##fileformat=VCFv4.3 ##fileDate=20230117 ##source=nanomonsv-0.5.0 ##reference=/projects/jfan_prj/jfan_prj/Nanopore_Testing/2021_nanopore_sv_testing/scratch/depth_testing/POG/COLO829/hg38_no_alt.fa ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##FILTER= ##FILTER= ##FILTER= ##FILTER= ##FILTER= ##FILTER= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##ALT= ##ALT= ##ALT= ##FORMAT= ##FORMAT= #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT TUMOR CONTROL chr3 118514460 r_203 A . PASS END=118942657;SVTYPE=DUP;SVLEN=428197 TR:VR 35:10 14:0 chr3 90485300 i_875 T . PASS END=90485300;SVTYPE=INS;SVINSLEN=515;SVINSSEQ=ATGAAAAGGTGTGTTTAACTCTGTGCGTGGAATGCAAACATCACAAAGAATTTTCTGAGAATGCTTCTGTCTAGTTTTTATGTGAAGATATTTCCTTTTCCACCATAGGCCTCAAAGCTCTCCAAAAGTCCAATTCCAGTTTCTACAAAAAGAGTGCTTCAAAGCTGCTCTATAAAAACAAAGTTTCAAAACTGTGAGTTGAATGCACACATCACAAAAAAGTTTCTGAGAATGCTTCTGTCTAGTTTTTACGTGGAGATATTCCCGTTTCCAACAAAGTCCTCAAAGCAATCCAAATATCCACTTGCAGATCCTATGGAGACAGTTTTTCAAAACTGCTCAATGAAAAGGTATGTTCAACTCTGTGAGTTGAATTCAAATATCACAAAGAAGCTTCTGAGAATGCTTCTCTCTAGTTTTTAAGTGAAGATATTTCTTTTACCACCATAGGCCTAAAACGATCTCCAAATGTCCACTTGCAGATACTACAAAAACAGTGTTTACAAACTGCTCCA TR:VR 40:9 7:0 chr7 130882791 i_1204 A . PASS END=130882791;SVTYPE=INS;SVINSLEN=337;SVINSSEQ=AGACCCATATGAAACAGTTAGAAAATGATATAAATGACATGTGATTGAGTTGGAGGAGAAAAAGAACCAATAAATTACTTTTTATGAGTTGGGAGAAATCAGAACAGAACAGAGTATTGTCTTGGTGTGTACAATGGTCACAGTGAGTGAATCAGTGATGTAAGGGGAGTGTGGCCCAAGATATGTGTGCTGAGATGGACTGCAATGACATGTGGTTACTAACTGCAGAAAGCAATGTCTGCACCTCAAGTAACTGATTATTTAGTGCCCTTTTCTGTGTTTTCTTCTATGTACAATGGAATTATCTAAAGCTATCGTATAGTTAATATTTAAGTGA TR:VR 30:3 8:0 chr9 134207308 i_1317 A . PASS END=134207308;SVTYPE=INS;SVINSLEN=370;SVINSSEQ=GTCCTCCCCACGTGTCCTCCCGACCTGTCCTCTCCACCCGTCTCCCCCTCCATCCTCCCCACCTGTCCTCCTCACCTGTCCTCCCAGTGGTCCTCCCCCCATCCTCCCCACCTGTCCCCTCCCCACCTGTCCTCCCCACCTGTCCTCCCCATCGGTCCTCCGTACCAGTCCTCCCCCATCCTCTCCAGCGGTCCTCCCCACGTGTCCTCCCCACCTGTCTCCTCCACCCGTCTCCCCTCCGTCCTCCCCACCTGTCCTCCTCACCCGTCCTCCTCCCCTACTGGTCCTCCCCCCATCCTCCCCACCTGTCCTCCCCACCTGTCCTCCCCACCGGTCCTCCGTACCAGTCCTCCCCCATCCTCTCCAGCCG TR:VR 42:11 2:0 chrY 56844030 i_1434 T . PASS END=56844030;SVTYPE=INS;SVINSLEN=427;SVINSSEQ=AGGCTCTGTCTACAGGGATTTTTTTGATATATCACTGCACTGATCACCTAGGTGATGTAAGCCTTGTATGGGCTTTGCCTACAGAAGGCTTTGTGAAATATCTCATCCAGCCTGTGGACTGCGGCAGGTGCAGCCAGGAGGCCTGCCCGGACAGCCAGCCAGCGGCTATTATGAAGGCCTGCAGGCAGGCAGGCTCCACCCCTTCATGAATGGCGGTGAGCCCTGGGACAGCACGCCCCACCCCGGAAGGGTCCCAGGGCGTCGAGGCCTGCGGCTGTGGGGTGGTTGTGTTGGGGGGAGGGGGTGTGGTGATGGCGGTGGTGGGGCTGGAGATACGAAGATGAAGGGGGCGAGGGGGAAGTGGTGAGAGGGGCGCGTTTCCGGGGCTGGCTCTGCCGACCTCTCCAGGAATCAGGCGGGAACTGGA TR:VR 71:5 26:0 chr1 150549065 r_18_0 C CG[chr3:181695430[ . Too_low_VAF SVTYPE=BND;MATEID=r_18_1;SVINSLEN=1;SVINSSEQ=G TR:VR 174:4 9:0 chr3 181695430 r_18_1 C ]chr1:150549065]CC . Too_low_VAF SVTYPE=BND;MATEID=r_18_0;SVINSLEN=1;SVINSSEQ=C TR:VR 174:4 9:0 chr17_GL000205v2_random 54682 r_116_0 A ]chr3:9278313]A . PASS SVTYPE=BND;MATEID=r_116_1 TR:VR 120:51 36:0 chr3 9278313 r_116_1 A A[chr17_GL000205v2_random:54682[ . PASS SVTYPE=BND;MATEID=r_116_0 TR:VR 120:51 36:0 chr2 132033310 i_684 C . PASS END=132033311;SVTYPE=INS;SVINSLEN=51;SVINSSEQ=ATTATTTCATTTCATTTCATCATTTCATTTCATTTCCTCATTTCATGATTT TR:VR 37:4 11:0 chr21 42589921 d_1060 T . PASS END=42590114;SVTYPE=DEL;SVLEN=-193;SVINSLEN=91;SVINSSEQ=ACCTGCACCGAGCCTCCCGCCCCGTTTATATCCACGCAGGCGTTTCCCCTTACCTGCACCGAGCCTCCATTCCCGTTTACATCCACGCAGG TR:VR 20:7 2:0 chr3 118534591 r_204 C . PASS END=119615110;SVTYPE=DEL;SVLEN=-1080519 TR:VR 47:12 7:0 chr6 56098390 i_1135 T . PASS END=56098390;SVTYPE=INS;SVINSLEN=398;SVINSSEQ=ATAAGTATATATAAATATATAAATATATATAAATATATATAAATATATATAAATATACAAATATATATAAATATACAAATATATATAAATATATATAAATATATATAAATATATAAAAATATATATAAATATATAAATATATATAAATATAAAAATATATATAAATATATAAATATATATAAATATATATGTAAATATATAAATATATATAAATATATATGTAAATCTATATATAAATATATAAATATATATAAATCTATATATAAATATATAAATATATATAAATCTATATATAAATATATAAATATATATAAATATATGTATAAATATATAAATATATATAAATATATGTATAAATATATAAATATATATAAAAATATATATATGAATATATAAAA TR:VR 27:18 7:0 chr9 134685270 i_1318 T . PASS END=134685270;SVTYPE=INS;SVINSLEN=525;SVINSSEQ=CACCCATCCATCCATCCATCCACCATCCATCCATCCACCATCCATCCATTCATCCATCCATCTGTCCATCCATCCATCCATCCGTCCATCCACCATCCATTCACCCATCCATTCATCCATCCATCCACCATCCATCCATTAATTCATCCATCCATCCATCCATCCATCCATTCATCCATCCACCATCCATCCATCCATCCATCCACCATCCATCCATCCATCCACCATCCATCCATCCACCATCCATCCATTCATCCATCCATCCATTCATCCATCCATCATCCTCCATTCATCCATCCATCCACCATCCATCCATTCATTCATCCATCCATCCATCCGTCCATCCATCCATCCATGCATCAATCATCCATCCACCATCCATCCATTCATTCATCCATCCATCTGTCCATCCATCCATCCATCCATCCACCCATCCATTCACCCATCCATCCATTCATCCATCCATCCACCATCCATCCATTAATTCATCCATCCATCCATCCATTCATCCACCATCCATCCACC TR:VR 32:4 8:0 chrY 56843968 i_1435 C . PASS END=56843985;SVTYPE=INS;SVINSLEN=386;SVINSSEQ=CCACGCGTCTTCAGCAGGGAGAAACCGGCCTGGGAGGGTGGAGGGGAGTGTGGGACTGAATCTCCGTGGGAGTCTGCTGTGTTCCAGGCCCTCTCTCCGTGAAGGTGGCAGTGCCTGTGGGTGTCGCCATTGCCGGGACAGTGTCTAGCAGGGGCAGGCGTGTGGCTCTCGTTCATTTCCACGTAGGAGACCAGGCGAGACCCCAGAGAGAAGATGCCTCCCCAGCGTGATGGACTGATGATGGATTCCCGTGTGCGGCAACATGGGGGAGTCTTCGGTGTGGCAGTTTTGGAAACTGGCAAGGGAGGCAGAAGGCACAATGCCAGTCTTCCACCTTGCCTGCATGTTTCAGTGCCCGCAGAGCTCCGGGAGCAAACAGTCAGCAT TR:VR 76:6 29:0 chr12 34498736 d_410 G . PASS END=34498854;SVTYPE=INS;SVINSLEN=194;SVINSSEQ=CTCAATCAAAAGGAAGCTGTAACTCAGGTAGATGAATGCACACATCCCAAAGCAGTTTGTCAGAAAACTTCTTTCTAGTTTTTATCTAAAGATATTTCCTTTTTCACCATAAACCTCAATGTGCTCCCATTTTCTCAGCTAGCTTCCTTCTAGTTTTCATCCTGAGATTTTAGCTTTTTCACCATTGGCCACAA TR:VR 43:3 13:0 chr14 34499762 r_77_0 A ]chr3:100182969]A . PASS SVTYPE=BND;MATEID=r_77_1 TR:VR 145:34 10:0 chr3 100182969 r_77_1 A A[chr14:34499762[ . PASS SVTYPE=BND;MATEID=r_77_0 TR:VR 145:34 10:0 chr17_GL000205v2_random 62122 r_117_0 C C[chr3:81463164[ . PASS SVTYPE=BND;MATEID=r_117_1 TR:VR 122:55 32:0 chr3 81463164 r_117_1 G ]chr17_GL000205v2_random:62122]G . PASS SVTYPE=BND;MATEID=r_117_0 TR:VR 122:55 32:0 chr21 43336348 i_824 C . Too_low_VAF END=43336348;SVTYPE=INS;SVINSLEN=368;SVINSSEQ=GGCTCAACTGGAAGTCATCATGCCCAGACTCAAGCAAACAGGACACGTGTATCTAGTTCACTCAGAATGGGAGCTAGAAGGGGCTTTGACATCAGCTAGTTCATTAAGGTCCTCATTGTCACCATCGTCATTACTATTGCCATCATAATCACCATCATCACTATCATCACCACCACCACATCCACCATCGTCACCACCACCAGCACCAGCACCACCACTACCATCACTACCACCACTGTCACCATCACCATTACCATCCACCACCACCACCACCATCACCGCTACCACCATTACCACCATCAGAAGCACCATCACCACCATCACCACCACCACCACTGCCAACATCACCATCAACATCACCACCACTC TR:VR 155:4 64:0 chr3 121878929 r_205_0 A [chr3:138420542[G . PASS SVTYPE=BND;MATEID=r_205_1 TR:VR 32:4 19:0 chr3 138420542 r_205_1 G [chr3:121878929[G . PASS SVTYPE=BND;MATEID=r_205_0 TR:VR 32:4 19:0 chr6 56098534 i_1136 T . PASS END=56098534;SVTYPE=INS;SVINSLEN=490;SVINSSEQ=ATGTAAATATATAAATATATATAAATATATATATAAATATGTAAATATATATAAATATATATAAATATATATAAATATATATAAATATATATAAGTATATATAAATATATAAATATATATAAATATATATAAATATATATAAATATACAAATATATATAAATATACAAATATATATAAATATATATAAATATATATAAATATATAAAAATATATATAAATATATAAATATATATAAATATAAAAATATATATAAATATATAAATATATATAAATATATATGTAAATATATAAATATATAGAAATATATATGTAAATCTATATATAAATATATAAATATATATAAATCTATATATAAATATATAAATATATATAAATCTATATATAAATATATAAATATATATAAATATATGTATAAATATATAAATATATATAAATATATGTATAAATATATAAATATATATAAAAATATATATATGAATATATAAAAAA TR:VR 27:18 6:0 chr7 135277438 d_1389 A . Too_small_size END=135277484;SVTYPE=DEL;SVLEN=-46 TR:VR 34:23 1:0 chr10 36146907 d_262 C . PASS END=36147249;SVTYPE=DEL;SVLEN=-342 TR:VR 26:11 8:0 chr13 113347340 d_466 A . PASS END=113347431;SVTYPE=DEL;SVLEN=-91;SVINSLEN=1;SVINSSEQ=T TR:VR 23:8 1:0 chr14 34660762 r_78 G . PASS END=34772016;SVTYPE=DUP;SVLEN=111254 TR:VR 282:31 13:0 chr2 132034224 i_686 T . PASS END=132034224;SVTYPE=INS;SVINSLEN=155;SVINSSEQ=TCAACATTTCATTACATTTCATCATTTCACTACATCTCATCATTTCATCTCTCATTGCATTACTTCATTTCATCTCATCATTTCATTTCATCATTTCATCATTTCATCTCATTTCATTTCATCTCATCATTTCATCATTTCATTTTATTCTTTCA TR:VR 37:5 12:0 chr2 91809072 d_905 C . PASS END=91809690;SVTYPE=DEL;SVLEN=-618;SVINSLEN=10;SVINSSEQ=GTCTTTTTCA TR:VR 38:13 5:0 chr3 122548603 r_206 C . PASS END=124628332;SVTYPE=DEL;SVLEN=-2079729;SVINSLEN=40;SVINSSEQ=CTCCTTCCCTCCTTCCTTCCTTCCCTCCCTCCCTCCTTCA TR:VR 32:6 18:0 chr5 1307589 i_1059 A . Too_small_size END=1307589;SVTYPE=INS;SVINSLEN=45;SVINSSEQ=TATATTTATATATGTATATTTATATATGTATATATTTATATATGT TR:VR 34:21 6:0 chr5_GL000208v1_random 82072 i_1114 T . PASS END=82072;SVTYPE=INS;SVINSLEN=512;SVINSSEQ=TCACACATCACAACGAACTTTCTGACAATGCTTCTATCTAGTTTTTATGTGAAGATATTACTGTTTCCTATGAAGGCTTCAAAGTGGTCCTAATATCCACTTTCAGCTTCTACAAAAAGAGTTTCAAAACTCCTCTATGAAGAGGTATGTTCAACTCTGTGAGTTGAATGGAAACATCACAATATAGTTTCTGAGAATGCTTCTGTCTAGTTTTTAGGGGAAGATATTTCCATTGGCACAATAGCCCTCAAAGCGCTCCAAATATCCACTGGCAGATTCTACCAAAAGAGTGTTTCAATACTGCTCTGTGAAAAGAAATGTTCAACTGTGTTAGTTGAATGCCCACATCACAAAGAAGATTCTGAGAATATTTCTGTCTAGTTTTTATTAGAAGATATTCCCGTTTCCACCAAAGGACACAAAGCGAAGCCAATTATCCGCTTGCAGATCTTACAAAAACACGTTTCAAAACAGCTCTATCCAAGGAAAGGTTCATCTCTCAGGGTTCAACG TR:VR 30:4 7:0 chr10 36467084 r_28 A . PASS END=43458609;SVTYPE=DUP;SVLEN=6991525 TR:VR 61:13 12:0 chr12 34501625 d_412 C . PASS END=34501727;SVTYPE=INS;SVINSLEN=109;SVINSSEQ=AAAAACAGTGTTTCCATGCTGCTGAATCAAAAGAATGGTTTAACTCTGTGAGATGAATGCACACATCTCAAAGCAGTTTTTCAGAACGCTTCTTTCTAGTTTTTATCTG TR:VR 40:5 11:0 chr14 34758633 r_79_0 T [chr14:34773072[G . PASS SVTYPE=BND;MATEID=r_79_1 TR:VR 243:27 19:0 chr14 34773072 r_79_1 G [chr14:34758633[G . PASS SVTYPE=BND;MATEID=r_79_0 TR:VR 243:27 19:0 chr17_KI270729v1_random 157963 i_454 T . PASS END=157964;SVTYPE=INS;SVINSLEN=581;SVINSSEQ=TGATTCCATTTGATGATTCTGTTCGATTCCTTTCAATGATTCCCTATGATTCCTTTCTGTGATGATTGCTTTCGATTCCATTCGTTGATGATTCCATTCGATTCCATTCGATGATGATTCCTTTTGATTCCCTTTGTTGATGATTCCATTAGATTCCATTTGATGATAATTCCTTTCGACTCCATTCCAAGATGATTCCATTCGATTCCATTCAATGATTCCTTTCGATTCCATTTGATGATGAGCCATTCGTTTCAATTCCATGATGATTCCATTTGATTCAATTCGAAGATGTTTCTATTCGATTCCATTTGATGATGATTCCACTCAATTCCATTTGACTATGTTTCCATTCGAGTCCATTCAATGATGATTCCATTTGATTCCGTTCAATTATGATTCCATTCAATTTCATTCAATGCTTCTATGTGATTCCATTCGGTGATGATTCCATCTCATTCCCTTAGATGATTCCATTCAATTCCATTCAGTGATGATTTCATGTGATTCCATCTGATGATGATATCATTTGATTCCTTTCGATGATGATTCCATTCGAGTCCATTCAATGATTCCATTGG TR:VR 28:4 5:0 chr19 54737202 d_789 T . PASS END=54737523;SVTYPE=DEL;SVLEN=-321;SVINSLEN=1;SVINSSEQ=G TR:VR 41:5 11:0 chr2 132034916 i_687 A . PASS END=132034916;SVTYPE=INS;SVINSLEN=442;SVINSSEQ=TTTCATTACATTTCATCATTTCATCACTTCACTTCATCTCATCATATCATCTTACATTGCATTATTTCATTTCATCTCATCATTTCATTTCATCATTTCACTTCATCTCATCATTTCATCACATCATTTCATTTCATCTCATCATTTCATTTCATCTTTTCATCTCCTCATTTCATTTAATCATTTCATTTTATTTCACCTTTTCATCTCATCATTTCATCAATTCATCATTTAATTTCATTTTTTCATCATTTCATCATTCACTTCATTTCCTCATTTCATTTCATCATTTCATATCATTTCCTCAATTCATCACTTCATCTTTTCATTTCATTTCATCGTTTCATTTCATTTCACTTCATTATTTCATTTCATTTCATTTCACCATTTCATGTCATCATTTCCTCATTTCATTTCATCATTCCATTTCATCATTTCATTT TR:VR 35:5 12:0 chr20 29262124 d_983 G . PASS END=29262234;SVTYPE=DEL;SVLEN=-110;SVINSLEN=108;SVINSSEQ=CGCTACGTGGCCTATGGTGGAAAAGGAAATATCTTAACATAAAAACTAGACAGAAACATTCTGAGAAAGTTCCTTGTGATGCATGCTTTCAACTCACAGGCTTGAGCC TR:VR 48:3 22:0 chr3 125117587 r_207 C . PASS END=141150822;SVTYPE=DEL;SVLEN=-16033235 TR:VR 46:9 15:0 chr5 1307589 i_1060 A . Too_small_size END=1307589;SVTYPE=INS;SVINSLEN=45;SVINSSEQ=TATATTTATATATGTATATTTATATATGTATATATTTATATATGT TR:VR 34:21 6:0 chr1 143231668 d_155 A . Too_low_VAF END=143232598;SVTYPE=DEL;SVLEN=-930 TR:VR 979:4 662:1 chr14 34840050 r_80_0 A A]chr14:36481223] . PASS SVTYPE=BND;MATEID=r_80_1 TR:VR 234:75 10:0 chr14 36481223 r_80_1 G G]chr14:34840050] . PASS SVTYPE=BND;MATEID=r_80_0 TR:VR 234:75 10:0 chr19 54738092 i_520 C . PASS END=54738092;SVTYPE=INS;SVINSLEN=406;SVINSSEQ=TCAGCCTCTTGAGTAGCTGGCATTACAGGTGTCTGCCACCAGGCACGGCTAATTTTTGAATGTTTAGCAGAGACACGGTTTCACTATGTTGGCCAGGCTGCTCTCAAACTCCTCATCTCAGTTGATCTGCCCACCTGCGGCTTCCCAACATGCTGGGGGAAACTTGATTTTCTATAGCATTATGTTACTGGATATTTCTGTAAAATTTAAAATGAGGGAGGGACAGAGACAGAGAGAGAGCAAACCCAGAGTTGGGACTCTGGAATCTTGGGTCATGAGACAAATTATAGATAAAACTATAAAAATCCAGAATTTACATGTGTGGTTTTTGCTGATAAAGTACAATTCGAAGATTGTAAATAATTGCATAATCCTTCCCTGGGAATTTAAATCATTTTAACTGGTT TR:VR 41:6 10:0 chr6 107651252 i_1158 G . PASS END=107651274;SVTYPE=INS;SVINSLEN=100;SVINSSEQ=TGAGACCCTGTCTTAAAAGAAAAAAAATGCTGAGATAGTCCAAAAGCTAAACCTCTTGGGTCAGTTAGCCAAGTAGTGAATGCAAAGGAAGAGTTAAGGA TR:VR 18:4 4:0 chrUn_KI270757v1 59444 i_1375 A . PASS END=59444;SVTYPE=INS;SVINSLEN=472;SVINSSEQ=TGCAGACAACACAAAGAAGTTTCTCAGACTCTTTTTGTAGAATCTGCATGTGGGCATTTGGAACGCTTTGCTGCCTATCTTAGAAAAGGAAATATCTTCACATAGAATGTAGAGAGAAGCAATCTGAGAAACTTCTTTGTGATGTGTGAATTCATCTCACAGAGTTAAACCTCTCATTTGTTTAATCAGTTTTTTAACTCTCTTTTTGTATAATCTGCAAGTGGACATTTGGAGCGCTTTGAGGCCTATAGTGGAAAAGGAAACATCTTCACCTAAAAACTAGACAGAAGAATTCTGAGAAACTTCTTTGTGATGTGTGTGTTCATCTCACAGAGTTGAGCATTCTTTTGAATGAGAAGTTTGGAAACAATCTTTTTGTGGAGTCTGCAGGTGGACTGTCACAAAGAGAGAGTTTCAAAACTGCTCAATCAAAAGAAAGTTTTAACTCTGTGAGATGAATACACACATCACA TR:VR 111:11 65:1 chr1 2668203 d_10 G . Too_low_VAF END=2668305;SVTYPE=DEL;SVLEN=-102;SVINSLEN=22;SVINSSEQ=AAGAGCAACCACACCCCCAGGC TR:VR 113:3 35:0 chr12 363882 r_44_0 A A]chr8:52033589] . PASS SVTYPE=BND;MATEID=r_44_1 TR:VR 101:15 19:0 chr8 52033589 r_44_1 T T]chr12:363882] . PASS SVTYPE=BND;MATEID=r_44_0 TR:VR 101:15 19:0 chr17_KI270729v1_random 162604 d_730 A . PASS END=163206;SVTYPE=DEL;SVLEN=-602;SVINSLEN=19;SVINSSEQ=TGATTCCATTCGAGTCCAT TR:VR 34:12 8:0 chr19 54739188 i_521 T . PASS END=54739189;SVTYPE=INS;SVINSLEN=98;SVINSSEQ=ATGATCCTGGAATGTAGTTATGGGCCTGGAGGTGGAGATCTGGGCCCGGGGTGGAGATATGGGCCTGGAGTGGAGATATGGGCCTGGAGAGGAGATAT TR:VR 41:6 13:0 chr3 136053798 r_208_0 G G]chr9:18222947] . PASS SVTYPE=BND;MATEID=r_208_1 TR:VR 31:7 18:0 chr9 18222947 r_208_1 T T]chr3:136053798] . PASS SVTYPE=BND;MATEID=r_208_0 TR:VR 31:7 18:0 chr11 9026545 r_35_0 G ]chr4:190119437]A . PASS SVTYPE=BND;MATEID=r_35_1 TR:VR 89:8 33:0 chr4 190119437 r_35_1 A A[chr11:9026545[ . PASS SVTYPE=BND;MATEID=r_35_0 TR:VR 89:8 33:0 chr13 114052707 i_286 T . PASS END=114052707;SVTYPE=INS;SVINSLEN=284;SVINSSEQ=TAGAGTCCTCGCTCCTGGGGAGAGATCCCCGCTGCTGACTGTGCTTGAGAGTCCTGGCTCACCTGGGGAGAGACCCCCGCTGCTGACTGTGTTCAGAGTCCTCGCTCCTGGGGGAGAAATCGCCACTGCTGACTGTGCGCGTGAGAGTCCCTCGCTCCTGGGGGAGAGACCCCCGCTGCTGACTGTGCTTAGAGTCCTGGCTCCTGGGGGAGAGACCCCCCGCTGCTGACTGTGCCTTAGAGTCCTCGCTCCTGGGGGAGAAATCGCCACTGCTGACTGTGCGT TR:VR 22:3 1:0 chr19 1134138 i_492 C . Too_small_size END=1134138;SVTYPE=INS;SVINSLEN=39;SVINSSEQ=CACAGCTCACGGGTGGACTCACAGCTCACGGGTGGACTC TR:VR 19:8 3:0 chr3 140384416 r_209_0 G [chr3:140384662[A . PASS SVTYPE=BND;MATEID=r_209_1 TR:VR 21:9 7:0 chr3 140384662 r_209_1 A [chr3:140384416[A . PASS SVTYPE=BND;MATEID=r_209_0 TR:VR 21:9 7:0 chr6 147093524 d_1331 T . PASS END=147093610;SVTYPE=DEL;SVLEN=-86 TR:VR 17:11 8:0 chrX 45136833 d_1602 T . PASS END=45136809;SVTYPE=INS;SVINSLEN=220;SVINSSEQ=TATTTATATATTTATATATTTTTATATATATTTATATATTTATATATTTATTTATATATTTATATATATTTATATATATATTTATATATTTATATATATATTTATATATTTTTATATATATTTATATATTTATATATTTATTTATATATTTATATATATTTATATATATTTATATATATTTATTTATATATATTTATATATATTTATATATATTTATATG TR:VR 28:22 9:0 chr1 2675301 d_13 A . Too_low_VAF END=2675400;SVTYPE=DEL;SVLEN=-99;SVINSLEN=19;SVINSSEQ=TCCTCGAGCAAGCACCCAC TR:VR 131:5 39:1 chr10 39229918 d_263 C . PASS END=39230072;SVTYPE=DEL;SVLEN=-154 TR:VR 21:12 3:0 chr21 44407132 r_163_0 T [chrX:2227713[CCCTCCCTCCCTTCCTCCCTCCCTCCCTCCCTTCCTCCCTCCCTCCCTTCCTTCCCTCCCTCCTTTCCTCCCTCCCTCCCTTCCTCCCTCCCTCCCTTCCTCCCTCCCTCCCTCCCTTCCTCCCTCCCTCCCA . PASS SVTYPE=BND;MATEID=r_163_1;SVINSLEN=132;SVINSSEQ=CCCTCCCTCCCTTCCTCCCTCCCTCCCTCCCTTCCTCCCTCCCTCCCTTCCTTCCCTCCCTCCTTTCCTCCCTCCCTCCCTTCCTCCCTCCCTCCCTTCCTCCCTCCCTCCCTCCCTTCCTCCCTCCCTCCC TR:VR 131:10 34:1 chrX 2227713 r_163_1 A [chr21:44407132[GGGAGGGAGGGAGGAAGGGAGGGAGGGAGGGAGGAAGGGAGGGAGGGAGGAAGGGAGGGAGGGAGGAAAGGAGGGAGGGAAGGAAGGGAGGGAGGGAGGAAGGGAGGGAGGGAGGGAGGAAGGGAGGGAGGGA . PASS SVTYPE=BND;MATEID=r_163_0;SVINSLEN=132;SVINSSEQ=GGGAGGGAGGGAGGAAGGGAGGGAGGGAGGGAGGAAGGGAGGGAGGGAGGAAGGGAGGGAGGGAGGAAAGGAGGGAGGGAAGGAAGGGAGGGAGGGAGGAAGGGAGGGAGGGAGGGAGGAAGGGAGGGAGGG TR:VR 131:10 34:1 chr3 140384637 r_210_0 A A[chr9:18215442[ . PASS SVTYPE=BND;MATEID=r_210_1 TR:VR 35:9 10:0 chr9 18215442 r_210_1 A ]chr3:140384637]A . PASS SVTYPE=BND;MATEID=r_210_0 TR:VR 35:9 10:0 chr5 474709 i_1048 A . PASS END=474709;SVTYPE=INS;SVINSLEN=196;SVINSSEQ=GGTTCAGGTCCAGGGAGGAGAGAGACAGCGCGCGCGAGGCGGAGACCTGGAGGGAGAGGCTGCGGAGAGGGGTTAGGCGGGGAGGGAGAGAGCCAGGTTCAGGTCCAGGGAGGAGAGAGACAGCGCGCGGGGGGCGGAGACCTGGAGAGGAAGGCTGCGGAGAGGGGGTTAGGCGGGGAGAGAGAGCAAAGCCAGG TR:VR 30:4 5:0 chr7 85110766 d_1377 A . PASS END=85111037;SVTYPE=DEL;SVLEN=-271 TR:VR 30:7 6:0 chr1 241665452 r_21 A . Too_low_VAF END=242019390;SVTYPE=DEL;SVLEN=-353938 TR:VR 98:4 12:0 chr14 35084955 r_81 A . Too_low_VAF END=36149772;SVTYPE=DUP;SVLEN=1064817 TR:VR 228:8 18:0 chr14_GL000225v1_random 179197 r_97_0 G [chr22:10746331[A . Too_low_VAF SVTYPE=BND;MATEID=r_97_1 TR:VR 64:3 21:0 chr22 10746331 r_97_1 A [chr14_GL000225v1_random:179197[A . Too_low_VAF SVTYPE=BND;MATEID=r_97_0 TR:VR 64:3 21:0 chr5 138831594 d_1284 C . Too_small_size END=138831637;SVTYPE=DEL;SVLEN=-43 TR:VR 24:16 4:0 chr7 905657 d_1341 A . PASS END=906417;SVTYPE=DEL;SVLEN=-760;SVINSLEN=56;SVINSSEQ=AAGGAGAAGGGGAGAAGGGAGAAAGGAGAAAGGAGAAAGGAGAAGGAAAGAAAGGA TR:VR 18:7 1:0 chr8 144801372 d_1484 C . Too_small_size END=144801409;SVTYPE=DEL;SVLEN=-37 TR:VR 52:9 4:0 chr9 136802784 i_1324 A . PASS END=136802784;SVTYPE=INS;SVINSLEN=1899;SVINSSEQ=AGGTGAGCTCAGGGCCCAGGGGCTGGGGCTCCCCAGGGCCAGCCCTCTTGGATCTTCGGATGGGGTCAAGGTGAGCTCAGGGCCCAGGGCTGGGGGCCCCCCAGGGCCAGCCCTCTTGGATCTTCGGATGGGGTCAAGGTGAGCTCAGGGCCCAGGGCCGGGGGCCCCCCAGGGCCAGCCCTCTTGGATCTTCGGATGGGGTCAAGGTGAGCTCAGGGCCCAGGGCCGGGGGCCCTCCAGGGCCAGCCCTCTTGGATCTTCGGATGGGGTCAAGGTGAGCTCAGGGCCCAGGGCCGGGGCCCCCAGGGCCAGCCCTCTTGGATCTTCGGATGGGGTCAAGGTGAGCTCAGGGCCCAGGGCCGAGGGCCCCCAGGGCCAGCCCTCTTGGATCTTCGGATGGGGTCAAGGTGAGCTCAGGGCCCAGGGCAGGGGGCCCCCAGGGCCAGCCCTCTTGGATCTTCGGATGGGGTCAAGGTGAGCTCAGGGCCCAGGGCCGGGGGCCCCCCAGGGCCAGCCCTCTTGGATCTTCGGATGGGGTCAAGGTGAGCTCAGGGCCCAGGGCTGGGGCCCCCCAGGGCCAGCCCTCTTGGATCTTCGGATGGGGTCAAGGTGAGCTCAGGGCCCAGGGCCAGGGGCCCCCCAGGGCGGGCCCTCTTGGATCTTCGGATGGGGTCAAGGTGAGCTCAGGGCCCAGGGCCGGGGCCCCCAGGGCCAGCCCTCTTGGATCTTCGGATGGGGTCAAGGTGAGCTCAGGGCCCAGGGCTGGGGCCCCCAGGGCAGGCCCTCTTGGATCTTCGGATGGGGTCAAGGTGAGGCTCAGGGCCCAGGGCCGAGGGGCCCCCAGGGCGGGCCCTCTTGGATCTTCGGATGGGGTCAAGGTGAGCTCAGGGCCCAGGGCCGGGGGCCCCCCAGGGCGGGCCCTCTTGGATCTTCGGATGGGGTCAAGGTGAGCTCAGGGCCCAGGGGCCGGGGCCCCCAGGGCCAGCCCTCTTGGATCTTCGGATGGGGTCAAGGTGAGCTCAGGGCCCAGGGCCGCGGGGGCCCCCAGGGCCAGCCCCTCTTGAATCTTCGGATGGGGTCAAGGTGAGCTCAGGGCCCAGGGCCGGGGCCCCCAGGGCCAGCCCTCTTGGATCTTCGGATGGGGTCAAGGTGGGCTCAGGGCCCAGGGCTGGGGCCCCCCAGGGCCAGCCCTCTCTGGATCTTCGGATGGGGCTTCAGTGAGCTCAGGGCCCAGGGCTGGGGGCCCCCAGGGCCAGCCCTCTTGGATCTTCGGATGGGGTCAAGGTGAGCTCAGGGCCCAGGGCCAGGGCCCCAAGGCCAGCCCTCTTGGATCTTCGGATGGGGTCAAGGTGAGCTCAGGGCCCAGGGCAGGGGGCCCCCAGGGCCAGCCCTCTTTGGATCTTCGGATGGGGTCAAGGTGAGCTCAGGGCCCAGAGCCGGGGGCCCTCAGAGACAGCCCCTCTTGGATCTTCGGATGGAATTAAAGGAGTGAGCTCCAGGGCCCAGGGCTGAGGCCCTCCAGGGCCAGCCCTCTTGGATCTTCGGATGGGGTCAAGGTGAGCTCAGGGCCCAGGGCTGGGGGCCCCCCAGGGCCAGCCCTCTTGGATCTTCGGATGGGGTCAAGGTGAGCTCAGGGCCCAGGGCCGGGGAGCCCCCAGGGCCAGCCCTCTTGGATCTTCGGATGGGGTCAAGGTGAGCTCAGGGCCAGGGGCCGGGGTGGGCCCCCCAGGGCCCAGCCCTCTTGGATCTTCGGATGGGGTCAAGGTGAGCTCAGGGCCCAGGGCAGGGGGCCCCTCCCAGGGCCAGCCCTCTTGGATCTTCGGATGGGGTCAAGGTGAGCTCAGGGCCCAGGGCTGGGGCCCTCCAGGGCCAGCCCTCTTGGATCTTCGGATGGGGTCA TR:VR 28:8 4:0 chr1 1293738 d_2 T . Too_small_size END=1293776;SVTYPE=DEL;SVLEN=-38 TR:VR 12:4 2:0 chr11 94425510 i_213 G . PASS END=94425537;SVTYPE=INS;SVINSLEN=184;SVINSSEQ=GATGCTGAGATGCAAAAATCTATACACAAGATCAATGAAACCAAGTATTGGTTCTTCAAAAGAATAAATAAGACAGACCACCCTAGCTATATTAACAAAGAAAAAAAGGAGATCCAAATAAGTCCAATGAGAAATGACAATGATGATATTATAACTAATCCTACAGAAATCAAAAACTGCATGT TR:VR 46:6 10:0 chr13 21377702 r_52 G . PASS END=34042098;SVTYPE=DEL;SVLEN=-12664396;SVINSLEN=22;SVINSSEQ=CGTGACCTCCACCCCTAGTGCC TR:VR 57:7 25:0 chr14 35110285 r_82 A . PASS END=36175670;SVTYPE=DEL;SVLEN=-1065385 TR:VR 246:15 13:0 chr14_GL000225v1_random 24434 d_496 T . Too_small_size;Too_low_VAF END=24453;SVTYPE=INS;SVINSLEN=19;SVINSSEQ=CATCTGGGTGATTTAACTC TR:VR 99:3 16:0 chr3 142320563 r_211 T . PASS END=148303465;SVTYPE=DUP;SVLEN=5982902 TR:VR 81:34 10:0 chr3 94758347 r_181 T . PASS END=142885639;SVTYPE=DUP;SVLEN=48127292 TR:VR 123:34 15:0 chrUn_KI270438v1 75690 d_1530 T . Too_low_VAF END=75669;SVTYPE=INS;SVINSLEN=324;SVINSSEQ=GGAAACGAATGAAATGGAATCAAATGGATTTGCATGGAATAGAATGGAATGGAACGGAAAGAGATAGAATGGAATGGAATCGGATGGAACCGAATGGGAAGGAATGGAGTAGAATGGAAAAGAATCGAATGGAATATCATTGAATGGAATGGAATGGAATGGAAAGGAATGGAATGGAAAGGAAAGGAATGGAATGGAACAGAATGGAATGGACCTAAATGTAATGGGCTCGAATGGAGTGGACTCGAATAGAATGGACTCGAAAGGAATGGTCTCGAGTGGAATTTATTTGAATACAATGGAATCGAATGGAATGCAATAGTA TR:VR 292:10 17:0 chr1 242026972 i_84 T . PASS END=242026972;SVTYPE=INS;SVINSLEN=450;SVINSSEQ=AAAATTTATTTACTACTCATTAAATGGAAATGGATCATCATAAAGGTCATCACATTGAGTAGGCTGAGGAGGAGGAAGAGGAAGAGGAGTTTTTGCTTTCTCGGGGTGTCAGAGGCAGAAGAAAATCTGCCTGTATGTGGACCCACACAATTCAAACCCATATTGTTTGTGGGTCAACTGGAGTCACCATGTTATTCAACAAGTCTCTCGAAAATTTTCTCCTCCTGTCAAACTAAACCTTTGTATCCTTTGACCAACAGCTCCCCAGATCCCCCAAACTCCCACGCCCACCATTCTACTCACTGCTTCTATCCGTTCAAAATTTTTAGATTCCACATATAAGTGTAAACATGCAGTATTTGTGAATCTGAAGAAATACACATAACTCACTGATGTCACTTCATAAACACAGATTTCAAATGGGCTCTCAGAACTGCTCAAAAAACCTAT TR:VR 53:6 8:0 chr14 35126641 r_83_0 T [chr14:36146989[C . Too_low_VAF SVTYPE=BND;MATEID=r_83_1 TR:VR 245:8 18:0 chr14 36146989 r_83_1 C [chr14:35126641[C . Too_low_VAF SVTYPE=BND;MATEID=r_83_0 TR:VR 245:8 18:0 chr15 20103704 d_574 T . PASS END=20104014;SVTYPE=DEL;SVLEN=-310 TR:VR 65:6 16:0 chr3 142357171 r_212_0 T [chr3:146642027[T . PASS SVTYPE=BND;MATEID=r_212_1 TR:VR 121:15 10:0 chr3 146642027 r_212_1 T [chr3:142357171[T . PASS SVTYPE=BND;MATEID=r_212_0 TR:VR 121:15 10:0 chr3 94765432 r_182 T . PASS END=142885803;SVTYPE=DEL;SVLEN=-48120371 TR:VR 126:42 16:0 chr6 164931789 i_1161 A . Too_small_size END=164931790;SVTYPE=INS;SVINSLEN=37;SVINSSEQ=TGTATACATATATGCATATATAACACATATGCGTATA TR:VR 17:4 6:0 chr7 90895324 i_1202 T . PASS END=90895324;SVTYPE=INS;SVINSLEN=62;SVINSSEQ=TCTCTCCTCTCCTTTCCTCTCCTCTCCTCTCCCTCTCCTCACCCTCTCCTCCCCCTCCCCCC TR:VR 31:3 10:0 chr8 145072944 i_1290 T . Too_low_VAF END=145072956;SVTYPE=INS;SVINSLEN=69;SVINSSEQ=GCTGGGTCAAATGGTATTTCTGGTTCTATATCTTTGAGGAATTTTCACACTGTCTTCCACAATGACTGA TR:VR 70:3 10:0 chr1 166735293 d_200 A . PASS END=166735633;SVTYPE=DEL;SVLEN=-340 TR:VR 58:3 2:0 chr14 35131578 r_84 G . Too_low_VAF END=36037688;SVTYPE=DEL;SVLEN=-906110;SVINSLEN=1;SVINSSEQ=C TR:VR 215:5 13:0 chr19 21720256 r_124_0 C [chr2:174087492[CTCCCTCTCCCTC . PASS SVTYPE=BND;MATEID=r_124_1;SVINSLEN=12;SVINSSEQ=CTCCCTCTCCCT TR:VR 57:3 11:0 chr2 174087492 r_124_1 C [chr19:21720256[AGGGAGAGGGAGC . PASS SVTYPE=BND;MATEID=r_124_0;SVINSLEN=12;SVINSSEQ=AGGGAGAGGGAG TR:VR 57:3 11:0 chr20 15252436 r_150 T . PASS END=15956385;SVTYPE=DUP;SVLEN=703949 TR:VR 102:6 11:0 chr3 142808113 r_213 T . PASS END=150183353;SVTYPE=DEL;SVLEN=-7375240 TR:VR 109:7 19:0 chr3 94765742 r_183 G . PASS END=104715970;SVTYPE=DUP;SVLEN=9950228 TR:VR 39:7 9:0 chrUn_KI270442v1 137751 d_1550 A . PASS END=138543;SVTYPE=DEL;SVLEN=-792;SVINSLEN=110;SVINSSEQ=GGCCAGTAAGCACTCTTAATAACAACTTGCAGACACTGGAAGAAGACTGTTTCAAAACTGCTCTATCAACAGAAAGGTTCAACTCTGTGAGTTGAATGCACACATCCCAA TR:VR 49:7 26:0 chr10 39543677 i_126 G . PASS END=39543677;SVTYPE=INS;SVINSLEN=171;SVINSSEQ=GAAATATCTTCACTTAAAAACTACACGGAAACATTCTCAGAAACTTCGTTGTGACGTTTGCTTTCAACTCACAGAGTAGAACACTAATTTTCATACAGCAGTTTTGAAACACTCTTTTTGTATTGTTTGCATGTGGATAATAGTACCACTTTGAGGTCTTCGTTGGAAACG TR:VR 40:3 10:0 chr13 31103432 r_53_0 G [chr13:31106207[A . PASS SVTYPE=BND;MATEID=r_53_1 TR:VR 51:11 14:0 chr13 31106207 r_53_1 A [chr13:31103432[A . PASS SVTYPE=BND;MATEID=r_53_0 TR:VR 51:11 14:0 chr14 35468848 r_85_0 G G[chr3:100161254[ . PASS SVTYPE=BND;MATEID=r_85_1 TR:VR 186:37 13:0 chr3 100161254 r_85_1 G ]chr14:35468848]G . PASS SVTYPE=BND;MATEID=r_85_0 TR:VR 186:37 13:0 chr19 21721341 d_766 G . PASS END=21721356;SVTYPE=INS;SVINSLEN=69;SVINSSEQ=TGGGGGGGTCAGCCCCCCGTCCGGCCAGCCGCCCAGTCCGGGAGGGAGGTGGAGGGTCAGCCCCCCGCC TR:VR 28:4 5:0 chr2 50634443 d_816 A . PASS END=50634742;SVTYPE=DEL;SVLEN=-299;SVINSLEN=1;SVINSSEQ=T TR:VR 22:6 6:0 chr20 15256865 r_151 T . PASS END=15336953;SVTYPE=DEL;SVLEN=-80088 TR:VR 98:8 15:0 chr20 29927303 i_746 A . PASS END=29927304;SVTYPE=INS;SVINSLEN=685;SVINSSEQ=AAACTAGACAGAAGCATTCTCAGAAACTTGTTTGTATTGTGTGCATTCAACTCACAGAGTTGAACCTTTCCTTTGATTGAGTAGCTTTGAAAAAGTCTTTTTGTAGAATCCACAAGTGGATATTTGGAGCAGCTTGAGGCCTATGGTGTAAAAGGAAATATCTTCACATAAAAACTAGACAGAAGCATTCTCAGAAACTTCTTTGTGTTGTGTGCATTCAACTCACAGAGTTGAGCTTTTCCTATGATTGAGCAGTTTTGAAACACTCTTTCTGGAGAATCTGCAAGTGGATATTTGGAGCGCTTTGAGGCCTGTGGTGGAAAAGGAAACACCTTCACAAAAAAACTAGAGCAGAAGCATTCTCAGAAACGTCTTTATGATGTGTGCATTCAACTCACAGAGTTGACACATTCTTTGATAGAGCAGTTTTGAAACACTCTTTTTGTGGAATCTGCAGTTGGATATTTGGAGCGCTTTGATGCCTATGGTGGAAAAGGAAATATCCGCACATAAAAACTAGACAGCAGCATTCTCAGAAACTTGTTTGTGTTGTGTTCATTCAACTCACAGAGTTGACCTTTCCTTTGATTGAGCAGTTTTGAAAAAGTCTTTTTGCAGAATCTGCAAGTGGATATTTGGAGCGGTTTGAGGCCTATGGTGTAAAAGGAAATACCTTCACATAAAA TR:VR 19:6 2:0 chr3 142883198 i_889 C . PASS END=142883198;SVTYPE=INS;SVINSLEN=58;SVINSSEQ=AAAAAAAAAAAAAAAAAAAAAAAAAAAAGACAGAGTAAAGGTACTCCGTCTCAAAAAA TR:VR 108:36 10:0 chr8 47871803 i_1251 T . PASS END=47871803;SVTYPE=INS;SVINSLEN=128;SVINSSEQ=TGGTCTCAAACTCCTGACCTCAGGAGATCCACCAGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCACGCCTGGCTTATTTTTAGTAGAGACAGGGTTTCATCATGTTGACCAGGCT TR:VR 40:24 4:0 chr1 169854920 r_19 A . PASS END=171593313;SVTYPE=DEL;SVLEN=-1738393 TR:VR 99:7 8:0 chr14 35547956 r_86_0 C C]chr14:37678262] . PASS SVTYPE=BND;MATEID=r_86_1 TR:VR 137:8 23:0 chr14 37678262 r_86_1 A A]chr14:35547956] . PASS SVTYPE=BND;MATEID=r_86_0 TR:VR 137:8 23:0 chr19 21722728 r_125_0 A A]chr2:174087503] . PASS SVTYPE=BND;MATEID=r_125_1 TR:VR 57:3 10:0 chr2 174087503 r_125_1 T T]chr19:21722728] . PASS SVTYPE=BND;MATEID=r_125_0 TR:VR 57:3 10:0 chr2 54234730 r_141_0 T [chr8:85781061[AC . Too_low_VAF SVTYPE=BND;MATEID=r_141_1;SVINSLEN=1;SVINSSEQ=A TR:VR 193:9 15:0 chr8 85781061 r_141_1 C [chr2:54234730[TC . Too_low_VAF SVTYPE=BND;MATEID=r_141_0;SVINSLEN=1;SVINSSEQ=T TR:VR 193:9 15:0 chr20 15869239 i_719 A . PASS END=15869246;SVTYPE=INS;SVINSLEN=48;SVINSSEQ=TATATATATATATATATATATATATATATATATATATATATATATATA TR:VR 48:5 11:0 chr20 29929404 i_747 G . PASS END=29929404;SVTYPE=INS;SVINSLEN=342;SVINSSEQ=CTCACAGGGTTGAACCTTTCCTTTGATTGAGCAGTTTTGAAAAAGTCTTTTTGTAGAATCTGCAAGTGGATATTTGGAGCAGTTTGAGGCCTATGGTGTAAAAAGAAATATCTTCACATAAAAACTAGACAGAAGCATTCTCAGAAACTTGTTTGTGTTGTGTGCATTCAACTCACAGAGTAGAACCTTTCTTTGATAGAGCAGTTTTGAAACACTCTTTTTCTAGAATCTGCAGTTGGATATTTGGAGCGCTTTGATGCCTATGGTGGAAAAGGAAATATCCGCACATAAAATCTAGACAGCAGCATTCTCAGAAACTTGATTGTGTTGTGTGCATTCAAC TR:VR 21:5 5:0 chr21 5311915 d_1038 A . PASS END=5312033;SVTYPE=INS;SVINSLEN=119;SVINSSEQ=ATTAAACCTTCCTTTTGAATGAGCAGATTTGAAACTGTCTTTTTGTAGAATCTGCAAGTGGACATTTTGAGCGCCTGGAGGCCTATGGTGGAAAAGAAAATGGCTTCACATGAAAACTA TR:VR 62:4 29:0 chr3 142999404 r_214 G . PASS END=173620976;SVTYPE=DEL;SVLEN=-30621572 TR:VR 131:13 9:0 chr1 175463979 r_20 C . PASS END=175532647;SVTYPE=DEL;SVLEN=-68668 TR:VR 69:34 16:0 chr13 31123072 r_55_0 C [chr13:31269635[A . PASS SVTYPE=BND;MATEID=r_55_1 TR:VR 86:10 14:0 chr13 31269635 r_55_1 A [chr13:31123072[A . PASS SVTYPE=BND;MATEID=r_55_0 TR:VR 86:10 14:0 chr14 35948110 i_305 A . PASS END=35948110;SVTYPE=INS;SVINSLEN=963;SVINSSEQ=GTAATCACAGGCCGGAGGACACGGAGCTTAAATCTGGCACAGGCCGGAGGACACGGAGGGTAATCACAGGCCGGAGGACATGGAGAGAAATCACAGGCCGGAGGACACGGAGGGTAATCACAGGCCGGAGGACACGGAGGGTAATCACAGGCCGGAGGATATGGAGAGTAATCACAGGCCGGAGGAGGATATGGAGAGTAATCACAGGCCGGAGGACACGGAGAGAAATCACAGGCCGGAGGATATGGAGAGAAATCACAGGCCGGAGGATATGGAGAGTAATCACAGGCCGGAGGACACGGAGAGAAATCACAGGCCGGAGGACACGGAGAGAAATCACAGGCCGGAGGATATGGAGAGTAATCACAGGCCGGAGGATATGGAGAGTAATCACAGGCCGGAGGACACGGAGAGAAATCACAGGCCGGAGGATATGGAGAGAAATCACAGGCTGGAGGACACGGAGGGTAATCACAGGCCGGAGGATATGGAGAGTAATCACAGGCTGGAGGATATGCAGAGTAATCACAGGCTGGAGGATATGGAGAGAAATCACAGGCCGGAGGACACGGAGGTGGGTAACCGCAGGCCGGAGGACACGGAGAGAAATCACAGGCCGGAGGATATGGAGAGAAATCACAGGCCGGAGGACACGGAGGGTAATCACAGGCCGGAGGACACGGAGAGAAATCACAGGCCGGAGGATATGGAGAGAAATCACAGGCCGGAGGACACGGAGGGTAATCACAGGCCGGAGGACACGGAGGGTAATCACAGGCCGGAGGACATGGAGCGTAATCACAGGCTGGAGGACACGGAGAGAAATCACAGGCCGGAGGACACGGAGGGTAATCACAGGCCAGAGGACACGGAGAGGAGGATCACAGGCCGGAGGACACGGAGGGTAATCACAGGCCGGAGGACACGGAGGGTAATCAAGCGTGGCCGGAGGACACTAGAGCG TR:VR 107:6 10:0 chr2 60507316 i_566 G . PASS END=60507316;SVTYPE=INS;SVINSLEN=52;SVINSSEQ=GGGAGGGGAGGGGAGGGGAGGGGAGGGGAAGGGAAGGGAAGGGAAAGGGAAG TR:VR 37:8 9:0 chr3 143077105 r_215 T . PASS END=151249687;SVTYPE=DEL;SVLEN=-8172582 TR:VR 85:6 13:0 chr3 189767152 d_1132 A . PASS END=189769003;SVTYPE=DEL;SVLEN=-1851 TR:VR 26:5 10:0 chr8 1695513 i_1222 A . PASS END=1695513;SVTYPE=INS;SVINSLEN=133;SVINSSEQ=GAGGGGGCACAGCCTTACCCGGCCCTACAGAAAGAGGGGCACAGCCATGTCCGGCCCTACAGAAAGAGGGGGCACAGCCATGCCTGGCACTACAGAAAGAGGGGGCACAGCCATGCCCGGCCCCACAGGAAGG TR:VR 22:5 8:0 chr8 49627792 r_281_0 C C]chr8:50950601] . PASS SVTYPE=BND;MATEID=r_281_1 TR:VR 116:8 8:0 chr8 50950601 r_281_1 A A]chr8:49627792] . PASS SVTYPE=BND;MATEID=r_281_0 TR:VR 116:8 8:0 chr12 103630 i_223 G . PASS END=103630;SVTYPE=INS;SVINSLEN=526;SVINSSEQ=GGAGGCGGGGCTCAGGAGGGAGAGGTGGAGTTCGGTGGGGAGGCAGGGCCTCAGGGGTAGGTGGGGGCTCAGGAGGGGAGGCGGGGCTCAGGAGGGAGAGGTGGAGTTCGGGGGAGGCAGGGCTGGGGGGAGGTGGGGCTCAGGAGGGGGAGGCGGGGCTCAGGCAGGAGAGGTGGGACTCAGGTGGGGAGGCAGGACTCAGGAGGGAGAGGTGGAGTTCAGTGGGGAGGCAGGGCTCAGGGGGAGGTGGGGGCTCAGGAGGGGAGGTGGGGCTCAGGAGGGAGAGGTGGAGTTCAGGGGGGAGGTGGGACTCAGGAGGGAGAGGTGGAGTTCGGTGGGGAGGCAGGGCTCAGGGGTAGGTGGGGGCTCAGGAGGGGAGGCGGGGCTCAGGAGGGAGAGGTGGAGTTCGGTGGGGAGGCGGGGCTCAGGAGGGAGAGGTGGAGTTCGGGTGGGGAGGCAGGGCTCAGGAGGGAGAGGTGGAGTTCAGGGGGAGGCGGGGCTCAGGAGGGAGAGGTGGAGTTCGGTG TR:VR 28:8 3:0 chr13 31123327 r_56_0 G G[chr21:10415551[ . Too_low_VAF SVTYPE=BND;MATEID=r_56_1 TR:VR 170:8 55:0 chr21 10415551 r_56_1 C ]chr13:31123327]C . Too_low_VAF SVTYPE=BND;MATEID=r_56_0 TR:VR 170:8 55:0 chr3 143543061 r_216_0 A A]chr3:149769928] . PASS SVTYPE=BND;MATEID=r_216_1 TR:VR 130:23 12:0 chr3 149769928 r_216_1 A A]chr3:143543061] . PASS SVTYPE=BND;MATEID=r_216_0 TR:VR 130:23 12:0 chr7 155350213 i_1207 G . PASS END=155350214;SVTYPE=INS;SVINSLEN=780;SVINSSEQ=GTCTCCCCGGCCGGCCTCCCCTCCCGGCTTCCTGCGGTCTCCCCGGGCCGGCCTCCCCTCCCGGCTTCCTGAGGTCTCCCCGGCCGGCCTCCCTCCCGGCTTCCTGAGGTCTCCCCGGCCGGCCTCCCCTCCCGGCTTCCTGAGGTCTCCCCGGCCGGCCTCCCTCCCGGCTTCCTGCGGTCTCCCCGGCCGGCCTCCCCTCCCCGGCTTCCTGCGGTCTCCCCGGCCGGCCTCCCCTCCCGGCTTCCTGCGGTCTCCCCGGCCGGCCTCCCCCTCCCCGGCTTCCTGAGGTCTCCCCGGCCGGCCTCCCCTCCCGGCTTCCTGCGGTCTCCCGGGCCGGCCTCCCCTCCCGGCTTCCTGCGGTCTCCCCGGCCGGCCTCCCCTCCCGGCTTCCTGCGGTCTCCCCGGCCGGCCTCCCCTCCCGACTTCCTGAGGTCTCCCCGGCCGGCCTCCCCTCCCGGCTTCCTGCGGTCTCCCCGGCCGGCCTCCCCTCCCGGCTTCCTGCGGTCTCCCCGGCCGGCCTCCCCTCCGGCTTCCTGCGGTCTCCCCGGCCGGCCTCCCCTCCCGGCTTCCTGCGGTCTCCCCGGCCGGCCTCCCCCTCCCGGCTTCCTGCGGTCTCCCCGGCCGGCCTCCCCCTCCCGGCTTCCTGCGGTCTCCCCGGCCGGCCTCCCCTCCCCCCGGCTTCCTGCGGGTCTCCCGGGCCGGCCTCCCCTCCCGGCTTCCTGAGGTCTCCCCGGCCGGCCTCCCCTCCGGCTTCCTGCGGTCTCCCGGGCCGGCCTC TR:VR 24:6 3:0 chr8 50922589 r_282_0 G [chr8:50960263[T . PASS SVTYPE=BND;MATEID=r_282_1 TR:VR 93:5 9:0 chr8 50960263 r_282_1 T [chr8:50922589[T . PASS SVTYPE=BND;MATEID=r_282_0 TR:VR 93:5 9:0 chr13 31123823 r_57_0 T ]chr7:152404966]T . Too_low_VAF SVTYPE=BND;MATEID=r_57_1 TR:VR 169:7 69:0 chr7 152404966 r_57_1 T T[chr13:31123823[ . Too_low_VAF SVTYPE=BND;MATEID=r_57_0 TR:VR 169:7 69:0 chr20 30621110 i_749 A . PASS END=30621119;SVTYPE=INS;SVINSLEN=187;SVINSSEQ=AGAGGCAGACCACAGGCCGTCTTGAGGAGGACTTTATGTTCAAGTGCAGAAAGCAGGCAGGATTACCACCCTGGGTACTCGCCCTTCTGTGGCCCACAGTGCCATATGAGCCCTGAGGCATGGACTGGTGCCATCTGCTTCATACAAAAATTAACTTAAGATGGATTAAATAGTTAAATATACCACC TR:VR 49:7 6:0 chr3 143686370 r_217_0 A A]chr3:146595545] . PASS SVTYPE=BND;MATEID=r_217_1 TR:VR 112:8 14:0 chr3 146595545 r_217_1 C C]chr3:143686370] . PASS SVTYPE=BND;MATEID=r_217_0 TR:VR 112:8 14:0 chr4 189491307 i_1013 A . PASS END=189491307;SVTYPE=INS;SVINSLEN=336;SVINSSEQ=CCCTCGATGGTGGGTGGGCTGTGGCTGACCCTCACCGGTGTGGGTGGGCTGTGGCTGACCCTCACTGGTGTGGGTGGGCTGTGGCTTTGACCCTCGGTGGTGTGGGTGGGCTGTGGCTGACCCTCACTGGTGTGGGTGGGCTGTGGCCGGACCCTCGATGGTGTGGGTGGGCTGTGGCTGACCCTCACTGGTGTGGGTGGGCTGTGTATGACCCTCGGTGGTGCAGGTGGGCTGTGGCTGACCCTCGGTGGTGTAGGTGAGCTGTGGCTGACCCTCACTGGTGTAGCTGGGCTGAAGGCTGGACCCCACCGGTGTGTGGGTGGGCTGTGGCTGGCC TR:VR 47:5 12:0 chr9 137436339 d_1518 G . PASS END=137436391;SVTYPE=DEL;SVLEN=-52 TR:VR 35:13 1:0 chr13 31297211 r_58_0 T T[chr7:152401682[ . PASS SVTYPE=BND;MATEID=r_58_1 TR:VR 138:10 53:0 chr7 152401682 r_58_1 C ]chr13:31297211]C . PASS SVTYPE=BND;MATEID=r_58_0 TR:VR 138:10 53:0 chr15 20341932 d_577 G . PASS END=20342577;SVTYPE=DEL;SVLEN=-645;SVINSLEN=13;SVINSSEQ=CCAAGGAAGCCAG TR:VR 146:14 65:0 chr3 144077325 r_218 C . PASS END=146924843;SVTYPE=DUP;SVLEN=2847518 TR:VR 118:7 16:0 chr8 64232478 i_1254 G . PASS END=64232478;SVTYPE=INS;SVINSLEN=157;SVINSSEQ=TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATACTGTATATATATATATACTGTGTGTATATATACTGTATATATATACTATATAT TR:VR 46:10 8:0 chr9 137502693 i_1331 G . PASS END=137502693;SVTYPE=INS;SVINSLEN=405;SVINSSEQ=CGGGGGGACGGGGGGGGGGACGGGGGGGACGCGGGGGACGGGGGGGACGGGGGGGGGGGGACGGGGGGACGGGGGGACGGGGGGGACGGGGGGGACGGGGGGGACGGGGGGGACGGGGGGACGGGGGGGACGGGGGGACGGGGGGACGGGGGGGACGGGGGGGGGACGGGGGGGACGCGGGGGGACGGGGGGGACGGGGGGGACGGGGGGGGACGGGGGGGACGCGGGGGACGGGGGGACGGGGGGGACGGGGGGGACGGGGGGGACGGGGGGGACGGGGGGGACGGGGGGGACGGGGGGGACGGGGGGGGGACGGGGGGACGCGGGGGGACGGGGGGGACGGGGGGGACGGGGGGACGGGGGGGGGGGGGGGGACGGGGGGGACGGGGGGGACGCGGGGGACGG TR:VR 41:40 1:0 chrX 667810 i_1380 A . PASS END=667810;SVTYPE=INS;SVINSLEN=536;SVINSSEQ=ACCTACCCCAGCTTCTCTCTCTCTCTCTCTCCCCTCTCTCTCTCTCTGTCTCTCTCTCTCTCTTTCCTTTCTGTCTCTCTCCCCTCTCTGTCTCTCTCTCTGCCTTTCTGTCTCCTCTCTCTCTCTCCTTTCTGTCTCTCTCTCCCTCTCTCTCTGTCTCTCTCCTCTGTCTCTCTACTCTCACTCCTCTCTCTCTCCATCTCTCTCTCTCTCCTTTCTCTCTGCTCTCTCTCTCTCTCTCTCTCCTGTCTCTCTCCTTGGTCTCTCTCCTCTCTGTCTCTCTCTTTCTCCTCTCTCTCTCTTTTATCTCTCTCCTATGTCTCTCTCCTCTCTGTCTCTCTCTCCTCTCTCTCTCTCCTCTCTGTCTTTCCTCTCTCTGTTTCTCTGTCTCCTTTCTCTCTCTCCTCTCTCTGCCCCTCTCTCTCTCTCTCCCATCCCCTCCCCCCCCCCTCCCCCTCCCCTCCCCTCCCCTCCCCTCCTCCCCTCCCCTCCTCCCCTCCTCCCCTCCCCTCCTCTCCTCCCCTCCTCCCCTCCCC TR:VR 37:9 4:0 chr13 31332965 r_59 T . PASS END=35036652;SVTYPE=DEL;SVLEN=-3703687 TR:VR 60:9 8:0 chr14 38156166 r_88_0 T T]chr14:38156265] . PASS SVTYPE=BND;MATEID=r_88_1 TR:VR 26:6 6:0 chr14 38156265 r_88_1 A A]chr14:38156166] . PASS SVTYPE=BND;MATEID=r_88_0 TR:VR 26:6 6:0 chr16 35890306 r_101 A . PASS END=35915149;SVTYPE=DUP;SVLEN=24843 TR:VR 68:10 17:0 chr17_KI270730v1_random 70196 i_457 G . PASS END=70196;SVTYPE=INS;SVINSLEN=121;SVINSSEQ=ACTCAAATGGAACAGGCTCGAATGGAATATAATAGAATGGAATGGCATCGAACTGAATGGAACGGAAGAGAGTGTAATGGAAAGATAGCAAAAGAAATGGAATGTAATGGAATGGACTCAA TR:VR 39:4 4:0 chr22 49029652 r_167_0 C [chr4:185239770[T . PASS SVTYPE=BND;MATEID=r_167_1 TR:VR 52:4 6:0 chr4 185239770 r_167_1 T [chr22:49029652[T . PASS SVTYPE=BND;MATEID=r_167_0 TR:VR 52:4 6:0 chr3 145120819 r_219 T . PASS END=146004719;SVTYPE=DUP;SVLEN=883900 TR:VR 124:11 13:0 chr5 178095471 d_1288 A . PASS END=178096511;SVTYPE=DEL;SVLEN=-1040;SVINSLEN=94;SVINSSEQ=CGTCAGTCCTCCCTCCTCAGTGGCCACTCTTCAGATGGATTCACGTCAGTCCTCCCTCCTCAGTGGCCACTCTTCAGATGGCTTCATGTCGGTT TR:VR 32:20 3:0 chr7 156154184 d_1401 T . PASS END=156155137;SVTYPE=DEL;SVLEN=-953;SVINSLEN=22;SVINSSEQ=AGAACAAGTGGGGACGTCACGG TR:VR 32:3 6:0 chr8 35146177 r_273 T . PASS END=44161416;SVTYPE=DUP;SVLEN=9015239 TR:VR 232:24 28:0 chr13 32117086 r_60_0 T T[chr9:89869205[ . PASS SVTYPE=BND;MATEID=r_60_1 TR:VR 45:3 10:0 chr9 89869205 r_60_1 C ]chr13:32117086]C . PASS SVTYPE=BND;MATEID=r_60_0 TR:VR 45:3 10:0 chr16 35910893 r_102_0 A [chr16:35920195[T . PASS SVTYPE=BND;MATEID=r_102_1 TR:VR 53:7 12:0 chr16 35920195 r_102_1 T [chr16:35910893[T . PASS SVTYPE=BND;MATEID=r_102_0 TR:VR 53:7 12:0 chr20 62213060 i_776 G . PASS END=62213060;SVTYPE=INS;SVINSLEN=408;SVINSSEQ=AAGAGGAGAGCGGGGATGGGGGGTAAGGAGGGCGGGGATGGGTGGGGAAGGAGAGCGGGGATGGGGGAGGGAGAGCGAGGGGGATGGGGGAAGGGAGAGCAGGGATGGGGGGAAGGAGGAGAGTGGGGATGGGTGGGGGGAAGGAGGAGAGCGGGGATTGGGGAGGGAGGAGCGGGGATGGGGGAAGGGAGAGCAGGGATGGGGGGTAAGGAGAGCGGGGATGGGGGGTAAGGGAGGCGGGGATGGGGGAGGGAGAGCAGGGGGATGGGGGGAAGGGAGAGCAGGGATCGGGGGGAAGGAGAGTGGGGATGGGGGGTAAGGAGAGCGGGGATGGGTGGGGGAAGGAGAGCGGGGATTTGGGGAGGGAGGAGCGGGGGATGGGGGAAGGGAGAGCAGGGATGGGGGGTA TR:VR 45:7 11:0 chr3 145150832 r_220 T . PASS END=146004750;SVTYPE=DEL;SVLEN=-853918 TR:VR 115:23 19:0 chr8 1013838 d_1414 G . PASS END=1015363;SVTYPE=DEL;SVLEN=-1525;SVINSLEN=82;SVINSSEQ=TGACCAGGACAGACGACGCCTCCACTGTGTGTGACCAGGACAGACGACGCCTCCACTGTGTGTGACCAGGACAGACGATGCC TR:VR 15:11 4:0 chr8 35180752 r_274 A . PASS END=37577134;SVTYPE=DEL;SVLEN=-2396382 TR:VR 137:59 11:0 chr17 34680029 r_111_0 T [chr17:41144158[T . Too_low_VAF SVTYPE=BND;MATEID=r_111_1 TR:VR 67:3 13:0 chr17 41144158 r_111_1 T [chr17:34680029[T . Too_low_VAF SVTYPE=BND;MATEID=r_111_0 TR:VR 67:3 13:0 chr2 184881341 d_927 G . Too_small_size END=184881378;SVTYPE=DEL;SVLEN=-37 TR:VR 28:10 4:0 chr4 189652027 i_1017 A . PASS END=189652027;SVTYPE=INS;SVINSLEN=1192;SVINSSEQ=CGGAGATGGTAACACCAGTGGAATAAGGGTGGAGGGTGGGGTCACGGAGATGGTAACACCAGTGGAATAAGGGTGGAGGGTGGGGTCACGGAGATGGTAACACCAGTGGAATAAGGGTGGAGGGTGGGGTCATGGAGATGGTAACACCAGTGGAATAAGGGTGGAGGGTGGGGTCATGGAGATGGAAACACCAGTGGAATAAGGGTGGAGGGTGGGGTCATGGAGATGGAAACACCAGTGGAATAAGGGTGGAGGGTGGGGTCATGGAGATGGTAACACCAGTGGAATAAGGGTGGAGGGTGGGGTCATGGAGATGGTAACACCAGTGGAATAAGGGTGGAGGGTGGGGTCACGGAGATGGTAACACCAGTGGAATAAGGGTGGAGGGTGGGGTCACGGAGATGGTAACACCAGTGGAATAAGGGTGGAGGGTGGGGTCGTGGAGATGGTAACACCAGTGGAATAAGGGTGGAGGGTGGGGTCATGGAGATGGTAACACCAGTGGAATAAGGGTGGAGGGTGGGGTCGTGGAGATGGTAACACCAGTGGAATAAGGGTGGAGGGTGGGGCCATGGAGATGGTAACACCAGTGGAATAAGGGGTGGAGGGTGGGGTCGTGGAGATGGTAACACCAGTGGAATAAGGGTGGAGGGTGGGGTCACGGAGATGGTAACACCAGTGGAATAAGGGTGGAGGGTGGGGTCACGGAGATGGTAACACCAGTGGAATAAGGGTGGAGGGTGGGGTCACGGAGATGGTAACACCAGTGGAATAAGGGTGGAGGGTGGGGTCATGGAGATGGTAACACCAGTGGAATAAGGGTGGAGGGTGGGGTCACGGAGATGGTAACACCAGTGGAATAAGGGTGGAGGGTGGGGTCATGGAGATGGTAACACCAGTGGAATAAGGGTGGAGGGTGGGGTCACGGAGATGGAAACACCAGTGGAATAAGGGTGGAGGGTGGGGTCATGGAGATGGAAACACCAGTGGAATAAGGGTGGAGAAGGTGGGGTCGTGGAGATGGAAACACCAGTGGAATAAGGGTGGAGGGTGGGGTCACGGAGATGGTAACACCAGTGGAATAAGGGTGGAGGGTGGGGTCACGGAGATGGTAACACCAGTGGAATAAGGGTGGAGGGTGGGGTCACGGAGATGGTAACACCAGTGGAATAAGGGTGGAGGGTGGGGTCGT TR:VR 37:5 6:0 chr8 103098939 d_1458 C . PASS END=103103172;SVTYPE=DEL;SVLEN=-4233 TR:VR 70:11 13:0 chr8 676328 d_1409 G . PASS END=676310;SVTYPE=INS;SVINSLEN=89;SVINSSEQ=GCCCCTCGTGAGGACAGAGGCGCGGCGGCCCTCGTGAGGACAGAGACGCGGCGCCCCTCGGCGAGGACAGAGACGCGGCGGCCCCTCGT TR:VR 12:6 2:0 chr9 137534169 i_1334 A . PASS END=137534169;SVTYPE=INS;SVINSLEN=87;SVINSSEQ=GGACTCCCAGAATCCTCCACAACAGTGTCCACTCCAGGCGGGAGGACTCCCAGAATCCTCCACAACAGTGTCCACTCAGGAGGGAGG TR:VR 36:14 4:0 chr1 80607038 d_22 G . PASS END=80607096;SVTYPE=DEL;SVLEN=-58 TR:VR 14:8 6:0 chr13 34042974 r_62 C . PASS END=35039447;SVTYPE=DUP;SVLEN=996473 TR:VR 50:10 14:0 chr2 83340846 r_142_0 A [chr9:94312709[A . PASS SVTYPE=BND;MATEID=r_142_1 TR:VR 70:7 16:0 chr9 94312709 r_142_1 A [chr2:83340846[A . PASS SVTYPE=BND;MATEID=r_142_0 TR:VR 70:7 16:0 chr3 146031996 r_221_0 A A]chr3:179107137] . PASS SVTYPE=BND;MATEID=r_221_1 TR:VR 153:35 14:0 chr3 179107137 r_221_1 G G]chr3:146031996] . PASS SVTYPE=BND;MATEID=r_221_0 TR:VR 153:35 14:0 chr4 53710893 i_967 T . Too_small_size END=53710893;SVTYPE=INS;SVINSLEN=44;SVINSSEQ=CATGTATTGACTGACTGATGAAAATGTTATGACCAGAGGCTCAC TR:VR 21:9 8:0 chrX 72840188 i_1403 C . PASS END=72840188;SVTYPE=INS;SVINSLEN=316;SVINSSEQ=AAAGCAAAGCAAAGCTAAAACAAAGCAAAAGCAAAGCAAAAGCAAAGCAAAGCAAAAGCAAAGCAAAGCAAAAGCAAAAGCAAAGCAAAGCAAAGCAAAGCAAAAGCAAAAGCAAAAGCAAAAGCAAAAGCAAAAACAAAAGCAAAGCAAAGCAAAGCAAAAGCAAAAGCAAAAGCAAAAGCAAAGCAAAGCAAAAGCAAAGCAAAGCAAAGCAAAGCAAAGCAAAAGCAAAAGCAAAGCAAAGCAAAAGCAAAAGCAAAAGCAAAAGCAAAGCAAAGCAAAAGCAAAAGCAAAGCAAAAGCAAAAGCAAAAGCAA TR:VR 12:6 8:0 chr15 22455248 d_579 G . PASS END=22455295;SVTYPE=DEL;SVLEN=-47 TR:VR 30:8 12:0 chr17 35886590 i_433 A . PASS END=35886620;SVTYPE=INS;SVINSLEN=156;SVINSSEQ=AACCCAAACAGAAAAACAACAAACCCACATATGTATGTAGTACACACACACATTCGGAAACACATTTAAATCTATACCTTTTTATCTACCTTGAAAACCATGAATCCATCTTAACATTTCAAAGTTCATTCTGATTTTCTCCTGTTTCATGTTTGT TR:VR 39:4 6:0 chr22 49539961 i_852 T . PASS END=49539964;SVTYPE=INS;SVINSLEN=418;SVINSSEQ=TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATGGAAAAACTTATTTAATCCAGTAATAAACCTTTATATTTTCTCATCAGTTTAATAATAACATTTTTTGCCAGTAATTGGGTATATTTTGGGAAATAGTAGAATAAAGATTTGTAGACTCTCTTACATCTCCTAAAAGAAAATTCACTAAGCATGTATGTGGAAAACATCTTAAAATAAAGATAGATAAGAACGTTTTTGTGAATTAAAAAAGTAATGTGAACATGTTAAGGTATTTGAACTTACATTTAAATTGGATTATAAGTAACTTAACATTTTTAATGCAAGCATATTAACCTTCTTGTGCTTATGAGATTATTTTGCCAAATTGTAGGACAGAGGAAACTGCTGACTCCACAAAGG TR:VR 16:14 10:0 chr3 146497958 r_222_0 G ]chr4:190114928]T . PASS SVTYPE=BND;MATEID=r_222_1 TR:VR 120:7 36:0 chr4 190114928 r_222_1 T T[chr3:146497958[ . PASS SVTYPE=BND;MATEID=r_222_0 TR:VR 120:7 36:0 chr8 35849464 r_276_0 A [chr8:35850747[TATTATTAT . PASS SVTYPE=BND;MATEID=r_276_1;SVINSLEN=8;SVINSSEQ=TATTATTA TR:VR 63:43 7:0 chr8 35850747 r_276_1 T [chr8:35849464[TAATAATAT . PASS SVTYPE=BND;MATEID=r_276_0;SVINSLEN=8;SVINSSEQ=TAATAATA TR:VR 63:43 7:0 chrUn_KI270442v1 205460 i_1357 A . PASS END=205460;SVTYPE=INS;SVINSLEN=203;SVINSSEQ=AAAACTGTTTCCAAACTGCTTCATCAAAAGAAAGGTTCAACTCTTTGAGATCAATGCACACATAAAAAATTAGTTTCTCAGAATGCTTCTGTCAACTTTTTATGTGAAGATATTACTTTTTCACCATAGGTCTCAAACCGTAAACAAATATTCCTTTGCAGATTGCACAAAAAGTATGCTTCCACACTGCTCAATAAACAGAA TR:VR 49:5 19:0 chrX 144403050 d_1614 A . PASS END=144405207;SVTYPE=DEL;SVLEN=-2157 TR:VR 24:6 9:0 chr1 85933338 r_4_0 A AAAAAAAAAAAAAAAAAAAAAA]chr9:97913268] . PASS SVTYPE=BND;MATEID=r_4_1;SVINSLEN=21;SVINSSEQ=AAAAAAAAAAAAAAAAAAAAA TR:VR 55:3 18:0 chr9 97913268 r_4_1 T TTTTTTTTTTTTTTTTTTTTTT]chr1:85933338] . PASS SVTYPE=BND;MATEID=r_4_0;SVINSLEN=21;SVINSSEQ=TTTTTTTTTTTTTTTTTTTTT TR:VR 55:3 18:0 chr11 20838521 r_38_0 T [chr17:14272682[A . PASS SVTYPE=BND;MATEID=r_38_1 TR:VR 70:9 19:0 chr17 14272682 r_38_1 A [chr11:20838521[A . PASS SVTYPE=BND;MATEID=r_38_0 TR:VR 70:9 19:0 chr12 37742973 i_241 T . PASS END=37742973;SVTYPE=INS;SVINSLEN=174;SVINSSEQ=TTTTTTTGTGATTGAGCAGTTTGGAAACAGTCTTTTTGTATAATCTTCCCTGGGATATTTGTGAGCCCATTAAGGCCTATGGTGGAAAAGGAAATATCTTCACATAAAAACTAGACAGAAGCTTTCTGAGAAATTTCTTTCTGATGTGTGCATTCATATGACAGAGTTGCACCT TR:VR 34:3 10:0 chr14_GL000225v1_random 54881 d_509 A . Too_low_VAF END=54907;SVTYPE=INS;SVINSLEN=26;SVINSSEQ=GAAGGTTTGCATTATTTGGGTGATCA TR:VR 482:4 154:1 chr17 36446544 r_112 G . PASS END=36459256;SVTYPE=DEL;SVLEN=-12712 TR:VR 42:6 6:0 chr17_KI270730v1_random 93316 i_459 G . Too_small_size END=93316;SVTYPE=INS;SVINSLEN=26;SVINSSEQ=GAATACAATGGAATGGAATGGAATAG TR:VR 98:5 36:0 chr21 7944683 i_799 A . PASS END=7944686;SVTYPE=INS;SVINSLEN=219;SVINSSEQ=TGCCTCTCCATTCCATTGCACTCCACTCCATTCCATTCCATTCTACTGCATTCCATTCCACTCTTTCATTTCGATTGGGTCTAACTCTGTTACCCAGACAGAATTCAGTGGCACAATCTTAGCTCACATTTCATTTCACACTTCGTTCCATTCCATTCCATTTCTTTCCACTCCACTCCAGTCCACTCAACTCCACTGCACTCCAATCAACTCTATTCC TR:VR 173:23 45:1 chr3 146595552 r_223_0 G [chr3:146932067[G . Too_low_VAF SVTYPE=BND;MATEID=r_223_1 TR:VR 114:3 14:0 chr3 146932067 r_223_1 G [chr3:146595552[G . Too_low_VAF SVTYPE=BND;MATEID=r_223_0 TR:VR 114:3 14:0 chr8 113044263 r_285 T . PASS END=113046543;SVTYPE=DEL;SVLEN=-2280 TR:VR 64:51 3:0 chr8 35989140 d_1421 C . PASS END=35997584;SVTYPE=DEL;SVLEN=-8444 TR:VR 81:6 14:0 chr1 181734819 i_54 T . PASS END=181734819;SVTYPE=INS;SVINSLEN=77;SVINSSEQ=ATCCTTGTCCCTGACCCCACACCCCATCCCTGCCCTGACCCCACACCTCATCCCTGCATTATGAATTCCACACCCCA TR:VR 41:4 1:0 chr11 23861053 r_39_0 T ]chr5:44672813]T . PASS SVTYPE=BND;MATEID=r_39_1 TR:VR 88:22 18:0 chr5 44672813 r_39_1 T T[chr11:23861053[ . PASS SVTYPE=BND;MATEID=r_39_0 TR:VR 88:22 18:0 chr18 10240 d_742 C . Too_small_size END=10215;SVTYPE=INS;SVINSLEN=30;SVINSSEQ=AACCCCAACCCCAACCCTAACCCTAACCCC TR:VR 56:4 6:0 chr2 87409323 d_820 A . PASS END=87409349;SVTYPE=INS;SVINSLEN=62;SVINSSEQ=AGCCACCCAGCCAGCCAAGCCCGCCAGCCAAACCAGCCGGCCAAGCCAGCCAAGCCAGCCAA TR:VR 97:8 8:0 chr3 146607925 r_224_0 T T]chr3:150832035] . PASS SVTYPE=BND;MATEID=r_224_1 TR:VR 86:7 7:0 chr3 150832035 r_224_1 T T]chr3:146607925] . PASS SVTYPE=BND;MATEID=r_224_0 TR:VR 86:7 7:0 chr4 137490031 d_1188 A . PASS END=137491954;SVTYPE=DEL;SVLEN=-1923 TR:VR 41:7 9:0 chr8 36663317 r_277_0 T T]chr8:36666861] . PASS SVTYPE=BND;MATEID=r_277_1 TR:VR 86:62 10:0 chr8 36666861 r_277_1 A A]chr8:36663317] . PASS SVTYPE=BND;MATEID=r_277_0 TR:VR 86:62 10:0 chr11 24125749 r_40_0 C C]chr17:14567504] . PASS SVTYPE=BND;MATEID=r_40_1 TR:VR 83:18 16:0 chr17 14567504 r_40_1 T T]chr11:24125749] . PASS SVTYPE=BND;MATEID=r_40_0 TR:VR 83:18 16:0 chr2 90386805 i_604 C . Too_low_VAF END=90386805;SVTYPE=INS;SVINSLEN=506;SVINSSEQ=AAATGGCATCGAATGGAATCACCATCGAATGGAATCAAATGGAATCACCATCGAATGTAATGTTATGAAATCATCTCATGGACTCGAAGGGAATCACCATCGAATGGAATCGAATGGAATCATTGAATGGACTCAAATGGAATAATCGAATGGGCTAGAGTGGAATCATCATCAAATGGAATCGAATGGAATCATCAAATGGACTCGAATGGAATCATCGTCAAATGGAATCGAATGGAATCATCATCAAATGGAATCGAATGGAATCCTCATCGAATGGAATCGAACGGAAGCATCATCGAATGGAATCACCAAATTGAATCGAATGGAATGATGGTCAGAGACAATCGAAGGGAAACATCGAACGGGATTGAACGGAGTCATCGAATGGAATCGATAGGAATCATCGAATGGATTCAAATGGAATCATCATCGAATGGAAACGAACGGAATCATCGAATGGACACGAATGGAATCATCATCAAATAGGGTTTAATGGAATCATC TR:VR 512:5 129:1 chr21 7948404 i_800 T . PASS END=7948416;SVTYPE=INS;SVINSLEN=249;SVINSSEQ=CCACTCGAATGCATTCTATTCAATGACATTCCACTCCATTTCACTCTACTCCACTGTACTGCACTCCACTCCACTATATTCCATTCCACTCTGTTCCATTTCACTGAACTCCGATCCACTGCACTGAACTCCACTCCACTCTTACACAGATCAATTCCATTCCATTACTTTTCACTCCATTCCATTCCACTCCACTAAAGTCCACCCTACTCCATTTCACTCTATTCCATTCCATTCCACTTCCATCCA TR:VR 214:28 69:1 chr7 157746828 i_1210 T . PASS END=157746828;SVTYPE=INS;SVINSLEN=849;SVINSSEQ=TGGCCTGCATCCCTAGGCCTAGGTCAGTTGGGCACAGCACTTGAGGCACTGTGTCCCTGAGCTGTGAGCCATGTGTTGAGGTGAGTTCCCGAGGCCTTCCTGCGTCCCCGAGCTCTGGGCTGTCCTCGGTGGATTCACTGAGCCACAGCGCCTCAGCTGCCAGGCTGTTGGGAGCAGATTCCTGAGGCCTCTGTCCCTGAGCTGTGGGCTGCTTGAGGTGGATTCTGAGGCCTGCGTCCCTGAGCTGTGGGGTGTCCGGGTGATTCTGAGGCCTGCATCTCTGAGCTGTGGGCTGTTGAGGCGATTCTGAGGCCTGTGTCCCTGAGCTGTGGGCTGTTGAGGTGATTCTGAGGCCTGCGTCCCTGAGCTCGCTGGGGTGTCCGGGTGATTCCTGAGGCCTGCGTCCCTGAGCTGTGGGCTGTTGAGGTGATTCTGAGGCCTGCGTCTCTGAGCTGTGGGGTGTCCGGGTGATTCTGAGGCCTGCGTCTCTGAGCTGTGGGGTGTCCGGGTGATTCTGAGGCCTGCGTCCCTGAGCTGTGGGGTGTCCGGGTGATTCTGAGGCCTGCGTCCCTGAGCTGTGGGCTGGAGGAGGTGATTCTGAGGCCTGCGTCCCTGAGCTTTGGGCAGTGTCCGGGTGATTCTGAGGCCTGCGTCCCTGAGCTGTGGGTGTCCGCGTGATTCTGAGGCCTGCGTCCCTGAGCTGTGGGGTGTGCGGGTGATTCTGAGGCCTGCGTCCCTGAGCTGTCAGGCTGTTGAGGTGATTCTGAGGCCTGCGCTCTCTGAGCTGCAAGGTGTCCGGGTGATTCCTGAGGCCTGCGTCTCTGAGCTGTGGGGTGTGCGGGTGATTCT TR:VR 26:6 5:0 chr1 182721045 i_56 A . PASS END=182721048;SVTYPE=INS;SVINSLEN=68;SVINSSEQ=TACACATATATATGTGTGTATATATACATATATACACATATATATGTGTGTATATATACATATATACA TR:VR 51:42 2:0 chr11 25125529 r_41 G . PASS END=27956632;SVTYPE=DEL;SVLEN=-2831103 TR:VR 50:21 15:0 chr18 11193264 d_745 G . PASS END=11193759;SVTYPE=DEL;SVLEN=-495 TR:VR 13:7 7:0 chr3 146678409 i_892 T . PASS END=146678409;SVTYPE=INS;SVINSLEN=83;SVINSSEQ=CCAACAATAATGGATTCTTATTTTCTTCCTCTTTCTAAATCAGAAAATTTTCTGCCGAAAAATATCTGCCTACAGCCGCTTCC TR:VR 55:13 5:0 chr18 14288255 i_462 G . PASS END=14288307;SVTYPE=INS;SVINSLEN=621;SVINSSEQ=GTGGGGCCTGGGGGAGATGATTTAATCATGGATTGGAGGTGGTTGGGGGTGGAAGGAAAAGGGTTGTAACCGAGTGAGTTGTAGAGAAACGCCACACTATGAGACGAATTCAGGGGACATTTATTGCCGGCAACTGAGAGACCACTAGTGCTCAAAATTCTCTTGGCCCGGAAGAAGAGGCTAGATTTTCTTTTATACTTTGGTTTAGAAAGGGGGGAGGTGGAGCCTAGCTGAAGGACTCTCACAGCAGCAAAACAGGCAAAAAAGTTAAAAAGATAAATGGCTACAGGAAAGCAAACAGTTCCAGGTTCAGGGGCTTTAAATCCATCAAAAGGTGAGAGATGTGGGGGCTTTGGATGCTGTCAACTGGACACAAATGCAGGGGTTTTTGGTACTATCAACCGGGCCAATTCCTGGGAACTGTGGATATAGCTTGCCAGAGTATCTTGTCAGTAATTGAATTCTTTGATGTGCTGGGATTCAGCTTGCACAAGTTAAGTCGTTGAGGAAGGGGGTGGGTAAGGGGCTGCAAGTGAAGGAGTCAAGATGGAGTCTGTCTGGCCCTCTCAGTTAAGGGAGAGTCAACCAGGTTGAAACAAGGTAGGGTATCACAAATGGGTT TR:VR 9:4 1:0 chr3 197323609 r_241 C . PASS END=197330181;SVTYPE=DEL;SVLEN=-6572;SVINSLEN=2;SVINSSEQ=TG TR:VR 32:21 7:0 chr4 69762228 d_1179 G . PASS END=69762372;SVTYPE=DEL;SVLEN=-144;SVINSLEN=45;SVINSSEQ=AGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGG TR:VR 21:8 3:0 chr3 146921825 r_225_0 G [chr3:148237528[A . PASS SVTYPE=BND;MATEID=r_225_1 TR:VR 131:7 13:0 chr3 148237528 r_225_1 A [chr3:146921825[A . PASS SVTYPE=BND;MATEID=r_225_0 TR:VR 131:7 13:0 chr4 144084733 d_1189 A . PASS END=144088571;SVTYPE=DEL;SVLEN=-3838 TR:VR 41:9 10:0 chr10 124507574 i_156 T . PASS END=124507574;SVTYPE=INS;SVINSLEN=1364;SVINSSEQ=GGGGGTAGGGAGGATTTCAGGTGTGGAGGGTAGACAGGATTTCAGGTAGACAGGATTTCAGGTGGGGGGGTAGGGAGGATTTCAGGTGTGGAGGGTAGACAGGATTTCAGGTGGGGGATAGGGAGTATTTGGTCAGGTGGGGGGGGTAGGGAGGATTTCAGGTGTGGGGGGTAGACAGGATTTCAGGTGGGGGGTAGGGAGGATTTCAGGTGTGGAGGGTAGACAGGATTTCAGGTGGTGGGGGTAGGGAGGATTTCAGGTGGGGAGTAGGCAGGATTTCAGGTCGGGGGGGTAGACAGGATTTCAGGTGGGGAGGTAGGGAGGATTTCAGGTGTGGAGGGTAGACAGGATTTCAGGTGGGGGTAGGGAGGATTTCAGGTGTGGAGGGTAGACAGGATTTCAGGTGGGGGGATAGGGAGTATTTCAGGTGGGGAGGGTAGGGGAGGGATTTCAGGTGTGTGGAGGGTAGACAGGATTTCAGGTGGGGGGATAGGGAGTATTTCAGGTGTGGAGGGTAGACAGGATTTCAGGTGTGGAGGGTAGACAGGATTTCAGGTGGGGGGATAGGGAGTATTTCAGGTGTGGAGGGTAGACAGGATTTCTCAGGTGTGGAGGGTAGACAGGATTTCAGGTGGGGGTAGGGAGGATTTCAGGTGTGGAGGGTAGACAGGATTTCAGGTGGGGGATAGGGAGTATTTCAGGTGGGGGGGTAGGGAGGGATTTCAGGTGTGGAGGGTAGACAGGATTTCAGGTGGGGGATAGGGAGTATTTCAGGTGGGGGGTAGGGAGGATTTCAGGTGTGGGGGGTAGACAGGATTTCAGGTGGGGGGGTAGGGAGGATTTCAGGTGTGGAGGGTAGACAGGATTTCAGGTGGGGGGGTAGGGAGGATTTCAGGTGTGGAGGGTAGACAGGATTTCAGGTGGGGGATAGGGAGGATTTCAGGTGGGGAGTAGGCAGGATTTCAGGTCGGGGGGTAGACAGGATTTCAGGTGGGGAGGTAGGGAGGATTTCAGGTGTGGAGGGTAGACAGGATTTCAGGTGGGGGGGTAGGGAGGATTTCAGGTGTGGAGGGTAGACAGATTTCAGGTGGGGGATAGGGAGTATTTCAGGTGGGGAGGGTAGGGAGGATTTCAGGTGTGGAGGGGTGACAGGATTTCAGGTGGGGGATAGGGAGGGATTTCAGGTGTGGGAGGGGTAGACAGGATTTCAGGTGGGGGATAGGGAGTATTTCAGGTGGGGAGGGTAGGGAGGATTTCCAGGTGTGGAGGGTAGACAGGGATTTCAGGTGGGGGGATAGGGAGTATTTCAGGTGGGGAGGGTAGGGAGGATTTCAGGTGTGGAGGGTAGACAGGATTTCAGGTGG TR:VR 32:3 7:0 chr3 147727431 r_226 G . Too_low_VAF END=149736415;SVTYPE=DEL;SVLEN=-2008984 TR:VR 123:6 12:0 chr4 149720307 d_1190 A . PASS END=149722030;SVTYPE=DEL;SVLEN=-1723;SVINSLEN=1;SVINSSEQ=A TR:VR 29:3 6:0 chr9 14003313 d_1489 T . PASS END=14003361;SVTYPE=DEL;SVLEN=-48 TR:VR 18:17 2:0 chr14_GL000225v1_random 59963 d_515 C . Too_low_VAF END=61423;SVTYPE=DEL;SVLEN=-1460;SVINSLEN=108;SVINSSEQ=AGGATCTGCCTACAGGATGCTTTCTGACATATCCCAGCAATGATCACCCAGGTGATGTACTACTTGTCAAAGCTCTGCCTACAGGGACATTGTGACGTATCTCTACAA TR:VR 452:3 122:1 chr17 45512138 r_113 A . PASS END=45520121;SVTYPE=DUP;SVLEN=7983;SVINSLEN=3;SVINSSEQ=TGG TR:VR 68:11 9:0 chr20 63607298 d_1032 T . PASS END=63607273;SVTYPE=INS;SVINSLEN=78;SVINSSEQ=GACCCACACCTCCATTTCTAGAAACATGCCCCTCTGACCTCACCTCCATTTCTAGAAACATGCCCCTGTGACCCCACA TR:VR 44:8 4:0 chr3 148173958 r_227_0 G [chr3:178892582[T . PASS SVTYPE=BND;MATEID=r_227_1 TR:VR 157:32 16:0 chr3 178892582 r_227_1 T [chr3:148173958[T . PASS SVTYPE=BND;MATEID=r_227_0 TR:VR 157:32 16:0 chr9 27591427 i_1291 C . PASS END=27591457;SVTYPE=INS;SVINSLEN=188;SVINSSEQ=ACTGGATGCTGAGATGCAAAAATCTATACACAAGATCAATGAAACCAAGTATTGGTTCTTCAAAAGAATAAATAAGACAGACCACCCTAGCTATATTAACAAAGAAAAAAAGGAGATCCAAATAAGTCCAATGAGAAATGACAATGATGATATTATAACTAATCCTACAGAAATCAAAAACTGCATGT TR:VR 24:7 5:0 chr1 245975942 d_225 T . PASS END=245976017;SVTYPE=DEL;SVLEN=-75;SVINSLEN=3;SVINSSEQ=CCG TR:VR 43:12 5:0 chr16 88501286 i_410 G . PASS END=88501286;SVTYPE=INS;SVINSLEN=308;SVINSSEQ=GGGCTCTCCCGCAGGTGCTGGTGATGATAGAGATAGCAGACATGGGTGCGTGGGCCATCCCGCAGGTGCTGGTGATGATGGAGATAGCAGACATGGATGCGGAGGCCCTCCCGCAGGTGCTGGTGATGATAGAGATAGCAGACATGGGTGCGGGGGCCCTCCCGCAGGTGCTGGTGATGATGGAGATAGCAGACATGGGTGCGTGGGCCCTCCCGCAGGTGCTGGTGATGATGGAGATAGCAGACATGGGTGCGTGGGCCATCCCGCAGGTGCTGGTGATGATGGAGATAGCAGACATGGATGCGGAG TR:VR 22:6 9:0 chr3 148176047 r_228_0 A A]chr3:172197878] . PASS SVTYPE=BND;MATEID=r_228_1 TR:VR 117:29 14:0 chr3 172197878 r_228_1 T T]chr3:148176047] . PASS SVTYPE=BND;MATEID=r_228_0 TR:VR 117:29 14:0 chr3 198102235 d_1140 G . PASS END=198102366;SVTYPE=DEL;SVLEN=-131;SVINSLEN=31;SVINSSEQ=ACGCATGCAAATTTGATCTCTGCTACGCGAT TR:VR 21:4 7:0 chr4 189836689 i_1027 C . PASS END=189836689;SVTYPE=INS;SVINSLEN=292;SVINSSEQ=CATCACCACCACATCACCACTGCACCAGTACACACACCATCACCACCACATCACCACTGCACTAGTACACACACCATCACCACCACATCACCACTGCACTAGCACACACACCACCACCACACATCACCACTGCACTAGTACACACACCACCATGCACACATCACCACTGCACTAGTACACACACCATCACCACCACATCACCACTGCACTAGTACACACACCATCACCACCACATCACCACATGCACTAGTACACACACCATCACCACCATCACCACTGCACCTATACACAC TR:VR 42:3 8:0 chr8 79568570 r_283_0 G G]chr8:108975602] . Too_low_VAF SVTYPE=BND;MATEID=r_283_1 TR:VR 108:5 6:0 chr8 108975602 r_283_1 T T]chr8:79568570] . Too_low_VAF SVTYPE=BND;MATEID=r_283_0 TR:VR 108:5 6:0 chr12 40044912 i_249 G . Too_small_size END=40044912;SVTYPE=INS;SVINSLEN=43;SVINSSEQ=TTATATAAACGCTTGAAAGCAGAACCATGAGGAAGAAAGGAAT TR:VR 24:9 10:0 chr15 57687249 i_352 A . PASS END=57687250;SVTYPE=INS;SVINSLEN=57;SVINSSEQ=TACATATATTATACACATATATGTATACAATATACACATATATGTATACAATATATA TR:VR 24:22 4:0 chr21 7960497 i_806 T . PASS END=7960497;SVTYPE=INS;SVINSLEN=382;SVINSSEQ=TCATTTCACAGAGTTGAACCATTCTTTTGATTGAGAAGTTTGGAAACAGTCTTTCTGGAGAATCTGCAAAGGGATATTTTGAGCTCTTTGGTAGGCATGGTGAAAAGGGAAATATCGTCACATAAAAAGTGGACAGAAGCTTTTGGAGAAACTTCTTTGTGATGTGTGCATTCATCTCACAGATTTGAACCTTTCTTTTGATTGACCAGTTTGAAAAGAGTCCTTTTCTAGAATCTGCAGAGGGATATTTGTGAGCCCTTTATGGCCTAAGGTGAAGTAGGAAATATCTTCACATAAAAATTAGACAGAAGCATTCTGAGAAACTTCTTCATGAAGTGTGCTTTCATTTCACAGAGTTGAACCTCTCTTTTGATTGAGGAGT TR:VR 203:12 54:0 chr3 148238127 r_229 A . PASS END=151117906;SVTYPE=DEL;SVLEN=-2879779 TR:VR 114:7 13:0 chr8 79568590 r_284_0 A [chr8:108975609[T . Too_low_VAF SVTYPE=BND;MATEID=r_284_1 TR:VR 108:4 6:0 chr8 108975609 r_284_1 T [chr8:79568590[T . Too_low_VAF SVTYPE=BND;MATEID=r_284_0 TR:VR 108:4 6:0 chr1 198473444 i_59 G . PASS END=198473444;SVTYPE=INS;SVINSLEN=215;SVINSSEQ=CTCTAGTCCATGTGGCAGTAGACTTTTCAGTGGAAACTTTACAGGCCAGAAGGTAGTGGCATGTCATATTTAAAGTACTGAAGGAAAGAAACTTTAATGCTAGAATAATATATCCGATGAAAATATCCTTCAAACATGAAGGAGAAATAAGGGGCTTTCCCAGACAAACAAACACTGAGGGATTTCATCAACACCAGACCTATTCTACAAGAAAT TR:VR 59:5 13:0 chr10 42098430 d_333 G . Too_low_VAF END=42098415;SVTYPE=INS;SVINSLEN=213;SVINSSEQ=GAATCGAATAGAATTATGGAATGAAATCCATTGTGATCATCATCGAATGGACTCGAATGGAATCATCATCCAATGGAAACTAATGGAATCAACATCGAATGGAATCGAATGGAAACACCATCGAATTGAAACGAATGGAATTATCATGAAATTGAAATGGATGGACTCATCATCGAATGGATTCGAATGGAATCATCGAATGAAATTGATTGA TR:VR 746:7 20:0 chr12 126515306 r_48_0 G ]chr9_KI270719v1_random:142567]T . PASS SVTYPE=BND;MATEID=r_48_1 TR:VR 78:15 20:0 chr9_KI270719v1_random 142567 r_48_1 T T[chr12:126515306[ . PASS SVTYPE=BND;MATEID=r_48_0 TR:VR 78:15 20:0 chr12 40044873 i_250 T . Too_small_size END=40044873;SVTYPE=INS;SVINSLEN=43;SVINSSEQ=TATAAACGCTTGAAAGCAGAACCATGAGGAAGAAAGGAGTTAT TR:VR 24:10 10:0 chr13 97730006 r_64_0 C C]chr3:6074279] . PASS SVTYPE=BND;MATEID=r_64_1 TR:VR 85:48 15:0 chr3 6074279 r_64_1 A A]chr13:97730006] . PASS SVTYPE=BND;MATEID=r_64_0 TR:VR 85:48 15:0 chr20 26598139 i_728 T . PASS END=26598139;SVTYPE=INS;SVINSLEN=371;SVINSSEQ=GAGTTGAACATTCGCTTTCATAGAGGAGGTTGGAAACACTCTTTTTGTAGTATCTGGAAGTGGACATTTGGAGCGCTTGGAGGCCTATGGTGAAAAAGGGAATGTCTTCCCATAAAAACTAGATAGAAGCATTCTCAGAAACTTATTTGTGATGTGTGTCCTCAACTGACAGAGTTGAACATTTCTTTTGAGAGAGCAGTTTTGAAACACTCTTTTTGTGGAATCTGCAAGTGGATATTTGGCTGGCTTTGAGGATTTCGTTGGAAACGGGAATACATATAAAAAGCAGACAGCAGCGTTATGAGAAACTACTTGTTGATGTTTGCATTCAAGTCACAGAATGGAACGTTCCCTTTCATAGAGCAGGTTTG TR:VR 21:3 4:0 chr6 170493191 r_269_0 A [chrX:1587596[C . PASS SVTYPE=BND;MATEID=r_269_1 TR:VR 229:17 36:1 chrX 1587596 r_269_1 C [chr6:170493191[C . PASS SVTYPE=BND;MATEID=r_269_0 TR:VR 229:17 36:1 chrX 156030351 i_1416 G . Too_small_size;Too_low_VAF END=156030351;SVTYPE=INS;SVINSLEN=49;SVINSSEQ=GCGAGGGGTTGGGGTTGAGGGTTAGGGTGGAGGTTGGGGGTTGGGGTTA TR:VR 166:5 18:0 chr1 199957671 i_60 T . PASS END=199957671;SVTYPE=INS;SVINSLEN=3396;SVINSSEQ=AAATTTAATATTATGGAAAAAATCGCTTCAACCTGGGAGGCAGAGGTTGCAGTGAGCCGAGATTGCACCACTGCACTCCACCCAGACAACAGAGCAAGACTCCGTCTCAAAAAATAAAATAAAATAAAAGGAAAAGAAAAAAGAAATTTCAGGCAGAGGAGGTCGCGGCGCCGGAGGCCCCAGAAGGGTCGAAGGCGCCGCGGGCTGGGGTCGGTGGCTTAGGGAGCCCGTCTGGCCATGGTGGCCGCGGCTGGTGGTTGGCGCGGCGGCGCTGACGCCCGCGGGCCCCAGCTGCAGATATGAAGCGGAGCCGCTGCCGCGACCGACCGCAGCCGCCGCCGCCCGACCGCCAGGAGGATGGAGTTCAGCGGGCAGCGGAGCTGTCTCAGTCTTTGCCGCCGCGCCGGCGAGCGCCGCCCGGGAGGCAGCGGCTGGAGGAGCGGACGGGCCCCGCGGGGCCCGAGGGCAAGGAGCAGCCGCCTGCCTTGGCCTCCCAAAGTGCCGAGATTGCAGCCTCTGCCCGGCTGCCACCCCGTCTGGGAAGTGAGGAGTGTCTCTGCCTGGCCGCCCATCGTCTGGGATGTGAGGAGCCCCTCTGCCTGGCTGCCCAGTCTGGAAAGTGAGGAGCGTCTCCGCCCGGCCGCCATCCCATCTAGGAAGTGAGGAGCGCCTCTTCCCAGCCGCCATCACATCTAGGAAGTGAGGAGCGTCTCTGCCCGGCCGCCCATCGTCTGAGATGTGGGGAGCGCCTCTGCCCCGCCGCCCCATCTGGGATGTGAGGAGCGCCTCTGCCCGGCCGAGACCCCGTCTGGGAGGTGAGGAGCGTCTCTGCCCGGCCGCCCCGTCTGAGAAGTGAGGAGACCCTCTGCCTGGCAACCACCCCGTCTGAGAAGTGAGGAGCCCCTCCGCCCGGCAGCTGCCCCGTCTGAGAAGTGAGGAGCCTCTCCGCCCGGCAGCCACCCCATCTGGGAAGTGAGGAGCGTCTCCGCCCGGCAGCCACCCCGTCCAGGAGGGAGGTGGGGGGGGGTCAGCCCCCGCCCGGCCAGCCGCCCCATCCGGGAGGGAGGTGGGGGTCAGCCCCCCGCCCGGCCAGCCGTGCCATCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCTGGCCAGCCGTGCCATCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCAGCCCGGCCAGCCACCCCGTCCGGGAGGGAGATGGGGGGGTCAGCCCCCCACCCGGCCAGCCGCCCCGTCCGGTAGGGAGGTAGGGGGGTCAGCCCCCGCCTGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCTCCGCCCGGCCAGCCGCCCCGTCTGGGAGGTGAGGGGCGCCTCTGCCCAGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCTGTCGGGGAGGGAGGTGGGGGGGTCAGCCCCTCCGCCCGGCCAGCCGCCCCGTCTGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCTGGGAGGGAGGTTGGGGGGGTCAGCCCCCCCGCCCAGCCAGCCGCCCTGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCTGTCCGGGAGGGAGGTGGGGGGGTCGGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCGGCCCCCCGCCCGGCCAGCCGCCCTGTCCGGGAGGGAGGTGGGGGGGGGTCGGCCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCCGCCCAGCCAGCCGCCCTGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCGGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCGGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCGGCCCCCCGTCCGGCCAGCCGCCCCGTCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTTGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCAGGAGGGAGGTGGGGGGGTCAGCCCCCCTGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCACCACCCCGTCTGGGAGGTGTGCCCAACAGCTCATTGAGAACGGGCCAGGATGACAATGGCGGCTTTGTGGAATAGAAAGGCGGGAAAGGTGGGGAAAAGATTGAGAAATCGGATGGTTGCCGTGTCTGTGTAGAAAGAAGTAGACATGGGAGACTTTTCATTTTGTTCTGCACTAAGAAAAATTCCTCTGCCTTGGGATCCTGTTGATCTGTGACCTTACCCCCAACCCTGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCGTTAAGAGTCATCACCAATCCCTAATCTCAAGTAATCAGGGACACAAACACTGCGGAAGGCCGCAGGGTCCTCTGCCTAGGAAAACCAGAGACCTTTGTTCACTTGTTTATCTGCTGACCTTCCCTCCACTATTGTCCCATGACCCTGCCAAATCCCCCTCTGTGAGAAACACCCAAGAATTATCAATAAAAAAATAAATTTAAAAAAAAAAAAAAA TR:VR 67:15 2:0 chr11 28990821 d_362 A . PASS END=28991341;SVTYPE=DEL;SVLEN=-520;SVINSLEN=52;SVINSSEQ=TTACCTTGGGCAGTATGGCCATTTTCACAATATTGATTCTTCCTACCCATGA TR:VR 33:22 5:0 chr13 97737584 r_65_0 A [chr3:5427859[C . PASS SVTYPE=BND;MATEID=r_65_1 TR:VR 92:57 20:0 chr3 5427859 r_65_1 C [chr13:97737584[C . PASS SVTYPE=BND;MATEID=r_65_0 TR:VR 92:57 20:0 chr15 74469796 d_583 A . Too_small_size END=74469839;SVTYPE=DEL;SVLEN=-43 TR:VR 25:5 14:0 chr17 63098523 i_435 A . Too_small_size END=63098523;SVTYPE=INS;SVINSLEN=41;SVINSSEQ=TATATATATATATATATATATGTAAAAATTTATATATATAT TR:VR 29:17 6:0 chr19 29500952 r_126_0 C [chr19:36608669[A . PASS SVTYPE=BND;MATEID=r_126_1 TR:VR 64:4 10:0 chr19 36608669 r_126_1 A [chr19:29500952[A . PASS SVTYPE=BND;MATEID=r_126_0 TR:VR 64:4 10:0 chr3 100807562 r_184 T . PASS END=178982341;SVTYPE=DUP;SVLEN=78174779 TR:VR 155:17 9:0 chr3 150605029 r_230 C . PASS END=169239243;SVTYPE=DEL;SVLEN=-18634214;SVINSLEN=2;SVINSSEQ=GG TR:VR 77:8 19:0 chr4 152957 r_243_0 T [chr9:107775291[G . Too_low_VAF SVTYPE=BND;MATEID=r_243_1 TR:VR 64:3 17:0 chr9 107775291 r_243_1 G [chr4:152957[G . Too_low_VAF SVTYPE=BND;MATEID=r_243_0 TR:VR 64:3 17:0 chr4 8887591 r_244 C . PASS END=9101474;SVTYPE=DUP;SVLEN=213883 TR:VR 43:5 13:0 chr5 21459592 i_1069 T . PASS END=21459592;SVTYPE=INS;SVINSLEN=74;SVINSSEQ=CATGAAGCGAGTCCTGGCGGGGTGGGCCGTGGCCAGCCATGGGAGCGCTCTGGGCCCAGCGAAGGTGGGTTTCC TR:VR 23:8 4:0 chr6 170495567 i_1178 G . PASS END=170495567;SVTYPE=INS;SVINSLEN=780;SVINSSEQ=AGGATGGGGTTGGAGGAACTTCCACAGAGCGGTGGTGAGAGAAGGAGGATGGGGGTTGGAGGGAAATCTAGCAGAGGGATCGTGAAAAGGAGGATAGGGTTGGAGGAACAACAGAGCGGGTGGTAAAAATGAGGATGGGGTTGGAGGAACTACAGAGCGGTGGGTGGTGAAGAGGAGGACGGGGTTGGAGGAACTACAGAGCGGTGGTGAAGAGGAGGACGGGGTTGGAGGAACTACAGAGCGGTGGTGAAGAGGAGGATGGGGTTGGAGGAACTACAGAGCGGTGGTGAAGAGGAGGATGGGGTTGGAGGAACTACAGAGGGGTCGTGAAAAGGAGGATGGGGTTGGAGGAACAACAGAGCGGTGGTAAAAATGAGGATGGGGTTGGAGGAACTACAGAGCGGTGGTGAAGAGGAGGACGGGGTTGGAGGAACTACAGAGCGGTGGTGAAAAGGAGGACGGGGTTGGAGGAACTACAGAGCGGTGGTGAAGAGGAGGATGGGGTTGGAGGAACTACAGAGCGGTGGTGAAAAGGAGGACGGGGGGTTGGAGGAACTACAGAGCGGTGGTGAAGAGGAGGATGGGGTTGGAGGAACTACAGAGCGGTGGTGAAGAGGAGGACGGGGTTGGAGGAACTACAGAGCGGTGGTGAAGAGGAGGATGGGGGTTGGAGGAACTACAGAGCGGTGGTGAAGAGGAGGACGAGGGTTGGAGGAACTACAGAGCGGTGGTGAAGAGGAGGATGGGGTTGGAGGAACTACAGAGCGGTGGTAAAAATGA TR:VR 11:3 6:0 chr7 159152462 i_1217 C . PASS END=159152462;SVTYPE=INS;SVINSLEN=509;SVINSSEQ=CGTCCAGCGGTCCCATGGTGTAATTCTCCGTCCAGGGGTCCCATGGTATAATTCTCCATTGAGCGGTCCCATGGTGTAATTCTCCGTCCAGGGGTCCCATGGTGAAATTCCCTCCGTCCAGGGGTCCCATGGTGTAATTCTCCGTCCAGGGGTCCCATGGTATAATTCTCCATCGAGCGGTCCCATGGTGTAATTCTCCGTCCAGGGGTCCCATGGTGAAATTCTCCGTCCAGGGGTCCCATGGTGTAATTCTCCGTCCAGGGGTCCCATGGTGAAATCTCTCCGTCCAGGGGTCCCATGGTGTAATTCTCCGTCCAGGGGTCCCATGGTATAACCTCCATTGAGCGGTCCCATGGTGTAATTCTCCGTCCAGGGGTCCCATGGTGAAATTCTCCATCCAGGGGTCCCATGGTGAAATTCTCCGTCCAGGGGTCCCATGGTGAAATTCTCCGTCCAGGGGTCCCATGGTGTAATTCTCCGTCCAGGGGTCCCATGGTGTAATTCTCCAC TR:VR 29:3 8:0 chr1 246276111 d_229 C . PASS END=246276124;SVTYPE=INS;SVINSLEN=346;SVINSSEQ=TAGCCGTATTAACACTGGCAAGTTATTTAATGCCTCTAGTGGAGTCTGATGTATGTTTGAATACTAACTCTGTTTTTTACTAGCTGTATTAACACTGGCAAGTTATTTAATGTCTCTGGTGGAGTCTGATACTGATGCCCATGTTTGAATACTAACTCTGTTTTTTCACTAGCCGTATTAACACTGGCAAGTTATTTAATGCCTCTAGTGGAGTCTGATACCCATGTTTGAATACTAACTCTGTTTTTTACTAGCCGTATTAACACTGGCAAGTTATTTAATGTTTCTAGTGGAGTCTGATGCCCATGTTTGAATACTAACTCTGTTTTTCACTAGTCGTATTAAC TR:VR 52:21 5:0 chr13 98436099 r_66_0 T T[chr3:181100605[ . PASS SVTYPE=BND;MATEID=r_66_1 TR:VR 170:25 11:0 chr3 181100605 r_66_1 T ]chr13:98436099]T . PASS SVTYPE=BND;MATEID=r_66_0 TR:VR 170:25 11:0 chr17 65645002 d_714 A . PASS END=65645255;SVTYPE=DEL;SVLEN=-253 TR:VR 25:3 3:0 chr19 29511320 r_127 A . PASS END=36648310;SVTYPE=DEL;SVLEN=-7136990 TR:VR 76:4 10:0 chr3 100819699 r_185 C . PASS END=106859568;SVTYPE=DEL;SVLEN=-6039869 TR:VR 95:44 15:0 chr3 151435496 r_231 C . PASS END=167821123;SVTYPE=DEL;SVLEN=-16385627 TR:VR 57:15 15:0 chr5 21497042 r_251_0 C [chr5:34184257[A . Too_low_VAF SVTYPE=BND;MATEID=r_251_1 TR:VR 142:3 38:0 chr5 34184257 r_251_1 A [chr5:21497042[A . Too_low_VAF SVTYPE=BND;MATEID=r_251_0 TR:VR 142:3 38:0 chr13 98548874 r_67_0 A ]chr3:180974160]C . Too_low_VAF SVTYPE=BND;MATEID=r_67_1 TR:VR 130:5 9:0 chr3 180974160 r_67_1 C C[chr13:98548874[ . Too_low_VAF SVTYPE=BND;MATEID=r_67_0 TR:VR 130:5 9:0 chr3 102115701 d_1116 T . PASS END=102116306;SVTYPE=DEL;SVLEN=-605 TR:VR 23:11 3:0 chr1 246692542 r_22_0 C [chr2:206974[G . Too_low_VAF SVTYPE=BND;MATEID=r_22_1 TR:VR 144:6 26:0 chr2 206974 r_22_1 G [chr1:246692542[G . Too_low_VAF SVTYPE=BND;MATEID=r_22_0 TR:VR 144:6 26:0 chr10 131043156 i_163 G . PASS END=131043156;SVTYPE=INS;SVINSLEN=143;SVINSSEQ=GGTAAGATAGGGTATGGGGGGTGGGGTAAGATAGGGTATCGGGGGTGGGGTAAGATAGGGTATGGGGGGTGGGGTAAGATAGGTGTATGGGGGGTGGGTAAGATAGGGTATGGGGGGGGGGGGGGTGGGGTAAGATAGGGTAT TR:VR 33:3 9:0 chr13 98931261 r_68_0 G ]chr4:137489932]GAA . PASS SVTYPE=BND;MATEID=r_68_1;SVINSLEN=2;SVINSSEQ=GA TR:VR 102:8 15:0 chr4 137489932 r_68_1 A ATC[chr13:98931261[ . PASS SVTYPE=BND;MATEID=r_68_0;SVINSLEN=2;SVINSSEQ=TC TR:VR 102:8 15:0 chr14_GL000225v1_random 62932 i_319 T . Too_low_VAF END=62932;SVTYPE=INS;SVINSLEN=272;SVINSSEQ=CCAAGTGATGTAACACTTGTCTAGAATCTGCCTAAATGGGCTTTGTGACATAACTCTGCACTGATCATCCAGGTGATGGGGCTTTTGTCTAGGCTCTGCCTAAGGGTGCATTGTGACATATTTCTGCACTGATCACCCAGGTGACGGACTCTTGTCTTGGGTCTGCCTATGGGGGCATTGTGACATATCTCTGCACTGATCACCCAGGTGATGTAACTGTTGTATAAGCTCTGCCTACAGGGGAATTGTGAGAGATCTCTGCACTGATCACT TR:VR 432:12 118:0 chr20 64093698 i_791 T . PASS END=64093698;SVTYPE=INS;SVINSLEN=246;SVINSSEQ=GGGGGCAGTGTGTGGGGCAGTGTGGGGGCAGTGTGGGGGCAGTGTGTGGGTCAGTGTGTGCGCAGTGTGGGGGTCAGTGTGGGGGCAGTGTGGGGGCAGTGTGGGGGCAGTGTGTGGGTCAGTGTGGGGGCAGTGTGGGGGGCAGTGTGGGGGGCAGTGTGTGGGGCAGTGTGGGGGCAGTGTGGGGGGGGGCAGTGTGGGGGCAGTGTGTGGGTCAGTGTGGGGGCAGTGTGGGGGGCAGTGTGG TR:VR 40:17 1:0 chr4 95120607 i_969 G . PASS END=95120607;SVTYPE=INS;SVINSLEN=58;SVINSSEQ=TCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC TR:VR 28:3 8:0 chr8 130049269 d_1466 G . Too_small_size END=130049249;SVTYPE=INS;SVINSLEN=1;SVINSSEQ=G TR:VR 57:6 4:0 chr9 38242456 d_1492 A . Too_small_size END=38242416;SVTYPE=INS;SVINSLEN=87;SVINSSEQ=GGTGAGGGGCGCCTCTGCCCAGCCGCCCCTACTGGAAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGG TR:VR 11:11 3:0 chr13 99505961 r_69_0 G G[chr3:187733095[ . PASS SVTYPE=BND;MATEID=r_69_1 TR:VR 74:12 9:0 chr3 187733095 r_69_1 A ]chr13:99505961]A . PASS SVTYPE=BND;MATEID=r_69_0 TR:VR 74:12 9:0 chr21 8236034 r_159_0 C C[chrY:56831182[ . Too_low_VAF SVTYPE=BND;MATEID=r_159_1 TR:VR 644:6 402:0 chrY 56831182 r_159_1 C ]chr21:8236034]C . Too_low_VAF SVTYPE=BND;MATEID=r_159_0 TR:VR 644:6 402:0 chr4_GL000008v2_random 144017 d_1208 G . PASS END=144096;SVTYPE=DEL;SVLEN=-79;SVINSLEN=3;SVINSSEQ=CCA TR:VR 63:7 26:0 chr8 130049299 d_1467 G . Too_small_size END=130049318;SVTYPE=DEL;SVLEN=-19 TR:VR 57:15 4:0 chr13 99505998 r_70_0 A ]chr3:84846663]G . PASS SVTYPE=BND;MATEID=r_70_1 TR:VR 72:18 18:0 chr3 84846663 r_70_1 G G[chr13:99505998[ . PASS SVTYPE=BND;MATEID=r_70_0 TR:VR 72:18 18:0 chr15 94243318 i_357 T . PASS END=94243318;SVTYPE=INS;SVINSLEN=107;SVINSSEQ=ATATGCGTATGTACACACATACGTATGCGTATATGCGTATGTACACACATACGTATGCGTATATGCGTATGTACACACATACGTATGCGTATATGCGTATGTACACA TR:VR 26:24 4:0 chr5 22430824 i_1073 C . PASS END=22430824;SVTYPE=INS;SVINSLEN=1979;SVINSSEQ=TTTTTTTTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTGTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACCCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGATGATGGGGTTTTCTAGATAAACAATCATGATTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCGAAAATTTTCTCCCATTTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGGCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGAGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGTGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGCATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATATTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGAAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAATAAAAAAAAAATATGCTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAACTACTT TR:VR 25:10 10:0 chr5 64431959 r_257_0 G G]chr5:64483091] . Too_low_VAF SVTYPE=BND;MATEID=r_257_1 TR:VR 81:3 17:0 chr5 64483091 r_257_1 T T]chr5:64431959] . Too_low_VAF SVTYPE=BND;MATEID=r_257_0 TR:VR 81:3 17:0 chr8 130049568 d_1468 G . PASS END=130049550;SVTYPE=INS;SVINSLEN=86;SVINSSEQ=GGAACACATGGGGGGCAGAGGAGAACACATGGGGGCAGAGGGGGAACACATGGGGGGCAGAGGAGAACACATGGGGGGCAGAGGAG TR:VR 58:7 4:0 chr12 128496729 r_50_0 T [chr21:9963465[T . PASS SVTYPE=BND;MATEID=r_50_1 TR:VR 90:15 17:0 chr21 9963465 r_50_1 T [chr12:128496729[T . PASS SVTYPE=BND;MATEID=r_50_0 TR:VR 90:15 17:0 chr13 99572894 r_71_0 C [chr4:132405464[T . PASS SVTYPE=BND;MATEID=r_71_1 TR:VR 86:14 18:0 chr4 132405464 r_71_1 T [chr13:99572894[T . PASS SVTYPE=BND;MATEID=r_71_0 TR:VR 86:14 18:0 chr20 64127820 d_1036 G . Too_small_size END=64127784;SVTYPE=INS;SVINSLEN=2;SVINSSEQ=CT TR:VR 47:6 6:0 chr3 104588166 r_186_0 C [chr3:142100301[T . PASS SVTYPE=BND;MATEID=r_186_1 TR:VR 58:12 21:0 chr3 142100301 r_186_1 T [chr3:104588166[T . PASS SVTYPE=BND;MATEID=r_186_0 TR:VR 58:12 21:0 chr3 165265488 i_897 C . PASS END=165265488;SVTYPE=INS;SVINSLEN=239;SVINSSEQ=TTCCTTCCTTCCCTCCTCCCTCCGTTCCTTCCTTCCTCCCCCCCTCCGTTCCTTCCTTCCTTCCTTCCTCCCACCTTCCTTCCTTCCTTCCTTCCCCCTCCCTTCACCTCCCTTCCTCCCTTCTTTCCTTCCTTCCTCCCTTCTTCCTGCCTTCCTTCCTTCCTTCCTTCCTTCCTCCCTTCTTTCCTTCCTTCCTTCCTCCCTCCCTCCCTTCCTTCCTTCCTTCCTCCCCCCTCCGT TR:VR 17:9 8:0 chr13 99574810 r_72_0 C C]chr13:100539740] . PASS SVTYPE=BND;MATEID=r_72_1 TR:VR 72:34 18:0 chr13 100539740 r_72_1 A A]chr13:99574810] . PASS SVTYPE=BND;MATEID=r_72_0 TR:VR 72:34 18:0 chr19 34390705 i_510 C . PASS END=34390705;SVTYPE=INS;SVINSLEN=52;SVINSSEQ=CCTGGTATGAGGATCTGGGTCTGTCAATATCTGAGGAGGTAGGAATCTGGTA TR:VR 39:3 28:0 chr2 239069542 d_935 T . PASS END=239069699;SVTYPE=INS;SVINSLEN=206;SVINSSEQ=TGGTGAGAGGGAGTCACGGTGCAAGCCAGCAAGCCCCACTGCACTTGCTGGGTGAGAGGGAGTCACGGTGCAAGCCAGCAAGCCCCACGACACTTGCTTAGTGAGAGTGAGTCACGGTGCAAGCCAGCAAGCCCCACGACACTTGCTTAGTGAGAGTGAGTCACGGTGCAAGCCAGCAAGCCCCACGACACTTGCTTGGTGAGAGG TR:VR 25:7 4:0 chr22 10691589 r_164_0 A ]chrUn_KI270746v1:14193]C . PASS SVTYPE=BND;MATEID=r_164_1 TR:VR 37:5 17:0 chrUn_KI270746v1 14193 r_164_1 C C[chr22:10691589[ . PASS SVTYPE=BND;MATEID=r_164_0 TR:VR 37:5 17:0 chr4 24584523 d_1149 G . PASS END=24584584;SVTYPE=DEL;SVLEN=-61 TR:VR 23:13 6:0 chr5 259663 d_1211 C . PASS END=260175;SVTYPE=DEL;SVLEN=-512 TR:VR 31:3 1:0 chr1 247129852 i_103 A . PASS END=247129852;SVTYPE=INS;SVINSLEN=204;SVINSSEQ=CATTGAGTACTTCCCCCAGCAGGATGGGGTGGGAGGATTCAGGAGATGAGAGGGAGGGTGGACATTGGAGTACTTCCCCCAGCAGGATGGGGTGGGAGGATTCAGGAGATGAGAGGGAGGGTGGGCATTGAGTACTTCCCCCAGCAGGATGGGGTGGGAGGATTCAGGAGATGAGAGGGAGGGTGGACATTGAGTACTTCCCCC TR:VR 48:28 1:0 chr12 128971408 r_51_0 T T]chr21:8447439] . Too_low_VAF SVTYPE=BND;MATEID=r_51_1 TR:VR 528:3 58:0 chr21 8447439 r_51_1 C C]chr12:128971408] . Too_low_VAF SVTYPE=BND;MATEID=r_51_0 TR:VR 528:3 58:0 chr12 49874333 r_46_0 C C]chr12:126696099] . PASS SVTYPE=BND;MATEID=r_46_1 TR:VR 82:17 10:0 chr12 126696099 r_46_1 C C]chr12:49874333] . PASS SVTYPE=BND;MATEID=r_46_0 TR:VR 82:17 10:0 chr22 10718341 d_1063 T . Too_low_VAF END=10722769;SVTYPE=DEL;SVLEN=-4428;SVINSLEN=119;SVINSSEQ=CCGTTCCCTTTATTCCATTCCATTCCATTCTATTCAAGTGCATTCCATTCCATTCCATTCCATTCCATTCCAATCCATTCCATTTCACTCCATTCCATTCCATTCGTGTCCATTCCATT TR:VR 83:4 63:1 chr3 104691555 r_188 G . PASS END=168887131;SVTYPE=DEL;SVLEN=-64195576 TR:VR 62:7 14:0 chr3 168893878 r_232_0 A A]chr3:169239581] . PASS SVTYPE=BND;MATEID=r_232_1 TR:VR 68:8 23:0 chr3 169239581 r_232_1 A A]chr3:168893878] . PASS SVTYPE=BND;MATEID=r_232_0 TR:VR 68:8 23:0 chr9 115681567 i_1299 T . PASS END=115681569;SVTYPE=INS;SVINSLEN=738;SVINSSEQ=TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATCCAGTAATAAACCTTTATATTTTCTCATCAGTTTAATAATAACATTTTTTGCCAGTAATTGGGTATATTTTGGGAAATAGTAGAATAAAGATTTGTAGACTCTCTTACATCTCCTAAAAGAAAATTCACTAAGCATGTATGTGGAAAACATCTTAAAATAAAGATAGATAAGAACGTTTTTGTGAATTAAAAAAGTAATGTGAACATGTTAAGGTATTTGAACTTACATTTAAATTGGATTATAAGTAACTTAACATTTTTAATGCAAGCATATTAACCTTCTTGTGCTTATGAGATTATTTTGCCAAATTGTAGGACAGAGGAAACTGCTGACTCCACAAAGATCTTCCCTTTGACCAGTTCTCTACTAGGAGCTTAGTTTCCTGATTTTTAGTACAATTTGATATTGAGGAACATATATTTAATAAGGCCGGGTACTTAGGTATAATAATTGGGTAAATTGTACCTTTTATTTTGGCCCTAACTGGTCACACTTCTGGGAATATTCTTCCCCTATCAGGAATTTCCATGTTACCAATATAATTTTGGGATTCAGTCACCTTTATTAGACATGTGGCCCCATGTGAAGTTTCTTTTTCTTTCTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGA TR:VR 29:22 12:0 chr10 66446157 r_29_0 G G[chr3:198122876[ . Too_low_VAF SVTYPE=BND;MATEID=r_29_1 TR:VR 93:4 24:0 chr3 198122876 r_29_1 G ]chr10:66446157]G . Too_low_VAF SVTYPE=BND;MATEID=r_29_0 TR:VR 93:4 24:0 chr3 104943794 r_189_0 A [chr3:105141947[T . PASS SVTYPE=BND;MATEID=r_189_1 TR:VR 63:11 14:0 chr3 105141947 r_189_1 T [chr3:104943794[T . PASS SVTYPE=BND;MATEID=r_189_0 TR:VR 63:11 14:0 chr3 170212861 r_233 A . PASS END=171913720;SVTYPE=DEL;SVLEN=-1700859 TR:VR 67:18 18:0 chr9 117347506 i_1300 A . PASS END=117347506;SVTYPE=INS;SVINSLEN=1489;SVINSSEQ=TCCTTTGGAAGTTATTTTTTGGTAAGCATTGTAATAGTGTGTTATTTACAAGTGAAAGTAACAAAATTTATTATTGTCGTAAGAGCATATGTCCACAGTCTGCCATCTACCTACATGTAGATGTGGTTATCAAATATATGCATGCTAAAATGCATAGCTGATGTGTTGTTTGGGTAAGTAACAAAAATGCTTAGTGCACAGTTTTAAATTAGCGAGGAAGATACTTGAATTCTGTTTCCTGTACTGTCTCTGGAAAAATCAGGAATTACAGTTACTGAAATGTTGACATTGATTGAGCTCCTACTGGGGACTTGGTGCAATCTAAGTACTTGCTAATCTTTCTCATTACTAAGCAATCTAGTCATGCACTTCCTCAGTTAATCCTTACAACAGAGCATAACATGGGGATTATTACTGATTATCCTTATTTTACACACGGGAAAGACTCAAGCACAGAGAAACTAAGGATCTTGCTTGAGGTCATGTGACTAGTAGACAGTAGAACCAAGATTTGGACCCATGACCAATTCCTGAAGCACTGAATACTTCCTTGCATAGGACATTGCTCCTGAATTTCTTCACATCTGTTCTTAGACACCTGATGCCTTGGCACTATCCCCACAAAAATTAAAATAAAGTTAAACGACTGTCTGTAAATTGCTCTTTGAGTATGGGTATCATTGACGTAGGAGACATAATTTCAAATTAGATGATAGCATGTATGGTGTGGAGTTCTCCCATCTCTGATAAACATTGGAATTCATTAATGTAGAAACAAAGAATCATCATCACCATTATCATTACACATTCTCCGAAAATTATTATTTCACACTATTCTCTGAGGTTAAATTTGCTGCCAATGTTTATCAATTGTCTACTTTGCGTAAGTCCTTTAAATTGTACCAAGTTGTGTTTATAAAATGAGGGTGTGACTGGCGGAATTCTGAAGGTGCCCGTCTTCCCCAAGATTCCTGTCCCCTGGTTATTCCATCAAACATGAACATAGACACTGCTGGGAAGGAGCTTTGGAGATGGAATTAAGGTACTAATCAGTTAACCTTAATATAAGAAAATTATCCTGGATTATCTAGGTGGGTTCAAACTCCTCATATGAGTCCTTAGAAACAGAAGAGGAAGAAAGAAGAGATTCTAAGCATGATGGGGGACTTGAAGTTCCATTGCTGTTGCTGAGACATAGGAGGGCCCATGTACTAGGACTAGATAGAGACCTCTAGGAGCTAAGGGCAGTACAAGCTGACAGCCAGCTCAGAACAGGCCTTCAGACCAACAATCCCAATGAGCTTGGAAGTAGATTCTTTCCTGAAAGTCTCCAGCAAAGAATGCATCTCTACTGACACCTTCATATTAGGAAAATGAGAGCCATACTGGACTTCAAACCTACTGAACTGACAGCCAATAAGTGGAAACCATTGTTGTTTTAAATTGCTACTGTTGTAATTTGTTTCAGCAGCAATAGAAAACTAATTCA TR:VR 43:6 11:0 chr9 43198141 d_1496 T . PASS END=43198259;SVTYPE=DEL;SVLEN=-118;SVINSLEN=117;SVINSSEQ=TCTTTTTGATGTGTGCATTCAACTCACAGGGTTGAACATTTCTTTCGATAGGGCAGTTTTGAAACACTCTTTTTGTAGAATCTGCAAGTGGACATTTCTGAACTTTGAGGCTTATGG TR:VR 26:7 8:0 chrX 1637250 d_1595 T . PASS END=1639283;SVTYPE=DEL;SVLEN=-2033;SVINSLEN=60;SVINSSEQ=AAGGACTGTGTCCCAGCTCTCCTGTGAGGTCCACCCATCCTGATGCTTCACGAGGACGTG TR:VR 14:13 2:0 chr10 66446157 r_30_0 G G[chrY:18391152[ . PASS SVTYPE=BND;MATEID=r_30_1 TR:VR 33:3 13:0 chrY 18391152 r_30_1 G ]chr10:66446157]G . PASS SVTYPE=BND;MATEID=r_30_0 TR:VR 33:3 13:0 chr12 129855218 d_441 G . PASS END=129855912;SVTYPE=DEL;SVLEN=-694;SVINSLEN=29;SVINSSEQ=GGATGGGTGCCCTTATAACAGAGTCCGGG TR:VR 30:5 6:0 chr18 21712243 d_750 A . PASS END=21712297;SVTYPE=DEL;SVLEN=-54 TR:VR 28:10 4:0 chr2 89792980 d_835 A . Too_low_VAF END=89793732;SVTYPE=DEL;SVLEN=-752;SVINSLEN=187;SVINSSEQ=AACGATTCCATTCGATGATTCCATTCAATTCCATTCGATTATGATTGCATTTGATTCCATTCGCTGATTGCATTTGATTCCATTCGATGATAATTTCATTCGAGTCCATTCGACATTTCCATTCCATTCCATTCGAAGATGATTCCATTCGATTCCATTTGATGATTCTATTCGATTCTATTCGATC TR:VR 65:3 12:0 chr3 105398837 r_190_0 T T]chr3:151120267] . PASS SVTYPE=BND;MATEID=r_190_1 TR:VR 83:15 10:0 chr3 151120267 r_190_1 C C]chr3:105398837] . PASS SVTYPE=BND;MATEID=r_190_0 TR:VR 83:15 10:0 chr8 36665957 d_1441 A . PASS END=36666124;SVTYPE=DEL;SVLEN=-167;SVINSLEN=36;SVINSSEQ=ACCATTGTGGAAGACAGTGTGGCGATTCCTCAAGGA TR:VR 83:21 5:0 chr10 71875861 i_152 G . PASS END=71875861;SVTYPE=INS;SVINSLEN=79;SVINSSEQ=CCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCTCGGATGGGGTGGCTGAC TR:VR 34:9 1:0 chr12 60273862 d_426 T . PASS END=60273937;SVTYPE=DEL;SVLEN=-75;SVINSLEN=1;SVINSSEQ=A TR:VR 36:10 6:0 chr14_GL000225v1_random 103601 i_325 A . Too_low_VAF END=103689;SVTYPE=INS;SVINSLEN=536;SVINSSEQ=CTGGAGACATTGTGACGTATCTCCGCACTGATCACCCAGGTGATGTCACTTTTGTCTAGGAAATGGCTACAGGGACATTGTGACATGTCACTGCACTGATCACACAGCTGATGTAACTCTTGTCTAGGCTCTGGCTACAGGGGGCTTGTGACACATCTCTGCACTAATCACCCAGGTGATGCAAACCTTGTCTAGGCTCTGCCAAAAGGGGGCATTGTGACATAACTCTGCACTGATCACCCAGGTGATGGGACTTGTCTCTAGGCTCTGCCTACAGGGGCATTGTGACATATCTCTGCAGTGATAACCCAGGTGATGTAAGTCTTGTCTATATCTGCCTACTGGTGGCACTGTGGCATATTTCTGCACTGATCACCCAGATGATGGACTCTTGTCTTGGATCTGCCTATGGGGTCATAGTGACATATCTCTGCACTGATCACTCATGTGATGTAACGCTTGTCATAGCTGTGCCTGAAGGGGAATTGTGACAGATATCTCCACGGATCACCCTGGTGATGCAACAACACCACGAC TR:VR 215:4 59:1 chr18 23181862 r_119 T . PASS END=28255991;SVTYPE=DEL;SVLEN=-5074129 TR:VR 44:7 12:0 chr20 28728979 r_153_0 C ]chrY:10933050]ACTGCACTCCAAAC . Too_low_VAF SVTYPE=BND;MATEID=r_153_1;SVINSLEN=13;SVINSSEQ=ACTGCACTCCAAA TR:VR 143:6 26:0 chrY 10933050 r_153_1 C CTTTGGAGTGCAGT[chr20:28728979[ . Too_low_VAF SVTYPE=BND;MATEID=r_153_0;SVINSLEN=13;SVINSSEQ=TTTGGAGTGCAGT TR:VR 143:6 26:0 chr3 174340009 r_234_0 C CATATATATATATATATATATATATATCCCTCTTGGAGATATAGATATATATATATATATATCCCTTGGAGATATATATATATATATATATATATATATATATCCCTCTTGGAGATATATATATATATATATATC]chr3:178759292] . Too_low_VAF SVTYPE=BND;MATEID=r_234_1;SVINSLEN=134;SVINSSEQ=ATATATATATATATATATATATATATCCCTCTTGGAGATATAGATATATATATATATATATCCCTTGGAGATATATATATATATATATATATATATATATATCCCTCTTGGAGATATATATATATATATATATC TR:VR 132:6 12:0 chr3 178759292 r_234_1 G GGATATATATATATATATATATCTCCAAGAGGGATATATATATATATATATATATATATATATATCTCCAAGGGATATATATATATATATATCTATATCTCCAAGAGGGATATATATATATATATATATATATAT]chr3:174340009] . Too_low_VAF SVTYPE=BND;MATEID=r_234_0;SVINSLEN=134;SVINSSEQ=GATATATATATATATATATATCTCCAAGAGGGATATATATATATATATATATATATATATATATCTCCAAGGGATATATATATATATATATCTATATCTCCAAGAGGGATATATATATATATATATATATATAT TR:VR 132:6 12:0 chr7 45610568 i_1188 G . PASS END=45610568;SVTYPE=INS;SVINSLEN=343;SVINSSEQ=GGAGGTGATAGTGGAGGTGTGGAGGTGATGGTGGGAGGTGTGGAGGTGATGGCGGAGTTGGAGAAGTGATGATGGAAGTGAGGAGGTGATGGTGGAGGTGTGGGGGTGATGGTGGAGGTGGGGGAGGTGATGGTGGAGGTATGGAGGTGATGGTGGAGGTGTGGAGGCTGATATTGGAGTTGTGGAGATGATGGTGGAGGTGGGAAGGTGATGGTGGAGGTGGGGAGGTGATAATGGAAGTATGGAGGTGATTTTGGAGGTGAGGAGGTGATAGTGGAGGTGTAGAGGTGATGGTGGAGGTGGGGGGTGATAGTGGAAGTGTGGAGGTGGTGGTGGAGGTGTG TR:VR 34:5 7:0 chr10 74143 d_248 C . PASS END=74639;SVTYPE=DEL;SVLEN=-496 TR:VR 20:3 9:0 chr22 10726058 d_1065 T . Too_small_size END=10726099;SVTYPE=DEL;SVLEN=-41;SVINSLEN=1;SVINSSEQ=A TR:VR 83:5 41:1 chr3 108818031 d_1117 T . PASS END=108818084;SVTYPE=DEL;SVLEN=-53 TR:VR 91:8 6:0 chr3 174340009 r_235_0 C CATATATATATATATATATATATATATCCCTCTTGGAGATATAGATATATATATATATATATCCCTCTTGGAGATATATATATATATATATATATATATATATATATCCTCTTGAGGATATATATATATATATATATATATCCCTCTTGG]chr3:178759220] . PASS SVTYPE=BND;MATEID=r_235_1;SVINSLEN=149;SVINSSEQ=ATATATATATATATATATATATATATCCCTCTTGGAGATATAGATATATATATATATATATCCCTCTTGGAGATATATATATATATATATATATATATATATATATCCTCTTGAGGATATATATATATATATATATATATCCCTCTTGG TR:VR 132:9 13:0 chr3 178759220 r_235_1 T TCCAAGAGGGATATATATATATATATATATATATCCTCAAGAGGATATATATATATATATATATATATATATATATATCTCCAAGAGGGATATATATATATATATATCTATATCTCCAAGAGGGATATATATATATATATATATATATAT]chr3:174340009] . PASS SVTYPE=BND;MATEID=r_235_0;SVINSLEN=149;SVINSSEQ=CCAAGAGGGATATATATATATATATATATATATCCTCAAGAGGATATATATATATATATATATATATATATATATATCTCCAAGAGGGATATATATATATATATATCTATATCTCCAAGAGGGATATATATATATATATATATATATAT TR:VR 132:9 13:0 chr5 66721670 d_1267 G . PASS END=66721786;SVTYPE=DEL;SVLEN=-116 TR:VR 29:12 8:0 chr6 88444236 d_1328 T . PASS END=88444887;SVTYPE=DEL;SVLEN=-651;SVINSLEN=1;SVINSSEQ=A TR:VR 14:4 5:0 chr18 29726277 r_120 C . PASS END=31684726;SVTYPE=DEL;SVLEN=-1958449 TR:VR 44:7 12:0 chr3 176370558 r_236 A . PASS END=182931101;SVTYPE=DUP;SVLEN=6560543 TR:VR 149:38 7:0 chr7 48269344 d_1357 T . PASS END=48270203;SVTYPE=DEL;SVLEN=-859 TR:VR 15:6 7:0 chrY 11330070 d_1633 T . Too_low_VAF END=11330514;SVTYPE=DEL;SVLEN=-444;SVINSLEN=33;SVINSSEQ=CAAAATGACCCTGTAGGCAGAGCCTACTCAAGT TR:VR 193:3 55:1 chr1 247892181 d_234 T . PASS END=247894336;SVTYPE=DEL;SVLEN=-2155;SVINSLEN=64;SVINSSEQ=GTAATTTAGTCTTGTTGGCATAGGGATAATGCAGAGTAGTTTGGAGCTGTAGCCCAAAATGTAT TR:VR 52:24 5:0 chr18 32915211 r_121_0 A ATGGAATCATTGAATGC[chr2:90385477[ . Too_low_VAF SVTYPE=BND;MATEID=r_121_1;SVINSLEN=16;SVINSSEQ=TGGAATCATTGAATGC TR:VR 419:5 98:0 chr2 90385477 r_121_1 A ]chr18:32915211]GCATTCAATGATTCCAA . Too_low_VAF SVTYPE=BND;MATEID=r_121_0;SVINSLEN=16;SVINSSEQ=GCATTCAATGATTCCA TR:VR 419:5 98:0 chr3 109223252 d_1118 T . PASS END=109223347;SVTYPE=DEL;SVLEN=-95 TR:VR 86:20 8:0 chr8 1375386 d_1416 T . PASS END=1375854;SVTYPE=DEL;SVLEN=-468;SVINSLEN=144;SVINSSEQ=TGGGTTAACGACCCCTCTCCACGGCCTCAGAACTGATCCCCCACCTCCTACATTTGGGTTAACGACACCTCTCCACGACCTCAGAACTGAGCCCCCACCTCCTACATTTGGGTTAACGACACCTCTCCACGGCCTCAGAACTGA TR:VR 13:10 3:0 chrY 11330636 d_1634 C . Too_low_VAF END=11330714;SVTYPE=DEL;SVLEN=-78;SVINSLEN=10;SVINSSEQ=AGAGCCCAGA TR:VR 172:5 49:1 chr10 87840193 r_31 A . PASS END=93331903;SVTYPE=DEL;SVLEN=-5491710 TR:VR 37:5 12:0 chr14_GL000225v1_random 108084 i_327 T . Too_low_VAF END=108084;SVTYPE=INS;SVINSLEN=206;SVINSSEQ=GTAGGTAAAGCCTAGACAACTTTTAGATCACCTCAGCAATCACTGCAGGGACATGTCCCAATGTGCCTCTCAGCAGAGCTTAGACAAGTGTCACATCTCCTGCGTTATCAGTGCAGAGATAAGTCACAATGCCCCCAAAGGCAGAGCCTAGACAAGAGTTAAATAACCCGGGTGATCCGTGCAGAGTGATGTTACAACGCCTTCCG TR:VR 215:5 107:1 chr16 12762416 d_595 C . PASS END=12762644;SVTYPE=DEL;SVLEN=-228 TR:VR 34:7 11:0 chr2 101073942 d_909 C . PASS END=101074003;SVTYPE=DEL;SVLEN=-61 TR:VR 22:5 7:0 chr2 89795417 d_840 T . Too_small_size END=89795423;SVTYPE=DEL;SVLEN=-6;SVINSLEN=3;SVINSSEQ=CAA TR:VR 62:5 15:0 chr4 3613615 d_1146 A . PASS END=3613761;SVTYPE=DEL;SVLEN=-146;SVINSLEN=14;SVINSSEQ=TGGCACATGCATCA TR:VR 22:6 6:0 chr8 36666224 d_1445 T . PASS END=36666897;SVTYPE=DEL;SVLEN=-673;SVINSLEN=205;SVINSSEQ=TTCCTTATTGTTTCCAAAAATATTTGGGCCACTGATTCTCCCTTGGTTGTAAGTTGACCTGCCAAATAAAGAGTTCTGTAATGTTTACGTTATTATTCAGAAAATATTTATGAATTTCTTTGAGAAACATAAGATGATAATATCAAAAGATAATCATCTCTGGGTGGCTTCTTCCTAGAGAAATTTTAAAGCAAATATCTGCAGC TR:VR 84:61 5:0 chr10 8806658 r_24_0 A AGGAAGGAAGGAAGGAAGAGAGGGA]chr4:7449391] . PASS SVTYPE=BND;MATEID=r_24_1;SVINSLEN=24;SVINSSEQ=GGAAGGAAGGAAGGAAGAGAGGGA TR:VR 50:3 14:0 chr4 7449391 r_24_1 C CTCCCTCTCTTCCTTCCTTCCTTCC]chr10:8806658] . PASS SVTYPE=BND;MATEID=r_24_0;SVINSLEN=24;SVINSSEQ=TCCCTCTCTTCCTTCCTTCCTTCC TR:VR 50:3 14:0 chr3 177382019 r_237_0 T [chr3:183632740[T . Too_low_VAF SVTYPE=BND;MATEID=r_237_1 TR:VR 161:8 11:0 chr3 183632740 r_237_1 T [chr3:177382019[T . Too_low_VAF SVTYPE=BND;MATEID=r_237_0 TR:VR 161:8 11:0 chr9 85848129 d_1501 G . PASS END=85852759;SVTYPE=DEL;SVLEN=-4630 TR:VR 48:12 13:0 chrX 20759955 d_1601 A . PASS END=20762352;SVTYPE=DEL;SVLEN=-2397 TR:VR 24:5 6:0 chrY 56828243 d_1636 C . Too_small_size;Too_low_VAF END=56828233;SVTYPE=INS;SVINSLEN=49;SVINSSEQ=GAGTCCATCCAATTGAATCCATTCCATTTCAGTCCATTCTATTCGTGTC TR:VR 293:4 128:1 chr10 89150178 i_153 A . PASS END=89150178;SVTYPE=INS;SVINSLEN=353;SVINSSEQ=ATCACACTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATCCAGTAATAAACCTTTATATTTTCTCATCAGTTTAATAATAACATTTTTTGCCAGTAATTGGGTATATTTTGGGAAATAGTAGAATAAAGATTTGTAGACTCTCTTACATCTCCTAAAAGAAAATTCACTAAGCATGTATGTGGAAAACATCTTAAAATAAAGATAGATAAGAACGTTTTTGTGAATTAAAAAGTAATGTGAACATGTTAAGGTATTTGAACTTACATTTAAATTGGATTATAAGTAACTTAACATTTTTAATGCAAGCATATTAACCTTCTTGTGCTTATGA TR:VR 21:8 5:0 chr14_GL000225v1_random 108381 d_551 A . Too_low_VAF END=109133;SVTYPE=DEL;SVLEN=-752;SVINSLEN=3;SVINSSEQ=CAT TR:VR 241:3 116:1 chr2 112001030 d_911 A . Too_small_size END=112001073;SVTYPE=DEL;SVLEN=-43 TR:VR 23:19 8:0 chr8 139755533 d_1471 G . Too_small_size;Too_low_VAF END=139755509;SVTYPE=INS;SVINSLEN=15;SVINSSEQ=ATGGGGTATAAGGAC TR:VR 64:3 5:0 chr10 133137357 d_348 G . PASS END=133137488;SVTYPE=DEL;SVLEN=-131 TR:VR 13:3 1:0 chr12 131638474 i_265 G . PASS END=131638474;SVTYPE=INS;SVINSLEN=424;SVINSSEQ=GTGGTGAGGGGACAGATGGAGTGGTGGGGGACAGATGAGGGTGGTGAGAGAGAGATGAGGGTGGTGAGGAGAGAGATGAGGGTGGTGAGGAGAGAGATGAGGGTGGTGAGGAGACAGATGAGAGTGGTGAGGGGACAGATGAGGGTGAGGTGAGGAGAGAGATGAGGGTGGTGAGTGGACAGATAAGGGTGGTGAGGGGACAGATGAGAGTGGTGAGGGGACAGATGAGAGTGGTGAGGGGACAGATGAGGGTGGTGAGGAGAGAGATGAGGGTGGTGGGGAGGGAGAGAGATGAGGGTGGTGAGGAGACAGATGAGGGTGGTGAGGAGACAGATGAGAGTGGTGAGGGGACAGATGAGGGTGGTGAGGAGAGAGATGAGGGTGGTGAGTGGACAGATAAGGGTGGTGAGGGGACAGATGAGAG TR:VR 33:6 6:0 chr19 36461413 r_128 G . PASS END=36625654;SVTYPE=DUP;SVLEN=164241 TR:VR 74:4 20:0 chr5 82265686 r_258 T . PASS END=82282503;SVTYPE=DEL;SVLEN=-16817 TR:VR 49:6 15:0 chr8 36672005 r_279 G . PASS END=37223207;SVTYPE=DEL;SVLEN=-551202 TR:VR 98:55 9:0 chr10 97956518 d_342 T . PASS END=97956686;SVTYPE=DEL;SVLEN=-168 TR:VR 22:11 5:0 chr19 36483802 d_781 C . PASS END=36484110;SVTYPE=DEL;SVLEN=-308 TR:VR 36:5 8:0 chr3 177848877 r_238_0 T T]chr3:180564809] . PASS SVTYPE=BND;MATEID=r_238_1 TR:VR 176:15 19:0 chr3 180564809 r_238_1 G G]chr3:177848877] . PASS SVTYPE=BND;MATEID=r_238_0 TR:VR 176:15 19:0 chr3 53002085 d_1110 A . PASS END=53004882;SVTYPE=DEL;SVLEN=-2797;SVINSLEN=87;SVINSSEQ=TGCTGTATCAGTTGTTTTTTTTTTAAGCAGCTCAAAAAATAGCACATATTTTTTTAAGCAGCTCAAAAAATAGCACAATATTGTTGT TR:VR 13:5 7:0 chr4 183850836 i_981 G . PASS END=183850836;SVTYPE=INS;SVINSLEN=389;SVINSSEQ=GATGAGGAAAAAGTGATGAGGGAAAGGATGAAGGAAAGGATGAGAGACCTTCTCCTCCAAGGATGATCAGAAACGATGAGAGAAAGGATGAGAGAAAGGATGAGGGAAAGGATGAGAGAAAGGATGAGGGAAAGGATGAGGGAAAGGATGAGAGAAAGGATGAGGGAAACGATGAGGGAAAGGATGAGGGAAAGGATGAGGGAAAGGATGAGGGAAACGATGAGGGAAAGGATGAGGGAAACGATGAGGGAAAGGATGAGGGAAAGGATGAGGGAAAGGATGAGGGAAAGGATGAGGGAAAGGATGAGAGAAACGATGATGAGGAAAGGATGAGGGAAAGGATGAGAGAAAGGATGAGGGAAACGATGAGGGAAAGGATGAGGGAAACG TR:VR 39:4 4:0 chr6 32410110 r_262 T . PASS END=32410876;SVTYPE=DEL;SVLEN=-766 TR:VR 39:7 4:0 chr8 141429666 i_1276 A . PASS END=141429666;SVTYPE=INS;SVINSLEN=463;SVINSSEQ=GGTCCCCGCTGTAAGGACCAGGTGGCGGGGACAGGGTGAGCGCACAGTCCAGGTCCCCGCTGTAAGGACCAGGTGGCGGGGACAGGGTGAGCGCACAGTCCGGGTCCCCGCTGTAAGGACCAGGTGGCGGGGGCAGGGTGAGCGCACAGTCCGGGTCCCCGCTGTAAGGACCAGGGTGGCGGGGGCAGGGTGAGCGCACAGTCCGGGTCCCCGCTGTAAGGACCAGGTGGCGGGGGGCAGGGTGAGCGCACAGTCCGGGTCCCCGCTGTAAGGACCAGGTGGCGGGGGCAGGGTGAGCGCACAGTCCGGGTCCCCGCTGTAAGGACCCGGTGGCGGGGACAGGGTGAGCGCACAGCCCGGGTCCCCGCTGTAAGGACCCGGTGGCGGGGACAGGGTGAGCGCACAGCCCGGGTCCCCGCTGTAAGGACCCGGTGGCGGGGACAGGGTGAGCGCACAGCCCACG TR:VR 57:17 2:0 chr10 133291295 d_350 C . PASS END=133292399;SVTYPE=DEL;SVLEN=-1104;SVINSLEN=6;SVINSSEQ=GGGAGC TR:VR 25:12 11:0 chr19 36508451 r_129_0 C C[chr8:35870966[ . PASS SVTYPE=BND;MATEID=r_129_1 TR:VR 94:6 11:0 chr8 35870966 r_129_1 T ]chr19:36508451]T . PASS SVTYPE=BND;MATEID=r_129_0 TR:VR 94:6 11:0 chr22 11918966 i_836 A . PASS END=11918966;SVTYPE=INS;SVINSLEN=599;SVINSSEQ=CTGGCCTGTTGGGTTTTTGACTTATATGGGGTCTGTAAGTCCCATCTGTGTTTTGTGTTTCTTTCTGGCAAATTTCTTCCATTTGGCTGGGAATAATTACCCAATGCATGTACAATCATTGTACTTTGGAAGTAGTTAACTTGCTTGGTATTTCAGAGGCTCAGAGGTAGAACATATGGCAGCCTTGTCTCAGACGAGACTTTGGGCTTTGGACATTTCAGTAAATGCTGGAATGAGTTAAGAGATTGGGGAACTGTAGAGAAGGCATCATTGTATTTTGCAGTGTGAGAACAACATGAGATATGGGGGCCAGGATCAGAATAATATGATTTGGCTCTTCATCCTTACCAAACTCGTGTGGAATTGTAATGGGGAATGTTGAAGGTGGGACCTGGTGGGAGGTGATTTAATCATGGAGAAGCATGGGGGTTGGAGGTAAGGGTGTGGAGAGAATGGGGGAGATTATTTTGTGGGTGGGAGTGAAAGATGAGGATGGGGGTGCAGATCCTTCACAAATGGTTAAGCACTCTCTCCTTAATGCTGTTCATATGACCGTGAGTTCTCTTGATGATTTTGGAGCTGTGAGATCGAGTGAATAC TR:VR 5:4 1:0 chr3 110173941 r_191_0 G G]chr3:116049360] . PASS SVTYPE=BND;MATEID=r_191_1 TR:VR 85:57 16:0 chr3 116049360 r_191_1 A A]chr3:110173941] . PASS SVTYPE=BND;MATEID=r_191_0 TR:VR 85:57 16:0 chr3 179248500 r_239_0 G [chr3:181876598[T . Too_low_VAF SVTYPE=BND;MATEID=r_239_1 TR:VR 190:7 14:0 chr3 181876598 r_239_1 T [chr3:179248500[T . Too_low_VAF SVTYPE=BND;MATEID=r_239_0 TR:VR 190:7 14:0 chr5 1072080 i_1054 T . PASS END=1072080;SVTYPE=INS;SVINSLEN=298;SVINSSEQ=GCAGCCCCAGTGAGCCCCCAGTGAGCCCCCAGCACACGGGCATCACACTTATGCAGCCCCAGTGAGCCCCCAGTGAGCCCCCAGCACACGGGCATCACACTTAACGCAGCCCCCAGTGAGCCCCCAGTGAGCCCCCAGCACACGGGCATCACACTTAACGCAGCCCCCAGTGAGCCCCCAGTGAGCCCCCAGCACACGGCATCACACTTAACGCAGCCCCCAGTGAGCCCCCAGCACACGGGCATCACACTTATGCAGCCCCCAGTGAGCCCCCAGCACACGGGCATCACACTTAACG TR:VR 33:9 1:0 chr6 32482254 r_263_0 A A]chr8:46312316] . Too_low_VAF SVTYPE=BND;MATEID=r_263_1 TR:VR 103:3 23:0 chr8 46312316 r_263_1 A A]chr6:32482254] . Too_low_VAF SVTYPE=BND;MATEID=r_263_0 TR:VR 103:3 23:0 chr7 48543164 d_1364 T . PASS END=48553042;SVTYPE=DEL;SVLEN=-9878;SVINSLEN=15;SVINSSEQ=ATTTGTGGGAAAGTC TR:VR 37:6 10:0 chr8 38395220 r_280_0 A A]chr8:38398073] . PASS SVTYPE=BND;MATEID=r_280_1 TR:VR 83:20 13:0 chr8 38398073 r_280_1 G G]chr8:38395220] . PASS SVTYPE=BND;MATEID=r_280_0 TR:VR 83:20 13:0 chr1 248383968 i_107 T . PASS END=248383968;SVTYPE=INS;SVINSLEN=139;SVINSSEQ=CCTATCCTGAAGTGTTTCCTAATGTTATTGTCATGGGTAAAGCACTGCACTAGCCTGAGTGTGCTCATCCTATCCTGATGTGTTTCCTAGTGTTATCGTCATGGAGAAAGCACCTGCACTAGCCTGAGTGTGCTCATCC TR:VR 46:7 7:0 chr11 106332229 i_215 T . Too_small_size END=106332229;SVTYPE=INS;SVINSLEN=44;SVINSSEQ=TTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCTTTCTTTCTTTCT TR:VR 35:6 3:0 chr17 13944173 d_695 C . PASS END=13946190;SVTYPE=DEL;SVLEN=-2017 TR:VR 16:5 9:0 chr19 36616148 d_782 G . PASS END=36616275;SVTYPE=DEL;SVLEN=-127 TR:VR 37:5 7:0 chr3 70915904 r_171 T . PASS END=71450010;SVTYPE=DEL;SVLEN=-534106;SVINSLEN=1;SVINSSEQ=A TR:VR 25:16 17:0 chr4 42682233 d_1153 C . PASS END=42682290;SVTYPE=DEL;SVLEN=-57 TR:VR 19:5 8:0 chr6 32485554 r_264_0 G [chr6:32487364[C . PASS SVTYPE=BND;MATEID=r_264_1 TR:VR 55:4 28:0 chr6 32487364 r_264_1 C [chr6:32485554[C . PASS SVTYPE=BND;MATEID=r_264_0 TR:VR 55:4 28:0 chr1 248465249 i_108 T . PASS END=248465257;SVTYPE=INS;SVINSLEN=162;SVINSSEQ=CTTTATTCTACTATTTCCCAAAATATACCCAATTACTGGCAAAAAATGTTATTATTAAACTGATGAGAAAATATAAAGGTTTATTACTGGATTAAATAAGTTTTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA TR:VR 88:34 9:0 chr14_GL000225v1_random 71181 i_324 C . PASS END=71192;SVTYPE=INS;SVINSLEN=362;SVINSSEQ=TGCCCAACAGGGCATTGTGACATATCTCTGCACTGATCACCGAGGTGATTCAACTCTTGGCCAGGTCTCTGCCTACTGGGGACATTGTGACATATCTCTGCACTGATTTACTAGTTACTGTAATCTTTAATCTAAGCTCTGCCTACAGTCAATGTGACCACATATCACTGCACTGATCACAAAGGTGATATAACTCTTGCCCTGAGCACTACCTAAAGGGGACATGTGACATATATCTGCACTGATCAACCAGGGTGATATAACTCATAGCCTAGGATCTGCCTCTAGGGGACATTGTGACATGCTCGCTTCACTGATCACCCAGGTGATGGAACTCATTGTCTTGGCTTGCCCTACAGATG TR:VR 563:37 204:0 chr17 14129699 r_107_0 A [chr17:14193414[T . PASS SVTYPE=BND;MATEID=r_107_1 TR:VR 69:22 9:0 chr17 14193414 r_107_1 T [chr17:14129699[T . PASS SVTYPE=BND;MATEID=r_107_0 TR:VR 69:22 9:0 chr19 36704048 r_130_0 G G]chr19:47105356] . PASS SVTYPE=BND;MATEID=r_130_1 TR:VR 46:16 13:0 chr19 47105356 r_130_1 T T]chr19:36704048] . PASS SVTYPE=BND;MATEID=r_130_0 TR:VR 46:16 13:0 chr20 31080096 i_760 A . Too_low_VAF END=31080116;SVTYPE=INS;SVINSLEN=66;SVINSSEQ=ATCAACCCGTGTGGAATGTAATGCAAAGGAATGGAATGGAATGGAATGGAATCAACAAAAGTGTAA TR:VR 318:11 10:0 chr22 11922320 i_837 T . PASS END=11922320;SVTYPE=INS;SVINSLEN=331;SVINSSEQ=CAGTCACTGGGGGGCAGTAGAGAAGTCATCAATGTATTTTGCAGTGTGACAAGGATACAAGATTTGGGGAGCAAGAGTCAGAATAATATGATTTGATTCTGTGTCCCTAACAATACTCATGTGGAATTGTAGTGGGGAATGTTAAAGGTGGGACCTGGTGGGAGGTGATTTAATCATGGAGAACAGCGGGTGTTGGAGGTAGGGGTGTGGGGAGAATGGGAGAGATTATTTTGTGGGTGGGAGTGAAAGATGAGAGTGGGGGGGCAGATCCTTCACAAATGGGTAAACACTATCTCCTTAATTCTGTCCGCATGACAGTGAGTTCTCTTGA TR:VR 4:4 4:0 chr3 112549293 r_192_0 T T]chr3:141706744] . PASS SVTYPE=BND;MATEID=r_192_1 TR:VR 44:11 16:0 chr3 141706744 r_192_1 A A]chr3:112549293] . PASS SVTYPE=BND;MATEID=r_192_0 TR:VR 44:11 16:0 chr3 75669597 r_172_0 G GTT[chrY:11309246[ . Too_low_VAF SVTYPE=BND;MATEID=r_172_1;SVINSLEN=2;SVINSSEQ=TT TR:VR 524:4 228:1 chrY 11309246 r_172_1 G ]chr3:75669597]AAG . Too_low_VAF SVTYPE=BND;MATEID=r_172_0;SVINSLEN=2;SVINSSEQ=AA TR:VR 524:4 228:1 chr4 184676696 i_984 C . PASS END=184676696;SVTYPE=INS;SVINSLEN=197;SVINSSEQ=CTTCCCTTCTCCCTTCCCCCTTCCCTTCTCCCCTCCCTTCTCCCTTCCCCTCTCCCTTCCCCCTTCCCTTCCCCCTTCCCTTTCCTTATCCCTTCCCTTTCTTCTCCCTTCCCCCATCCCTTCCCTTCCCCTTCCCTTCCCCCTTCCCTTTCCTCTCCCTTCCCTCTCCCTTCCCTTCCCCCTTCCCTTTCCTTCTC TR:VR 42:32 3:0 chrUn_KI270589v1 10558 i_1368 C . PASS END=10559;SVTYPE=INS;SVINSLEN=1542;SVINSSEQ=ATAGGCCTCCAAGTACTCCAAATGTCCACTTGCAGATTCTACAAAAAGAGAGTTTCAAAACTGCTCAATCAAAAGAAAGGTTTAACTCTGTGGGATGAATGCACACATCTCAAAGAAGTTTCTCACATTGCTACTGTCTAGGTTTTACGTGAAGATTTTTCCTTTTCTACCATAGGCCACAAAGCACTCCAAATGTCCAGTTGCAGATTCTACAAAAAGAGTGTTTCCAAACTGCTCAATTGAAGGAAAGGTTCAACTTTGTCAGATGAACACACACATCACAAAGGAGTTTCTCAGAATTCTTCTGCCTATTTTTTATTTTAAGATACTTCCTTTTCCACCATGGCCTCAAAGCACTCCAAATGTCCACTTGCGGATTCTACAAAAATAGTGTCTGCATACTGCTCAATCAAAAGAAAGTTTCAACTCCATGAGAGGAATGCACACAACACAAAGCAGTTTCTCAGAATTCTTCTGTCTTGTTTTTATGTTAAGGTATTTCCTTTTCCACCATACACCTCAAAGTACTCCAAATGTCTGCTTGTGGCTTCTTCAAAAAGAGAGTTTCCAAACTGCTCAATCAAAAAAAAGGTTTAACTCTGTGAGTTGAATGCACACATCTCAAAGAAGTTTCTCAGATTGTTTCTGCCTAGATTTTATGTGAAGATATTTTTTTTTTACTACCATAGGCTGCAAAGCACTCCACATATCCAATTGCAGATTCTACAAAAAGAGTGTTTCCAAACTGCTCAGTCAAAGGAAAGTTCTACTCTGTGAGATGAATGCAAACATCACCAAGAAGTTTCTCAGAATTCTTCTGCCTAGTTTTTATGTTAAGATATTTCCTTTTCCACCATGGTCCTCAAAGTGCTCCAAATGTAAACTTGCAGACTCTACAAAAAGAGAGCTTTGAATCTCCTCAATCAAAAGAAAGTTTTAACTCTCTGAGGTTAACGCACACATCACAAAGGAGTTTCTCAGATTGCTTCTGTCTAGATGTTATGTGAAGATCTTACCTTTTCTGACATAGGCCGCAAAGCGCTCTAAATGTCCACTTGCAGATTCTGCTAAAAGAATGTTTCCAAAATGCTGAATCAAAAGAAAGGTTCAACTCGGTGAGATGTACCTACAATTAACAGGGAAGTTTCTCAGAATTCTTCTATATAGTATTTATGTGAAGATATTTCCTTTTCCACCATAGTCCTCAAAGAGCTCCCAAATGTCCACTTGCATATTCTACAGAAAGAGAGCCTGAAAACTCCTCAATGAAAAGAAATATTTAACACTGTGACATAAGTGCACACATCACAAAGTAGTTTCTCAGATTGCTTCTGTCTAGATTTTATGTGAAGGTATTCCCTTTTCTAACATAGGCCACAAGGTGCTCCAAATGTCCACTTGGAGATTCTACTAAAAGAGTGTTTCCAAACTGCTCTATCAAAAGTAAGGTTCAACTCTGTGACATGAACGCACACATCACAAAGAAGTTTCTCAGAATTCTTCTTTCTAGTATTTATGTGATGATATTTCCTTTTCCACCAT TR:VR 15:5 7:0 chrY 56837657 i_1422 G . Too_low_VAF END=56837657;SVTYPE=INS;SVINSLEN=84;SVINSSEQ=CACTGATATATACTTGATGTACCTTCATATTTCATGTACAGTATATAATACATACTTTGGGTACTTTGATATTTTATGTACATA TR:VR 250:7 88:0 chr11 54925060 i_202 T . PASS END=54925060;SVTYPE=INS;SVINSLEN=174;SVINSSEQ=CTAATCTTTATCCTAGTATATACATCTTTTTCACCATGGGCCTCAATGAGTTCCCAAATATCCATTGCAAGAATGCACAAAAACAGGGTTTCGATAATACTGAATCCAAAGAAAGATTTAACTCTGTGAGATGAATGAACACATCTCTAACTAGGTTCTCAGACAGCCTCTTAC TR:VR 44:3 14:0 chr14_GL000225v1_random 71263 r_95 G . Too_low_VAF END=80855;SVTYPE=DEL;SVLEN=-9592;SVINSLEN=5;SVINSSEQ=CTTTG TR:VR 712:10 286:0 chr2 90382038 i_577 G . Too_low_VAF END=90382038;SVTYPE=INS;SVINSLEN=216;SVINSSEQ=CAATCATCATCAAATGGAATCGAATGGAATCATCATCAAATAGAATCGAATGGAATCATCAAATGGAATCGAATGGAGTCATTTTCTAATGCAATCGAATGAAATCATAGAATGGAATCCCATGGAATCAACATCGAATGGAATCGATTGGAATCATTATCAAATAGAATTGAATGGAATCACTGAATGGAATCATCATCAAATGGACTCCAACGG TR:VR 411:6 46:1 chr22 11922671 i_838 A . PASS END=11922671;SVTYPE=INS;SVINSLEN=230;SVINSSEQ=AGGAAAAGGAGGGGTAGTGTGGGGAGGAGTAGGTTGTCAGTAGGGTGGTGGGAGAGTGGGAGTAACCTGCTGCAGAGGCAGAGGCTCATGGGAAACCTCTACTAGGACAGTGCACCTGTGGCTTTGCAGGGTGTAGCCCCCATGGCTGCTCTCATGGGCTGGGTTGGTGTTGAGTGCCTGTAGCTTTTCCATACTGAGGGTGTGAGCTGTTGGTGGGCTTACAAATCTGG TR:VR 4:4 4:0 chr3 113513809 r_193_0 C [chr3:148770738[A . PASS SVTYPE=BND;MATEID=r_193_1 TR:VR 114:28 10:0 chr3 148770738 r_193_1 A [chr3:113513809[A . PASS SVTYPE=BND;MATEID=r_193_0 TR:VR 114:28 10:0 chr3 81879244 r_173_0 G G]chr3:185972868] . PASS SVTYPE=BND;MATEID=r_173_1 TR:VR 87:41 12:0 chr3 185972868 r_173_1 C C]chr3:81879244] . PASS SVTYPE=BND;MATEID=r_173_0 TR:VR 87:41 12:0 chr5 36956781 r_252 T . PASS END=37052950;SVTYPE=DUP;SVLEN=96169 TR:VR 67:11 8:0 chr13 100539563 r_73_0 A [chr3:84106065[A . PASS SVTYPE=BND;MATEID=r_73_1 TR:VR 82:35 12:0 chr3 84106065 r_73_1 A [chr13:100539563[A . PASS SVTYPE=BND;MATEID=r_73_0 TR:VR 82:35 12:0 chr17 14417239 r_108_0 A A[chr9:42242969[ . PASS SVTYPE=BND;MATEID=r_108_1 TR:VR 79:5 15:0 chr9 42242969 r_108_1 T ]chr17:14417239]T . PASS SVTYPE=BND;MATEID=r_108_0 TR:VR 79:5 15:0 chr19 42870690 d_783 G . PASS END=42870774;SVTYPE=DEL;SVLEN=-84 TR:VR 33:7 11:0 chr21 18684482 r_160 G . PASS END=18708709;SVTYPE=DUP;SVLEN=24227 TR:VR 65:23 12:0 chr3 84347642 r_174_0 C [chr3:95073953[G . PASS SVTYPE=BND;MATEID=r_174_1 TR:VR 119:12 11:0 chr3 95073953 r_174_1 G [chr3:84347642[G . PASS SVTYPE=BND;MATEID=r_174_0 TR:VR 119:12 11:0 chr5 37024532 d_1241 T . PASS END=37024591;SVTYPE=DEL;SVLEN=-59 TR:VR 33:3 6:0 chr8 142429621 i_1279 C . Too_small_size END=142429621;SVTYPE=INS;SVINSLEN=17;SVINSSEQ=ATCCATCCACCCATCTA TR:VR 55:10 3:0 chr13 100621304 r_74_0 G [chr3:84908774[T . PASS SVTYPE=BND;MATEID=r_74_1 TR:VR 44:5 10:0 chr3 84908774 r_74_1 T [chr13:100621304[T . PASS SVTYPE=BND;MATEID=r_74_0 TR:VR 44:5 10:0 chr19 43151105 r_131_0 T [chr19:43152703[G . PASS SVTYPE=BND;MATEID=r_131_1 TR:VR 60:26 2:0 chr19 43152703 r_131_1 G [chr19:43151105[G . PASS SVTYPE=BND;MATEID=r_131_0 TR:VR 60:26 2:0 chr3 113762617 r_194_0 G [chr3:114189854[T . Too_low_VAF SVTYPE=BND;MATEID=r_194_1 TR:VR 138:3 13:0 chr3 114189854 r_194_1 T [chr3:113762617[T . Too_low_VAF SVTYPE=BND;MATEID=r_194_0 TR:VR 138:3 13:0 chr3 84347738 r_175_0 C C]chr3:109291908] . PASS SVTYPE=BND;MATEID=r_175_1 TR:VR 171:13 9:0 chr3 109291908 r_175_1 T T]chr3:84347738] . PASS SVTYPE=BND;MATEID=r_175_0 TR:VR 171:13 9:0 chr5 37483093 r_253 T . PASS END=37484593;SVTYPE=DEL;SVLEN=-1500 TR:VR 49:8 12:0 chr1 2281195 d_4 G . PASS END=2281347;SVTYPE=DEL;SVLEN=-152;SVINSLEN=44;SVINSSEQ=ATCTTCATAGAGAGGTGGCGGAGATCTTCAGAGAGAAGACACGT TR:VR 23:8 3:0 chr13 101378993 r_75_0 T T]chr3:5211315] . PASS SVTYPE=BND;MATEID=r_75_1 TR:VR 40:3 16:0 chr3 5211315 r_75_1 T T]chr13:101378993] . PASS SVTYPE=BND;MATEID=r_75_0 TR:VR 40:3 16:0 chr17 14763798 r_109_0 C CA]chr17:14777462] . PASS SVTYPE=BND;MATEID=r_109_1;SVINSLEN=1;SVINSSEQ=A TR:VR 31:4 19:0 chr17 14777462 r_109_1 G GT]chr17:14763798] . PASS SVTYPE=BND;MATEID=r_109_0;SVINSLEN=1;SVINSSEQ=T TR:VR 31:4 19:0 chr3 113791454 r_195 C . PASS END=179053656;SVTYPE=DEL;SVLEN=-65262202 TR:VR 161:24 12:0 chr3 84845166 r_176 A . PASS END=84846417;SVTYPE=DUP;SVLEN=1251;SVINSLEN=1;SVINSSEQ=T TR:VR 83:18 17:0 chr5 91592540 i_1093 A . PASS END=91592555;SVTYPE=INS;SVINSLEN=144;SVINSSEQ=ATACCAGGTTAGGGCCTCTTGTGTGCATTAAGAGTGGCAAGATAAAATGGAGAGAAATAATACAGTTGACTGAGAAGCAAAACCCTTTTTCCAGAAAAACAAGATCCAAGAAGTAAACACAAAGGCGTTTTAAATATACCTATA TR:VR 35:6 7:0 chr7 1136379 i_1182 A . PASS END=1136379;SVTYPE=INS;SVINSLEN=60;SVINSSEQ=ATATATACATATATAAATATATATAAACATATATAATATATATATAAACATATATAAATA TR:VR 18:3 2:0 chr1 146783422 r_12_0 A A[chr3:180523040[ . Too_low_VAF SVTYPE=BND;MATEID=r_12_1 TR:VR 132:4 15:0 chr3 180523040 r_12_1 A ]chr1:146783422]A . Too_low_VAF SVTYPE=BND;MATEID=r_12_0 TR:VR 132:4 15:0 chr11 119031480 d_382 G . PASS END=119033481;SVTYPE=DEL;SVLEN=-2001 TR:VR 31:6 4:0 chr13 104495606 i_279 T . Too_small_size END=104495606;SVTYPE=INS;SVINSLEN=44;SVINSSEQ=TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT TR:VR 22:15 3:0 chr14_GL000225v1_random 115842 d_558 A . Too_small_size;Too_low_VAF END=115824;SVTYPE=INS;SVINSLEN=49;SVINSSEQ=AATTAACTTTGTGACATAACCCTGTACTGATCATCCAGGTGATGGGGCT TR:VR 562:19 158:1 chr3 114189665 r_196 G . PASS END=118534611;SVTYPE=DEL;SVLEN=-4344946 TR:VR 77:7 11:0 chr3 84846238 r_177_0 A A]chr3:186186855] . PASS SVTYPE=BND;MATEID=r_177_1 TR:VR 62:6 22:0 chr3 186186855 r_177_1 A A]chr3:84846238] . PASS SVTYPE=BND;MATEID=r_177_0 TR:VR 62:6 22:0 chr5 91592874 d_1274 T . PASS END=91592943;SVTYPE=DEL;SVLEN=-69;SVINSLEN=1;SVINSSEQ=A TR:VR 34:5 7:0 chr7 56811041 i_1191 G . PASS END=56811041;SVTYPE=INS;SVINSLEN=723;SVINSSEQ=ACGGAGGAGCTGGGCCGCACACAGGCTGCTGGGAGGCAGGCAGGGACTTGGTCCCGGGAGGCCGCCGTGAGGCCAGAGCTGGGCCTGGAGACGCCCCTGGGAGGCAAGAGCGGGGCCTGCAGAGGCTGTTCTCCAGCCAGACCTGGGCCTGTACAGGCCACCGGGAGGCAGGAGGTGGGACTGAGGAGCTTGCTGGAGAAAGTTCAGGGTCTACAAAAGCCGGCGGGAGCTGGGCAGGAGCTGAGCCAAAAGAGCTTGCTTGCTGGGAGGCCGGAGCTGGGCCTGGAGAGGCTGACTTCAGGACCACTTGAGCCTGCAGAGGCCGCCGGGAGGCCCAAGCTGGGCCTGGAGAAGCCCACCGACCCGAGGCCATTTGGGGCCTGGAGACGCCGTCGGAGGGCAGGAGCTGAGCCTGGAGAGGCCACCGTGAGGCCTGAGCTGGGCCCGGGGAGCTTGGCTTCAGGAAGCTGTGGGCTGACCAAGGCCACCAGGGAGCTGGGCAGGCACTGAGTCCAAAGAGGTTGTTGGGAGGCAGGAGTCGGGCCTGCAGACGCAGCCGGGAGGAAGAGCTGGGCCCGGAGAGGACGCCGGGAGGCTGCAAGTGGGTCTGGAGAGGCCGACTTGAGGAGCTTCTGGGCCCGGAGAGGCCGCCGGAAGGAAAAACTGGGCCTGGAAAGGCCGTTGTGAGGAATGAGCCCCATGGGCCTGAAGAGGCCACTGGCA TR:VR 48:4 9:0 chrUn_KI270747v1 68129 d_1564 C . PASS END=68250;SVTYPE=DEL;SVLEN=-121 TR:VR 52:5 6:0 chr1 146903878 r_13_0 T [chr1:153523627[T . Too_low_VAF SVTYPE=BND;MATEID=r_13_1 TR:VR 112:5 19:0 chr1 153523627 r_13_1 T [chr1:146903878[T . Too_low_VAF SVTYPE=BND;MATEID=r_13_0 TR:VR 112:5 19:0 chr10 15915311 r_25_0 T ]chr2:90371366]TTTTT . Too_low_VAF SVTYPE=BND;MATEID=r_25_1;SVINSLEN=4;SVINSSEQ=TTTT TR:VR 120:5 19:0 chr2 90371366 r_25_1 T TAAAA[chr10:15915311[ . Too_low_VAF SVTYPE=BND;MATEID=r_25_0;SVINSLEN=4;SVINSSEQ=AAAA TR:VR 120:5 19:0 chr20 28806862 d_975 T . Too_low_VAF END=28806948;SVTYPE=INS;SVINSLEN=268;SVINSSEQ=CCTTCTGCGTAGTTTTTATATGAATATATTTTCTTTTCCACTGTAGGCCTCAAAGCGCTCCAAATATCCACTGGTGGATTCTACAAAAAGATAGATTCAAAGCTGCTCAATCAAAAGAATGGTTCAACTCTGTGGTAAGATAGATTCTACTCTGTGAGACGAATGCACAATTTACAAAGAAGTTTCTCAGAATGCTTCTGTGTAGTTTATATTTAAAGATAACTTCTTTTCCTAAAGAGCATCAAATATCCAATTGCAGATTCTACAA TR:VR 148:7 50:0 chr22 12532203 d_1072 T . PASS END=12532656;SVTYPE=DEL;SVLEN=-453;SVINSLEN=61;SVINSSEQ=TGAAACACTCTTTTTGTTGTATATGCAAGTGGGTATTTGGAGCGATTTGTGGTCTATGGTG TR:VR 45:3 23:0 chr3 114638005 r_197 C . PASS END=118942681;SVTYPE=DEL;SVLEN=-4304676 TR:VR 68:6 12:0 chr3 85444229 r_178_0 C [chr3:85648254[A . PASS SVTYPE=BND;MATEID=r_178_1 TR:VR 57:9 9:0 chr3 85648254 r_178_1 A [chr3:85444229[A . PASS SVTYPE=BND;MATEID=r_178_0 TR:VR 57:9 9:0 chr6 32578444 i_1130 G . PASS END=32578444;SVTYPE=INS;SVINSLEN=319;SVINSSEQ=GGCCACGAGCGGTGGCTCATGAGTGTGGTCCCAGCACTTTGGGAGGCCAAGGTGGGTGGATCACCAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAATCCCATCTTTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGTGGGTGCCTGCAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGTCTTGAACCCGGGAGGCAGAGTTTGCAGTGAGCCGAGATCGCACCACTGCACTCCAGCCTGAGCAACAGAGGGTGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAGTTTTGATGTA TR:VR 44:16 4:0 chr1 146930621 r_14 G . Too_low_VAF END=147038225;SVTYPE=DEL;SVLEN=-107604 TR:VR 120:3 7:0 chr10 21430550 d_259 C . PASS END=21430542;SVTYPE=INS;SVINSLEN=169;SVINSSEQ=GCCCCGTCTGGGAGGTGAGGGGCGCCTCTGCCCGGCTGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGTGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCTGCCC TR:VR 23:5 5:0 chr11 54940937 d_372 T . PASS END=54941041;SVTYPE=DEL;SVLEN=-104;SVINSLEN=100;SVINSSEQ=CACCATTGGCCTCAAATCGCTCCCAAATATAACTGTGCATATTTTAGAAAAACAGTGTTTCCAAACTGCTGAATGAAAAGAAGGCCTAACTCTGAGATGA TR:VR 41:7 6:0 chr19 43846618 r_134_0 T [chr19:43854886[T . PASS SVTYPE=BND;MATEID=r_134_1 TR:VR 94:17 14:0 chr19 43854886 r_134_1 T [chr19:43846618[T . PASS SVTYPE=BND;MATEID=r_134_0 TR:VR 94:17 14:0 chr2 90382715 d_847 G . Too_low_VAF END=90382783;SVTYPE=INS;SVINSLEN=70;SVINSSEQ=AAGTCATCGAATGGACACGAATGGAATGAACAAATGGACTCGAATGGAAACATCAAATGGAATCGAATGG TR:VR 427:7 52:1 chr22 12616968 d_1073 G . PASS END=12617089;SVTYPE=DEL;SVLEN=-121 TR:VR 35:5 12:0 chr3 85720542 r_179_0 T [chr3:105367529[A . PASS SVTYPE=BND;MATEID=r_179_1 TR:VR 84:12 10:0 chr3 105367529 r_179_1 A [chr3:85720542[A . PASS SVTYPE=BND;MATEID=r_179_0 TR:VR 84:12 10:0 chr5 98807346 d_1276 G . PASS END=98808093;SVTYPE=DEL;SVLEN=-747 TR:VR 40:9 8:0 chr1 146959580 r_15_0 A [chr1:147127861[CT . Too_low_VAF SVTYPE=BND;MATEID=r_15_1;SVINSLEN=1;SVINSSEQ=C TR:VR 88:3 12:0 chr1 147127861 r_15_1 T [chr1:146959580[GT . Too_low_VAF SVTYPE=BND;MATEID=r_15_0;SVINSLEN=1;SVINSSEQ=G TR:VR 88:3 12:0 chr1 230335108 d_212 C . Too_low_VAF END=230335573;SVTYPE=DEL;SVLEN=-465;SVINSLEN=93;SVINSSEQ=AGATACACAGATACAGACACATACACATACATACACAGGTACACATACAGACACACACAGACACACAGACACACAGACTTACAGACACACACA TR:VR 64:3 8:0 chr19 43870524 r_135_0 A A[chr7:112326801[ . PASS SVTYPE=BND;MATEID=r_135_1 TR:VR 126:35 11:0 chr7 112326801 r_135_1 C ]chr19:43870524]C . PASS SVTYPE=BND;MATEID=r_135_0 TR:VR 126:35 11:0 chr2 124656244 i_682 T . PASS END=124656244;SVTYPE=INS;SVINSLEN=521;SVINSSEQ=CAAACCAAGCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAGATATTAAAGTCTTTATTTGCCCCCCCCCATTTTTATTTTCAGTAATACAGGGTAAAATGAGTAGGATTACTTGATCTGGCCATCTATGGCCATTTTATGGAATGACAAACTAAGTTCAATACTGATAGAGTTGTATTCTGTGTATACATATAATAGAGTATATACTGTGTGTATAAAAAATTCAAGCATATGGAAAAACTTATTTAATCCAGTAATAAACCTTTATATTTTCTCATCAGTTTAATAATAACATTTTTTGCCAGTAATTGGGTATATTTTGGGAAATAGTAGAATAAAGATTTGTAGACTTATAATCCAATTTAAATGTAAGTTCAAATACCTTAACATGTTCACATTACTTTTTTAATTCACAAAAACGTTCTTATCTATCTTTATTTTAAGATGTTTTCCACATACATGCTTAGTGAATTTTCTTTTAGGAGATGTAAGAGAGTCTAC TR:VR 16:8 9:0 chr20 28808995 d_977 A . Too_low_VAF END=28809252;SVTYPE=DEL;SVLEN=-257;SVINSLEN=93;SVINSSEQ=GCGTTTCAAATCTGCTCAATCAAAATAAATGTTAAAATCTGTGTGGTGAATGCACAGATCAAAAAGAACTCTCTCAGAATGCGTACGTGTAGT TR:VR 154:5 42:1 chr20 38895792 i_765 T . PASS END=38895792;SVTYPE=INS;SVINSLEN=196;SVINSSEQ=TCCTTCCTTCTTTCTTCCCTCCCTCCCTCCTTCCTTCTTTCTCTCCCTCCCTCCCTCCTTCCTTCTTTCTCTCCTCCCTTCCTCCCTTCCTTCTTTCTCTCCTCCCTTCCTCCTTCCTTCTTCCTTCCCTCCCTCCCTCCCTTCCTTCTTTCTTCCCTCCCTCCCTCCTTCCCTTCTTTCTTCCCTCCCTCCCTCC TR:VR 44:9 4:0 chr3 115747775 d_1119 A . PASS END=115747866;SVTYPE=DEL;SVLEN=-91;SVINSLEN=3;SVINSSEQ=TTA TR:VR 81:9 6:0 chr3 86423958 r_180 T . PASS END=186170109;SVTYPE=DEL;SVLEN=-99746151 TR:VR 60:18 15:0 chr5 42872217 d_1244 C . PASS END=42872325;SVTYPE=DEL;SVLEN=-108;SVINSLEN=11;SVINSSEQ=TCACGCCTCCA TR:VR 36:21 3:0 chr6 32586190 r_267_0 C [chr8:46310528[A . PASS SVTYPE=BND;MATEID=r_267_1 TR:VR 93:6 19:0 chr8 46310528 r_267_1 A [chr6:32586190[A . PASS SVTYPE=BND;MATEID=r_267_0 TR:VR 93:6 19:0 chrX 31465582 i_1398 C . PASS END=31465583;SVTYPE=INS;SVINSLEN=165;SVINSSEQ=ATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGTTATTGTGAATAATGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAGTCCTTTGGGCATATACCCAGTAATGGGATGGCTGGGTCAAATCCT TR:VR 17:3 7:0 chr1 146968149 r_16 C . Too_low_VAF END=147067601;SVTYPE=DUP;SVLEN=99452 TR:VR 120:4 10:0 chr11 55039407 i_204 C . PASS END=55039410;SVTYPE=INS;SVINSLEN=215;SVINSSEQ=AAAAGTCCATTCACAGAATGGACAAAAACAGTATTTCCAAACAGCTGAATCTAAAGAAAGGTTTTACTCTCTGAGATGAAAGCACACATCCCAAACCTGTTACTCATTAAGCTTCTTTCTTTTTTTAATCCGAAGGTATTACATTTTTCACCAGAAGTCTCCATATTCTTCCAAATATCTCTTTGCAGATTCTAAGGAAACAGTATTTCCAAACT TR:VR 37:9 9:0 chr19 44259510 r_136_0 T T]chr7:112326961] . PASS SVTYPE=BND;MATEID=r_136_1 TR:VR 107:35 14:0 chr7 112326961 r_136_1 A A]chr19:44259510] . PASS SVTYPE=BND;MATEID=r_136_0 TR:VR 107:35 14:0 chr2 91504963 i_674 T . Too_low_VAF END=91504964;SVTYPE=INS;SVINSLEN=648;SVINSSEQ=GGCTGGCCTGGCTGGGTTGATGGCTAGCTGGCTTGGCTTGGCTGGTTGGCTGGCTTGGCTTGGCTGGCTTGGCTGGCTGGCTGGCTGCTTGGCTGGCTTGGCTGGCTGGCTGGCTTGGCTGGTTGGCTGGATTTTGGCCGGCTTGGCTGGCTTGGCTGGCTGGGTGGCTTGGCTGGCTTGGCTGGCCGGCTGGCTTGGCTGGCTGGCTGGCTTGGCTGGCATGGCTGGCTTGGCTGGCTGGCTGGCTTGGCTGGCTTGGCTGCCTGGCTGGCTTGGCTGGCTTGGCTGGCTTGGCTGGCTGTCGGGCGCTGACTGGCTTGGCTGGCAGCTGCCTGGCTGGCTGGCAGGCTGGCCTGGCTGGCTGGGTGGCTGGCCTGCTTGGCTGGCTGGGTGGCTGGCTGGCCTGGCTGGCTGATTGGCTTGGCTGGCTTGGCTGGCTGGCTGGCGTGGCTGGCTTGGCTGGCTGGCTAGGTGGCTTGGCTGGCTTGGCTGGCTGGGAGGCTTGGCTGGCTGGGTGGCTGGCTGGCTTGGCTGGCTTGGCTGGCTGGGCTGGCTTGGCTGGCTGGCTGGCTTGGCTGGCTGATTGGCTTGGCTGGCTTGGCTGGCTGGGTGGCTTGGCTGGCTGGGTGGCTTGGCTGGTTTGGCTTG TR:VR 106:5 21:0 chr3 115760973 r_198 G . PASS END=172072410;SVTYPE=DEL;SVLEN=-56311437 TR:VR 104:29 13:0 chr5 44510228 r_254 C . PASS END=44678066;SVTYPE=DUP;SVLEN=167838 TR:VR 48:7 19:0 chrX 31466327 i_1399 T . Too_small_size END=31466327;SVTYPE=INS;SVINSLEN=41;SVINSSEQ=TTAATTAAAGATTTTAATTTTAATTAAAAAATTAAATCTGT TR:VR 19:5 8:0 chr12 13899389 d_408 G . PASS END=13899879;SVTYPE=DEL;SVLEN=-490 TR:VR 33:32 2:0 chr17 21842528 d_697 C . PASS END=21842703;SVTYPE=DEL;SVLEN=-175;SVINSLEN=113;SVINSSEQ=GAACTTTTGCCGCCGTTTTTTCCCCTGCCGCCGCGGCTTTTTGCAGCTTTTTGTCCCCGCCACCATGGGTTTTGCCGATGCGGCTTTTGACCCCCACCGCCAGGGCTTTTGTT TR:VR 29:14 8:0 chr3 115837457 r_199_0 A [chr3:143659871[A . PASS SVTYPE=BND;MATEID=r_199_1 TR:VR 97:5 7:0 chr3 143659871 r_199_1 A [chr3:115837457[A . PASS SVTYPE=BND;MATEID=r_199_0 TR:VR 97:5 7:0 chr5 12105822 r_249_0 A A]chr5:123476970] . PASS SVTYPE=BND;MATEID=r_249_1 TR:VR 62:6 14:0 chr5 123476970 r_249_1 T T]chr5:12105822] . PASS SVTYPE=BND;MATEID=r_249_0 TR:VR 62:6 14:0 chr7 61066668 i_1195 A . PASS END=61066668;SVTYPE=INS;SVINSLEN=387;SVINSSEQ=TCAAATAGAATCGAATTGAATCACTCAATGGACTCGAATGGAATCTTCATCAAATGGAGTTGAATGGAATAATCTAATGGACTCGAAAAGAATCATCATCGAATTAAATTGAAAGTAATCACCGAATGGACACGAATGGAATCATCATAGAATAGAATCGAATGGCATCAACAAATTGACTCAAATTGAATATAATCAAATTGAATCAAAAGCAATCATCGAATGGACTCAAATGGAATTATCGAATGGACTCAAATGGAATCATCAATTGGACCCAAATGGAGTTATCAAGTGGGCTCGAATGGAAACATCAAATGGACTTCAAATGGAATCATTATCAAATGGATCCAAATGGAATCATCGAATTGAATCGAATGGAATCATCGA TR:VR 44:11 8:0 chrX 328773 d_1577 C . PASS END=328845;SVTYPE=DEL;SVLEN=-72 TR:VR 23:8 5:0 chr1 147031735 r_17_0 C C]chr3:181874627] . PASS SVTYPE=BND;MATEID=r_17_1 TR:VR 149:8 6:0 chr3 181874627 r_17_1 T T]chr1:147031735] . PASS SVTYPE=BND;MATEID=r_17_0 TR:VR 149:8 6:0 chr1 248945480 d_246 T . Too_low_VAF END=248945548;SVTYPE=DEL;SVLEN=-68;SVINSLEN=1;SVINSSEQ=T TR:VR 163:7 10:0 chr14 16121741 r_76_0 A [chr14_KI270725v1_random:144466[TTTATGGTTTTTCTGTGAAGATATTTCCTTTTTCAACATAGGCCTCAAAGACCTCACAAATATCCCTTTGCAGATTCTACAAAAAGACTGTTTCCAAACCGCTCAATAAAAAGAATTATTGAACACTCACCTCTTTGTGATGAT . PASS SVTYPE=BND;MATEID=r_76_1;SVINSLEN=143;SVINSSEQ=TTTATGGTTTTTCTGTGAAGATATTTCCTTTTTCAACATAGGCCTCAAAGACCTCACAAATATCCCTTTGCAGATTCTACAAAAAGACTGTTTCCAAACCGCTCAATAAAAAGAATTATTGAACACTCACCTCTTTGTGATGA TR:VR 31:6 29:0 chr14_KI270725v1_random 144466 r_76_1 T [chr14:16121741[TCATCACAAAGAGGTGAGTGTTCAATAATTCTTTTTATTGAGCGGTTTGGAAACAGTCTTTTTGTAGAATCTGCAAAGGGATATTTGTGAGGTCTTTGAGGCCTATGTTGAAAAAGGAAATATCTTCACAGAAAAACCATAAAT . PASS SVTYPE=BND;MATEID=r_76_0;SVINSLEN=143;SVINSSEQ=TCATCACAAAGAGGTGAGTGTTCAATAATTCTTTTTATTGAGCGGTTTGGAAACAGTCTTTTTGTAGAATCTGCAAAGGGATATTTGTGAGGTCTTTGAGGCCTATGTTGAAAAAGGAAATATCTTCACAGAAAAACCATAAA TR:VR 31:6 29:0 chr17 21842528 d_698 C . PASS END=21842929;SVTYPE=DEL;SVLEN=-401;SVINSLEN=111;SVINSSEQ=GAACTTTTGCCGCCGTTTTTTCCCCTGCCGCCGCGGCTTTTTGCAGCTTTTTGTCCCCGCCACCATGGGTTTTGCCGATGCGGCTTTTGACCCCCACCGCCAGGGCTTTTG TR:VR 29:10 8:0 chr20 28815920 d_980 T . Too_low_VAF END=28816030;SVTYPE=INS;SVINSLEN=281;SVINSSEQ=AGGACTCAAAGCACTCCAAATGTCCACTTGAAGATTCCACAAAAAGAGTGTTTCCAAAATACTGAATCAAATGAGACGTTCAACTCTGTGAGATGAACGCACACATCATAAAGAAGTTTCTCAGAATTCTTCTGTCTAGTTTTTATGTGAAGATACTTCCTTTTCTTCCATAGGAATCAAAGGGCTTCAAATGTCCCTTTGCAAATACTACAAATAGAGAGTTTCAAAACTGTGCAATCAACAGAAAGGTTTAATTCTGTAAGACTAATGTACACATCATG TR:VR 153:4 53:1 chr3 116048282 r_200_0 G [chr3:145972176[A . PASS SVTYPE=BND;MATEID=r_200_1 TR:VR 132:29 14:0 chr3 145972176 r_200_1 A [chr3:116048282[A . PASS SVTYPE=BND;MATEID=r_200_0 TR:VR 132:29 14:0 chr7 127562938 r_271 C . PASS END=127565038;SVTYPE=DUP;SVLEN=2100;SVINSLEN=25;SVINSSEQ=TATTTAGTGCCTTGTGTCACACATA TR:VR 31:5 7:0 chr12 31119954 i_228 G . PASS END=31119954;SVTYPE=INS;SVINSLEN=2117;SVINSSEQ=AGGGTAACCCCCCGCCAGGCAGGGACTGACAGCCAGCCCCTCTTCACCTCTGGCTCTTGGAGCCCCCATCGCAGAGTGGGGAGGCACCACATGCGAGGCGGGGACTGCGGGCCAACCCCACTTCCCCCTGGCTCTTGGGACCACCATCGCAGTGGGGGGGAGGTACACCCACGAGGCGGGGACGGAGAGTCAGCCCCTCTTCCCCCACTGGCTCTTGGGACCCCCATCGCGAAAGGGGGAGAGGCACCCTCCGCTGGGACCCCATACCGCGGGGACGGGGAGAGACAGCCCCTCTCCCCCCACCGGCTCTTCGGACCCCCATCGCAGTGGGGGGAGGCACCCCATGCGAGGCGGGGTCTGACAGCCAACCCCTCTTCCCCCTCTGGCTCTTACGACCCCCATCGCAAGGGGGAGGCACCCCCCGCGAGGCGGGGACTGAGGGCTCCAGCCCCCTCTTCCCCGCTGGCTTAGGACCCCCATCGCGGATCCTAAGATCCTTAGGACCCACCTGGAGGACTGTGGGTATTAGGTGCCCAAGAAGAAAGCTCAGATCTGCCGACGTTACTTAGATTTACTATCCGACAGGGGTCGAACACAGCTCGGGATCAGAAAGAAAGCAGGTCATTTGCAATCTACCGGAGCCAGGCCCTCTTCCCCCACTAGCTCTTAGGTCACCCATGGCCGGGGGAAGCACCCCCCACGAGGCGGGGACTGAGAGCCAGCGCCTCTCCCCCCAGGCTGTTAGGACCCCCATCGCAGGAGGGGGAGACACACCCCAGGAGGCCGGGACTGACAGCCAGCCCCTCTCCCCCCGCTGGCTATTAAGACACCCATCGCAGGGGGTGAGGCAACCCCTATGAGGCGGGGACTGAGAAGCAGCCCCTCTTTCAACCTTGCTCTTGGGACCCCCATCGCAGGGGGGAGGCATCCCCCACGAGGCGGGGACTGAGAGCCAGCCCCTCTTCCCCCCCATGGCTATTAGGACCCCGAATGCAGGCGCGTGGCACTCCCCGCGAGGCGGGGACTGAGAGCCAGCACCACTTCCCCCCCTGTGTCTTAGAACTGCCATCGCAGCGGGGAGAGCACTCCTCACGAGGCGGGGACTGAGAGCCAACCCCTCCCACCCCCAGCTCTTAGGACCCCCATCGCAGTGGGGGGAAGCACCACCGAGAGACGGGGACTAGAGGCCAGCCCCTCTTCTCCGCGCTGTCCCTTGGGACCCCGATCACCAAGGTGGGGAAAGGCACCCCCGAGAGGCGGGGATCGAGAGCCTGCCCTTATTCCCCCCCTTGGCTCTTTCGGAGACCCCATCGCAGGGGGAGGCACCCGCGCGGTTGGAGACTGAGAGCCAGCCCCTCACTTCCCCACTGGCAACCTTAGGACACCCATCGCAGGGGTGGGAGGCACTTCCATCGAGGCGGGGACTGAGAGGCCAGCCCCCTCCTCCCTCTGGCTCTTAGGATCCCCATCGCAAGGGGAGGAAGACACCGACCGCATAGTCGGGGACTGAGAAGCCAGCCCCTCTTCCCCCCAGGCTCTTCCGACCCCCCATCGCAGGGGGGGAGGCACCCCCTGCGAGGGCGGGGACTGAGAGCCAGCCCCTCTTCCCCCCAGGCTCTTGGGACCCCCATCGCAATTGGGGGAGAGGCATTCTCCGCGAGGCGCGGACTGAGAGCCAGCCCCTCTTCCCCCCGCCTGGCTCTAGGAACCCCCATCGCAGGGGGTGGAGGCACCCACGCGATTTCGGGGGACAGAGCCAGCCCCTCTCCCCCCACCGGCTCTTCGGACCCCCATCGCAGGGGGGAGGCACCCATCGCGAGGCGGGAACTGAGGAGCCGGCCCCTCTACCTTTACGTGGCTCTTAGGAGCCCCATCGCGGGGTTAGGCCACCCAGCGAGGCGAGGATTGAGAGCCAGCCCCTCTTCTCCCCCTTGGCTCTTAGGAGCCCCATCGCCCAGGTGGGGGAGGCACCCCCCGCGGGGGCGGGGACTGAGAGCCAGCCTCTCTTCCTCCCGTGGCTCTTGGGACCCCCATCGCAGTCGCTTCGCACCCCACGCGGGGGCGGAGGTACTGAGAGCCAGCTCCTCTTACCCCCGTGTCTTAGGACTGCCATCGCA TR:VR 37:3 6:0 chr14_GL000225v1_random 121131 d_564 C . Too_low_VAF END=121237;SVTYPE=DEL;SVLEN=-106;SVINSLEN=40;SVINSSEQ=ACCCAGTGATGGGACTTTTGTGGTAGGCTAATGCTCTCAT TR:VR 689:4 366:1 chr3 116050658 r_201_0 C [chr3:122544324[G . PASS SVTYPE=BND;MATEID=r_201_1 TR:VR 27:5 14:0 chr3 122544324 r_201_1 G [chr3:116050658[G . PASS SVTYPE=BND;MATEID=r_201_0 TR:VR 27:5 14:0 chr6 38795580 i_1134 A . PASS END=38795581;SVTYPE=INS;SVINSLEN=132;SVINSSEQ=AAAAAAAAAAAAAAAAAAGAGTGTAAGTCAAGATGCAGGAGGGCGTGAACCCAGGAGGCGGAGCTTGCAGTGAGCTGAGATCTCACCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTGTGTCTCAAAAA TR:VR 28:5 7:0 chr17_GL000205v2_random 22661 d_727 T . Too_small_size END=22617;SVTYPE=INS;SVINSLEN=4;SVINSSEQ=AGCA TR:VR 33:5 14:0 chr22 20163473 i_843 C . Too_low_VAF END=20163473;SVTYPE=INS;SVINSLEN=254;SVINSSEQ=CACCATCACCACCACCATCACCATAACCACCACCACCACCATCACCACCACCATCACTTTCTATCCACCCACTGCCCACCTTTCTTTCTCCCATTTCTTTCAGCCATCGGTAGTTGCCCTTCTGTTAAACACCATCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCATCACCACACACTACCACCATCACTACCACCACCATCACCATCACCACCACCACCATCACCACCAACACCATC TR:VR 94:4 30:0 chr3 116064309 r_202_0 T T]chr3:122025523] . PASS SVTYPE=BND;MATEID=r_202_1 TR:VR 47:12 9:0 chr3 122025523 r_202_1 C C]chr3:116064309] . PASS SVTYPE=BND;MATEID=r_202_0 TR:VR 47:12 9:0 chr4 189232836 i_994 G . Too_small_size END=189232836;SVTYPE=INS;SVINSLEN=34;SVINSSEQ=CAGCAGCGCCTGCGGCGGCGTTTGCGTAGCTTGC TR:VR 60:6 27:0