0 chr18 70487211 r_256 T . PASS END=70494074;SVTYPE=DEL;SVLEN=-6863;SVINSLEN=1;SVINSSEQ=G TR:VR 41:20 21:0 chr2 177717703 d_1095 T . PASS END=177718320;SVTYPE=DEL;SVLEN=-617 TR:VR 63:16 16:0 chr2 241457585 i_680 A . PASS END=241457585;SVTYPE=INS;SVINSLEN=815;SVINSSEQ=CCCAGTGTAGAAAGATCTGGGTGCTAAGGGAGGGTGCACTAAGGACCGCTTTGGGTTCTGGAGAGGCTCTTGGGCAGGAGGCCCAGTGTAGAAAGATCTGGGTGCTAAGGGAGGGTACACTAGGGACCGCTTTGGGTTCCGGAGAGGCTCTTGGGAGTGGGAGACCCAGTGTAGAAAGATCTGGGTGCTAAGGGAGGGTGCACTAAGGACCGCTTTGGGTTCTGGAGAGGCTCTTGGGCCGGGAGACCCAGTGTAGAAACATCTGGGTGCTAAGGGGAGGGTACACTAGGGACCGCTTTGGGTTCCGGAGAGGCTCTTGGGCAGGAGACCCAGTGTAGAAAGATCTGGGTGCTAAGGGAGGGTGCACTAAGGACCGCTTTGGGTTCTGGAGAGGCTCTTGGGCAGGAGGCCCAGTGTAGAAAGATCTGGGTGCTAAGGGAGGGTACACTAGGGACCGCTTTGGGTTCCGGAGAGGCTCTTGGGCGGGAGACCCAGTGTAGAAAGATCTGGGTGCTAAGGGAGGGTGCACTAAGGACCGCTTTGGGTTCCGGAGAGGCTCTTGGGCGGGAGACCCAGTGTAGAAAGATCTGGGTGCTAAGGGAGGGTGCACTAAGGACCGCTTTGGGTTCTGGAGAGGCTCTTGGGCGGGAGACCCAGTGTAGAAACATCTGGGTGCTAAGGGAGGGTGCACTAGGGACCGCTTTGGGTTCCCGGAGAGGCTCTGGGCGGGAGACCCAGTGTAGAAAGATCTGGGTGCTAAGGGAGGGTGCACTAAGGACCGCTTTGGGTTCTGGAGAGGCTCTTGGGCAGGAGGC TR:VR 28:7 13:0 chr4 4392313 d_1410 T . Too_low_VAF END=4411281;SVTYPE=DEL;SVLEN=-18968;SVINSLEN=4;SVINSSEQ=CATA TR:VR 66:3 26:0 chr6 23620256 i_1087 C . PASS END=23620256;SVTYPE=INS;SVINSLEN=594;SVINSSEQ=AGGGAGGGGAGAGAGAGAGAGGGAGGGGGGACAGAGAGAGAGGGAGGGGGACAGAGAGAGAGGGAGGGGGGGACAGAGAGAGGGAGGGAGAGAGAGGGAGGGAGGGAGAGAGAAAGAGAGAGGGAGGGAGAGAGAAAGAGAGAGAGGGAGGGAGGGAGAGACACTGAGGGAGGGGGAGGGAGAGAGAGAGGGAGGCAGAGAGAAAGAGAGAGGGAGGGAGGCAGAGAGAAAGAGAGGGAGGGAGGCAGAGAGAAAGAGAGGGAGGGAGGCAGAGAGAAAGAGAGGGAGGGAGGGAGAGAGAAAGAGAGGGAGGCAGGGGAGAGAGAGGGAGGGAGAGGGAGGGAGAGAGAGGGAGGGAGGGAGGTAGAGAGAGAGAGAGAGAGGGAGGGAGGGAGAGAGGGAGGGAGGGAGATAGGGAGGGAGAGGGAGGGAAGGAGAGAGGGAGGGAGGGAGAGAGGGAGGGAGGGAGATAGAGAGGGAGGGAGGGAGATAGAGAGGGAGGGAGGGAGATAGAGAGGGAGGGAGATAGGGAGGGAGGCAGATAGAGAGGGAGGGAGGCAGATAGGGAGGGAGGGAGAGAGAGGGAGGGAGGGA TR:VR 62:9 18:0 chr8 85578642 r_502 C . Too_low_VAF END=85825230;SVTYPE=DUP;SVLEN=246588;SVINSLEN=12;SVINSSEQ=AAAACTGGATTT TR:VR 568:4 138:0 chrX 12513739 i_1499 G . PASS END=12513739;SVTYPE=INS;SVINSLEN=264;SVINSSEQ=TTGTTGTTGTTGTTATTGTTTGTTTTTGAGCCAAGGTGTCACTCTTGTCACCCAGGCTGTAGTGCAGTGGTGTGTTCTCAGCACACTGCATCCTCCTCCTCCAGGCTCAAGTGATCCTCCCACCTCAGCTTCCTGAGTAGCAGGGATTACAGATGTGTGCCACCATGCCCAGCTAATTTTTGTATTTTAGTAGCAACTAATTTTTGTATTTTTAGTAGAGATGAGGTTTCACCATGTTGGCCAGGCTGGAAACGTAGTCTTTTC TR:VR 38:3 18:0 chrX 50660079 d_2051 G . Too_small_size END=50660125;SVTYPE=DEL;SVLEN=-46 TR:VR 34:14 20:0 chr10 112337849 d_267 T . PASS END=112337910;SVTYPE=DEL;SVLEN=-61 TR:VR 52:22 17:0 chr11 128092539 d_328 T . PASS END=128093231;SVTYPE=DEL;SVLEN=-692 TR:VR 32:3 17:0 chr11 84268535 d_317 C . PASS END=84268591;SVTYPE=DEL;SVLEN=-56 TR:VR 30:8 20:0 chr12 96838775 d_382 G . PASS END=96838945;SVTYPE=DEL;SVLEN=-170 TR:VR 51:5 18:0 chr13 87281326 r_152 A . PASS END=87669875;SVTYPE=DEL;SVLEN=-388549 TR:VR 58:18 38:0 chr15 54408732 d_595 C . Too_small_size END=54408767;SVTYPE=DEL;SVLEN=-35 TR:VR 42:22 13:0 chr16 68462745 r_220_0 G G[chr3:121392611[ . PASS SVTYPE=BND;MATEID=r_220_1 TR:VR 95:20 38:0 chr3 121392611 r_220_1 G ]chr16:68462745]G . PASS SVTYPE=BND;MATEID=r_220_0 TR:VR 95:20 38:0 chr17 20710160 r_231_0 T [chr17:36154433[TAGAAG . PASS SVTYPE=BND;MATEID=r_231_1;SVINSLEN=5;SVINSSEQ=TAGAA TR:VR 58:3 39:0 chr17 36154433 r_231_1 G [chr17:20710160[TTCTAG . PASS SVTYPE=BND;MATEID=r_231_0;SVINSLEN=5;SVINSSEQ=TTCTA TR:VR 58:3 39:0 chr2 177718289 r_299_0 G GC]chr4:84179128] . PASS SVTYPE=BND;MATEID=r_299_1;SVINSLEN=1;SVINSSEQ=C TR:VR 91:19 41:0 chr4 84179128 r_299_1 G GG]chr2:177718289] . PASS SVTYPE=BND;MATEID=r_299_0;SVINSLEN=1;SVINSSEQ=G TR:VR 91:19 41:0 chr20 28512720 r_325_0 A ]chr9:86163117]GTAGACAGCAGCATTCTCAGAAACTTCTTTGTGATATTGGCATTCAATTCACAGAGTTGAACATTCCCTTTCATAGAGCAGGTTTGAAACACTCCTTTTGTAGTATCTGGAAGTGGACATTTGGAGAACGTTGAGGTCTATGGTGAAA . Too_low_VAF SVTYPE=BND;MATEID=r_325_1;SVINSLEN=147;SVINSSEQ=GTAGACAGCAGCATTCTCAGAAACTTCTTTGTGATATTGGCATTCAATTCACAGAGTTGAACATTCCCTTTCATAGAGCAGGTTTGAAACACTCCTTTTGTAGTATCTGGAAGTGGACATTTGGAGAACGTTGAGGTCTATGGTGAA TR:VR 122:3 54:0 chr9 86163117 r_325_1 A ATTCACCATAGACCTCAACGTTCTCCAAATGTCCACTTCCAGATACTACAAAAGGAGTGTTTCAAACCTGCTCTATGAAAGGGAATGTTCAACTCTGTGAATTGAATGCCAATATCACAAAGAAGTTTCTGAGAATGCTGCTGTCTAC[chr20:28512720[ . Too_low_VAF SVTYPE=BND;MATEID=r_325_0;SVINSLEN=147;SVINSSEQ=TTCACCATAGACCTCAACGTTCTCCAAATGTCCACTTCCAGATACTACAAAAGGAGTGTTTCAAACCTGCTCTATGAAAGGGAATGTTCAACTCTGTGAATTGAATGCCAATATCACAAAGAAGTTTCTGAGAATGCTGCTGTCTAC TR:VR 122:3 54:0 chr3 166750795 d_1362 G . Too_low_VAF END=166768295;SVTYPE=DEL;SVLEN=-17500 TR:VR 74:3 25:0 chr5 31531403 r_404 T . PASS END=32243881;SVTYPE=DUP;SVLEN=712478 TR:VR 85:13 37:0 chr5 98039027 d_1575 T . Too_small_size END=98039068;SVTYPE=DEL;SVLEN=-41 TR:VR 29:16 16:0 chr6 23620319 i_1088 G . PASS END=23620319;SVTYPE=INS;SVINSLEN=437;SVINSSEQ=GAGATAGGGAGGGAGGGGGGAGAGGAGAGAGGGAGGGAGAGGAGAGAGAGAGGAGGGAGGGAGGGAGAGAGAGAGAGGGAGGGAGGGAGAGAGGGAGGGAGGGAGAGAGAGAGGGAGGGAGAGAGAGAGAGAGAGGGAGGAGAGAAAGAGAAAAAGAGAGAAAGAGGGAGATAGGGAGAGAGAGAGATAGAGAGGGAGAGGGAGGGAGAGAGGGAGGGAGGAAGAGAGAGAAAGAGAGAGAAAAAAAAAAAAAGAAAGAAGGAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAGGGGAAAAAAAAAAAGAAAGAAAGAAAGAGGGGAAAGAAAGAAAGAAAGAGGGGAAAGAAAGAGAAAAAGAGAGAGAGAGAGAGAGAGAAAAAAAAAAAGAAAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGAGAG TR:VR 61:8 18:0 chr7 14211852 d_1704 G . PASS END=14212211;SVTYPE=DEL;SVLEN=-359;SVINSLEN=39;SVINSSEQ=ATATTTACTCTCATGTTTTGTGATTTTACTCTCATGTTT TR:VR 55:3 14:0 chr1 2667004 d_8 A . Too_low_VAF END=2667422;SVTYPE=DEL;SVLEN=-418;SVINSLEN=59;SVINSSEQ=GCACCCACACCCGCAGGTGAGCATCTGATTGTCTGGAGCAGCAACCCACACCCACAGGT TR:VR 246:3 78:0 chr10 112706598 r_65 G . PASS END=112709888;SVTYPE=DUP;SVLEN=3290;SVINSLEN=2;SVINSSEQ=GA TR:VR 35:4 16:0 chr11 128995053 d_329 A . PASS END=128995100;SVTYPE=DEL;SVLEN=-47 TR:VR 31:17 22:0 chr12 98689073 d_383 C . PASS END=98689931;SVTYPE=DEL;SVLEN=-858 TR:VR 56:16 14:0 chr13 95016920 d_415 G . PASS END=95017823;SVTYPE=DEL;SVLEN=-903;SVINSLEN=1;SVINSSEQ=C TR:VR 38:16 14:0 chr14 96376256 d_450 G . PASS END=96376866;SVTYPE=DEL;SVLEN=-610 TR:VR 21:13 17:0 chr15 55421287 r_186_0 A [chr6:64323090[T . PASS SVTYPE=BND;MATEID=r_186_1 TR:VR 69:12 38:0 chr6 64323090 r_186_1 T [chr15:55421287[T . PASS SVTYPE=BND;MATEID=r_186_0 TR:VR 69:12 38:0 chr18 70762310 r_257 A . PASS END=70781843;SVTYPE=DEL;SVLEN=-19533 TR:VR 44:13 27:0 chr2 178696311 d_1096 A . PASS END=178696407;SVTYPE=DEL;SVLEN=-96 TR:VR 35:14 16:0 chr22 11060243 d_1268 T . PASS END=11060668;SVTYPE=DEL;SVLEN=-425 TR:VR 235:15 90:0 chr3 169546262 r_366 A . PASS END=169552943;SVTYPE=DUP;SVLEN=6681 TR:VR 80:20 26:0 chr5 32114626 d_1548 A . PASS END=32114927;SVTYPE=DEL;SVLEN=-301 TR:VR 60:15 17:0 chr7 142450120 r_483 G . Too_low_VAF END=142526501;SVTYPE=DUP;SVLEN=76381 TR:VR 146:3 53:1 chr7 158148884 i_1251 C . Too_low_VAF END=158148884;SVTYPE=INS;SVINSLEN=2682;SVINSSEQ=CCCCTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCCACCACACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATGTCACGCCACGTGTCTTTCCCCCTTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCGCTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCACTGACACCCCATCTCACGCCACACGACTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCATTCCCCCTCACTGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCATCTCACGCCACGTGTCATTCCCCCTCACTGACACCCCATCTCACGCCACGTGTCTTTCCCCTTCACCCTGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCACTGACACCCCATCTCACGCCACGTTTCTTTCCCCCTCAATGACACCCCATCTCACGCCACACGTCTTTCCCCCTCACTGACACACCCCATCTCACGCCACGTGTCTTTCCCCCTTCAATGACACCCCATGTCACGCCACGTGTCTTTCCACCTCACTGACACCCCATCTCACGCCACGTGTCTTTCCCCCCTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACAACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCCGTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCTTTTCCCCTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACACGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACACGTCTTTCTCCCCTCAATGACATCCCCATCTCACGCCACGTGTCTTTCCCCCTCACTGACACCCCATCTCACACCACGTGTCTTTCCCCCTCACTGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCACTGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCAGGTGTCTTTCCCCCTCAGTGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCAGTGACACCCCATCTCACGCCACGTGTCTTTCCCCCCTCACTGACACCCCATCTCACGCCACGTGTCTTTCCCCTTCAATGACACCCCATCTCATGCCACGTGTCTTTCCCCCTCACCGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCACTGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACACGTCTTTCCCCCCTCACTGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCACCTCACGCCACGTGTCATTCCCCCTCACTGACACCCCATCTCACGCCACACGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCTTCAATGACACCCCATCTCACGCCACGTGTCTTTTCCCCCTCACTGACACCCCATCTACCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCAGGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCCACGCCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTGTTTCCCCCTCAATGACACCCCATCTCCACGCCACGTGTCTTTCCCCCTCAATGACACCACATCTCACGCCACACGTCTTTCCCCCTCATCTGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCACTGACACCCCATCTCACGCCACACGTCTTTCCCCCTCAATGACACCCCATCTCACGCCAGGTGTCATTCCCCCTCACTGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCACTGACACCCCATCTCACGCCACACGTCTTTCCCCCTCACTGACACCCCATCTCACGCCACACGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCATTCCCCCTCACTGACACCCCATCTCACGCCAAGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCATTTCCCCCTCACTGACACCCCATCTCACGCCACGTGTCATTCCCCCTCACCCTGACACCCCATCTCACGCCACTTGTCTTTCCCCCTCACTGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACACGTCTTTCCCCTCAATGACACCCCATCTCACGCCACACGTCTTTCCCCCTCACTGACACCCCATCTCACGCCACATGTCTTTCCCCGTCAATGACACCCCATCTCCACGCCACGTGTCTTTCCCCTTTAATGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCTTTC TR:VR 95:4 20:0 chr7 5879350 d_1694 C . Too_small_size END=5879394;SVTYPE=DEL;SVLEN=-44 TR:VR 44:15 17:0 chr10 113364552 d_268 A . PASS END=113364682;SVTYPE=DEL;SVLEN=-130;SVINSLEN=1;SVINSSEQ=A TR:VR 41:9 14:0 chr11 13312322 r_71 G . PASS END=13564835;SVTYPE=DUP;SVLEN=252513 TR:VR 73:14 35:0 chr11 8493709 r_70 G . PASS END=8507621;SVTYPE=DUP;SVLEN=13912 TR:VR 44:8 31:0 chr12 99003825 d_384 A . Too_small_size END=99003867;SVTYPE=DEL;SVLEN=-42 TR:VR 60:16 14:0 chr13 96270688 r_153_0 G G[chr5:168257683[ . Too_low_VAF SVTYPE=BND;MATEID=r_153_1 TR:VR 69:3 30:0 chr5 168257683 r_153_1 T ]chr13:96270688]T . Too_low_VAF SVTYPE=BND;MATEID=r_153_0 TR:VR 69:3 30:0 chr15 58844677 d_596 G . PASS END=58845121;SVTYPE=DEL;SVLEN=-444 TR:VR 27:10 26:0 chr16 34181219 i_320 A . Too_low_VAF END=34181219;SVTYPE=INS;SVINSLEN=375;SVINSSEQ=GACAGAAGGTTTCTGAGAAAATTCTTTGAGATGTGCTCATTCATCTCACAGATTTGAAGTGTTCTTTTCATTGACCAGTTTGGATAGAGTCTTTTTGTAGAATCTGCTTTGTGGATATTTGTGAGCCCTTTGAAGCCTATGGTGAAAAAGAAATATCTTCACACAAAAACTAGACAGAAAGTTTCTGAGAAACTTCGTTGTGATGTGTGCATTCATCCCAAAGAGTTGAACCTGTCTTTGGATTAAGCAGTTTGGAAACAGTCCTTTGTAGAATGTACAAAGGGATATTTGGAGATCCCTTTTTGGCCTATGGTGAAAAAGGAAATGTCTTCACATAAAAACTAGACAGAAGCATTCTGAGAAACTTCTTTTTGA TR:VR 109:5 37:1 chr16 7181204 d_618 T . Too_small_size END=7181239;SVTYPE=DEL;SVLEN=-35 TR:VR 21:15 14:0 chr2 179371040 d_1097 C . PASS END=179371102;SVTYPE=DEL;SVLEN=-62 TR:VR 47:15 14:0 chr20 36348039 r_332 C . PASS END=36471006;SVTYPE=DUP;SVLEN=122967 TR:VR 96:15 36:0 chr6 103524179 d_1649 T . PASS END=103524545;SVTYPE=DEL;SVLEN=-366 TR:VR 29:9 19:0 chr7 143344040 d_1770 A . PASS END=143344092;SVTYPE=DEL;SVLEN=-52;SVINSLEN=4;SVINSSEQ=AAGT TR:VR 77:26 18:0 chr7 95833316 r_475 T . PASS END=95930574;SVTYPE=DUP;SVLEN=97258 TR:VR 120:19 23:0 chr9 39566689 r_519_0 T [chr9:39571956[G . PASS SVTYPE=BND;MATEID=r_519_1 TR:VR 52:7 18:0 chr9 39571956 r_519_1 G [chr9:39566689[G . PASS SVTYPE=BND;MATEID=r_519_0 TR:VR 52:7 18:0 chr1 212944694 d_186 T . PASS END=212944745;SVTYPE=DEL;SVLEN=-51 TR:VR 33:3 12:0 chr11 91874537 d_319 G . PASS END=91874596;SVTYPE=DEL;SVLEN=-59 TR:VR 29:11 20:0 chr12 99440920 d_385 C . PASS END=99440988;SVTYPE=DEL;SVLEN=-68 TR:VR 38:21 24:0 chr13 97126338 d_416 C . PASS END=97126540;SVTYPE=DEL;SVLEN=-202 TR:VR 47:14 11:0 chr15 59401609 i_289 T . PASS END=59401644;SVTYPE=INS;SVINSLEN=78;SVINSSEQ=TTTTAATACTTTTAATACTTTTTAATACTTTTAATACTTTTAATACTTTTAATACTTCTGTTTCTCCCTGGGCACATA TR:VR 27:20 21:0 chr16 72786577 d_738 T . PASS END=72787232;SVTYPE=DEL;SVLEN=-655 TR:VR 65:20 17:0 chr20 37282607 d_1181 T . PASS END=37282686;SVTYPE=DEL;SVLEN=-79 TR:VR 37:17 23:0 chr5 128612913 d_1580 A . PASS END=128613017;SVTYPE=DEL;SVLEN=-104;SVINSLEN=1;SVINSSEQ=A TR:VR 25:3 18:0 chr6 10639139 d_1614 C . PASS END=10639205;SVTYPE=DEL;SVLEN=-66;SVINSLEN=2;SVINSSEQ=AA TR:VR 41:19 21:0 chr6 24780684 r_435 A . PASS END=24842282;SVTYPE=DEL;SVLEN=-61598 TR:VR 68:23 29:0 chr9 39566689 r_520_0 T [chr9:42328604[G . PASS SVTYPE=BND;MATEID=r_520_1 TR:VR 52:3 28:0 chr9 42328604 r_520_1 G [chr9:39566689[G . PASS SVTYPE=BND;MATEID=r_520_0 TR:VR 52:3 28:0