##fileformat=VCFv4.3 ##fileDate=20230618 ##source=nanomonsv-0.5.0 ##reference=/projects/jfan_prj/jfan_prj/Nanopore_Testing/2021_nanopore_sv_testing/scratch/depth_testing/POG/COLO829/hg38_no_alt.fa ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##FILTER= ##FILTER= ##FILTER= ##FILTER= ##FILTER= ##FILTER= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##ALT= ##ALT= ##ALT= ##FORMAT= ##FORMAT= #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT TUMOR CONTROL chr11 62109795 r_41_0 G ]chr9:20550036]C . PASS SVTYPE=BND;MATEID=r_41_1 TR:VR 47:19 14:0 chr9 20550036 r_41_1 C C[chr11:62109795[ . PASS SVTYPE=BND;MATEID=r_41_0 TR:VR 47:19 14:0 chr12 18462296 d_183 G . PASS END=18462379;SVTYPE=DEL;SVLEN=-83 TR:VR 22:4 17:0 chr13 28024890 r_66_0 C C]chr13:28350002] . PASS SVTYPE=BND;MATEID=r_66_1 TR:VR 24:7 20:0 chr13 28350002 r_66_1 G G]chr13:28024890] . PASS SVTYPE=BND;MATEID=r_66_0 TR:VR 24:7 20:0 chr4 59685032 r_201 A . PASS END=65859910;SVTYPE=DUP;SVLEN=6174878 TR:VR 68:9 29:0 chr9 16248915 r_250 C . PASS END=16292852;SVTYPE=DEL;SVLEN=-43937 TR:VR 59:27 25:0 chr11 62555817 r_42_0 T T[chr9:20550136[ . PASS SVTYPE=BND;MATEID=r_42_1 TR:VR 36:12 18:0 chr9 20550136 r_42_1 A ]chr11:62555817]A . PASS SVTYPE=BND;MATEID=r_42_0 TR:VR 36:12 18:0 chr13 28025093 r_67_0 A [chr13:28355918[A . PASS SVTYPE=BND;MATEID=r_67_1 TR:VR 21:5 21:0 chr13 28355918 r_67_1 A [chr13:28025093[A . PASS SVTYPE=BND;MATEID=r_67_0 TR:VR 21:5 21:0 chr14 76413355 r_74_0 C C]chr14:76633967] . PASS SVTYPE=BND;MATEID=r_74_1 TR:VR 67:13 18:0 chr14 76633967 r_74_1 T T]chr14:76413355] . PASS SVTYPE=BND;MATEID=r_74_0 TR:VR 67:13 18:0 chr4 59907617 r_202 T . PASS END=59934574;SVTYPE=DEL;SVLEN=-26957 TR:VR 51:15 25:0 chr9 17753457 r_251_0 T T]chr9:31131371] . PASS SVTYPE=BND;MATEID=r_251_1 TR:VR 45:9 25:0 chr9 31131371 r_251_1 T T]chr9:17753457] . PASS SVTYPE=BND;MATEID=r_251_0 TR:VR 45:9 25:0 chrX 76166583 r_267 G . PASS END=105134613;SVTYPE=DEL;SVLEN=-28968030 TR:VR 49:12 23:0 chr17_GL000205v2_random 18493 i_378 G . Too_low_VAF;Too_small_size END=18493;SVTYPE=INS;SVINSLEN=48;SVINSSEQ=CAGTGTTCTGGAATCTTATCTGACGGACAAATATTCAGACTAGGGAAG TR:VR 121:6 52:1 chr2 186931992 r_145_0 C C]chr7:51187875] . PASS SVTYPE=BND;MATEID=r_145_1 TR:VR 51:15 30:0 chr7 51187875 r_145_1 G G]chr2:186931992] . PASS SVTYPE=BND;MATEID=r_145_0 TR:VR 51:15 30:0 chr4 59917287 r_203 A . PASS END=59946685;SVTYPE=DUP;SVLEN=29398 TR:VR 36:16 21:0 chr6 168236564 i_948 G . PASS END=168236564;SVTYPE=INS;SVINSLEN=417;SVINSSEQ=CACATGTGATAACTAGGGGAGGAGGAGGCACGGTGTGATAACAAGGGGGAGGAGGAGCACATGTGATAACTAGGGGAGGAGGAGCACGGTGTGATAACTAGGGAGGAGGAGCACGGTGTGATAACTAGGGGAGGAGGAGCATGTGATAACTAGGGGAGGAGGAGCACGGTGTGATAACTAGGGGAGGAGGAGCACATGTGATAACTAGGGGAGGAGGAGCACGGTGTGATAACTAGGGGAGGAGGAGCACGGTGGTGATAACCAGGGGAGGAGGAGAGAGCACATGTGATAACTAGGGGAGGAGGAGCACGGTGTGATAACTAGGGGAGGAGGAGCACATGTGATAACTAGGGGAGGAGGAGCACATGTGATAACTAGGGGAGGAGGAGCACGGTGTGATAACAAGGGGAGGAGGCC TR:VR 24:9 17:0 chr6 59525282 i_935 G . Too_low_VAF END=59525282;SVTYPE=INS;SVINSLEN=368;SVINSSEQ=GACCATTTCTCTTGATAGAGCAGTTTTGAAACACTCTTTCTGTAGAATCTGCAAGTGGATAATTGGACCTCCTAGAGGCCTTCGTTGGAAACGGGATTTCTTCCTATAAACCCAGACAGAAGAATTCTCAGAGACTTCTTTGTGATGTGTGAATTCAACTCACAGTGTGGATCCTTCCTTTTGATAGAGCAGTTTTGAAACACTGTTTTTGTAGTATTTCCAAGCGGATATTTGGAACGCCTTGAAGCGTATGGTAGAAAAGGAAATATCTTCCCATAAAACCTAGACAGAACCAATCTCAGAAACGACTTTGTGATGTCTGCATTCAACTCACAGAGTTGAACATTTCTCTTGATAGAGCAGTTTTG TR:VR 442:4 135:1 chr9 27591427 i_1137 C . PASS END=27591457;SVTYPE=INS;SVINSLEN=187;SVINSSEQ=ACTGGATGCTGAGATGCAAAAATCTATACACAAGATCAATGAAACCAAGTATTGGTTCTTCAAAAGAATAAATAAGACAGACCACCCTAGCTATATTAACAAAGAAAAAAGGAGATCCAAATAAGTCCAATGAGAAATGACAATGATGATATTATAACTAATCCTACAGAAATCAAAAACTGCATGT TR:VR 8:3 10:0 chr11 63894464 r_43_0 A A]chr9:19968234] . PASS SVTYPE=BND;MATEID=r_43_1 TR:VR 23:4 20:0 chr9 19968234 r_43_1 C C]chr11:63894464] . PASS SVTYPE=BND;MATEID=r_43_0 TR:VR 23:4 20:0 chr15 31808257 d_425 C . PASS END=31808313;SVTYPE=DEL;SVLEN=-56;SVINSLEN=2;SVINSSEQ=TA TR:VR 14:5 15:0 chr4 59927104 r_204 A . PASS END=63800431;SVTYPE=DEL;SVLEN=-3873327 TR:VR 59:13 20:0 chr5 3756449 d_1052 G . PASS END=3756638;SVTYPE=DEL;SVLEN=-189 TR:VR 22:11 7:0 chrX 7844562 i_1249 A . PASS END=7844562;SVTYPE=INS;SVINSLEN=90;SVINSSEQ=GGAGTGAGGTGTGTGGGGAGGGAGGGAGGGAGGAAGAGGTGGTGTGGGAGGGAGGGAGGGAGGGAGGAAGAGGTGGTGTGTGGGGAGGGA TR:VR 43:4 18:0 chr11 63894831 r_44_0 G G[chr15:23816604[ . PASS SVTYPE=BND;MATEID=r_44_1 TR:VR 45:3 21:0 chr15 23816604 r_44_1 A ]chr11:63894831]A . PASS SVTYPE=BND;MATEID=r_44_0 TR:VR 45:3 21:0 chr4 63781605 r_205 T . PASS END=63800748;SVTYPE=DUP;SVLEN=19143 TR:VR 53:15 17:0 chr7 905411 i_973 G . PASS END=905411;SVTYPE=INS;SVINSLEN=65;SVINSSEQ=GAGAAAGGAGAAAGGGGAAAGGAGAAAGGAGAAAGGAGAAAGGAAAGAAAGGAGAAAGGAGAAAG TR:VR 40:5 6:0 chr9 31127549 r_252_0 A [chr9:31133425[A . PASS SVTYPE=BND;MATEID=r_252_1 TR:VR 32:11 19:0 chr9 31133425 r_252_1 A [chr9:31127549[A . PASS SVTYPE=BND;MATEID=r_252_0 TR:VR 32:11 19:0 chr11 63895670 r_45_0 T ]chr9:19972689]TCCTGTCCCC . PASS SVTYPE=BND;MATEID=r_45_1;SVINSLEN=9;SVINSSEQ=TCCTGTCCC TR:VR 37:18 20:0 chr9 19972689 r_45_1 C CGGGACAGGA[chr11:63895670[ . PASS SVTYPE=BND;MATEID=r_45_0;SVINSLEN=9;SVINSSEQ=GGGACAGGA TR:VR 37:18 20:0 chr17 26775199 d_578 C . PASS END=26775340;SVTYPE=DEL;SVLEN=-141;SVINSLEN=55;SVINSSEQ=GCCGCCGCGGTTTTTTTGCGCCCGCCGCCGCGGTTTTTTTGCTGCCCGCCGCCCC TR:VR 40:3 12:0 chr18 63516 r_110_0 T [chr3:198172705[G . Too_low_VAF SVTYPE=BND;MATEID=r_110_1 TR:VR 364:12 161:0 chr3 198172705 r_110_1 G [chr18:63516[G . Too_low_VAF SVTYPE=BND;MATEID=r_110_0 TR:VR 364:12 161:0 chr4 63793444 r_206 G . PASS END=63801749;SVTYPE=DEL;SVLEN=-8305;SVINSLEN=1;SVINSSEQ=C TR:VR 46:13 14:0 chr1 144103008 d_69 G . Too_low_VAF END=144103121;SVTYPE=INS;SVINSLEN=113;SVINSSEQ=GCTTGGCTGGCTTGGCTGCCTGGCCGGCTTGGCTGCCTTGGCTGTCTGGCCGGCTTGGTTGGCTGGCAGGCCGGCCGGCTTGGCTGGCTGGCTGGTTGGCTGGCTTGGCTGGC TR:VR 123:5 31:0 chr11 63896420 r_46_0 A A[chr20:3478479[ . PASS SVTYPE=BND;MATEID=r_46_1 TR:VR 51:18 23:0 chr20 3478479 r_46_1 A ]chr11:63896420]A . PASS SVTYPE=BND;MATEID=r_46_0 TR:VR 51:18 23:0 chr15 44784273 r_87 A . PASS END=45139244;SVTYPE=DEL;SVLEN=-354971 TR:VR 39:10 20:0 chr2 91505267 d_757 G . Too_low_VAF END=91505319;SVTYPE=DEL;SVLEN=-52 TR:VR 153:7 49:0 chr4 189281887 r_209 T . PASS END=189282424;SVTYPE=DEL;SVLEN=-537 TR:VR 38:3 9:0 chrX 86007008 d_1392 T . Too_small_size END=86007043;SVTYPE=DEL;SVLEN=-35 TR:VR 17:13 14:0 chr1 144103052 d_70 G . Too_low_VAF END=144103283;SVTYPE=DEL;SVLEN=-231;SVINSLEN=134;SVINSSEQ=GCTTGGCTGCCTTGGGTGGCTATCAGGCTTGGCTGGCTTGGCTGGCTGTCTGTCTTGGCTGGCTTGGCTGGCTGGCAGGCTTGGCTGGCTTGGCTCGCTGGCTGGCTGGCTGGCGGGCCTTTCTTGCTGGGTGG TR:VR 124:3 31:0 chr10 2501673 i_77 A . PASS END=2501673;SVTYPE=INS;SVINSLEN=190;SVINSSEQ=CCCGGCTCACCTCAAGAACAAAGCGCGGTTTCCTCCTAGTAATACTTCCTCCGGATCGTGCACGCGGTTCACCTCACCAACAAAGCGCGGTTTCCTCCCTCGCCATCCTTCCTCGTGGTCGCGCACCCGTTTCACCTCAACAACAAAGCGCGGTTTCCTCCCTCGCCATCCTTCCTCATGGTCGCGCACC TR:VR 26:4 12:0 chr11 64236758 r_47_0 G G[chrY:11066250[ . PASS SVTYPE=BND;MATEID=r_47_1 TR:VR 58:6 32:0 chrY 11066250 r_47_1 A ]chr11:64236758]A . PASS SVTYPE=BND;MATEID=r_47_0 TR:VR 58:6 32:0 chr15 49939453 i_280 C . PASS END=49939453;SVTYPE=INS;SVINSLEN=106;SVINSSEQ=TCAAAGACTTTACGAACACCTCTATGCCCACAAACTAGAAAATCCAGAGAAAACGGATAGAAATACAGATAGAAATTGATAGAAATACAGAAATAAAAACAATACT TR:VR 37:4 7:0 chr9 31857708 i_1139 A . PASS END=31857713;SVTYPE=INS;SVINSLEN=1957;SVINSSEQ=TTACCCATCCATGAGCATGGTATGTGTTTCCATTTGTTTGTGTCTTCTATGATTTCTCTTCCAGTGCTTTGTAGCTTTCCTTGTAGAGGTCTTTCACCTCCTTGGTTAGGTATATTCCTAAGTATTTTATTTATTTATTTTTTGCAGCTATTATGAAAGGGGTTGAGTTTTTTATTTGATTCTCCTCTTGGTCACTGTTGGTGTATAGAAGAGCTAATGATTTGTTTACATTAATCTTGTATCCAGAAACTTTGCTGAATTCTTTTATCAGTTCTAGGAGATTTCTGGAGGAGTCCTTAGGGTTTTCAAGGCAAACGATCATATTGTCAGCAAACAGGGACAGTTTGATTTCCTCTTGACCGATTTGGATGCCTTTTATCTCTTTCTCTTGTCTGATTGCTGTGGCTAGGACTTCCAGTACTATGTTGAAGAGGAGTGGTGAGAATGGGCATCCTTGTCTTGTTCCAGTTCTCAGAGGGAATGCTTTCAACCTTTCCCCATTCAGTATTAAGTTGGCTGTGGGTTTGTCATAGGTGGCTTTTATTACATTAAGGTATGTCTCTTGTATGCTGATTTTGCTGAGAGTTTTAATCATAACGGGATGCTAGATTTTGTCTATGGCTTTTTCTGCATCTATTGAGATGATCATGTGATTTTTGTTTTTAATTCTGATTATGCGGTAAATCACATTTATTGACTTGCATATGTTAAACCATCCCTGCGTCCCTGGTATGAAACCCACTTAATCATGGTGAATTATCTTTTTGATATGTTGTTGGATTCAGTTAGTTAGTATTTTGTTAAGGATTTTAGTATCTACGTTTATCAAGGATATTGGTCTGTAGTTTTCTTTTTTGGTTGTGTCCTTTCCTGATTTGGGTATTAGGGTGATGCTGGCTTCATAGAATGAATTCGGGAGGGTTCTTTTTTTCTCTATTTTGTGGAAATGTTTCAAAAGGATTCTTCTTTGAATGTTTGGTAGAATTCTGCTGTGAATCCGTCTGGTCCTGGACTTTTTTTTTGGTTGGTAATTTTTTAATTAATATTTCAATCTCACTGCTTGTTATTGGTCTGTTCAGGGTATCTAATTCTTCCTGATTTAAGCTAGGAGGGTTGTATATTTCCAGGAATTTATCCATCTCTCATAGGTGTTCTAGTTTATGTATGTAAAGGTGGTTCATAGTAGCCTTGCATGATCTTTTGTATTTTGTGGTGTCAGTTGTAATATCTCCTGTTTCATTTCCCAGTCTGGTAATTTGGATTTTCTCTCTTCTTTTCTTGGTCTATCAATCAAATATTCTTTTCAAAGAACCAGCTTTTTTTTCATTTCTTTTGTACTTTTTTCCTTTTTTTTTTTTTTCAATTTCGTTTAGTTCTGATCTGATCTTAGTTATTTCCTTTCTTCTACTGGGTTTGGGTTTGGTTTTTTCTTGTTTCTCTAGTTCCTTGAGGTGTGACCTTAGGTTGTCTATTTGTGCTCTTTCAGACTTTTTGATGTAGGCGTTTAGGGCTATGAACTTTCCTCTTAGCACCACCTTAACTGTATCCCAGAACGCAATCCCCATCAAAATACCACCATCATTCTTCACAGAGTTAGAAAAAACAATTCTAAAATTCATATGGAATCAAAACAGAGCCCGCAGAGCCAGAGCAAGACTAAGCAAAAAGAACTAATCTGGAGGCATCACACTACCTGATTTCAAACTATACTATAAGGCCATAGTCACCAAAACATCATGGTACTGGTATAAAAATAGGCACATACACCAATGGAACAAAATAGAGAACTCAGAAATAAACCCAAATACTTAAAGTCAACTGATGTTTGACAAAGCAAACAAAAACATAAAGTGGGGAAAGGACACCCTTTTCATCATATGATGCTGGGATAATTGGCTAGCCACATGTAGAATAATGAAACTGGATCCTCATCTCTCACCTTATGCAAAAATCAACG TR:VR 38:18 12:0 chr1 144328210 d_71 A . PASS END=144328400;SVTYPE=INS;SVINSLEN=208;SVINSSEQ=AATGAAATGATGAAATGAAATGAAATGTTGAGATGAAATGATGAAATGAAATGAAAGAATGAAATGAAATGATGAAATGAGATGAAATGAAATCATGAGATGAAATGATGAAATGATGAGATGAAATGAAATGATGAAATGATGAAATGTAATGAAATGATGAAATGGAATGATGAAATGAAATGATGAAATGAAATGGTGAAATGAA TR:VR 34:10 3:0 chr11 64237087 r_48_0 G ]chrY:11068188]G . PASS SVTYPE=BND;MATEID=r_48_1 TR:VR 48:3 33:0 chrY 11068188 r_48_1 G G[chr11:64237087[ . PASS SVTYPE=BND;MATEID=r_48_0 TR:VR 48:3 33:0 chr8 52860844 d_1222 G . PASS END=52861491;SVTYPE=DEL;SVLEN=-647 TR:VR 31:9 10:0 chrX 91081613 d_1394 T . Too_small_size END=91081649;SVTYPE=DEL;SVLEN=-36;SVINSLEN=1;SVINSSEQ=T TR:VR 20:10 6:0 chr22 31471621 r_159 A . PASS END=32478958;SVTYPE=DEL;SVLEN=-1007337 TR:VR 44:7 18:0 chr7 224520 d_1123 T . PASS END=224619;SVTYPE=INS;SVINSLEN=99;SVINSSEQ=TCTCTCACTGAGCAGAATGGCACCGTCACGGGGTCGCACGGCGGCTGTCCCCTGAGCCTTCTCTCATTGCGCAGAATGGCACCGTCACGGGGGTCGCAT TR:VR 32:4 11:0 chr12 37741573 i_162 G . PASS END=37741573;SVTYPE=INS;SVINSLEN=172;SVINSSEQ=GGTTGCCTGCTATCATCTCACAGACTTGAACCTTTCTCTTGATTGATCAGTTTGGAAACAGTCTTTTTGAAGTATCTGCTAATGGATATTTGGAGCACTTTGAAGCCAATGGTGAAAAAGAAAATATCTTCATATAAAAACTGGACAGAACCATTCTGAATAACTTCTTCAT TR:VR 35:3 7:0 chr2 222096223 d_787 T . PASS END=222096306;SVTYPE=DEL;SVLEN=-83 TR:VR 25:18 16:0 chr3 53538397 r_181 T . PASS END=66533369;SVTYPE=DEL;SVLEN=-12994972 TR:VR 51:7 16:0 chr8 64232489 i_1095 T . PASS END=64232489;SVTYPE=INS;SVINSLEN=53;SVINSSEQ=TGTGTGTGTGTGTGTGTGTGTGTGTACTGTGTGTGTGTGTGTGTGTGTGTGTA TR:VR 32:4 9:0 chr1 145539291 r_11 G . PASS END=184192126;SVTYPE=DEL;SVLEN=-38652835 TR:VR 74:17 22:0 chr12 37742486 i_163 A . PASS END=37742493;SVTYPE=INS;SVINSLEN=693;SVINSSEQ=ACAGTGTTTTCATAGAATCTTCAAAGGGATATACACAATGAATTGAGGTCTTTGGTGAAAAAAGAAATATATTCACATAAAAACTAGACAGAAACTTTCTGAGAAACTTCTTTTTGATGTTTGCATTCATCTGACAGAGTTAAACCTTTCTTTTGATTGAGCAATTTGGAAACAGTCTTTTTGTACAATACACACAGGAATATCCGTGAGCGGTTTGTGGCCTATGGTGAAAAAGGAAATATCTTTACATAAAAACTAGACAGAAGTATTCTGAGAAACATCTTTGTGATGTGTGCATTCATCTCACAGAGTTGAACTTTTCTTTTGATTAAGCAGTTTTGAAACAATCTTTTTCTAGAATCTGCACACGGATATTTGTGAGTGGTTTGAGGCCTATGGTGAAATAGGAAATATCTCCACGTAAAAACGAGACAGAAATTATGTAAAACTTCTTTGGGAAGTTTGCATTCATCTCACAGTGTTGACTATTTCTTTTCATTGATCAGTTTGGAAACAGTCTTTTTGTACAATCTGCAAAGGGATATTTCTGAGTGGTTTAAGAACTATGGTGAAAAAGGAAATATCTTCACTTAAAAACTAGGCAGAAGCATTCTGAGAAACTTCTTTGTGATATGTGCATTCATCTCATAGAGATGAATATGTCTTTTGATTGAGCAGTTTAGAAACAGATGT TR:VR 35:5 7:0 chr2 109299388 d_771 C . Too_small_size END=109299428;SVTYPE=DEL;SVLEN=-40 TR:VR 24:7 3:0 chr3 10947 i_763 C . Too_low_VAF;Too_small_size END=10948;SVTYPE=INS;SVINSLEN=20;SVINSSEQ=AACCCTAACCCTAACCCCAA TR:VR 278:5 151:1 chr3 53545580 r_182_0 C [chr3:99923224[C . PASS SVTYPE=BND;MATEID=r_182_1 TR:VR 62:10 22:0 chr3 99923224 r_182_1 C [chr3:53545580[C . PASS SVTYPE=BND;MATEID=r_182_0 TR:VR 62:10 22:0 chr1 145539297 r_12_0 T ]chr21:9751875]C . PASS SVTYPE=BND;MATEID=r_12_1 TR:VR 138:13 41:0 chr21 9751875 r_12_1 C C[chr1:145539297[ . PASS SVTYPE=BND;MATEID=r_12_0 TR:VR 138:13 41:0 chr1 248945750 i_56 G . PASS END=248945750;SVTYPE=INS;SVINSLEN=496;SVINSSEQ=TTAGGGTTAAGGGTTAGGGTTAGGGGAGGGCCAGGGCCATGGGCAGGGGCAGGCTGCGCGGGGCCAGGGCCAGGGCCAGGGCCCGGGCCCGGGCCCGGGCCAGGGCCTTAGCAGGCGGGGCCAGGGCCAGGGCCAGGGCCAGGGCCAGGCCAGGGCCAGGCCAGGGCCAGGCCAGGGCCAGGCCAGGCCAGGGCCAGGGCCAGGCCAGGGCCAGGCGCGCGGGCCAGGGCCAGGGCCAGCGGTCAGGGTTAGGGCCAGGGCCGGGCCAGGGCCAGGGCCAGGGCTAGGGCCAGGGCCAGGGCCAGGGCCAGGCCTGGCGCTGTCAGGGTCAGGGCCAGGCCAGGGCCAGTCAGGGCCAGGGCCAGGGCCAGGGCCAGGGGCCAGGGTCAGGTGAGGCCACAGGCAGGGCCCAGGGCCAGGGTTAGGGCCAGGGTTAGGGTTAGGGTTGGGGGCCAGGGTTAGGGTTAGGGTTAGGGCCAGGGCCAGGGTTAGGGTT TR:VR 150:8 118:0 chr11 12327716 r_28_0 C C]chr19:54189615] . PASS SVTYPE=BND;MATEID=r_28_1 TR:VR 57:9 22:0 chr19 54189615 r_28_1 C C]chr11:12327716] . PASS SVTYPE=BND;MATEID=r_28_0 TR:VR 57:9 22:0 chr11 84459099 r_50 A . PASS END=84534842;SVTYPE=DEL;SVLEN=-75743 TR:VR 20:10 27:0 chr2 110984770 d_772 G . Too_small_size END=110984805;SVTYPE=DEL;SVLEN=-35 TR:VR 21:14 11:0 chr3 55981074 r_183 A . PASS END=66527589;SVTYPE=DUP;SVLEN=10546515 TR:VR 52:13 17:0 chrX 96639 d_1360 A . PASS END=96746;SVTYPE=INS;SVINSLEN=107;SVINSSEQ=ATGAGACCTAGGCCCAATGCAGACTCTAAAGGTTGCACAGTCTGCTCTCTATTTGTCCTCAATGAGACCCAGGCCCAATGCAGACTCTAAAGGTTGCACAGTCTGCT TR:VR 23:4 3:0 chr11 12327673 r_29_0 T [chr19:54189632[AAACCTTTATACTTTTTCATTTCCTCATCTAAAATGGGGATAATGTGGTTTTCTCCTTTATAGAACTGATATAAGCCACCTCTCCACTGGCTAACATGAATGTTCTTTGCAATTCAAGGATTAAGATAAATTCAGGAGAAATATATGGGTATTGGAGCAGTGTTGGTAGTAATTCAAAACTCAGAGTGAGAGTCAATGTCCTGGTTTG . PASS SVTYPE=BND;MATEID=r_29_1;SVINSLEN=207;SVINSSEQ=AAACCTTTATACTTTTTCATTTCCTCATCTAAAATGGGGATAATGTGGTTTTCTCCTTTATAGAACTGATATAAGCCACCTCTCCACTGGCTAACATGAATGTTCTTTGCAATTCAAGGATTAAGATAAATTCAGGAGAAATATATGGGTATTGGAGCAGTGTTGGTAGTAATTCAAAACTCAGAGTGAGAGTCAATGTCCTGGTTT TR:VR 57:5 22:0 chr19 54189632 r_29_1 G [chr11:12327673[AAACCAGGACATTGACTCTCACTCTGAGTTTTGAATTACTACCAACACTGCTCCAATACCCATATATTTCTCCTGAATTTATCTTAATCCTTGAATTGCAAAGAACATTCATGTTAGCCAGTGGAGAGGTGGCTTATATCAGTTCTATAAAGGAGAAAACCACATTATCCCCATTTTAGATGAGGAAATGAAAAAGTATAAAGGTTTG . PASS SVTYPE=BND;MATEID=r_29_0;SVINSLEN=207;SVINSSEQ=AAACCAGGACATTGACTCTCACTCTGAGTTTTGAATTACTACCAACACTGCTCCAATACCCATATATTTCTCCTGAATTTATCTTAATCCTTGAATTGCAAAGAACATTCATGTTAGCCAGTGGAGAGGTGGCTTATATCAGTTCTATAAAGGAGAAAACCACATTATCCCCATTTTAGATGAGGAAATGAAAAAGTATAAAGGTTT TR:VR 57:5 22:0 chr22 35907151 r_160 T . PASS END=35971466;SVTYPE=DEL;SVLEN=-64315 TR:VR 57:9 25:0 chr3 55984805 r_184_0 G [chr3:55997367[A . PASS SVTYPE=BND;MATEID=r_184_1 TR:VR 27:5 10:0 chr3 55997367 r_184_1 A [chr3:55984805[A . PASS SVTYPE=BND;MATEID=r_184_0 TR:VR 27:5 10:0 chrX 98153985 d_1395 A . PASS END=98154031;SVTYPE=DEL;SVLEN=-46;SVINSLEN=5;SVINSSEQ=GAATA TR:VR 20:8 9:0 chr3 55991366 r_185_0 T [chr3:66495645[T . PASS SVTYPE=BND;MATEID=r_185_1 TR:VR 47:15 21:0 chr3 66495645 r_185_1 T [chr3:55991366[T . PASS SVTYPE=BND;MATEID=r_185_0 TR:VR 47:15 21:0 chr4 93152828 d_1019 G . PASS END=93157472;SVTYPE=DEL;SVLEN=-4644 TR:VR 31:3 18:0 chr9 43192326 i_1142 A . PASS END=43192326;SVTYPE=INS;SVINSLEN=172;SVINSSEQ=TATCTTCAGATAAGCACTAGATAGAAGCTTTCTCAGAAGCTACTTTGTGATGTGTACATTCATGTCACACAGCTGAACCTTTCTTTTTATAGAGCAGTTTAAGAACCCCCTTTTTGTAGAATCTGCATGTGGATATTTCGACCAGTTTGAGGTCTTCATTGGAAACGGGTAT TR:VR 39:5 18:0 chr18 79358393 d_631 C . PASS END=79358530;SVTYPE=DEL;SVLEN=-137;SVINSLEN=59;SVINSSEQ=TCTGGGTCTGGAGGTGTCTGTGTGAGGGGTGTCCTGGGTCTGGAGGTGTCCGTGTGAGG TR:VR 21:4 8:0 chr19 433227 i_428 C . PASS END=433227;SVTYPE=INS;SVINSLEN=1297;SVINSSEQ=CCCATTGTGAGCCTGTGATTGAGTGAGTGAGTGAGATCCCCCTGAGTGAGATCATGAGTGAGTGAGATCATGAGTGAGATCATGAGTGAGTGAGATCATGAGTGAGTGAGATCGTGACTGAGATCATGAGTCTGTGAGTGAGATCATGAGTGAGTGAGATCATGAGATCGTGAGTGAGATGATGAGTCTGAGTGAGATCGTGAGTCTGTGAGTGAGATAGTGAGTGAGACTGAGTGAGATCATGAGTCTGTGAGATAGTGAGCAAGTGAGTGAGATCGTGAGTCTGTGAGTGAGTGAAATCATGAGTGAGATCGTGAGCCTGTGAGATTGTGAGTGAGATTGTGAGTCTGTGAGTAAGTGAAATCATGGAGTGAGTGAGATCATGAGTGAGTCTGTGAGATCGTGAGATCGTCAGCCTGTGAGTGAGTGAAATCGTGAGTGAGATCGTGAGTCTGTGAGATCATGAGTGAGCGAAATCGTGAGATCGTGAGTCTGAGTGAGTCTGTGAGTGAGATTGTGAGAGATCGTAAGATATTGAGTAAAATCGTGAGTCTATGAGATCGTGAGATCATGAGTGAGATCGTGAGTGAGTCTGTGAGTGAGATCGTAAGTGGAATAGTGAGATCGTGAGTCTGTGAGATCGTGAGTGAAATCGTGAGTTATATCGTGAGTGAGTGAAATCGTGAGTGATATGAGTGAGATCGTGAGTGAGATCATGAGTCAGTGAGATCATGAGATCATGAATAAGTGAGATTGTGAGTGAGATCGTGAGATCGTCAGCTCTGTGAGTGAGTGAAATCGTGAGTGAGATCGTGAGTCTGTGAGTGAGATCATGAGTGAGCGAAATCGTGAGGAGATCGTGAGTCTGTGAGTGAGTCTGTGAGTGAGATTGTGAGAGATCGTAAGATCGTGAGTAAAATCGTGAGTCTATGAGATCGTGAGTGAGATCACGAGTGAGATCGTGAGTGAGTCTGTGAGTGAGATCGTAAGTGGAATCGTGAGATCGTGAGTCTGTGAGATCGTGAGTGAAATCGTGAGTTATATCGTGAGTGAGTGAAATCGTGAGTGATATGAGTGAGATCGTGAGTGAGATCATGAGTCAGTGAGATCATGAGATCATGAGTCAGTGAGATCATGAGATCATGAATGAGTAAATGAGATCGTGAGATCGTGAGAGAGTCTATGAGTGAGTGAGGATCATGAGGGGAGTGAGTGAGGGAGTCTGTGAGATCGTGAGTCTGTGAGTGAGATCATGAGTGACTTCGAGTCTGTGAGATCACGAGTGAATCTGTGAGAT TR:VR 50:5 9:0 chr2 87430878 d_720 A . Too_low_VAF;Too_small_size END=87430908;SVTYPE=DEL;SVLEN=-30 TR:VR 145:3 43:0 chr3 124924199 r_193_0 A [chr3:162006260[C . PASS SVTYPE=BND;MATEID=r_193_1 TR:VR 41:10 20:0 chr3 162006260 r_193_1 C [chr3:124924199[C . PASS SVTYPE=BND;MATEID=r_193_0 TR:VR 41:10 20:0 chr3 55997100 r_186_0 A A]chr3:66495349] . PASS SVTYPE=BND;MATEID=r_186_1 TR:VR 48:16 21:0 chr3 66495349 r_186_1 T T]chr3:55997100] . PASS SVTYPE=BND;MATEID=r_186_0 TR:VR 48:16 21:0 chr8 75869706 d_1224 A . PASS END=75869819;SVTYPE=DEL;SVLEN=-113 TR:VR 41:19 8:0 chr11 995758 r_27_0 C C[chr7:157776085[ . PASS SVTYPE=BND;MATEID=r_27_1 TR:VR 90:7 29:0 chr7 157776085 r_27_1 C ]chr11:995758]C . PASS SVTYPE=BND;MATEID=r_27_0 TR:VR 90:7 29:0 chr19 433393 i_429 A . PASS END=433404;SVTYPE=INS;SVINSLEN=1319;SVINSSEQ=CCAGAGCGCCCATTGTGAGCCTGTGATTGAGTGAGTGAGTGAGATCCTGAGTGAGATCATGAGTGAGTGAGATCATGAGTGAGATCATGAGTGAGTGAGATCATGAGTGAGTGAGATCGTGACTGAGATCATGAGTCTGTGAGTGAGATCATGAGTGAGTGAGATCATGAGATCGTAGGTGAGATGATGAGTCTGAGTGAGATCGTGAGTCTGTGAGTGAGATAGTGAGTCGTAAGAACTGAGTGAGATCATGAGTCTGGTGAGATAGTGAGCAAGTGAGTGAGATCGTGAGGAGTCTGTGAGTGAGTGAAATCATGAGTGAGATCGTGAGCCTGTGAGATTGTGAGTGAGATTGTGAGTCTGTGAGTAAGTGAAATCATGAGTGAGTGAGATCATGAGTGAGTCTGTGAGATCGTGAGATCGTCAGCCTGTGAGGATAGTGAAATCGTGGTGAGATCGTGAGTCTGTGAGATCATTGAGTGAGCGAAATCGTGAGATCGTGAGTCTGAGTGAGTCTGAGTGAGATTGTGAGATCGTAAGATATTGAGTAAAATCGTGAGTCTATGAGATCGTGAGATCATGAGTGAGATCGTGAGTGAGTCTGTGGAGTGAGATCGTAAAGTGGAATAGTGAGATCGTGAGTCTGTGAGATCGTGAGTGAAATCGTGAGTTATATCGTGAGTGAGTGAAATGAGTGATATGAGTGAGATCGTGAGTGAGATCATGAGTCAGTGAGATCATGAGATCATGAATAAGTGAGATTGTGAGTGAGATCGTGAGATCGTCAGCCTGTGAGTGAGTGAAATCGTGAGTGAGATCGTGAGTCTGTGAGTGAGATCATGAGTGAGCGAAATCGTGAGTGAGATCGTGAGTCTGTCTGTGAGTGAGTCTGTGAGTGAGATTGTGAGAGATCGTAAGATCGTGAGTGAAATCGTGAGTCTATGAGATCGTGGTGAGATCACGAGAGTGAGATCGTGAGTGAGTCTGTGAGTGAGATCGTAAGTGAGAGATGAGTGAGATCGTGGTAGAGTCTGTGAGATCGTGGTGAAATCGTGAGTTATATCGTGAGTGAGTGAAATCGTGAGTGATATGAGTGAGATCGTGAGTGAGATCATGAGTCAGTGAGATCATGAGATCTCATGAGTCAGTGAGATCATGAGATCATGAATGAGTAAATGAGATCGTGAGATCGTGATTGTGAGTCTATGAGTGAGTGAGATCATGAGGGAGTGAGTGAGGGAGTCTGTGAGATCGTGAGTCTGTGAGTGAGATCATGAGTGACTGAGTCTGTGAGATCACGAGTGAATCTGTGAGATCGA TR:VR 51:3 9:0 chr3 125766909 r_194_0 G G]chr8:12013862] . PASS SVTYPE=BND;MATEID=r_194_1 TR:VR 36:6 18:0 chr8 12013862 r_194_1 C C]chr3:125766909] . PASS SVTYPE=BND;MATEID=r_194_0 TR:VR 36:6 18:0 chr3 56008447 r_187_0 T T]chr3:99892334] . PASS SVTYPE=BND;MATEID=r_187_1 TR:VR 44:6 27:0 chr3 99892334 r_187_1 T T]chr3:56008447] . PASS SVTYPE=BND;MATEID=r_187_0 TR:VR 44:6 27:0 chr5 4846076 d_1053 G . PASS END=4846126;SVTYPE=DEL;SVLEN=-50 TR:VR 28:15 7:0 chr7 155407283 i_1039 G . Too_small_size END=155407283;SVTYPE=INS;SVINSLEN=44;SVINSSEQ=AGAGTGTGGGGTGTGGGTGTGTGAGTGTGGGCTGTGGGAGTGTG TR:VR 49:4 7:0 chr7 37292982 d_1154 C . PASS END=37293029;SVTYPE=INS;SVINSLEN=47;SVINSSEQ=ACCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCG TR:VR 49:3 11:0 chr8 81788771 d_1225 C . PASS END=81789968;SVTYPE=DEL;SVLEN=-1197 TR:VR 46:6 12:0 chr12 43846690 r_56 T . PASS END=44034021;SVTYPE=DEL;SVLEN=-187331 TR:VR 59:7 20:0 chr15 77109844 r_89 C . PASS END=77114112;SVTYPE=DEL;SVLEN=-4268;SVINSLEN=10;SVINSSEQ=ATGAAGAAGG TR:VR 37:7 21:0 chr16 84052208 i_322 C . PASS END=84052208;SVTYPE=INS;SVINSLEN=489;SVINSSEQ=AAGGCCCGCATGTGCGTAAGGAGAGCTGCAAGGGCCGCATGTGGGTAGAGGAGAGCTGCAAGGCCGCATGTGGGGTAGGAGAGCTGCAAGGGCCGCATGTGGGTAAGAGAGAGCTGCAAGGCCGGCATGTGGGTAAGGAGAGCTGCAAGGCCCCATGTGGGTAAGGAGAGCTGCAAGGCCCGCATGTGGGTGAGGAGGGCGGCGAGGCCCGCATGTGGGTAAGGAGAGCTGCAAGGCCCATGCTGTGCTTAAGGAGAGGCTGCAAGGCCGCATGTGGGTAAGGAGAGCTACAAGGCCGCATGTGTGGGTACCTGAGAGCTACAAGGCCCGCATGTGCTTAAGGAGAGCTGGGCAAAGTGCCGCATGTGGGTAAGGAGAGCTACAAGGCCTGCAATGGACGTAAAAGAACTGCAAGGAGTTGATCGGCCCAGTGGCTCCTCCCCTGCGTGGGCCGAGATGTTTTCTGCCCCGTGACCTGTGCTTCCTTGT TR:VR 39:5 9:0 chr4 190114231 r_210_0 C CACAACCCTAACCCTAACCCTAACCCTAACCCTACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAGCCCTAGCCCTAGCCCTAGCCCTAGCCCTAACCCTAACCCTAACCCTAACCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACCCTACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTCACCCTCACCCTCACCCTCACCCTC]chr4:190123117] . PASS SVTYPE=BND;MATEID=r_210_1;SVINSLEN=253;SVINSSEQ=ACAACCCTAACCCTAACCCTAACCCTAACCCTACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAGCCCTAGCCCTAGCCCTAGCCCTAGCCCTAACCCTAACCCTAACCCTAACCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACCCTACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTCACCCTCACCCTCACCCTCACCCTC TR:VR 153:12 86:1 chr4 190123117 r_210_1 T TGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTTAGGGTTAGGGTTAGGGTTAGGGCTAGGGCTAGGGCTAGGGCTAGGGCTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTGT]chr4:190114231] . PASS SVTYPE=BND;MATEID=r_210_0;SVINSLEN=253;SVINSSEQ=GAGGGTGAGGGTGAGGGTGAGGGTGAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTTAGGGTTAGGGTTAGGGTTAGGGCTAGGGCTAGGGCTAGGGCTAGGGCTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTGT TR:VR 153:12 86:1 chr7 38906011 d_1155 G . PASS END=38906112;SVTYPE=DEL;SVLEN=-101 TR:VR 45:20 7:0 chr1 155191706 i_28 C . PASS END=155191706;SVTYPE=INS;SVINSLEN=303;SVINSSEQ=GGTGGAGCCCGGGGCCGGCCTGGTGTCCGGGGCCGAGGTGACACCGTGGGCTGGGGGGCGGTGGAGCCCGGGGCCGGCCTGGTGTCCGGGGGCCGAGGTGACACCGTGGGCTGGGGGGCGGTGGAGCCCCGGGGCCGGCCTGCTCTCTCCGGGGCCGAGGTGACACCGTGGGCTGCGGGCGCGGTGGAGCCCGGGGCCGGCCTGCTCTCCGGGGCCGAGGTGACACCGTGGGCTGCGGGCGCGGTGTGGAGCCCGGGGCCGGCCTGCTCTCCGGGGCCGAGGTGACACCGTGGGCTGGGGGGG TR:VR 43:6 9:0 chr1 26139075 r_5_0 A ]chr15:99465127]A . PASS SVTYPE=BND;MATEID=r_5_1 TR:VR 49:20 20:0 chr15 99465127 r_5_1 A A[chr1:26139075[ . PASS SVTYPE=BND;MATEID=r_5_0 TR:VR 49:20 20:0 chr17 26843013 d_582 A . PASS END=26843922;SVTYPE=DEL;SVLEN=-909;SVINSLEN=108;SVINSSEQ=TGGAATGACTCGAATGGAATGGATTGGAAAAAATGGAATCGAACAGATTGGAATCGAATGGAACGTAATGGAATGGAATGGAATGGAATCAAATCGAATGGAATGGAG TR:VR 42:25 6:0 chr8 84426194 d_1226 C . PASS END=84426242;SVTYPE=DEL;SVLEN=-48 TR:VR 37:4 6:0 chr15 77136455 r_90 C . PASS END=77437727;SVTYPE=DEL;SVLEN=-301272 TR:VR 63:12 21:0 chr4 190122456 r_212_0 G ]chrUn_KI270744v1:116859]A . Too_low_VAF SVTYPE=BND;MATEID=r_212_1 TR:VR 237:3 110:1 chrUn_KI270744v1 116859 r_212_1 A A[chr4:190122456[ . Too_low_VAF SVTYPE=BND;MATEID=r_212_0 TR:VR 237:3 110:1 chr7 101136456 i_1014 G . Too_small_size END=101136456;SVTYPE=INS;SVINSLEN=39;SVINSSEQ=AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGACA TR:VR 55:7 7:0 chr1 26143845 r_7_0 C CCTTTAGGCAGATCCTAGACAAGGGTTACATCA[chrY:11324172[ . Too_low_VAF SVTYPE=BND;MATEID=r_7_1;SVINSLEN=32;SVINSSEQ=CTTTAGGCAGATCCTAGACAAGGGTTACATCA TR:VR 505:3 232:0 chrY 11324172 r_7_1 C ]chr1:26143845]TGATGTAACCCTTGTCTAGGATCTGCCTAAAGC . Too_low_VAF SVTYPE=BND;MATEID=r_7_0;SVINSLEN=32;SVINSSEQ=TGATGTAACCCTTGTCTAGGATCTGCCTAAAG TR:VR 505:3 232:0 chr2 116720758 i_574 T . PASS END=116720764;SVTYPE=INS;SVINSLEN=87;SVINSSEQ=CGCCCAAGACATGCAAGGACAAGCAAAACAAAATCTAACTGTCAGGACCCCATCATGAATTGGCTGTCCAACTGGCATTGGCGTTGG TR:VR 34:3 7:0 chr12 545793 i_151 A . PASS END=545793;SVTYPE=INS;SVINSLEN=361;SVINSSEQ=TGGGGAGGAGCGAGGAGGTGGAGAGGAGAGAGGAGGGGGAGGTGAGGGAGTGGGGAGGAGCGAGGAGTGGGGAGGTGAGAGGAGTGGGGAGGTGCGAGGAGTGGGGAGGTGAGAGGAGGTGGGGAGGTGAGAGGAGTGGGGAGGTAAGAGGAATGGGGAGGAGCGAGGAGTGGGGAGGAGTGAGGAGTGGGGGAGGTGAGAGGGAGTGGGGAGGTAAGAGGAATGGGGAGGAGCGAGGAGTGGGGAGGAGTGAGGAGTGGGGGAGGTGAGAGGAGTGGGGAGGTAAGAGGAATGGGGAGGAGCGAGGAGTGGGGAGGAGAGAGGAGTGGGGAGGTGAGGAGTGAGGGAGGAGCGAGGGAGT TR:VR 20:5 11:0 chr21 21479583 i_688 C . Too_small_size END=21479583;SVTYPE=INS;SVINSLEN=41;SVINSSEQ=AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA TR:VR 37:3 13:0 chr12 58340993 d_187 G . PASS END=58341073;SVTYPE=DEL;SVLEN=-80 TR:VR 30:13 12:0 chr15 97227898 r_91_0 A A[chr19:42503220[ . PASS SVTYPE=BND;MATEID=r_91_1 TR:VR 67:11 19:0 chr19 42503220 r_91_1 T ]chr15:97227898]T . PASS SVTYPE=BND;MATEID=r_91_0 TR:VR 67:11 19:0 chr2 89789993 d_722 G . Too_small_size END=89789979;SVTYPE=INS;SVINSLEN=55;SVINSSEQ=ATTCTACTCGATTCCTTTTGATGATTGCATTTGATTCCATTCGATGATTCCGTTG TR:VR 55:6 12:0 chr21 22404161 d_882 A . PASS END=22406128;SVTYPE=DEL;SVLEN=-1967 TR:VR 39:18 17:0 chr9 708209 i_1131 A . PASS END=708209;SVTYPE=INS;SVINSLEN=230;SVINSSEQ=GTTTCAGACAGTCCTGGAGACAGGTCTGGCTGCTGCAGCTTCTCTCCTGTTAATGGAGTTTCCAGACAGTCCTGGAGACAGGTCTGGCTGCTGCAGCTTCTCTCCTGTTAATGGAGGTTTCAGACAGTCCTGGAGACAGGTCTGGCTGCTGCAGCTTCTCTCCTGTTAATGGAGTTTCAGACAGTCCTGGAGACAGGTCTGGCTGCTGCAGCTTCTCTCCTGTTAATAGA TR:VR 26:7 9:0 chr12 58597974 i_167 A . Too_small_size END=58597974;SVTYPE=INS;SVINSLEN=39;SVINSSEQ=CACATATATATATATATACACATATATATATATATATAC TR:VR 25:7 11:0 chr15 97227902 r_92_0 T ]chr19:42503223]A . PASS SVTYPE=BND;MATEID=r_92_1 TR:VR 67:19 19:0 chr19 42503223 r_92_1 A A[chr15:97227902[ . PASS SVTYPE=BND;MATEID=r_92_0 TR:VR 67:19 19:0 chr19 4663677 i_461 T . Too_small_size END=4663677;SVTYPE=INS;SVINSLEN=38;SVINSSEQ=CCCCACCTCATCCTCATTCTACAGCCTCCCATTATCCC TR:VR 28:3 8:0 chr2 121947319 r_133_0 G G[chr3:151093750[ . PASS SVTYPE=BND;MATEID=r_133_1 TR:VR 46:6 22:0 chr3 151093750 r_133_1 A ]chr2:121947319]A . PASS SVTYPE=BND;MATEID=r_133_0 TR:VR 46:6 22:0 chr5 102023066 d_1075 T . PASS END=102026115;SVTYPE=DEL;SVLEN=-3049 TR:VR 29:5 12:0 chr6 2324971 d_1084 C . PASS END=2325436;SVTYPE=DEL;SVLEN=-465 TR:VR 36:4 11:0 chrUn_KI270757v1 66474 i_1210 A . Too_low_VAF END=66474;SVTYPE=INS;SVINSLEN=527;SVINSSEQ=CACGTATATTTATTGCGGCATTATTCACAAGAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGAATTAAGAAAATGTGGCATATATACACCATGGAATACTATGAAGCCATAAAAAATAATGAGTTCATGTCCTTTGTAGGGACATGGATGAAATTGGAAATCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAGTGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTTGTGGGGTAGGGTGAGGGGTGACGGATAGCATTGGGAGATATACCTAATGCTAGATGACGAGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTGACAAACCTGCACAATGTGCACATGTACCCTAAAACTTAAAGTATAATAAAAAAAAGAAAGTTTCAAAACTGCTGTATCACAAGATAGGTTCAACTCTGTGAGATGAATGCACACATCACAA TR:VR 268:4 98:0 chr1 30695112 d_3 A . Too_small_size END=30695151;SVTYPE=DEL;SVLEN=-39 TR:VR 19:18 9:0 chr15 99465141 r_93_0 A ]chr5:155103878]T . Too_low_VAF SVTYPE=BND;MATEID=r_93_1 TR:VR 83:4 18:0 chr5 155103878 r_93_1 T T[chr15:99465141[ . Too_low_VAF SVTYPE=BND;MATEID=r_93_0 TR:VR 83:4 18:0 chr2 121947389 r_134_0 C ]chr3:151093567]CTCT . PASS SVTYPE=BND;MATEID=r_134_1;SVINSLEN=3;SVINSSEQ=CTC TR:VR 45:17 22:0 chr3 151093567 r_134_1 T TGAG[chr2:121947389[ . PASS SVTYPE=BND;MATEID=r_134_0;SVINSLEN=3;SVINSSEQ=GAG TR:VR 45:17 22:0 chr3 158744184 d_972 C . Too_small_size END=158744219;SVTYPE=DEL;SVLEN=-35 TR:VR 12:8 9:0 chr3 76972592 r_188 T . PASS END=77585990;SVTYPE=DEL;SVLEN=-613398 TR:VR 42:5 23:0 chr4 26209917 i_816 C . PASS END=26209932;SVTYPE=INS;SVINSLEN=339;SVINSSEQ=TCCCTTCCCTCCCTCCCTCCCTTCCTCCTTCCTCCTTCCCTCCTTCCCTCCCTTTCTCCTTCCTCCTCTCCCTCCCTTCCTCCCTCCCTCCTTCCTCCCTTCCTCCTTCCCTCCTCCCTTCCTCCTTCCCTCCCTTCCCTCCCTCCCTTCCTTCTTTCTCCTTCCCTCCTCCCTCCCTCCCTCCCTCCTTCCCTCTCTCCCTCCCTTCCTCCTTCCCTCTCTCCCTCCCTTCCTCCTTCCCTTCCTCCCTCCTCCTTCCTCCTTCCTCCCTCCCCCTCCCTTCCTTCCTCCTTCCCTCTCTCCCTCCCTTCCTCCTTCCCTCTCTCCCTCCCTTCCTCC TR:VR 40:7 12:0 chr7 156267031 d_1196 G . PASS END=156267015;SVTYPE=INS;SVINSLEN=74;SVINSSEQ=AGCCTGTCTACACGGTGGAGATTGTCCTGTTTCTCCTCTGTGCTGAGTCTGTCTACACGGTGGAGACTGTCCTG TR:VR 36:9 11:0 chr1 167951197 d_80 A . PASS END=167951259;SVTYPE=DEL;SVLEN=-62 TR:VR 40:15 13:0 chr16 88207242 d_541 G . PASS END=88207235;SVTYPE=INS;SVINSLEN=116;SVINSSEQ=GGACGGAGGGGAGGGAGGCCGCGGGGACGGACGGGAGGGGAGGCCGCGGGGACGGACGGGAGGGGAGGCCGCGGGGACGGACGGGAGGGGAGGCCGCGGGGACGGAGGGGAGGGAG TR:VR 32:13 8:0 chr17 315254 d_559 T . Too_small_size END=315256;SVTYPE=INS;SVINSLEN=31;SVINSSEQ=ACTCCACGTCCATTGACCTGTAGTCTCTGTG TR:VR 40:4 17:0 chr1 169550214 d_81 T . PASS END=169550291;SVTYPE=DEL;SVLEN=-77 TR:VR 30:15 11:0 chr19 1282511 i_454 G . PASS END=1282511;SVTYPE=INS;SVINSLEN=56;SVINSSEQ=AGGGAGGGAGGTGGGGAGGGGAGGAGGGAGGGAGGGAGGGAGGGTGTGAAGGGAAG TR:VR 56:7 9:0 chr14 105956124 r_76_0 T [chr14:106757487[GA . Too_low_VAF SVTYPE=BND;MATEID=r_76_1;SVINSLEN=1;SVINSSEQ=G TR:VR 82:4 16:0 chr14 106757487 r_76_1 A [chr14:105956124[CA . Too_low_VAF SVTYPE=BND;MATEID=r_76_0;SVINSLEN=1;SVINSSEQ=C TR:VR 82:4 16:0 chr20 14975268 r_146 A . PASS END=15227246;SVTYPE=DEL;SVLEN=-251978;SVINSLEN=3;SVINSSEQ=TCG TR:VR 53:7 20:0 chr10 401993 i_65 T . PASS END=401993;SVTYPE=INS;SVINSLEN=248;SVINSSEQ=GTGAGGTAGTAGCATTAGCATTACTCTTCCTTATGGACAAGTTTGGTATGTGTTCATCAGCACATGAATCCTGTGATTTTACACGTGTGGTAGCATTAACATTACTCTTCCTTCTGGACAAGTTTGGTACATTTTCATCAGCCCATGAATCCCTGTGATTCTACATGTGTGGTAGTATTAGCATTACTCTTCCTTATGGACAAGTTTGGTACATTTTCATCAGCACATGAATCCTGTGATTTTACACG TR:VR 29:6 6:0 chr12 59541253 d_192 G . PASS END=59541346;SVTYPE=DEL;SVLEN=-93;SVINSLEN=15;SVINSSEQ=TCCACCCCCACTGTG TR:VR 28:6 19:0 chr2 123357210 i_576 C . PASS END=123357210;SVTYPE=INS;SVINSLEN=822;SVINSSEQ=ATATAATATATATATAAATTATATATTATACATATATTATATATATAAATTATATATTATACATATATAATATATATATAAATTATATATTATACATATATAATATATATATAAATTATATATTATACATATATAATATATATATATTATATATTATACATATATAATATATATATAATATATTATACATATATAATATATATATAATATATTATACATATATAATATATATATAATATATTATACATATATAATATATATATAATATATTATACATATATAATATATATATAATATATTATACATATATAATATATATATAATATATTATACATATATAATATATATATAATATATTATACATATATAATATATATATTATATATTATACATATATAATATATATATAAATTATATATTATACATATATAATATATATATAAATTATATATTATACATATATATATATATATAAATTATATATTATACATATATAATATATATATAAATTATATATTATACATATATAATATATATATAAATTATATATTATACATATATAATATATATATAAATATATATTATACATATATAATATATATATAAAATTATATATTATAGCATATATAATATATATAAATTATATATATTATACATATATAATATATATATAAATTATTATATATTATACATATATAATATATATAAATTATATATTATACATATATAATATATATAAATTATATATTATACATATATAATATATATAAATTATATATTATACATATAATATAGCATAAATATAAATTATATATTATGATA TR:VR 36:6 6:0 chr2 26333431 r_126_0 A ]chr4:89723827]AGGAGGGTGGGAAGCAC . PASS SVTYPE=BND;MATEID=r_126_1;SVINSLEN=16;SVINSSEQ=AGGAGGGTGGGAAGCA TR:VR 62:4 29:0 chr4 89723827 r_126_1 C CTGCTTCCCACCCTCCT[chr2:26333431[ . PASS SVTYPE=BND;MATEID=r_126_0;SVINSLEN=16;SVINSSEQ=TGCTTCCCACCCTCCT TR:VR 62:4 29:0 chr20 14995737 r_147 A . PASS END=15086748;SVTYPE=DEL;SVLEN=-91011;SVINSLEN=1;SVINSSEQ=T TR:VR 53:3 19:0 chr21 39583972 d_885 T . PASS END=39584021;SVTYPE=DEL;SVLEN=-49 TR:VR 44:7 8:0 chr7 49348844 d_1157 G . PASS END=49348970;SVTYPE=DEL;SVLEN=-126;SVINSLEN=14;SVINSSEQ=GCATCTCATTGTGG TR:VR 39:10 12:0 chrX 10880713 i_1253 T . Too_small_size END=10880713;SVTYPE=INS;SVINSLEN=45;SVINSSEQ=ATACATGTATATATGTACTATATATGTGTATACATATATTGTACA TR:VR 42:3 11:0 chr12 59544584 i_168 C . PASS END=59544584;SVTYPE=INS;SVINSLEN=80;SVINSSEQ=CCCTGTGATATGTTTCCTAATATCCGGGGGGGATGGACAGAGTGATATTACTCCCAATATCTCAGGGATGTACAAACCCC TR:VR 26:8 16:0 chr7 49649741 r_240_0 G [chrX:117823028[C . PASS SVTYPE=BND;MATEID=r_240_1 TR:VR 76:4 27:0 chrX 117823028 r_240_1 C [chr7:49649741[C . PASS SVTYPE=BND;MATEID=r_240_0 TR:VR 76:4 27:0 chr9 10472 d_1241 A . PASS END=10789;SVTYPE=INS;SVINSLEN=433;SVINSSEQ=CCCTAACCCTAACCCTAACCCTAACCCTAACCCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCCAACCCTAACCCTAACCCCTAACCCTAACCCTAACCCTAACCCTAAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTGACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCC TR:VR 44:7 20:0 chr11 1775293 i_123 G . PASS END=1775293;SVTYPE=INS;SVINSLEN=189;SVINSSEQ=GAGATGGGAGAGGGGATGGAGAGGGGATGGAGGAGGAGATGGAGAGGGGATGGAGAGGGGATGGAGAGGGGATGGAGAGGGGGATGGAGAGGGGGATGGAGAGGGGATGGGGAGGGGGATGGAGGGGGATGGAGAGGGGATGGAGAGGAGATGGAGAGGGGGATGGAGAGGGGGATGGAGAGGGGGATA TR:VR 27:4 15:0 chr17 40003783 d_585 G . PASS END=40004172;SVTYPE=DEL;SVLEN=-389 TR:VR 22:7 4:0 chr2 127702312 d_779 T . Too_small_size END=127702349;SVTYPE=DEL;SVLEN=-37 TR:VR 43:18 13:0 chr20 15919904 r_149 A . PASS END=16010409;SVTYPE=DEL;SVLEN=-90505 TR:VR 57:6 16:0 chr20 32562893 i_632 G . PASS END=32562893;SVTYPE=INS;SVINSLEN=819;SVINSSEQ=ATGGAGGGGGAGAGAGAGAGGGAGGCAGAGAGTGTGAGGGGAGGCAGGGAGGGACAGTGGAGGGGAAGGAGGGTAGAGGTGAGGGAGAGTGCGAGAGGGAGGGAGAGTGAGAGGGGGAAGGAGGCAGTGAGAGAGGGAGAGGAGGGAAGAGAGACGGAGGGAAGGAAAGAGACAGAAGGAGAAAGATGGAGGGAAGGGAGGCAGAGATGGAGGCAGGAGCTGGAGGGAGGGAGAGGGAGGGAGGGAGGGAGGGAGGGAGAGTGGGGAGGAAGGAAAGGGAGGGAGGGGAGGAGGGAGTGGAAGGCAGGGAGGGTGGAGGGGAGGGAGGGAAAGGGAGGGATGGAGGACAGGGAGGGTGGGGAGGGAGGGAGGAGGGAGAGGAGGGCAGGGAGGGTGGGGGGGGGAGGGTGGGGGAGGGAGGGTGGAGGGCAGGGGAGGATGGAGGGAGGGAGAGTGGGGAAGGTGGGAGGGGAGGGAGGGAGGGAGGTGCAGGGGGAGGGAGGGAGAGTGGGGAGGGTGGAGGGGAGGGAGGGTGGAGGGAGGGAGAGAGTGGGGAGGGTGGAGGGCAGGGAGGAGGGAGGAGGGGAGGGAGGGAGAGTGGGGAGGGAGGCAGGGAGGGTGGAGCGGGCAGGGAGGATGGAGGGAGGGAGAGTGGGGAGGGGTGGAGGGCAGGGAGGGGTGGAGGGGCAGGGAGGATGGAGGGAGGGAGAGTGGGGAGGGTGGAGGGGGGCAGGGAGTGGGGAGGGAGGGACAGTGGGGAGGTTGGAGGGGAGGGAGGGTGGAGGGCAGGGAGGGTGGAGAGCAGGGAGGGTGGGGGAG TR:VR 48:4 7:0 chr22 39400800 r_171_0 C C]chr9:20551161] . PASS SVTYPE=BND;MATEID=r_171_1 TR:VR 51:12 14:0 chr9 20551161 r_171_1 T T]chr22:39400800] . PASS SVTYPE=BND;MATEID=r_171_0 TR:VR 51:12 14:0 chr7 49652987 d_1158 A . PASS END=49653090;SVTYPE=DEL;SVLEN=-103 TR:VR 49:8 15:0 chrX 323450 r_264 G . PASS END=324043;SVTYPE=DUP;SVLEN=593;SVINSLEN=14;SVINSSEQ=GTGTGTGTGTGTGT TR:VR 43:8 7:0 chr1 47070082 r_8 C . PASS END=47156662;SVTYPE=DEL;SVLEN=-86580 TR:VR 29:14 27:0 chr2 90381618 i_549 A . Too_low_VAF END=90381618;SVTYPE=INS;SVINSLEN=75;SVINSSEQ=GGTAATCATCATCGAATGGAATCGAATGTAATCATTGAATGAAATGGAATGGAATCACCATCGAATGGAATGTTA TR:VR 268:4 87:1 chr22 39400823 r_172_0 C [chr9:16230205[A . PASS SVTYPE=BND;MATEID=r_172_1 TR:VR 61:17 22:0 chr9 16230205 r_172_1 A [chr22:39400823[A . PASS SVTYPE=BND;MATEID=r_172_0 TR:VR 61:17 22:0 chr11 25101793 r_30_0 T [chr2:193213246[C . PASS SVTYPE=BND;MATEID=r_30_1 TR:VR 55:3 23:0 chr2 193213246 r_30_1 C [chr11:25101793[C . PASS SVTYPE=BND;MATEID=r_30_0 TR:VR 55:3 23:0 chr2 90382819 d_731 G . Too_low_VAF;Too_small_size END=90382847;SVTYPE=DEL;SVLEN=-28 TR:VR 288:3 89:0 chrX 32460907 r_265 T . PASS END=32621442;SVTYPE=DEL;SVLEN=-160535 TR:VR 50:18 19:0 chr1 5533747 r_1_0 T ]chr14:77092765]CGAT . PASS SVTYPE=BND;MATEID=r_1_1;SVINSLEN=3;SVINSSEQ=CGA TR:VR 46:3 32:0 chr14 77092765 r_1_1 T TTCG[chr1:5533747[ . PASS SVTYPE=BND;MATEID=r_1_0;SVINSLEN=3;SVINSSEQ=TCG TR:VR 46:3 32:0 chr14_GL000225v1_random 111181 d_376 C . Too_low_VAF END=111464;SVTYPE=DEL;SVLEN=-283;SVINSLEN=10;SVINSSEQ=CTGGTTAACA TR:VR 380:6 150:1 chr17 45558131 i_362 A . PASS END=45558131;SVTYPE=INS;SVINSLEN=67;SVINSSEQ=AATTTATTAATTAATAAATCAATGTATTAAATAAATTTATTAATTAATAAATCAATGTATTAAATCA TR:VR 29:5 7:0 chr19 54297003 r_120_0 T T]chr19:54577177] . Too_low_VAF SVTYPE=BND;MATEID=r_120_1 TR:VR 61:3 22:0 chr19 54577177 r_120_1 C C]chr19:54297003] . Too_low_VAF SVTYPE=BND;MATEID=r_120_0 TR:VR 61:3 22:0 chr20 4059309 d_802 A . PASS END=4059468;SVTYPE=DEL;SVLEN=-159 TR:VR 42:9 12:0 chr21 41474610 i_697 G . PASS END=41474611;SVTYPE=INS;SVINSLEN=699;SVINSSEQ=TAAGGGGATGATTGAGGGGGTGAGGGGGTGAGTGAGGGGGTGAGGGGGTGAGGGGTGAGGAGGGGGCGAGGGGGAGAGTGAGGGGGCGAGGGGGTGAGTGAGGAGGTGAGCGGGTGAGTGAGGAGGTGAGTGGGGGTGGAGGAGGAGGTGAGGGGGTGAGTAAGGGGTTGAGGTGAGGGGGTGAGTGAGGAGGTGAGGGGGTGAGTGAGGGGGTGAGGGGGTGAGTGAGGGGGTGAGGGAGTGAGTGAGGGGGTGGGGTGAGGGGTGGTGAGCAGGTGTGAGTGAGGGGGTGAAGGGGTGAGTAAGGAGGTGAGGGGGTGAGTGAGGGGTGGGTGAGGGGGTGGGTGAGGGGATGAGGGAGTGATTCAGAGGGTGAAGGGTGAGGGAGGGAGTGAAGGCATGATTGAGGGGGTGACGGGGGGGTGAGTGAGGGGTGACTGAGGGTGAAGGGGGGAGGGAGTGAGGAGGGTTGAGGGGGTGAAGGCATGAGTGAGGGGGCGAATGGGGTGAGAGACGGGGTGAGTGAGGGGTGAAGGGATGAATGAGGGGGTGCGTAAGGGGGTTGAGGGGTGAGGGGGTGAGTGAGGAGGTGAAGGGGGTGAGTGAGGGCGTGAGGGGGGTGAGGGAGTGAGGGATTAGTGAGGGGGTGAGGGGTTGAGTGAGGAGGTGAGCAGGTGGGTGAGGATGAAGGGGTGAGTG TR:VR 47:4 11:0 chr1 5746603 r_2_0 A A]chr15:48478013] . PASS SVTYPE=BND;MATEID=r_2_1 TR:VR 36:8 27:0 chr15 48478013 r_2_1 A A]chr1:5746603] . PASS SVTYPE=BND;MATEID=r_2_0 TR:VR 36:8 27:0 chr17 45583235 r_102_0 A [chr9:107775291[G . Too_low_VAF SVTYPE=BND;MATEID=r_102_1 TR:VR 69:3 36:0 chr9 107775291 r_102_1 G [chr17:45583235[G . Too_low_VAF SVTYPE=BND;MATEID=r_102_0 TR:VR 69:3 36:0 chr20 43427753 i_633 A . Too_small_size END=43427753;SVTYPE=INS;SVINSLEN=46;SVINSSEQ=GAGAGAGAGAGAGAGAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA TR:VR 54:8 11:0 chr6 32526034 r_226_0 T T]chr8:46312318] . Too_low_VAF SVTYPE=BND;MATEID=r_226_1 TR:VR 92:3 35:1 chr8 46312318 r_226_1 A A]chr6:32526034] . Too_low_VAF SVTYPE=BND;MATEID=r_226_0 TR:VR 92:3 35:1 chr9 129442928 r_257_0 G G[chrX:72733183[ . PASS SVTYPE=BND;MATEID=r_257_1 TR:VR 93:6 35:1 chrX 72733183 r_257_1 T ]chr9:129442928]T . PASS SVTYPE=BND;MATEID=r_257_0 TR:VR 93:6 35:1 chr1 5746604 r_3_0 T [chr15:48478067[G . PASS SVTYPE=BND;MATEID=r_3_1 TR:VR 36:13 27:0 chr15 48478067 r_3_1 G [chr1:5746604[G . PASS SVTYPE=BND;MATEID=r_3_0 TR:VR 36:13 27:0 chr12 7916575 r_54_0 T T]chr12:111644503] . PASS SVTYPE=BND;MATEID=r_54_1 TR:VR 69:10 12:0 chr12 111644503 r_54_1 T T]chr12:7916575] . PASS SVTYPE=BND;MATEID=r_54_0 TR:VR 69:10 12:0 chr16 32496150 r_95_0 T T[chr7:54485302[ . PASS SVTYPE=BND;MATEID=r_95_1 TR:VR 74:13 18:0 chr7 54485302 r_95_1 C ]chr16:32496150]C . PASS SVTYPE=BND;MATEID=r_95_0 TR:VR 74:13 18:0 chr17 45583245 r_103_0 C C]chr9:107778303] . PASS SVTYPE=BND;MATEID=r_103_1 TR:VR 69:4 36:0 chr9 107778303 r_103_1 A A]chr17:45583245] . PASS SVTYPE=BND;MATEID=r_103_0 TR:VR 69:4 36:0 chr9 133563928 d_1257 A . Too_small_size END=133563908;SVTYPE=INS;SVINSLEN=0;SVINSSEQ= TR:VR 54:3 16:0 chr12 7916669 r_55_0 G [chr12:111644527[G . PASS SVTYPE=BND;MATEID=r_55_1 TR:VR 69:6 12:0 chr12 111644527 r_55_1 G [chr12:7916669[G . PASS SVTYPE=BND;MATEID=r_55_0 TR:VR 69:6 12:0 chr14_GL000225v1_random 46730 i_246 G . Too_low_VAF END=46730;SVTYPE=INS;SVINSLEN=2096;SVINSSEQ=CACTTATGTCACAAGGATCCTGCTGCTAGGCAGATCCTAGACAAGAGTTACATCACCTGAAATGATCAGTGCAGCTAGAGTATGTCACAATGCCGCCTGTAGGCAGAACCCCTCAGAAAAGAAGATACAGGACCTAGGTGATCAGTGCAGAGATGACGGTTGCAATGTCCCTGTAGGCAGATGGCCTTCTCTTTCGCGTACATCACCTGGCTGATCATTGCAGGGATATGTCACCAAGCCCCCTGTACTGCGATCCTAGAAAAGAGTTCCATCTCGTGGGTAATCAGTGAGAGAGACATGTCACAATGCCATTCTTTAGGCAGAGCCAGGACAAGAGCTGGCCCATGTACCTAGGTGATCAGTGCAGAGATACATCGCAATGCCCCTGTAGGCAGAGCCTTGACAAGGGGTAGCATCACCTGGGTGATCTTTGCAGGGATATGTCCAATGCACCCTGTGAGGCAGATCCCCAAGAAGAGTTATATCACCTGGGTGATCAGTGCTTCCCCTATGTCACAGAGAACCCCAGGCAGAGCACGGGGCAAGAGCAGCATCCACCTGTGATCAGTGCAGTGATATGTCACAATGCCCTGTAGCCAGTGCCTAGTGCCCTCCTAAAGCTTCCCACTGCCACCTGGGAGATCTGTGCAGAGATATGTCACAATAGCTCCTCAGTAGGCAGAGACCAGGTAAGAGTTGCGCATCACCCCGGCTGATCAGTGCAGAGATATGTCTCAATCCTCTGTGGCACAGCCATTGAGAAGAGTTACATCACCTGAGGCTCAGTGCAGAGATATGTCCAATGCTCTGTAGGCATAGCCTACACAATAGTTACATCACCTGGATGATCAGTTCAGAGATATGTCACAATGCCCCCACCCTGCAGAGCCTAGACAAGAGTTGCATCACCTGGGTGATCAGTGTAGAGATATGTCACAATGTCCCCTGTAGGCAGAGCCTAGAGAAGAGTTACATCACCTGGGTGATCAGTGCAGAGATATGTCAGAAATCCCAAGTAGGCTGAGCCTAGACAAGAGTTCCATCACCTTAGGTGATCAGTTCAGAGATATGTGAAAATTCTGCTGTAGGCAGAGCCTAGACAAGAGTTGCATCACCTAGTGATCAGTGCAGAGATATGTCACAATTCCCCTGTAGGCAGAGTGTAGACAAGAGTTACATCACCTAGTGTGATCAGTGCAGAGATATGTCACAAACGCCCCTGTAGGCAGAACCATGACAACTAGTTACATCACCTAGTGAGATCAGTGCAAATATATCACAATGCCCCCTGTGGGCAGAGGGTAGACAAGAGTTACATCACCTAGGTGTTCAGTGCAGAGATTTTGTCACAATTCCCTGTAGGCAGAGCTTATAAAAGGGTTACATCACCTGGGTGATCAGTGCAGAGATATGTCACAAAGGCTCCTGTAGGCAGATCCTAGAGATGAGTTACATCACCTGGGTGATCAGTGCAGAGATATGTCACAAAGCCCCCTGTAGGCAGAGCCTTGAGAAGTGTTACATCACCTCGGTGATCAGTGAAGGTATAAGTCAAGTAAAGCCTCCTGTAGGCAGAGCTTAGACAAGAGTTACATCACCTGGGTGATCAGTGCAGAGATATGTCACAAGCCCCTGTAGGCAGAGCCTAGACAAGAGTTTCATCACTTGGATGATCAGTGCAGTGATATGTCACAATGCCATGTAGCCAGAGCCTAGAACAAAGTTACTGCACCTGGGAGATCAGTGCAGAGATATGTCACAATAGTCCCCAGTAGGCAGAGACCAGACAAGAGTTGGATCACCTCGGGATCACTGCAGAGATATGTCTCAATCACCCTGTGGGCACAGCCTAGACAAGAGTTACATCACCTCGGTTAACAGTGCAGTAAGATATGTCAAAAAATCCCTGTAGGCAGAGCCTACACAAGAGTTACATCACTTGGGTGATCAGTGCAGAGATATGTCACAATACCCCTTGTAAGCAGAACCCAGACAAGAGTTACATCACCTGGGTGATCAGTGCAGAGATATATCACAAATGACCTGGAGGCAGAGCATAGAGAAGAGCTACATCACCTGGGTGATCAGTGCAGTGA TR:VR 655:8 246:1 chr16 32686558 r_96_0 G G[chr7:53021425[ . Too_low_VAF SVTYPE=BND;MATEID=r_96_1 TR:VR 96:3 29:0 chr7 53021425 r_96_1 A ]chr16:32686558]A . Too_low_VAF SVTYPE=BND;MATEID=r_96_0 TR:VR 96:3 29:0 chr19 20050966 r_111 G . PASS END=20086947;SVTYPE=DEL;SVLEN=-35981 TR:VR 55:17 16:0 chr11 3096873 i_125 G . PASS END=3096908;SVTYPE=INS;SVINSLEN=269;SVINSSEQ=GAAAGAGGGGGAAGATGGGAGGAGGAGAGGAAAAAGGGGGAAGATGGGAGGGGGAGGAGAGGAGAGAGGGGGAAGAGAGGAAGAGGAGAGGAAAGAGAGGAAGACGGGAGGAGGAGGAGAGGAAGGGGAAGACGGGAGGAGGAGAGGAAGAGGGGGGAAGACGGGAGGAGGAGAGGAAAGAGGGGGAAGATGGGGGAGGAGAGGAAGAGGGGGAAGACGGGAGGAGGAGGAGAGAGGAAAGAGGGGGGAAGATGGGAGGAGGAGGAGGA TR:VR 23:3 14:0 chr12 8189053 d_181 C . PASS END=8190984;SVTYPE=DEL;SVLEN=-1931 TR:VR 27:7 17:0 chr17_KI270730v1_random 92200 d_609 G . Too_low_VAF END=92315;SVTYPE=DEL;SVLEN=-115 TR:VR 158:5 52:1 chr19 55851190 d_664 C . PASS END=55851158;SVTYPE=INS;SVINSLEN=130;SVINSSEQ=GAGGCTGCGGTGTAATTTACGAGGCTGCGGTGTAATTTACGAGGCTGCGGTGTAATGTCCGTGGCTGCGGTGTAATGTCCGAGGCTGCGGTGTAATTTACGAGGCTGCGGTGTAATTTACGAGAGGCTGC TR:VR 33:9 10:0 chr3 195760672 i_797 A . PASS END=195760714;SVTYPE=INS;SVINSLEN=340;SVINSSEQ=TGGATGGAGGGGCTGGGAAGGCGTCCAGCGCTAGGATGGAGTGGAGGGGCTGGGAAGGCGTCCAGCGCTGAGGATGGAGTGGAGGGGGCTGGGAAGGGGTCCAGCACTAGGATGGGAGGGAGGGGCTGGGAAGGCGTCCAGCACTAGGATGGAGTGGAGGGGCTGGGAAGGCGTCCAGCACTAGGATGGAGTGGAGGGGCTGGGAAGGCGTCCAGCAGCTGGATGGAGTGGAGGGGGCTGGGAAGGCGTCCAGCGCTAGGATGGATGGAGGGGCTGGGAAGGCGTCCAGCGCTAGGGATGGAGCTGGAGGGGGCTGGGAAGGGGTCCAGCGCTAGGATGG TR:VR 19:3 5:0 chr17_KI270730v1_random 92468 d_610 A . Too_low_VAF END=92490;SVTYPE=INS;SVINSLEN=132;SVINSSEQ=AAGGGGTGGAGTGGAGTGGAGTGGAATGGAGTGGAATAGAATGGGATGGAATTGAACGGAGTGCAGTGGAAAGGTGTAGAATGGAATGGAATGGAGAGGAGTGGAGTGGAGTGGAGTTGAGTGGAGTGGATT TR:VR 157:4 52:0 chr2 33692771 r_127_0 C C]chr5:173840966] . PASS SVTYPE=BND;MATEID=r_127_1 TR:VR 79:13 21:0 chr5 173840966 r_127_1 T T]chr2:33692771] . PASS SVTYPE=BND;MATEID=r_127_0 TR:VR 79:13 21:0 chr21 9756449 r_151_0 G G]chrUn_KI270750v1:33932] . PASS SVTYPE=BND;MATEID=r_151_1 TR:VR 151:20 55:0 chrUn_KI270750v1 33932 r_151_1 G G]chr21:9756449] . PASS SVTYPE=BND;MATEID=r_151_0 TR:VR 151:20 55:0 chr7 56368066 d_1161 A . PASS END=56368921;SVTYPE=DEL;SVLEN=-855 TR:VR 115:7 27:0 chr16 90121656 r_98_0 G ]chr2:242183529]G . Too_low_VAF SVTYPE=BND;MATEID=r_98_1 TR:VR 119:3 85:0 chr2 242183529 r_98_1 G G[chr16:90121656[ . Too_low_VAF SVTYPE=BND;MATEID=r_98_0 TR:VR 119:3 85:0 chr2 33692774 r_128_0 G [chr5:173840977[AA . PASS SVTYPE=BND;MATEID=r_128_1;SVINSLEN=1;SVINSSEQ=A TR:VR 79:5 21:0 chr5 173840977 r_128_1 A [chr2:33692774[TA . PASS SVTYPE=BND;MATEID=r_128_0;SVINSLEN=1;SVINSSEQ=T TR:VR 79:5 21:0 chr21 9760432 r_152_0 C [chrUn_KI270442v1:101900[A . PASS SVTYPE=BND;MATEID=r_152_1 TR:VR 175:11 62:0 chrUn_KI270442v1 101900 r_152_1 A [chr21:9760432[A . PASS SVTYPE=BND;MATEID=r_152_0 TR:VR 175:11 62:0 chr7 57418184 r_242 T . PASS END=57768270;SVTYPE=DEL;SVLEN=-350086 TR:VR 73:30 27:0 chr8 143321988 i_1120 A . PASS END=143321988;SVTYPE=INS;SVINSLEN=582;SVINSSEQ=TACGCCCGCCACACACGCACGCCACACAGGCACGCCACACAAGCACGCCACACACACACGCACGCCACAAACGCACGCCACACACGCACGCCACACGCACGCCAGCCACACACGCACGCACACACGCACGCCAGCCACACACGCACGCCACACGCACGCCACACACGAACGCCACACAAACGCCACACACACGAATGCCACGCCACACACGCACGCCACACACGCACGCCACACACGCACGCCACACACAGGCATGCCACACACATGCACGCCACACACAGGCACGCCACACACGCACGCCACACACAGGCATGCCAAACACGCACGCCACACATGCACGCCACACACACAGGCACACCACACACAGGCACGCCACACACACAGGCACGCCACACACATGCACGCCACACACACAGGCACGCCACACACATGCACGCCACACGCACGCCACACGCACGCCACACACGCATGCCACATGCACACCCACACGCATGCCACACACAGGCACGCCACACACACAGGTACGCCACACACATGCACGCCACACACGCACGCCACACGCACGCCACACACATGCTCACC TR:VR 34:10 5:0 chr9 134012011 d_1258 G . Too_small_size END=134011977;SVTYPE=INS;SVINSLEN=14;SVINSSEQ=ACTGCGATACACCG TR:VR 42:3 10:0 chr2 90390981 d_737 C . Too_low_VAF;Too_small_size END=90391022;SVTYPE=DEL;SVLEN=-41 TR:VR 427:6 152:0 chr22 10691589 r_153_0 A ]chrUn_KI270746v1:14193]C . PASS SVTYPE=BND;MATEID=r_153_1 TR:VR 64:4 31:0 chrUn_KI270746v1 14193 r_153_1 C C[chr22:10691589[ . PASS SVTYPE=BND;MATEID=r_153_0 TR:VR 64:4 31:0 chr10 42167869 r_23_0 A ATTGAATGCAATCATCATCGAATGGAATAGAACGGAATCATTGAATGGACTCGAATGGAATCATCATCAAATGGAATCGAGTGGAATCATCGAATGGACTCGA]chr14_KI270725v1_random:99254] . Too_low_VAF SVTYPE=BND;MATEID=r_23_1;SVINSLEN=102;SVINSSEQ=TTGAATGCAATCATCATCGAATGGAATAGAACGGAATCATTGAATGGACTCGAATGGAATCATCATCAAATGGAATCGAGTGGAATCATCGAATGGACTCGA TR:VR 91:3 30:0 chr14_KI270725v1_random 99254 r_23_1 C CTCGAGTCCATTCGATGATTCCACTCGATTCCATTTGATGATGATTCCATTCGAGTCCATTCAATGATTCCGTTCTATTCCATTCGATGATGATTGCATTCAA]chr10:42167869] . Too_low_VAF SVTYPE=BND;MATEID=r_23_0;SVINSLEN=102;SVINSSEQ=TCGAGTCCATTCGATGATTCCACTCGATTCCATTTGATGATGATTCCATTCGAGTCCATTCAATGATTCCGTTCTATTCCATTCGATGATGATTGCATTCAA TR:VR 91:3 30:0 chr19 21576092 r_112 A . Too_low_VAF END=22630314;SVTYPE=DEL;SVLEN=-1054222;SVINSLEN=10;SVINSSEQ=GAATGCAGAA TR:VR 104:5 35:1 chr22 10716870 r_154 A . Too_low_VAF END=10716969;SVTYPE=DUP;SVLEN=99;SVINSLEN=106;SVINSSEQ=TTCCATTCCATTCTTTTCCATTCCATTCCATTCCATTTGAACCCAATGAATTCCACTGCATTCAATTGAAGTCCATTCCATTCCATTCGGGTCCATTCCCTTCAAT TR:VR 124:3 58:1 chrUn_GL000216v2 164875 d_1287 A . Too_low_VAF END=164950;SVTYPE=INS;SVINSLEN=143;SVINSSEQ=CTCTTCCTTACTGTCTGCCTGCAGGGGCATTGTGAAATATATCTGCAATGTTCTCCAAGGTGCTGTAACTTTAGTCTAGGCTCTGGCTACACGACATCGTGACATATAACTGCACTGATCACCCAGGAGATATAACTCTTGAC TR:VR 135:4 32:0 chrX 41441019 i_1257 A . PASS END=41441020;SVTYPE=INS;SVINSLEN=167;SVINSSEQ=ATCTATATATATTCTATATGTATTCTATATATAATCTATATATATTCTATATATATTCTATATATAGATCTATATATATATTCTATATATATATTCTATATATATATTCTATATATATATTCTATATATATTATATATATTCTATATATAGATTCTATATATATATA TR:VR 34:5 15:0 chrY 11328408 i_1297 T . Too_low_VAF END=11328408;SVTYPE=INS;SVINSLEN=342;SVINSSEQ=CACCTTTGTTGATCAGTTCAGAGATGTGTCATGCTGACTGTTTGCTCCCGGATCTCAAGTGGGCAGCCAGAAACATGCAGTGAAGGGTGGAAGACCAGAATGGTGCCTCTGCTCTCCTTGGCAGTTTCCATCACCGGCCACACTGCAGACTCCCCCGCTGTTGCCACAAACGGGAATCCATCGTCAGACCATCACGCTGGGGAGGCATCTTCTCTGATGGGGTCTCGTCACCCTGCCCTCCTACAAGGAAATGAACCAGAGCCACACGCCTACAGGTGTGTGCATTGAGACTGTCCATGCAACGGCGACACCCACAGGCACTGCCTCAGCAATACGAGAGAT TR:VR 441:6 153:1 chr12 99021693 r_58 G . PASS END=99153011;SVTYPE=DEL;SVLEN=-131318 TR:VR 42:9 19:0 chr6 32586766 i_925 C . Too_small_size END=32586766;SVTYPE=INS;SVINSLEN=44;SVINSSEQ=TTTTATTCCAATAAATATTTCCAAAATATTTATTTTTTATTTCC TR:VR 27:4 5:0 chrUn_KI270442v1 208305 i_1194 A . Too_low_VAF END=208306;SVTYPE=INS;SVINSLEN=515;SVINSSEQ=TATTTCCTATTTCACCTTCAGTCATATAGGGCTCAAAAATATTTTTTTGCAGATTCCACAAAAAGACTGTTTCCAAACTGCTCAATCCAAAGAAAGTTTTAACTCTGTAAGATGAATGGACACATCACAAAAAAGTTTATCAGAATGCTTCTGTCTAGTTTTTATGTGAAGACATTTCTTTTCCACCCTAGGCTTCAATGGGCTCAGAAATATCCCTTTGCAGAGTCTACAAAAGGACTGTTTCCAAGCTGCTCAATCAAACAAAGGTTCAACATTATGAGATGAATGCACACACTGCAGAGATGTTTCTCACAATGCTTCTGTCTATTTTTTATGTGAAGGTATTTCCTTTTTCACCATGGGCTTCAAAGCACTCCAAACATCCATTTGCTGATTCCACAAAAAGACTGTTTCCAAGCTGCTCAATCAAAAGAAAGGTTCAACTCTATGAGATGAGTGCACACATCACAGAGATGTTTCTCACAATGCTTCCATCTATTTTTTATGTGAAGGTA TR:VR 112:3 48:1 chr1 21447855 r_4_0 C C]chr1:145413819] . PASS SVTYPE=BND;MATEID=r_4_1 TR:VR 41:5 16:0 chr1 145413819 r_4_1 T T]chr1:21447855] . PASS SVTYPE=BND;MATEID=r_4_0 TR:VR 41:5 16:0 chr14_GL000225v1_random 49805 d_300 A . Too_low_VAF END=50091;SVTYPE=DEL;SVLEN=-286;SVINSLEN=14;SVINSSEQ=GAGAATAGAGAGGA TR:VR 667:7 247:1 chr19 21720256 r_113_0 C [chr2:174087492[CTCCCTCTCCCTC . PASS SVTYPE=BND;MATEID=r_113_1;SVINSLEN=12;SVINSSEQ=CTCCCTCTCCCT TR:VR 79:5 34:1 chr2 174087492 r_113_1 C [chr19:21720256[AGGGAGAGGGAGC . PASS SVTYPE=BND;MATEID=r_113_0;SVINSLEN=12;SVINSSEQ=AGGGAGAGGGAG TR:VR 79:5 34:1 chr3 99842453 r_192_0 A A]chr3:99937206] . PASS SVTYPE=BND;MATEID=r_192_1 TR:VR 62:11 28:0 chr3 99937206 r_192_1 G G]chr3:99842453] . PASS SVTYPE=BND;MATEID=r_192_0 TR:VR 62:11 28:0 chr6 32587099 i_926 T . PASS END=32587099;SVTYPE=INS;SVINSLEN=58;SVINSSEQ=AAATTGACTCTCCTTGTAACCATACAGTAGCTTCTCGTATCTATTTAAATAAAATTCA TR:VR 43:4 11:0 chr17_KI270730v1_random 96186 i_397 G . Too_low_VAF END=96186;SVTYPE=INS;SVINSLEN=116;SVINSSEQ=AGTGGAGTAGAGTGGAGTGGAATTGAGTGGTATGGATTGTTATGTAATGCAATGGAATGGAGTGGAGTGGAGTAGAGTGTAGTGGAATTGAGTGGTATGGATTGTTATGGAATGCA TR:VR 171:7 52:1 chr2 137482259 d_782 A . PASS END=137482781;SVTYPE=DEL;SVLEN=-522 TR:VR 32:3 10:0 chr20 26612788 i_608 A . PASS END=26612788;SVTYPE=INS;SVINSLEN=342;SVINSSEQ=TTCCCTTTCACAGAGCAGGTTTGAAACACTCCTTTTGTAGTGTCTCTAAGTGAATATTTGGCGTGCTTTCAGGCCTAACGTGAAAAAGGAAATATCTTCCCATAAAAACTAGACAGAAGAATTATCAAAAACGTGTTTGTGATGTGTGCCCTCTACTGACAGAGTTGAACCTTTCTTTGCAAGAGCAGTTTTGAAACCCTCTTTTTGTAGAATCTGCAAGAGGATATTTGCATAGCTTTGAGGATTTCTTGGGAAACGGGAATGTCTTCAGATAAACTCTAGACAGAAGCATTCTCAGAAACTTCTTTGGGATGTTTCAATTGAAGTCACAGTGTTGAACCT TR:VR 16:8 4:0 chr22 10721485 d_898 T . Too_low_VAF END=10721816;SVTYPE=DEL;SVLEN=-331;SVINSLEN=1;SVINSSEQ=G TR:VR 146:3 54:0 chr6 32588911 i_927 C . PASS END=32588934;SVTYPE=INS;SVINSLEN=319;SVINSSEQ=TAGTGACTTAAGTTTTTTTTTTTTTTTTTTTTTTTTTTGAGAGGGAGTCTCACCCTCTCGCCCAGGCTGGAGTGCAGTGGCATGATCTTGGCTCACTGCAACTTCTGCCTCCTGGGTTTAAGCGATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGTGTGCGCCACTACCCCGGCTAATTTTTGTATTTTTAGTAGAGATGACGTTTCACCATATTGGTCAGACGGATCTCAAACTCCTGACCTTGTGATCCGCCCACCTCCATGTCTCAAAGTGCTGGGATTACAGGCGTGAACCACCATGCCTGGCCAG TR:VR 46:4 13:0 chrX 1366752 d_1369 G . PASS END=1366729;SVTYPE=INS;SVINSLEN=292;SVINSSEQ=AGCGGGGTGAGCCGGGTGCCCCGGGTGAGCGGGGTGCGCGGGGTGAGCCCGTGAGCCGGGTGCGCGGGGTGAGCCGGTGCGCGGGGTGAGCGGAGGGTGAGCGGGGGTGCGCGGGGTGAGCCGGTGCGCGGGGTGAGCCGGGTGCGCGGGGTGAGCGGGGTGAGCGGGGTGCGCGGTGCGCGGTGAGCGTGGGTGCGCGGGGTGAGCCGGGTGCGCGGGGTGAGCGGGGTGCGGAGCCGGGTGCCCCGGGTGAGCGGGGTGCGCGGGGTGAGCCGGGTGCGCGGGATGAGCG TR:VR 39:4 12:0 chr2 141175402 r_139 C . PASS END=141277301;SVTYPE=DEL;SVLEN=-101899 TR:VR 54:3 24:0 chr20 26615784 i_609 T . PASS END=26615784;SVTYPE=INS;SVINSLEN=680;SVINSSEQ=CTAGACAGAAGCATTCTCAGAAACTGCTTTGGGATGTTTGCATTCAAGTCACAGAGTTGAACATTCCCTTTTATAGAGCAGGTTTGAAACACTCTTTTTGTAGTATCTGGATGAGGACATTTGGAGCGCTTTCAGGCGTATGGTGAAAAAGGAAATATATTCCCGTAAAAACTAGACAGAAGCATTCTCAGAAACTTATTTCTGATGTGTGCCATCAACAAACAGAGTTGAACCTTTCTTTTGATAGAGCAGTTTTGAAACACTCTTTTTGTAAAATCTGCAAGAGGATATTTGGATAGCTTTGAGGATTTCGTTGCAAACCGGAATGGCTTCATATAAACTCTAGACAGAAGCATTCTCAGAAACTTATTTGTGATGTATGTACTCAACTAACAGAACTAAACCATCGTTTTGAAGGAGCAGTTTTGAAACACTCTTTTTGCGGAATCTGCAAGTGGATATTTGCTAGCTTGGAGGATTTCGTTGGAAACGGGATTACATATAAAAAGCAGACAGCAGCATTCTCATGAACTTCTTTGTGATGTTTGCATTCAAGTCACAGAGTTGAACATTCCCTTTCATAGAGCCGGTTTGAAACACTCTTTTTGTAGTATCTGGATTTGGACATTTGGATCGCTTTCAGGCCTATGGTGAAAAAGGAAATATCTTCCCATGAAAAC TR:VR 16:5 4:0 chrX 49018716 d_1386 T . PASS END=49018777;SVTYPE=DEL;SVLEN=-61 TR:VR 32:3 5:0 chr2 90393380 d_742 A . Too_low_VAF END=90393428;SVTYPE=DEL;SVLEN=-48 TR:VR 427:3 155:1 chr4 11800302 r_197 T . PASS END=11928718;SVTYPE=DEL;SVLEN=-128416 TR:VR 35:18 26:0 chr6 32752919 i_928 A . PASS END=32752920;SVTYPE=INS;SVINSLEN=325;SVINSSEQ=AACAAAACAAAATATATATATAGTTTTATTTTGCAGTCTCGCTCTGTCACCCAGGCTGGAGTGAAATGGTGTGGTCTCGGTTCACTGCAACCTCCGCCTCCTGGGTTCGAGCAATTCTCCCACCTCAGCCTCCCAAATAGCTGGGACTACAGGAGAATGCCACCATGCCCGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACTATGTTGGCCAGGTTTGTCTTGAACTCCTGACCTAGTGATCCGCCCACCTCGGCCTTCCAAAGTACTGGGATTACAGGTATGAGCCACGGCGCCCCACCCAAATAAATGTTTTTTTA TR:VR 34:3 17:0 chr9 135189318 i_1151 C . PASS END=135189318;SVTYPE=INS;SVINSLEN=237;SVINSSEQ=CCCATGCCACACCCCCCACCATGCCACACCTCACCCCCATGCCACACCCTCCACCATGCCACACCTCACCCCCATGCCACACCCCCCCCCACCATGCCACACCCCATGCCACACCCCCCACCATGCCACACCACACCCCATGCCACACCCCCCCCCCACCACGCCACACCCCATGCCACACCCCCCCCCCCACCATGCCACACCCCATGCCACACCCCCCACCATGCCACACCACAC TR:VR 29:9 10:0 chr19 2419169 i_457 T . PASS END=2419169;SVTYPE=INS;SVINSLEN=260;SVINSSEQ=CCCTCCATCCCTTTCCTTCCCTTCCCTTCCCTCCCTCCCTTTCCTTTCCTTCTCTCCTTCCCTTTCCTCCCTCCACACTTCCTTCCCTCCCTCTTTCCTTCCCTGCCTTCCCTCCCTACCTGCCCCCTGCCTTCCCTCCCTACCTCGCCCTTCCCTCCCTACCTCCCCTTCCCTCCCTACCCTCTCCTTTCCTTCCCTTCCCTACCTCTCCCTTTCCTTCCCTCCCTACCTCTCATCTTTCCTTCCATTCCCTCGTCTCC TR:VR 47:7 15:0 chr2 50610654 r_130 T . PASS END=50709753;SVTYPE=DEL;SVLEN=-99099 TR:VR 47:8 29:0 chr21 43336512 i_703 A . PASS END=43336512;SVTYPE=INS;SVINSLEN=165;SVINSSEQ=TCACCACCACCATCACCATCACCATCACCGCCGCCACCACCACCACCACCGCCGCCGCCGCCACCGCCGCCGCCACCACCACCACCATCACCATCATCACCGCCGCCACCACCACCACCATCACCATCATCACCGCCGCCACCACACACCACCATCACCATCATC TR:VR 196:14 56:1 chr4 120286800 d_1020 C . PASS END=120286898;SVTYPE=DEL;SVLEN=-98 TR:VR 18:15 13:0 chr6 32753352 i_929 A . PASS END=32753353;SVTYPE=INS;SVINSLEN=300;SVINSSEQ=CAAAGAAGGGCAGGGTGTGGTGGCTCATGCCTATAATCCCACCACTTTGGGAGGCTGAGGCAGGTAGATTGGTTGAGCACAGGAGTTCAAGACCAGCTGGGCAGCATGGTGAAACCCTATCTCTACAAAAAATACAAAAACTAGCCAGGCATGGTCACACATGCCAGTAGTCCCGGCTACTCCAGAGACTGAGGTGGGAGGATGGATTGAGCCCGGGAAGTGAAGGCTGCAGTGAGCTGTGATCGTACCACTGCACCCCAGCCAGACCTAGACCCCGTTTCAGAAAAAAAAAAAGTACAA TR:VR 34:3 16:0 chrUn_GL000216v2 22976 d_1276 C . Too_low_VAF END=23096;SVTYPE=DEL;SVLEN=-120;SVINSLEN=11;SVINSSEQ=ATTTAATGATG TR:VR 193:3 42:0 chr10 128788903 d_138 A . PASS END=128789059;SVTYPE=DEL;SVLEN=-156 TR:VR 27:4 9:0 chr11 41983529 r_32_0 G GGGTT]chr9:16291943] . PASS SVTYPE=BND;MATEID=r_32_1;SVINSLEN=4;SVINSSEQ=GGTT TR:VR 47:8 23:0 chr9 16291943 r_32_1 A AAACC]chr11:41983529] . PASS SVTYPE=BND;MATEID=r_32_0;SVINSLEN=4;SVINSSEQ=AACC TR:VR 47:8 23:0 chr18 10631 r_109_0 T T]chr21:46699980] . Too_low_VAF SVTYPE=BND;MATEID=r_109_1 TR:VR 126:4 74:1 chr21 46699980 r_109_1 A A]chr18:10631] . Too_low_VAF SVTYPE=BND;MATEID=r_109_0 TR:VR 126:4 74:1 chr19 253227 i_427 T . PASS END=253227;SVTYPE=INS;SVINSLEN=187;SVINSSEQ=CTTGTTTGACCAGCTATGTGTGTCTCTAATCCAGTCAGTAGATGTCTACAATTAACCGTCAAGAATATTTATGCCTGATTCATGGCTGAAATCGTGTTTGACCAGCTATGTGTGTCTCTCAATCGGATCAAGTAGATGTCTGAAATTAACCATCAGAATATTTTATGCCTGATTCAAGGCTGAAAAT TR:VR 44:4 14:0 chr19 6429324 i_465 G . PASS END=6429326;SVTYPE=INS;SVINSLEN=291;SVINSSEQ=GGGGAGGAGGAGGGAGAAAGGAGAGAAGGAGGGAGGGAGAGAAGAGGAGGAGGGAGAGAAGAGGGAGGAGGAGAGAAAGGGGAGGAGGAGGAGAGGAGGAGGGGGAGGAGGAGGAGAGGAGGAGGGGGAGGGAGGAGAGAAGAGGAGGGGAGGAGGAGGAGAGGAAGAGGGGAGGAGGAGAGGGAGGAGGAGAGGAAGGAGGAGGAGGAGGAGAGGAAGGAGGAGGGGAGGAGGAGGCAGAAAGGAGGAAGGAGGGGGAGGAGGGAGAGGAAAGAGAGTCCGGGAGGAGGA TR:VR 44:5 6:0 chr2 53232918 r_131_0 C ]chr4:46797120]A . Too_low_VAF SVTYPE=BND;MATEID=r_131_1 TR:VR 72:3 21:0 chr4 46797120 r_131_1 A A[chr2:53232918[ . Too_low_VAF SVTYPE=BND;MATEID=r_131_0 TR:VR 72:3 21:0 chr6 32754680 i_930 T . PASS END=32754750;SVTYPE=INS;SVINSLEN=572;SVINSSEQ=ATAATCTATCACCCACCCTGATTATAGGGCTTATGCTTCAACTAGAAAAATCAGATCTCGATGTTCCCCTAAACTTTGAGTCTTGTTCAATCCCTAGCCCTGCCTCTTCCCTTTGCAGGGTCAAAAGCCAGGAGCTACACACAGAGACTGAGGACACGCTGGACAACCCAGCACATGCCTCTCCCCATTTCCCAAAAGTGTTACTCCCTTTTTGATCCCTATGGTGAATGACAGTGCCCACCCTGAGGAAGAGGACAAAATCGGCACAAAACTTTTGACTCCATTCAGCATTCTACTTGGGGAAAATTCAGACCATAACCCTGGGGAGCAGAATCTCAAGTGTTGGTGCCTCTTTGTGCGCCAGTGTCCCTGTCTGAGGACCTGCATGACAGCCTGGAGTACAGGAGATGAACGTCCCAAGGAGACCTAGTTCTCCACTCTGACCTCATCCATAAGAAGGAAGAGCCTGCCAAAGACTCTCACGCCCAGTGTGTGGGTGAGGGAGAAAGGAAGATGGGATGCCTGCTTTCAGGGTCATGGCCTTACATAACTCACGCAGAAGCTCCCAGACT TR:VR 32:3 15:0 chr11 41985548 r_33 A . PASS END=63894473;SVTYPE=DEL;SVLEN=-21908925 TR:VR 42:3 23:0 chr16 34064683 i_302 A . PASS END=34064683;SVTYPE=INS;SVINSLEN=153;SVINSSEQ=ATTGAACAGAGTGGAGTGGAGTATAGTGGAATGGAATGCAATGGAATGGAATGGTGAAAGGAAATGTGAGCTGAGATTGTGCCACTGCACTGCAACCTGGTTTACAGAGTGAGATCCTGTCAAAAGAAAGGAAAGGAATGGGATGGATTTAGA TR:VR 197:13 44:0 chr2 90393526 d_743 G . Too_low_VAF END=90394183;SVTYPE=DEL;SVLEN=-657;SVINSLEN=112;SVINSSEQ=ACCTGAATGGAATCATCATCGATTGCAAACGAATGGAATCATCATCAAATGGAATCACATGGAATCATCAAATGGAACAGAATTGAATAATCATAGAATGGAATTGAACAGA TR:VR 421:4 157:1 chr8 144218631 i_1126 T . PASS END=144218648;SVTYPE=INS;SVINSLEN=275;SVINSSEQ=CGGCGGGTCGCGTCTCTCCCTCCTCTCCCTCCCCTCCCCCTCCCCCCTCCTCCCCTCCCCCCTCCTGTCCCTCCCCTCCCTCCCCTCCCCTCCTCCCCTCCTCCCCTCCCCTCCTCCCCTCCCTCCCCTCCCCTCCCTCCCCTCCCTCCCCTCTTCCCTCCCCTCCCTCCCCTCCCCTCCTTCCCCTCCCCTCCTCCTCCCCTCCTCCCCTCCCCTCCTCCCCTCCTCCCCTCCCCTCCTCCCCTCCTCCCCTCCCCCTCCCCTCCTCCCCTCCT TR:VR 32:3 6:0 chr1 232505886 r_16 G . PASS END=232602504;SVTYPE=DEL;SVLEN=-96618 TR:VR 63:10 17:0 chr11 42181938 r_34_0 C [chr9:20491655[G . PASS SVTYPE=BND;MATEID=r_34_1 TR:VR 41:13 24:0 chr9 20491655 r_34_1 G [chr11:42181938[G . PASS SVTYPE=BND;MATEID=r_34_0 TR:VR 41:13 24:0 chr14 16097109 d_245 A . Too_low_VAF;Too_small_size END=16097133;SVTYPE=DEL;SVLEN=-24 TR:VR 162:4 55:0 chr2 1527097 d_683 C . PASS END=1528532;SVTYPE=DEL;SVLEN=-1435;SVINSLEN=185;SVINSSEQ=CACTGTGGGCAACCCCCCCCCCAAATCCCCCACTGTGTGCAACCCCCCAAAACTCCCCCACTGTGAGCAAAACCACAAATCTCCCCAGTGTGTGCAGCCTCCTCAAATCCCCCCACTGTGCGCATCCCTCCAATCCCCTCCACTCTGTGCAACCTCCCCAAATTCCCCCAACTGTGTGCAACCTC TR:VR 62:4 14:0 chr6 32757020 d_1092 C . PASS END=32757224;SVTYPE=DEL;SVLEN=-204 TR:VR 34:3 13:0 chr10 73323884 d_132 C . PASS END=73323932;SVTYPE=DEL;SVLEN=-48;SVINSLEN=2;SVINSSEQ=CC TR:VR 20:16 14:0 chr11 42183569 r_35_0 A A[chr5:155103960[ . PASS SVTYPE=BND;MATEID=r_35_1 TR:VR 68:14 28:0 chr5 155103960 r_35_1 A ]chr11:42183569]A . PASS SVTYPE=BND;MATEID=r_35_0 TR:VR 68:14 28:0 chr14_GL000225v1_random 54283 d_304 G . Too_low_VAF END=54351;SVTYPE=DEL;SVLEN=-68;SVINSLEN=50;SVINSSEQ=GGTCCCGGGGGCAGAGAGCCCTCTGGGCCGCCTACGGTGCACGCGTGGGT TR:VR 612:9 206:1 chr20 28799075 d_812 C . Too_low_VAF END=28799189;SVTYPE=INS;SVINSLEN=114;SVINSSEQ=CACCATAGGCTGCAAAGGGCTCCAAATATCCACTTGCAGATTCTACAAAAAGAGAGTTTCAAAACTGCTCAATCAAAAGATAAGTTCAACTCGGTGAGTTGTATGCACACATTC TR:VR 204:3 59:0 chrX 143873956 d_1400 A . PASS END=143874671;SVTYPE=DEL;SVLEN=-715 TR:VR 36:9 9:0 chr10 13144294 r_20_0 G G]chr16:49504901] . PASS SVTYPE=BND;MATEID=r_20_1 TR:VR 66:9 20:0 chr16 49504901 r_20_1 A A]chr10:13144294] . PASS SVTYPE=BND;MATEID=r_20_0 TR:VR 66:9 20:0 chr18 109141 i_405 A . Too_low_VAF END=109141;SVTYPE=INS;SVINSLEN=337;SVINSSEQ=GGGAAGGTGAGAGATCTCTCGCCACTGATCACCCAAGTGATGTAAGTATTGTCTAGGCTTTGCCTACAGGGGCTTTGTGACATACCTTTGCAATGATCACCCAGTTGATGTCACTTTTAAGTTCTGCCTACAGGAGCTTTGTGACATATCTCTGCACTGACCACTTAGGTGATGTAACACTTGTCTAGGCTGTGCCTACACGGGAATTCTCACATATCTCTGCACTGATCACCCAGGTGATGGGACTCTTCTCTACACTCTGCCTAGAGGGGGATATTTGATATATCTCTGCACTGATCACGAAGGTGATGGAAGTCTTGTCTTGGCTCTGTCTATG TR:VR 304:4 80:0 chr22 10725410 d_905 C . PASS END=10725481;SVTYPE=INS;SVINSLEN=81;SVINSSEQ=CATTCCACTCGAGTCGTTTCCATTCCATTCCATTCCATTGCATTTCAGTCCTTTACATTCCATTTAATTTTAGTCCTTTCC TR:VR 150:15 53:1 chrX 52408360 i_1263 T . PASS END=52408423;SVTYPE=INS;SVINSLEN=153;SVINSSEQ=TCATCAAGCAAGTTGCCCACTCGTTTTCTCTTTTCTTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTGACAGAGTCTTGCTCTGTCGCCAGACTGTAGTGCAATAGTGCGATTTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATAC TR:VR 48:4 11:0 chr14 22250367 d_248 T . PASS END=22251350;SVTYPE=DEL;SVLEN=-983 TR:VR 41:9 8:0 chr22 10924573 r_155_0 G ]chr4:189282819]AGGCGAAAGATGTATATA . PASS SVTYPE=BND;MATEID=r_155_1;SVINSLEN=17;SVINSSEQ=AGGCGAAAGATGTATAT TR:VR 28:3 5:0 chr4 189282819 r_155_1 A AATATACATCTTTCGCCT[chr22:10924573[ . PASS SVTYPE=BND;MATEID=r_155_0;SVINSLEN=17;SVINSSEQ=ATATACATCTTTCGCCT TR:VR 28:3 5:0 chr2 1535559 d_686 T . PASS END=1535614;SVTYPE=DEL;SVLEN=-55 TR:VR 39:3 10:0 chr4 49632319 d_1007 G . Too_low_VAF END=49632408;SVTYPE=INS;SVINSLEN=244;SVINSSEQ=GAATGGAATGGAATCAACCCAAGTGGAATGGATTCGAATGGAGTGGAATGGAATGGAACAGCACGGAATGCAATGGAATCAAATAGAATGGAATGGAATGGAATGGAATGGAATGGAACGGAATCAACCTGAGTGGAATGGAATGGACCGGAACGGAATGGAATGAACACGAGTGTAAGGCAGTGGAATGGAACGGAGTAGAATGGAAAGGAACAGGAAGGAATGGAATGGAATGCAATGAACA TR:VR 259:4 85:0 chr6 3676316 r_219_0 A A]chr6:4071621] . PASS SVTYPE=BND;MATEID=r_219_1 TR:VR 62:9 20:0 chr6 4071621 r_219_1 A A]chr6:3676316] . PASS SVTYPE=BND;MATEID=r_219_0 TR:VR 62:9 20:0 chrX 52852156 d_1388 A . Too_small_size END=52852191;SVTYPE=DEL;SVLEN=-35 TR:VR 54:26 11:0 chr14 25891255 r_70 G . PASS END=76413374;SVTYPE=DEL;SVLEN=-50522119 TR:VR 72:7 16:0 chr18 12088840 i_407 T . PASS END=12088840;SVTYPE=INS;SVINSLEN=87;SVINSSEQ=GACCCTGTCCTGGCCCAGTCCAAGCCCTGACCCTCACCTTAGTGCTGCCATGCCCCTGCCACTGCCCTGGTCCTGGCCTGGAACCTG TR:VR 54:10 17:0 chr20 28869359 i_611 A . Too_low_VAF END=28869360;SVTYPE=INS;SVINSLEN=432;SVINSSEQ=ACTGTGTGAGATGAATGCCAGCATCACAAAGATGTTTCTCAGAAATCTTCTTTCTAGTTTTTATGTGAAGATATTTCCTTTTCCACCATAGGCCTAAAAACGATTGCACACATCACAAAGAAGTTTCCCAGGATTCTTCTACCTAGTTTTTATTTGAAGATATTTCCTTTTCCACCATAGGCATCCAAGCTCTCCAAATGTCCATTTGCAGATTCTACAAAAAGAGAGTTTCAAAACTCCCAATCAAAAGAAATGTTTAAATTTTTGAGGTGAATGCACACATCAGAAAGAAGTTTCTCAGAAATCTACTGTCTAGTTTTTATGTGAAGATATTTCCTTTTCCATCATAGGCCTCAAGGCACTCCAAACGTCCACTTGCTGATTCTTCAAAAAGAGAGTTTCAAAATTGCTCCATAAAAAGACAATTTTAAC TR:VR 133:3 48:1 chr6 3676319 r_220_0 T [chr6:4071632[A . PASS SVTYPE=BND;MATEID=r_220_1 TR:VR 62:10 20:0 chr6 4071632 r_220_1 A [chr6:3676319[A . PASS SVTYPE=BND;MATEID=r_220_0 TR:VR 62:10 20:0 chr7 1273319 d_1142 G . PASS END=1273610;SVTYPE=DEL;SVLEN=-291;SVINSLEN=73;SVINSSEQ=GCGAGGGTGTCGAATGGGGTGGGGACACGGGGTGCAGGTGTGGGGACAGGGCGAGGGTGTGGAATGAGGTGGG TR:VR 30:4 5:0 chr14 25891269 r_71_0 T [chr14:76633968[T . PASS SVTYPE=BND;MATEID=r_71_1 TR:VR 73:18 18:0 chr14 76633968 r_71_1 T [chr14:25891269[T . PASS SVTYPE=BND;MATEID=r_71_0 TR:VR 73:18 18:0 chr14_GL000225v1_random 56424 d_309 A . Too_low_VAF END=56572;SVTYPE=INS;SVINSLEN=166;SVINSSEQ=AGCTCCCTGGGTTCAGGCAGATCCTACACAACTGTTTCATCACTATACTGGTGATCAGTGCAGAGATATGTCACAATACTCGTCTAGGTAAATAGAGCCTAGTCAAGATTGTTACATCACCTGGGTGATCAGTGAGGAGATATGTCACAATGCTCCTGGTAGGCAG TR:VR 635:3 237:1 chr2 157293877 r_141 T . PASS END=157309348;SVTYPE=DUP;SVLEN=15471 TR:VR 89:6 19:0 chr4 176739940 i_837 A . PASS END=176739940;SVTYPE=INS;SVINSLEN=91;SVINSSEQ=GAATATATATAACTATATATTCGATATATCGAATATATATAACTATATATTCGATATATCGAATATATATAACTATATATTCGATATATCG TR:VR 18:16 8:0 chr9 137341664 d_1267 C . PASS END=137341668;SVTYPE=INS;SVINSLEN=112;SVINSSEQ=AGAGGAAACAGGGCTCAGGCACCAGGAGCCGTCTCCCAGGAGCCGTCTCCCAGGGGAGTCAGAGGAAACAGGGCTCCAGGCACCAGGAGCCGTCTCCCAGGGGAGTCCAGAG TR:VR 32:4 6:0 chrUn_KI270442v1 95212 i_1183 G . Too_low_VAF END=95212;SVTYPE=INS;SVINSLEN=461;SVINSSEQ=GAATGGAATGCATTAGAGTGGAATGGAATCAACTCGAGTGGAATGGAATGGAATGGAACAGAATGGAATGGAATGAAATTCAATGCAATTGAATGGAAAGGTATCAACTCGAGTGGAATGGAATAGAATGGAATGGAATGGAATGCAATAGAATGGAATGGAATCAACTCAAGTGGAATGGAATGGAGTTGAATGGAATGGAAGAGGAATGGAATGGAATGGAATGGAATGGAAGGAATGGAATGGAATGGAATGCAATAGAATGGAATGGAATCAATTCGAGTGGAATAGAATGGAATGGAACAGAATGGAATGGAATGCATTAGAATGAAATGGAATCAACTCGAATGGAATGGTATGGAATGGATTGGAATGGAATGGGATGGAGTGGAATGGAATGCATTTGAATTGAATGGACCTGAAGAGATTGGAATGGAATGGAATGGAATGAAGTGGCTTCG TR:VR 106:4 42:1 chr12 132233515 d_216 C . PASS END=132234269;SVTYPE=DEL;SVLEN=-754;SVINSLEN=34;SVINSSEQ=ACTCGATGGGGCGACAGAGGAGACAGCGTGGAGC TR:VR 40:3 11:0 chr2 90398342 i_557 A . Too_low_VAF END=90398342;SVTYPE=INS;SVINSLEN=1424;SVINSSEQ=CCAAATTGAATCGAATGGAATGATCATCAAAGACAATCGAAGGGAAACATCGAATGGAATGAACGGAGTCATCGAATGGAATCGATAGGAATCATCGAATGGATTCAAATGGAATCGTCATCGAATGGAAACGAACGAAATCATCGATTGGACAGGAATGGAATCATCATCAAATAGGATTGAATGGAATCATCAAATGGCATCGAATGGAATCATCTTCGAATAAAATCAAATGGAATAATCGAATGTACTCGAATGGAATCATCAAATGAATTTGAGAGGAATCATCATCGAATGGAATTGAATAGAATCATCAAATGGACTCGAATGGAATCCTCATTGAATGGAATCGAATGGAATCATTGAATGGAGTCGAATGGAACCATCATTGAATGGAATCACCAAATGGAATCAAATGGAATCATCATCAAATGAAATCAAATGGAATCATCAAATGGAATCGAATGGAATCATCATTGAATGGATTCGAATAGAATCTTTGAATGAAATTGAATGGAATCAGCATGAAATGGAATCTAAAGGAATCATAGAATGGTATCGAATGGAATCATCATCGAATGGAATGGAATGGAATGGAATGGAATGGAATCAGCATCGAATGGATTCAAAAGCAATCATTCAATGGACTCTAATAGAATCAGCGAATAGACTTGAATGTAATCATCATCGAATGGAGAAGAATGGAATCATCGAATGGACACGAATGGAATCATCATCAAATGGAATCGAATGGAATCATATAATGGACCCGAATGGAATCAAATTGAATGGAATAGAATGGAATCATCATCAAATGGAATCGAATGGAATCATCATCAAATAGAATCGAATGGAATCATCAAATGGATTCGAATGGAGTCATTGTGTAATGCAATCAAATGAAATCATAGAATAGAATCCCATGGAATCAACATCAAATGGAATCGATTGGAATCATTATCAAATAGAATTGAATGGAATCACTGAATGGAATCATCATCAAATAGACTCCAACGGAATCATCGAATTGACTCTAATGGAATCATCACTGAATGGAATAGAATGGAATAATCAAATGGAAACGAATGGAATCATCATCGAATGGAATCGAATGGTATCATCAAATGCACTTGAATGGAATCATCAATGAATGGAATCGAATGGTATAATCGAATGGAATCAAATGGAATCATCTTCGAGTGGAACTTAAAGGAATCGCCAAAGGACTCCAATGGAATAATCATCGTATGGAATCAAGTGGAATCATCGAATGTACTCGAATGGAATCATCGAATGTACTCGAATGGAATCATCGAATGGAATCGAATGGAATCAACGTCGAACGGAAAAGAAGGGAATCATCAAGTGGACACGAATGGAATCAACATCTAATGGAATGGAATGGAATCATCAAATGGAATGGA TR:VR 394:7 139:1 chr7 1273631 d_1144 A . PASS END=1273670;SVTYPE=INS;SVINSLEN=114;SVINSSEQ=CGGGGCGAGGGGTGAATCGGGGTGGGGACGGCGTGCAGGTGTGGGGACGGGCCAGGGTGTGAATGGGGTGGGGACGGGCGTGCAGGTGTGGGGACGGGGCGAGGGTGTGGAATG TR:VR 41:11 10:0 chr7 65369403 i_1000 C . PASS END=65369404;SVTYPE=INS;SVINSLEN=315;SVINSSEQ=TATACACTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTCACTGTATCCCCCAGGCTGGAGTGCAGTGGCGTGATCTCAGCTCACTGCAACCTCTGCAGCTGAGGCTCAAGCAATTCCCTTGCCTCAGCCTCCCCAGTAGCTGGGATTACAGGTGCCCACCACCATGCCTGGCTAATTGATTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGACCAGGTTGGTCTCGAACTCCTGGCCTCAAGCAATCCAACCACCTGGGCCTCCCAAAGTGCTGGAATTATAGGTGTGAGCCATCATGCCCACCCCACAA TR:VR 53:8 17:0 chr10 737899 i_73 T . Too_small_size END=737899;SVTYPE=INS;SVINSLEN=47;SVINSSEQ=TCAGACCCGGGACAGAGTGAGGCCTCAGACCCGGGACAGAGTGACGC TR:VR 44:5 11:0 chr4 176740029 i_839 T . PASS END=176740029;SVTYPE=INS;SVINSLEN=92;SVINSSEQ=CGAATATATATAACTATATATTCGATATATCGAATATATATAACTATATATTCGATATATCGAATATATATAACTATATATTCGATATAGCC TR:VR 18:16 8:0 chr5 209224 d_1037 C . PASS END=209341;SVTYPE=DEL;SVLEN=-117;SVINSLEN=50;SVINSSEQ=CCCACAAACACAGAAACAACCCTTCGCAGCCTGGCCACACACATCATTCC TR:VR 21:3 5:0 chr7 135570692 d_1179 A . Too_small_size END=135570733;SVTYPE=DEL;SVLEN=-41 TR:VR 56:12 12:0 chr2 16143336 r_125 A . PASS END=16145119;SVTYPE=DUP;SVLEN=1783;SVINSLEN=106;SVINSSEQ=GTTCACATAATATGATATATTATATTATATATTATATGCTATATAATTATATGTTTTATATTATTATAAATATTATATAATGTATATTATATATTATATATATTAT TR:VR 30:4 8:0 chr20 64132748 i_645 C . PASS END=64132749;SVTYPE=INS;SVINSLEN=167;SVINSSEQ=ATGGCCTATGAGACCCCCTCACTGTCCACCCTCATGTCCTATGAGACCCCCTCACTGTCCACCCTCATGTCCTATGAGACCCCCTCACTGTCCACCCTCATGTCCTATGAGACCCCCTCACTGTCCACTCTCATGTCCTATGAGAGCCCCTCACTGTCCACTCTCAT TR:VR 37:4 7:0 chrX 153389858 d_1402 G . PASS END=153389907;SVTYPE=DEL;SVLEN=-49;SVINSLEN=40;SVINSSEQ=CACACCACACACACACCATGCACACCACACACACACACCA TR:VR 47:3 8:0 chr2 90399086 d_750 A . Too_low_VAF END=90399065;SVTYPE=INS;SVINSLEN=420;SVINSSEQ=ATCATCGACTGGAAAAGAATGGAATCATCATCGAATGGAAATGAACAGAATCACAGAATGAAATCGAAAGGAATCATCATCGAATGGAGTCTAATGGAATAATCATCGAATGGAAAAGAACGGAATCATCGAATGGACAAGAATGGAATCATCATCAAATAAGATTGAATGGAATCATCAAATGGCATCGAATGGAACCACCATTCAATGGAATCGAATGGAATCATCATCAGCTGGAATTGAATGGAATCATCAAACGGACTCCAGTGGAATCATCGGAGAATGGAATCGAATGGAATTATCAAACGGACTCGAATGGAATAAACTTTGAATGGAATCGAAGGGAATCATCAAACGGAATCGAATGCAATCATCGAACGGAATCGAATGGCATCACCGAATGCAATCCAATGGAATCAC TR:VR 366:4 136:0 chr3 31963864 i_771 C . PASS END=31963864;SVTYPE=INS;SVINSLEN=3556;SVINSSEQ=CTGAAACCTCTGATGTGAACATTTCTTGCTACAGGATAACTCTGCTCCTGAGAACCAAGAAGGCTGGTGACAGGAAAATGCCCCCCTGAAGCTGGCTGGGGATCTCACTTAGGGGTGACATAAAGTGAGGGATGTGCTGCCAAATGTCCTTGATTCTTTCTCCCCAAACTAACAAGATCTTAATTAAGCTTCACTCCGGCAGACAATTCAGAGATAAGCTAAGTGCCAGTTGCCGGGGCGCTTCTAGAGGCCAAGGCTTTAACAGCCACCATCCAGTCATGGGAAGACTAGGACTGGGAAGTGGAATTTTATTGCCAAAGTGGGATGCTTTTGAGAGTAAAAGAGGTGCTATTAATACGTATACAGGAATAACAGCTGTAAACCAGAACTGTCTTAGGCAAACTGGGATGTATGATCCCCCTTTCTAGAATGGTGTTTTTCAGAAGCACTCTGCAATGCAAAAAATGTAGTCTGCTTTTCGGCATGTAACTCAGAACTCCTGCTGATGAACAGGAATCCTCCAAGACAAATCTGACTCCTGCTTCCATTTCCCCTAGAGCACAGAACAGGAGCACAGCCCCAGATGCTGCTGGGTTGGGGCCACTTTATAAAGCCCCTCTGGACCTCCAGGACATGGAAAAGATGCATGCAATGCTCCCCTGGGGAAGTAGCAACCAGCCTGGAATCTCAGGGACTCTTTGAAGATGTGCGGGCAGGAGGGAGGAAATTCTTGTAGCTGGGTGGGGTCAGAACACAGGCCTTTGCTCCACACTGACATTTTCTTCAAAGGTCAAGAATGTGTTTGGGCTTTGTAGATGTTTTGCCAGAATATGATTTAGGGGAAGTTCCAAGCCCGGAGATTCAGTTTTTAAGTCGGCTGTCTTCTGTTTCCATGCCACAGTGCATTCATTGATAGTATTTTTAGAAAAGGATCTTTGAAAATGGGAAGGCAGGTATGACAGCAGGGTGATTCATTGGCTGTGCCTCTGCACTGGATGTCTTGGGGGCTGGGCATGAGGTCCCGGACGCGTGTGGATCACAGAAGGGCATGGGCTGGTACCATGAAGCAGGCAGGAACCCAGAGCACTGCAACTGCGCTGTGAACTCTTAGGTAGACCAGAGAGGTGAGGCGGGAACCTGGAATTTGGATGTACTTGCAGAGCTGGGATGGCGCTGACACAGCCTCCTGTGTCACAGCTTCCATCTCGGTGCGCGGGTCAGAATGAGCACCAACGCACACGCAGGATCATGACTCACCTCCCGCCTGTCCCCCCTTGCCTTGCTGTCAGGCCTTACTGCTGAGTTACCACGTGTGTAGTTCTATGTGTGCTTGGGCACTCAACAGAGAGAGAGCTGAGATCTGCTCAGCTTTCTACTTAGCCAACGAATGTCCCACCTTCTGAGACTTCCCAGGTGCAAAACCCAGCATTCTCCTCCTAGTGAGAGGCAGCTGCCCTGCAGGGATGGACAGGCACTAGCTGACCCTCCAGGCTGAGGCGATGACAACCGGGAAAGATTTTCCATGCCTTTTTTGGTTCTACAAAAAAAAAAAACAGGAAGACTGAAAGAATGGTTTATAATTGATTCTTAACAAGGAAGGATAATTAAACTAATAATAGTGCTAACGATAATAATTACTAGATGCAGTAGCAAACATTCTTAAATTCAGCATTTCAACTAATCCTCACAAGGACCCGCTGAGGTTGGTATCATTAGCTCCATATTTGAGCTGGAGAAACAGAGGCAGAGAGAGGCTGAATTGCTTGCTTGCCTGACATCGCACTGCTGGGAAGTGGCGCCAGTGTGGGAGCTGTCCTGGTTCATGTGGGACACAGGGACAATGACAATTGGCCAGACAAGAATGTCCTTGGGCTCCCACTATCAAATCCCACAGCTCCCCCTGTGTTTCTCTCTGTTCTTTCCCCTTTCTAAATCGTGAGGAAGGCAAAGGTGGCCCTGCCTGTCCCAGGCTTGGGCATACTGAGGGGCCCTTCTCCTCTCTCTGCTCCAGCTTTTCTTATTCCCCATCGGGTCCTCCCATCAGCACTTACTGTCTCACGTCTCCCGTGAAAAAGAAACAGACAAAAGCTCTCTTCCTGGGGGCTTCCTCCCTCTTCTCTGTGCTTCCTTCCTGTGCCACTAAATTTCTAGCAAGAACTTGGGTGCGTCCACTTCACAGCCCGCTGCCATTTGCATTCTGCCCCCATCAGCACGGCCCGGTCACCCATCAGCTCATAACTGAACCCAGCGTCCGCCTCTGTCCCTGTCCCGCTCGCCTTCTCGGAGGATTCGAGAGCGGCCACTCCTTCCTGGCTGCAGCGCTCCCCTCTCTCCCTTTCCTCACGACACCTCCTCCTGATTCTCCCTCTCTTCCCCCAGCCGCTCCTTCCCAGTTTGCTTTACAGATGCTCCTCTTCCTGCCCACTCGTGAGGCTGAATTTTAGGTGTCAGCTTGACTGGGGCGCGGAGTGCCCACATATCCTAGGTTTGTCTATGAGGGTGCTTTTGGACCAGGAGCATTTGAATGGGTGGGTGGAGCAAGGCAGATGGCCCTCCCCAGTGGGTGTGTGGGCCTCGGCCAATCTGCTGCCGGCCTGAATAGAACACCAGGCGAGGGAAAGGAGAATTTACCCTCTCTGCCGGACTCTTCTGGAGCTGGAACCGCAGTCTCCCGCTGTCGAACTTGGACTAGAACTTACACCATCAGCTCTCTTGCTTTTCAGGCCTTTGGACTCAGACTGGAACTGGGTCTCCAGCTTCCTGATGGCAGATCTTGGGACTTCAGTCTTCACGACTGTGTGAGCCAATTCCTTATAATAAATCTCTTTATATATGTATTTATATATAATCTATGGGTTATTTCTCTGGATAACCCTGAATAATGCACCCTTCCACAGTGCTGGTGTCTCGGAGCACTCTTCACTTCTCCTTGCTCCTGTAACCCCATGTCTGTGATAACAGAATTTGTGTCACATTGTCCATTCTTTGAAGCTGTCAAAGCCAAGAACCCATAAACAAATCACAAATAGCAATAACCTACATTAGTTAACATTCCCCCTTTAACATGTTGACATTTTTACTAAAGGATTAGTTATTTTTGCATTTCCATTTCTCATATCCCATGACATTCCATATAAATTGCATTATTGCTTTATAGGCCACACAACATTCAAAAGTATGTTTATATGCATTGCCTGTTTTTCCTTGATCTGATAAGACTTTGATACTGATTTTACTACAGAAATTTAAGTTTGAAAATACCACAGTTAGTATTTCTTCTCAGAACGTTAATTGTTCACATCACTAATCACTACATGCATATTTAGCTCTGATTATATTGCTCAAAAACTGCACCCATTATCAGAACAGTGCAAATGATATTTAATTTTAAAAGTAATTATAATGGCTTGAATTCAAAGTCATTCAAATGAACACTGTCAAGTAATTTCACTTGATGTGTATATATTTCATCACCACTGTTTACATTACCCTTCTTTAAGTATAACCATCAATTCTTCAATTTCTTTTTATCAGTTTCCCTCCCAAGTCCCCAAAC TR:VR 25:8 10:0 chr7 69928944 r_243 T . PASS END=70085929;SVTYPE=DEL;SVLEN=-156985;SVINSLEN=2;SVINSSEQ=GT TR:VR 80:9 23:0 chr9 137565900 d_1270 T . PASS END=137566041;SVTYPE=DEL;SVLEN=-141;SVINSLEN=115;SVINSSEQ=GTCTGTGAGGAAGCTCCCCTGGGTGACTCTGTCTGTGAGGAAGCTCCCCGGGGTGACTGTCTGTGAGGAAGCTCCCCTGGGTTGACTCTGTCTGTGAGGAAGCTCCCCCGGGGTG TR:VR 33:3 8:0 chr17 83068393 d_595 A . PASS END=83068556;SVTYPE=DEL;SVLEN=-163;SVINSLEN=27;SVINSSEQ=GCGGGGGCGACAATGGGGTCCCGGGAG TR:VR 33:3 14:0 chr19 29902058 r_116_0 T TC]chr20:45728581] . PASS SVTYPE=BND;MATEID=r_116_1;SVINSLEN=1;SVINSSEQ=C TR:VR 77:5 30:0 chr20 45728581 r_116_1 A AG]chr19:29902058] . PASS SVTYPE=BND;MATEID=r_116_0;SVINSLEN=1;SVINSSEQ=G TR:VR 77:5 30:0 chr20 29283691 i_618 G . PASS END=29283695;SVTYPE=INS;SVINSLEN=689;SVINSSEQ=TCCTCAGAGGGCTCAAAACTATCCTTTTGCAGATTCTACAAAAAGATTGTTTCCAAACTGCTAAACCAAAAGAAAGGTTCAACTCTATGGGATGAATGCACACATCACAAAGAAGTTTCTCAAAATGCTTCTGTCTAGTTTTTATGTGAAGATATTTCCTATTTCACCAAAGTTCTCAAAGGGCTCAAAACTATCTCTTTGCAGATTCCACAAAAAGACCATTTCCAAACTGCTCTATGAATAGTAAGGTTCAATTCTATCCAATGAATGAAAAAATCACAAAGAAGTTTCTCAAAAATTTTCTGTCTAGTTTTCATATGAGGATATTTCCTATTTCACCATAGTCCTCAAAGGGCTCAAAAGTATCCCTTTGCACATTCTACAAAAAGACTGCTTCCAAACTGCTCAATCAAAAGAAAGGTTCAACCTTGTGCATTTGATGAACACATCACAAAGATGTTTATCAGAATCCTTCTGTCTAGTTTTTATGGGAAGATATCTCCTTTTTCACCATAGTTCTCAAACCTCTCACAAATATCCCTCTGCAGATTTTCAAAAAGATTGTTTCCAAAGTGCTCAATCAAAAGAAAGATTCACCTCTGTTAAACGAATGCACACATCAGAAAGAAGTTTCTCAAAATGTTTCTGTCTAGTTTTAATGTGAAGATAATTCCTTTTTGACTTTAGTC TR:VR 67:9 13:0 chr3 37063365 r_174 G . PASS END=66493474;SVTYPE=DEL;SVLEN=-29430109;SVINSLEN=1;SVINSSEQ=C TR:VR 56:16 14:0 chr6 152965364 d_1114 G . Too_small_size END=152965401;SVTYPE=DEL;SVLEN=-37 TR:VR 12:7 8:0 chrY 56841251 d_1435 A . Too_low_VAF END=56842008;SVTYPE=DEL;SVLEN=-757;SVINSLEN=213;SVINSSEQ=CAGGGTGCTTTACGACTTATCCCTGCGCTGATCACTAGTTGATGTAACACTTGTCTAGGCTCTGTCTACACGGGAATTTTCGCATATCTCTACACTGATCACCTAAGTAATGTAACCCTTGTCTAGGTTCAGCCTATTGGGGATTTCTGACATACCCATGCACTGATCACCGAAGTGATGTAAATCATTTCCAGGCTTTTTGTACAGGGGACG TR:VR 165:5 80:1 chr14 44144848 r_72_0 T TGGTG]chr14:44624837] . PASS SVTYPE=BND;MATEID=r_72_1;SVINSLEN=4;SVINSSEQ=GGTG TR:VR 62:9 21:0 chr14 44624837 r_72_1 G GCACC]chr14:44144848] . PASS SVTYPE=BND;MATEID=r_72_0;SVINSLEN=4;SVINSSEQ=CACC TR:VR 62:9 21:0 chr20 64132859 i_649 A . PASS END=64132859;SVTYPE=INS;SVINSLEN=100;SVINSSEQ=GAGACCCCCTCACTGTCCACCCTCATGTCCTATGAGACCCCCTCACTGTCCACCCTCATGTCCTATGAGACCCCCTCACTGTCCACCCTCATGTCCTATG TR:VR 36:3 7:0 chr3 37067437 r_175 T . PASS END=53554507;SVTYPE=DUP;SVLEN=16487070 TR:VR 44:4 19:0 chr6 55628198 i_934 A . PASS END=55628198;SVTYPE=INS;SVINSLEN=121;SVINSSEQ=CTATATATATATATATATACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCG TR:VR 40:3 11:0 chrY 56841245 d_1436 C . Too_low_VAF END=56841542;SVTYPE=INS;SVINSLEN=309;SVINSSEQ=CGCAGGAAGCGGCATTGTGACGTATTTCTGAACTGATCATCCTTTAGATGTAACTATTCTCCAGGCTTTGACTAAAGAGCGTCTGAAGGTGTTGGGAGAGCCTCAGCCGGAATTTCACAGACAGACAAGGGCACAGAGGCTAGCGGGCTCCCTTGCATGTCAGCCGGGGTGCGCAATTAGCCCAGGTCTAGCCAGGAGCATGGCAAAAAGAGCTAGAGGTCTGTGTTCTGCCGCCAGGCGCTCCATGGTGGCAGCTGGGAGGCTGCAGGGACTCTTGCTTACGCTCTGCCTGCAGTTGCATTTTGAAAT TR:VR 124:4 66:0 chr14 44586880 r_73_0 A [chr14:44625138[G . PASS SVTYPE=BND;MATEID=r_73_1 TR:VR 68:10 19:0 chr14 44625138 r_73_1 G [chr14:44586880[G . PASS SVTYPE=BND;MATEID=r_73_0 TR:VR 68:10 19:0 chr2 90400474 d_753 G . Too_low_VAF;Too_small_size END=90400503;SVTYPE=DEL;SVLEN=-29;SVINSLEN=6;SVINSSEQ=AAATCA TR:VR 294:5 122:1 chr3 37104463 r_176_0 A A]chr3:37133867] . PASS SVTYPE=BND;MATEID=r_176_1 TR:VR 50:13 20:0 chr3 37133867 r_176_1 T T]chr3:37104463] . PASS SVTYPE=BND;MATEID=r_176_0 TR:VR 50:13 20:0 chr7 142450120 r_246 G . Too_low_VAF END=142526501;SVTYPE=DUP;SVLEN=76381 TR:VR 139:3 26:0 chrY 56841191 i_1309 T . Too_low_VAF END=56841191;SVTYPE=INS;SVINSLEN=454;SVINSSEQ=GAAGGTGTTGGGAGAGCCTCAGCCGGAATTTCACAGACAGACAAGGGCACAGAGGCTAGCGGGCTCCCTTGCATGTCAGCCGGGGTGCGCAATTAGCCCAGGTCTAGCCAGGAGCATGGCACAAGAGAGCTAGAGGTCTGTGTTCTGCCGCCAGGCAGGCTCCATGGTGGCAGCTGGGAGGCTGCAGGGACATGGGCGGGCCGGTGGAGATAGCGTGGAAGTGCAGAGTAGGCGAGCCGCTGGTGGGGCGGGTGTCAGGCCTGGACGCTGCGCAGGACCGGTGTTTCGCGGGACGTGGGTCTCCACCCAGCCCAAGGGAGGATGCATTTTCCCGGGGGTGGGTCGTGGTGCTGGGGTGGGGAGAAACCAGCCTGGCAGGGCTGGGGTGGTGGAAAGGCATGAGAGCTCTGCCCAGGCTGCTCCCACAGCACAGGTGGCTGCCCGCAAACCCGCT TR:VR 125:4 65:0 chr11 61145023 r_36_0 A A]chr11:63889903] . PASS SVTYPE=BND;MATEID=r_36_1 TR:VR 63:9 21:0 chr11 63889903 r_36_1 T T]chr11:61145023] . PASS SVTYPE=BND;MATEID=r_36_0 TR:VR 63:9 21:0 chr13 18214191 r_63_0 A [chr21:10360053[AACATATATATTGTATATAAAG . Too_low_VAF SVTYPE=BND;MATEID=r_63_1;SVINSLEN=21;SVINSSEQ=AACATATATATTGTATATAAA TR:VR 338:11 123:1 chr21 10360053 r_63_1 G [chr13:18214191[TTTATATACAATATATATGTTG . Too_low_VAF SVTYPE=BND;MATEID=r_63_0;SVINSLEN=21;SVINSSEQ=TTTATATACAATATATATGTT TR:VR 338:11 123:1 chr3 37109967 r_177 T . PASS END=55981922;SVTYPE=DUP;SVLEN=18871955 TR:VR 46:12 16:0 chrX 68349391 i_1268 T . PASS END=68349391;SVTYPE=INS;SVINSLEN=319;SVINSSEQ=AAAAAGTCAGGAAATAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGAAGGCCGAGGCAGGCAGATCACGAGGTCAGGAGATGGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTAGCGGGCGCCTGTAGTCCCAGCTACTCGGAAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA TR:VR 45:6 11:0 chr11 61145030 r_37_0 A [chr9:19923597[A . PASS SVTYPE=BND;MATEID=r_37_1 TR:VR 40:9 11:0 chr9 19923597 r_37_1 A [chr11:61145030[A . PASS SVTYPE=BND;MATEID=r_37_0 TR:VR 40:9 11:0 chr13 18235064 d_219 G . PASS END=18235083;SVTYPE=INS;SVINSLEN=100;SVINSSEQ=ACATCGCTAACGAAGATGGATTCCACGGCATCGATAATGAGGACGCCGTCCAGTGCATCGCCGAGGACGCCGTCCAGGGCATCGCCACCTGGCACGCCGT TR:VR 17:4 14:0 chr18 20815231 i_415 G . PASS END=20815231;SVTYPE=INS;SVINSLEN=166;SVINSSEQ=CTGTATCATAAGAAAGTTGAACTCTGTTAGTTGAGGACACACATCACAAAGAAGTTTCTGAGAATGCCACCGTCTAGATTTTACCTGAAGATATTCCGGTTTCCAAAGAAATCCTTAAAGCTCTCCAAATATCCACTTGCAGATTCTCCAAAAAGCGTCTTTCAAA TR:VR 19:3 3:0 chr3 37122509 r_178 G . PASS END=99891536;SVTYPE=DEL;SVLEN=-62769027;SVINSLEN=2;SVINSSEQ=GG TR:VR 42:6 29:0 chr6 161983924 r_235_0 A A[chr9:6290480[ . PASS SVTYPE=BND;MATEID=r_235_1 TR:VR 60:3 27:0 chr9 6290480 r_235_1 A ]chr6:161983924]A . PASS SVTYPE=BND;MATEID=r_235_0 TR:VR 60:3 27:0 chr11 61146506 r_38_0 C C[chr9:16250854[ . PASS SVTYPE=BND;MATEID=r_38_1 TR:VR 43:10 25:0 chr9 16250854 r_38_1 A ]chr11:61146506]A . PASS SVTYPE=BND;MATEID=r_38_0 TR:VR 43:10 25:0 chr18 20922915 i_416 A . Too_low_VAF END=20922916;SVTYPE=INS;SVINSLEN=172;SVINSSEQ=GAATCTGGAAGTGGATATTTCGATAGCTCTAACGATTTCGTTGGAAACGGGAATATCTTCATATAAAATCTAGACAGAGGCACTCTCAGAAACTACTTTGTGAGATCTGCATTCAAGTCACAGAGTTCAACATTCCCTTTCGTAGATCTGGTTTGATAGACTCTTTTGTAGT TR:VR 94:3 37:1 chr2 87413087 i_538 C . PASS END=87413087;SVTYPE=INS;SVINSLEN=320;SVINSSEQ=AGGCAGCCAAGCCAGCCAATGAGAAGATGCCAGCCCGCCAGCCAGCCAGAACAGGCATGCCAGCCAAGCCAATACCGCAGCCATTCCAGCCATAGCCAGCCAGGCCAGCCAGCCAAGACAGGCATGCCAGCCAAGCCAGCCAGGCAGCCAAGTCAGCCAAGCCAGGCAGCAAGCAAAGCCAGGCATGCCAGCCAGACAGCCAGCCAGGCAGCCAAGCCAGCAAAACCAGCCAGCCAGCCAAGCCAGGCATGCCAGCCAAGCCATCCAGCCAGCACAAGCCAGCCGGCTAGCCAAGCCAGACAAGCCACCCGGCCATCCAA TR:VR 165:9 67:0 chr3 37124636 r_179 A . PASS END=150384552;SVTYPE=DUP;SVLEN=113259916 TR:VR 42:12 25:0 chr11 61146794 r_39_0 A ]chr9:19923477]G . PASS SVTYPE=BND;MATEID=r_39_1 TR:VR 40:16 12:0 chr9 19923477 r_39_1 G G[chr11:61146794[ . PASS SVTYPE=BND;MATEID=r_39_0 TR:VR 40:16 12:0 chr13 27034336 r_64_0 A [chr6:85609885[T . PASS SVTYPE=BND;MATEID=r_64_1 TR:VR 40:4 18:0 chr6 85609885 r_64_1 T [chr13:27034336[T . PASS SVTYPE=BND;MATEID=r_64_0 TR:VR 40:4 18:0 chr2 90401974 i_561 A . Too_low_VAF END=90401983;SVTYPE=INS;SVINSLEN=263;SVINSSEQ=ACGCAATTAACAAATGGAATCGAAAAGAATCTTCGAATGGACTCGAATGGAATCTTCGAATACAATGGAATGTAATGGATGGACTCGAATTAAATCATCATCAAATGGATTCGAATAGAATCATCGAATGGACTTGAATGGAATAATCATCAAATATCAAAAGCAATCATCAAATTGATTCGAATAGAATCATCAAATGGATTCGAATGGAATAATCATCGAATGGAATCAAATGAATCATCGAACAGACTTGAATGAAATCA TR:VR 251:4 102:1 chr3 37192613 r_180 A . PASS END=55988005;SVTYPE=DUP;SVLEN=18795392 TR:VR 36:6 22:0 chr4 59454337 r_199_0 G [chr4:59456551[T . PASS SVTYPE=BND;MATEID=r_199_1 TR:VR 29:8 13:0 chr4 59456551 r_199_1 T [chr4:59454337[T . PASS SVTYPE=BND;MATEID=r_199_0 TR:VR 29:8 13:0 chr7 71680879 i_1009 C . PASS END=71680879;SVTYPE=INS;SVINSLEN=249;SVINSSEQ=TCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTCTCTCCCTTCCCTCCCTCCCTCCCTGTCTTCCTCCCTCCCTCTCTCCCTTCCTCCCTCTCTCCCTGTCTTCCTTGCGCGCGCAAAAAAAAAAAAAAAAAAAAAAGCACATGCTGTACAAGCGCGGCTTTTTTACAAAAGTGTGTGTGTGTGTTTTTTTTT TR:VR 53:4 21:0 chr9 15365237 i_1136 G . PASS END=15365256;SVTYPE=INS;SVINSLEN=322;SVINSSEQ=CTAGATTGGTCTGCTGACAAGAGTGTCAATTTTTGGTGTTTGCACCCTTAGCTAGACAGAAAAGTTCTCCAAGTCCTCACCCATTAGCTAGGCACAGAGTTGACTACACGACAAACCTTAGCCAGATGCAGAGTGCTGACTGTACCACAAACCTTTAGTTCTGTGATGAAAGTTCTCTAGTCCCCACCCGATTAGCTAGGCACAGAGCGCTCATTGGTGCATTTACAATCCTTTAGCTAGACAGAAAAGTTCTCCCAAGTCCCCACCTTGATTAGCTAGGCACACAGAGCTGATTGGTGATTTACAAACCTTTAGCCAGACA TR:VR 30:3 12:0 chr11 61892838 r_40_0 G G[chr9:19969507[ . PASS SVTYPE=BND;MATEID=r_40_1 TR:VR 36:18 15:0 chr9 19969507 r_40_1 G ]chr11:61892838]G . PASS SVTYPE=BND;MATEID=r_40_0 TR:VR 36:18 15:0 chr18 43393895 d_624 T . PASS END=43393944;SVTYPE=DEL;SVLEN=-49 TR:VR 27:14 13:0 chr4 59454759 r_200_0 G G]chr4:63915024] . PASS SVTYPE=BND;MATEID=r_200_1 TR:VR 74:7 26:0 chr4 63915024 r_200_1 T T]chr4:59454759] . PASS SVTYPE=BND;MATEID=r_200_0 TR:VR 74:7 26:0 chr5 356966 d_1040 C . PASS END=359373;SVTYPE=DEL;SVLEN=-2407;SVINSLEN=113;SVINSSEQ=GCCCGGGAGTGGAGGCCCTCAGTCACGGAGTCCACCCGGGCAGTCAGCGACTGGGGAAGAGCGCCCGGGAGTGGAGGCCCTCAGTCACGGAGTCCACCCGGGCAGTCAGCGAC TR:VR 32:6 9:0 chr9 16229763 r_249 T . PASS END=27758929;SVTYPE=DEL;SVLEN=-11529166;SVINSLEN=41;SVINSSEQ=GACTTTTTTAGAACCAGTGGTGTATATTGATAATAAACGGC TR:VR 23:4 32:0