##fileformat=VCFv4.3
##fileDate=20230117
##source=nanomonsv-0.5.0
##reference=/projects/jfan_prj/jfan_prj/Nanopore_Testing/2021_nanopore_sv_testing/scratch/depth_testing/POG/COLO829/hg38_no_alt.fa
##contig=<ID=chr1,length=248956422>
##contig=<ID=chr2,length=242193529>
##contig=<ID=chr3,length=198295559>
##contig=<ID=chr4,length=190214555>
##contig=<ID=chr5,length=181538259>
##contig=<ID=chr6,length=170805979>
##contig=<ID=chr7,length=159345973>
##contig=<ID=chr8,length=145138636>
##contig=<ID=chr9,length=138394717>
##contig=<ID=chr10,length=133797422>
##contig=<ID=chr11,length=135086622>
##contig=<ID=chr12,length=133275309>
##contig=<ID=chr13,length=114364328>
##contig=<ID=chr14,length=107043718>
##contig=<ID=chr15,length=101991189>
##contig=<ID=chr16,length=90338345>
##contig=<ID=chr17,length=83257441>
##contig=<ID=chr18,length=80373285>
##contig=<ID=chr19,length=58617616>
##contig=<ID=chr20,length=64444167>
##contig=<ID=chr21,length=46709983>
##contig=<ID=chr22,length=50818468>
##contig=<ID=chrX,length=156040895>
##contig=<ID=chrY,length=57227415>
##contig=<ID=chrM,length=16569>
##contig=<ID=chr1_KI270706v1_random,length=175055>
##contig=<ID=chr1_KI270707v1_random,length=32032>
##contig=<ID=chr1_KI270708v1_random,length=127682>
##contig=<ID=chr1_KI270709v1_random,length=66860>
##contig=<ID=chr1_KI270710v1_random,length=40176>
##contig=<ID=chr1_KI270711v1_random,length=42210>
##contig=<ID=chr1_KI270712v1_random,length=176043>
##contig=<ID=chr1_KI270713v1_random,length=40745>
##contig=<ID=chr1_KI270714v1_random,length=41717>
##contig=<ID=chr2_KI270715v1_random,length=161471>
##contig=<ID=chr2_KI270716v1_random,length=153799>
##contig=<ID=chr3_GL000221v1_random,length=155397>
##contig=<ID=chr4_GL000008v2_random,length=209709>
##contig=<ID=chr5_GL000208v1_random,length=92689>
##contig=<ID=chr9_KI270717v1_random,length=40062>
##contig=<ID=chr9_KI270718v1_random,length=38054>
##contig=<ID=chr9_KI270719v1_random,length=176845>
##contig=<ID=chr9_KI270720v1_random,length=39050>
##contig=<ID=chr11_KI270721v1_random,length=100316>
##contig=<ID=chr14_GL000009v2_random,length=201709>
##contig=<ID=chr14_GL000225v1_random,length=211173>
##contig=<ID=chr14_KI270722v1_random,length=194050>
##contig=<ID=chr14_GL000194v1_random,length=191469>
##contig=<ID=chr14_KI270723v1_random,length=38115>
##contig=<ID=chr14_KI270724v1_random,length=39555>
##contig=<ID=chr14_KI270725v1_random,length=172810>
##contig=<ID=chr14_KI270726v1_random,length=43739>
##contig=<ID=chr15_KI270727v1_random,length=448248>
##contig=<ID=chr16_KI270728v1_random,length=1872759>
##contig=<ID=chr17_GL000205v2_random,length=185591>
##contig=<ID=chr17_KI270729v1_random,length=280839>
##contig=<ID=chr17_KI270730v1_random,length=112551>
##contig=<ID=chr22_KI270731v1_random,length=150754>
##contig=<ID=chr22_KI270732v1_random,length=41543>
##contig=<ID=chr22_KI270733v1_random,length=179772>
##contig=<ID=chr22_KI270734v1_random,length=165050>
##contig=<ID=chr22_KI270735v1_random,length=42811>
##contig=<ID=chr22_KI270736v1_random,length=181920>
##contig=<ID=chr22_KI270737v1_random,length=103838>
##contig=<ID=chr22_KI270738v1_random,length=99375>
##contig=<ID=chr22_KI270739v1_random,length=73985>
##contig=<ID=chrY_KI270740v1_random,length=37240>
##contig=<ID=chrUn_KI270302v1,length=2274>
##contig=<ID=chrUn_KI270304v1,length=2165>
##contig=<ID=chrUn_KI270303v1,length=1942>
##contig=<ID=chrUn_KI270305v1,length=1472>
##contig=<ID=chrUn_KI270322v1,length=21476>
##contig=<ID=chrUn_KI270320v1,length=4416>
##contig=<ID=chrUn_KI270310v1,length=1201>
##contig=<ID=chrUn_KI270316v1,length=1444>
##contig=<ID=chrUn_KI270315v1,length=2276>
##contig=<ID=chrUn_KI270312v1,length=998>
##contig=<ID=chrUn_KI270311v1,length=12399>
##contig=<ID=chrUn_KI270317v1,length=37690>
##contig=<ID=chrUn_KI270412v1,length=1179>
##contig=<ID=chrUn_KI270411v1,length=2646>
##contig=<ID=chrUn_KI270414v1,length=2489>
##contig=<ID=chrUn_KI270419v1,length=1029>
##contig=<ID=chrUn_KI270418v1,length=2145>
##contig=<ID=chrUn_KI270420v1,length=2321>
##contig=<ID=chrUn_KI270424v1,length=2140>
##contig=<ID=chrUn_KI270417v1,length=2043>
##contig=<ID=chrUn_KI270422v1,length=1445>
##contig=<ID=chrUn_KI270423v1,length=981>
##contig=<ID=chrUn_KI270425v1,length=1884>
##contig=<ID=chrUn_KI270429v1,length=1361>
##contig=<ID=chrUn_KI270442v1,length=392061>
##contig=<ID=chrUn_KI270466v1,length=1233>
##contig=<ID=chrUn_KI270465v1,length=1774>
##contig=<ID=chrUn_KI270467v1,length=3920>
##contig=<ID=chrUn_KI270435v1,length=92983>
##contig=<ID=chrUn_KI270438v1,length=112505>
##contig=<ID=chrUn_KI270468v1,length=4055>
##contig=<ID=chrUn_KI270510v1,length=2415>
##contig=<ID=chrUn_KI270509v1,length=2318>
##contig=<ID=chrUn_KI270518v1,length=2186>
##contig=<ID=chrUn_KI270508v1,length=1951>
##contig=<ID=chrUn_KI270516v1,length=1300>
##contig=<ID=chrUn_KI270512v1,length=22689>
##contig=<ID=chrUn_KI270519v1,length=138126>
##contig=<ID=chrUn_KI270522v1,length=5674>
##contig=<ID=chrUn_KI270511v1,length=8127>
##contig=<ID=chrUn_KI270515v1,length=6361>
##contig=<ID=chrUn_KI270507v1,length=5353>
##contig=<ID=chrUn_KI270517v1,length=3253>
##contig=<ID=chrUn_KI270529v1,length=1899>
##contig=<ID=chrUn_KI270528v1,length=2983>
##contig=<ID=chrUn_KI270530v1,length=2168>
##contig=<ID=chrUn_KI270539v1,length=993>
##contig=<ID=chrUn_KI270538v1,length=91309>
##contig=<ID=chrUn_KI270544v1,length=1202>
##contig=<ID=chrUn_KI270548v1,length=1599>
##contig=<ID=chrUn_KI270583v1,length=1400>
##contig=<ID=chrUn_KI270587v1,length=2969>
##contig=<ID=chrUn_KI270580v1,length=1553>
##contig=<ID=chrUn_KI270581v1,length=7046>
##contig=<ID=chrUn_KI270579v1,length=31033>
##contig=<ID=chrUn_KI270589v1,length=44474>
##contig=<ID=chrUn_KI270590v1,length=4685>
##contig=<ID=chrUn_KI270584v1,length=4513>
##contig=<ID=chrUn_KI270582v1,length=6504>
##contig=<ID=chrUn_KI270588v1,length=6158>
##contig=<ID=chrUn_KI270593v1,length=3041>
##contig=<ID=chrUn_KI270591v1,length=5796>
##contig=<ID=chrUn_KI270330v1,length=1652>
##contig=<ID=chrUn_KI270329v1,length=1040>
##contig=<ID=chrUn_KI270334v1,length=1368>
##contig=<ID=chrUn_KI270333v1,length=2699>
##contig=<ID=chrUn_KI270335v1,length=1048>
##contig=<ID=chrUn_KI270338v1,length=1428>
##contig=<ID=chrUn_KI270340v1,length=1428>
##contig=<ID=chrUn_KI270336v1,length=1026>
##contig=<ID=chrUn_KI270337v1,length=1121>
##contig=<ID=chrUn_KI270363v1,length=1803>
##contig=<ID=chrUn_KI270364v1,length=2855>
##contig=<ID=chrUn_KI270362v1,length=3530>
##contig=<ID=chrUn_KI270366v1,length=8320>
##contig=<ID=chrUn_KI270378v1,length=1048>
##contig=<ID=chrUn_KI270379v1,length=1045>
##contig=<ID=chrUn_KI270389v1,length=1298>
##contig=<ID=chrUn_KI270390v1,length=2387>
##contig=<ID=chrUn_KI270387v1,length=1537>
##contig=<ID=chrUn_KI270395v1,length=1143>
##contig=<ID=chrUn_KI270396v1,length=1880>
##contig=<ID=chrUn_KI270388v1,length=1216>
##contig=<ID=chrUn_KI270394v1,length=970>
##contig=<ID=chrUn_KI270386v1,length=1788>
##contig=<ID=chrUn_KI270391v1,length=1484>
##contig=<ID=chrUn_KI270383v1,length=1750>
##contig=<ID=chrUn_KI270393v1,length=1308>
##contig=<ID=chrUn_KI270384v1,length=1658>
##contig=<ID=chrUn_KI270392v1,length=971>
##contig=<ID=chrUn_KI270381v1,length=1930>
##contig=<ID=chrUn_KI270385v1,length=990>
##contig=<ID=chrUn_KI270382v1,length=4215>
##contig=<ID=chrUn_KI270376v1,length=1136>
##contig=<ID=chrUn_KI270374v1,length=2656>
##contig=<ID=chrUn_KI270372v1,length=1650>
##contig=<ID=chrUn_KI270373v1,length=1451>
##contig=<ID=chrUn_KI270375v1,length=2378>
##contig=<ID=chrUn_KI270371v1,length=2805>
##contig=<ID=chrUn_KI270448v1,length=7992>
##contig=<ID=chrUn_KI270521v1,length=7642>
##contig=<ID=chrUn_GL000195v1,length=182896>
##contig=<ID=chrUn_GL000219v1,length=179198>
##contig=<ID=chrUn_GL000220v1,length=161802>
##contig=<ID=chrUn_GL000224v1,length=179693>
##contig=<ID=chrUn_KI270741v1,length=157432>
##contig=<ID=chrUn_GL000226v1,length=15008>
##contig=<ID=chrUn_GL000213v1,length=164239>
##contig=<ID=chrUn_KI270743v1,length=210658>
##contig=<ID=chrUn_KI270744v1,length=168472>
##contig=<ID=chrUn_KI270745v1,length=41891>
##contig=<ID=chrUn_KI270746v1,length=66486>
##contig=<ID=chrUn_KI270747v1,length=198735>
##contig=<ID=chrUn_KI270748v1,length=93321>
##contig=<ID=chrUn_KI270749v1,length=158759>
##contig=<ID=chrUn_KI270750v1,length=148850>
##contig=<ID=chrUn_KI270751v1,length=150742>
##contig=<ID=chrUn_KI270752v1,length=27745>
##contig=<ID=chrUn_KI270753v1,length=62944>
##contig=<ID=chrUn_KI270754v1,length=40191>
##contig=<ID=chrUn_KI270755v1,length=36723>
##contig=<ID=chrUn_KI270756v1,length=79590>
##contig=<ID=chrUn_KI270757v1,length=71251>
##contig=<ID=chrUn_GL000214v1,length=137718>
##contig=<ID=chrUn_KI270742v1,length=186739>
##contig=<ID=chrUn_GL000216v2,length=176608>
##contig=<ID=chrUn_GL000218v1,length=161147>
##contig=<ID=chrEBV,length=171823>
##FILTER=<ID=Duplicate_with_close_SV,Description="When multiple SVs that share breakpoints in close proximity are detected, all but one SVs are filtered.">
##FILTER=<ID=Duplicate_with_insertion,Description="Breakend SVs that are inferred to be the same as any of detected insertions">
##FILTER=<ID=Duplicate_with_close_insertion,Description="When multiple insertions in close proximity are detected, all but one insertions are filtered.">
##FILTER=<ID=SV_with_decoy,Description="SVs involving decoy contigs">
##FILTER=<ID=Too_small_size,Description="Insertions whose size is below the threshould (currently 100bp)">
##FILTER=<ID=Too_low_VAF,Description="SVs whose variant allele frequencies are inferred to be low">
##INFO=<ID=SVTYPE,Number=1,Type=String,Description="Type of structural variant">
##INFO=<ID=SVLEN,Number=1,Type=Integer,Description="Difference in length between REF and ALT alleles">
##INFO=<ID=END,Number=1,Type=Integer,Description="End position of the variant described in this record">
##INFO=<ID=MATEID,Number=1,Type=String,Description="ID of mate breakend">
##INFO=<ID=SVINSLEN,Number=1,Type=Integer,Description="Length of insertion">
##INFO=<ID=SVINSSEQ,Number=1,Type=String,Description="Sequence of insertion">
##ALT=<ID=DEL,Description="Deletion">
##ALT=<ID=INS,Description="Insertion">
##ALT=<ID=DUP,Description="Duplication">
##FORMAT=<ID=TR,Number=1,Type=Integer,Description="The number of reads around the breakpoints">
##FORMAT=<ID=VR,Number=1,Type=Integer,Description="The number of variant supporting reads determined in the validation realignment step">
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	TUMOR	CONTROL
chr18	20918766	i_246	C	<INS>	.	PASS	END=20918766;SVTYPE=INS;SVINSLEN=263;SVINSSEQ=AATTGAAGTCCCAGTGTTGAACATTCCCATTCATAGAGCAGGTTTGAAACACTCTTTTTGTACTATCTGGAAGTGGACATTTGGAGCGCTTTCAGGTCTACGGTGAAAAAGGAGATATCTTCCAATAAAAACTAGATAGAAGCAATGTCAGAACTTTTTCATGATGTATCTACTCAGCAAACAGAGTTGAACCTTTCTTTTGAGAGAGCAGTTTTGAAACACTCTTTTTGTGGAATATGCAAGTGGGTATTAGGCCAGCTTGC	TR:VR	39:3	27:0
chr3	115785363	r_82	C	<DEL>	.	PASS	END=116244879;SVTYPE=DEL;SVLEN=-459516	TR:VR	38:7	46:0
chr4	167348433	i_486	A	<INS>	.	PASS	END=167348433;SVTYPE=INS;SVINSLEN=145;SVINSSEQ=GTTTTCAACTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTG	TR:VR	27:11	30:0
chr9	5844449	d_738	A	<DEL>	.	PASS	END=5844538;SVTYPE=DEL;SVLEN=-89	TR:VR	32:5	21:0
chr1	2667682	d_0	A	<DEL>	.	Too_low_VAF	END=2667854;SVTYPE=DEL;SVLEN=-172;SVINSLEN=93;SVINSSEQ=AGAGCACCCCACATCACCGGGTGAGCATCTGACAGCCTGGAACAGCAACCATACCCTCAGGGTAAGCATCTGACAGACTGGAACAGCACCCAC	TR:VR	166:3	116:1
chr12	20216162	d_99	G	<DEL>	.	PASS	END=20217641;SVTYPE=DEL;SVLEN=-1479	TR:VR	24:4	39:0
chr18	20928812	r_40_0	C	C]chr18:24277664]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_40_1	TR:VR	76:3	57:0
chr18	24277664	r_40_1	T	T]chr18:20928812]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_40_0	TR:VR	76:3	57:0
chr1	27877621	d_3	C	<DEL>	.	PASS	END=27877886;SVTYPE=DEL;SVLEN=-265	TR:VR	23:3	23:0
chr12	24327200	i_85	T	<INS>	.	PASS	END=24327200;SVTYPE=INS;SVINSLEN=115;SVINSSEQ=GCAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACAGAACATTTTCAAGTATATTTACTCTTTATTGCATTCCTTCATTTGCATTAAACAG	TR:VR	25:11	28:0
chr3	117581951	d_587	A	<DEL>	.	PASS	END=117582513;SVTYPE=DEL;SVLEN=-562	TR:VR	31:11	31:0
chr5	147837713	i_510	C	<INS>	.	PASS	END=147837713;SVTYPE=INS;SVINSLEN=246;SVINSSEQ=TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	TR:VR	20:4	27:0
chr15	62331579	i_159	T	<INS>	.	PASS	END=62331580;SVTYPE=INS;SVINSLEN=162;SVINSSEQ=GAGACACAGTTTCACTCTTGTCACCCAGGCTGGAGTGCAGTAGCATAATCTTGGCTGACTGCAACCTCCACCTCCTGGATTCAAGTGATTCTTCTGTTTCAGCCTCCCTAGTAGCTGGGATTACAGGCGCGCACCACCATGCCCAGCAAATTTTTTTTTCTT	TR:VR	23:3	29:0
chr18	21961977	r_41_0	C	C]chr18:22253835]	.	PASS	SVTYPE=BND;MATEID=r_41_1	TR:VR	44:6	49:0
chr18	22253835	r_41_1	C	C]chr18:21961977]	.	PASS	SVTYPE=BND;MATEID=r_41_0	TR:VR	44:6	49:0
chr8	102699553	d_731	T	<DEL>	.	PASS	END=102699700;SVTYPE=DEL;SVLEN=-147	TR:VR	27:11	38:0
chr18	21964425	r_42	G	<DUP>	.	PASS	END=23324256;SVTYPE=DUP;SVLEN=1359831	TR:VR	50:10	49:0
chr2	135963689	d_459	T	<DEL>	.	PASS	END=135963771;SVTYPE=DEL;SVLEN=-82	TR:VR	27:5	31:0
chr4	186195430	r_86_0	T	T]chr4:186724857]	.	PASS	SVTYPE=BND;MATEID=r_86_1	TR:VR	34:6	49:0
chr4	186724857	r_86_1	C	C]chr4:186195430]	.	PASS	SVTYPE=BND;MATEID=r_86_0	TR:VR	34:6	49:0
chr18	21993592	r_43_0	T	T]chr18:30031305]	.	PASS	SVTYPE=BND;MATEID=r_43_1	TR:VR	40:13	46:0
chr18	30031305	r_43_1	C	C]chr18:21993592]	.	PASS	SVTYPE=BND;MATEID=r_43_0	TR:VR	40:13	46:0
chr3	134131966	i_441	A	<INS>	.	PASS	END=134131985;SVTYPE=INS;SVINSLEN=829;SVINSSEQ=GGTTGGTCTGTCTTTCCCAGCCCACTTGCTACTTCCCCAAACAGGAGCCATTCATTGGTTACGGCAGCACTTTTATTTTTCCTTACACAATGACGTGTTGCTGGGGCCTAATGTTCTCACATAACAGTAGAAAACCAAAATTTGTTGTCATCTCTTCAAAGAATCGAGAATTGCGTACAAAAAAAACCTTACATAAATTAAGAATGAATACATTTTCCCCCTCCCCTCTCCCCCTCCCCCTCCCCTCCCCCCTCCCCCTCCCCTCTCCCCCTCCCCCTCTCCCCTCCCCCTCCCCTCTCCCCTCTCCCCCCTCCCCTCTCCCCCCCCCCTCCCCTCTCCCCTCCCCTCTCCCCTCCCTTCTCCCCTCCCCCTCCCCTCCCCCTCCCCCCGATTCTGTAATGAAAAGTAGTGGTTTCAATTTCTCAAAAAAGTTTGATTCAAGGGGACATGTGAATAGGGATGAAGACAAAGAAAATTAAAATGCAGGATGGTTCTAAGTGATAAAGAACCTTTTAAAAAAAAAAACTGTCATAATTAGATGGAAAATTTCCACACCATCATTTGCATTGAGAGATTTCCCTTAATTTCCTACTGCCATGACAGTAATGAAAGAAAAAGAATGCAGCACCTCATCCCTCCCAGAAAGCCATGGCTCTGGACTCCACCCACTGAAAACAGGGCTTTTGTGGGAATACAATGGGACAAGAAGAAAAACATGCTGAACCTGATCTCCATGGGACCTGATGTGGAGTCACGTTCATTCACATCACTGGCTTGCAGCCTCTCCACTCACAAGTTATTGATAATCGAAAAAATAAAACACCATGCG	TR:VR	27:8	24:0
chr4	186696946	r_87	C	<DUP>	.	PASS	END=187454938;SVTYPE=DUP;SVLEN=757992	TR:VR	35:5	45:0
chr18	22127979	r_44_0	C	[chr18:22384038[T	.	PASS	SVTYPE=BND;MATEID=r_44_1	TR:VR	45:11	48:0
chr18	22384038	r_44_1	T	[chr18:22127979[T	.	PASS	SVTYPE=BND;MATEID=r_44_0	TR:VR	45:11	48:0
chr4	187277466	r_88_0	G	[chr4:187398707[A	.	PASS	SVTYPE=BND;MATEID=r_88_1	TR:VR	35:5	43:0
chr4	187398707	r_88_1	A	[chr4:187277466[A	.	PASS	SVTYPE=BND;MATEID=r_88_0	TR:VR	35:5	43:0
chr15	94743504	i_160	T	<INS>	.	PASS	END=94743504;SVTYPE=INS;SVINSLEN=1765;SVINSSEQ=TATATTTTTAATAGATGTTTAAAAAGAAAATTAAAATTATTCTTCACAGTCACCATTTTTGAAAACACAAAAGTAGCAAAAAGAGATACCAGCTCATGCAAACTAAATAAAACAAAAGTGTTCCTGTTTCTCCACGTGTGTCCATCTTTATATACTCAGTGTCAAATATACTGGCAGGCAGACAGCAGATGTTACATATGTACTGGCCAAATGAATGAATAATAAATCACTATGAAGTGAATGGCTTGTGACAGCCCAGCCACTAGGCAAGCCTGGAGGATAACCATCTATGAGGGACCTCAGAGAAAGAACTGCTGAAAGAAGCCCATGGGCCTCCTTGACTTCTAAGATACATTTAGACATAATACTATTTAAGAGAGCAAGTAAGAGCAAATTTTCTCCCATAGTTCTGATTATCATTATAGTTTAAGCGTTAGACCTTGTTCAAACAAGCTTGGAAAACAAGCTGTCTTGTCTGTTAAGGGGAAGTAAGTGATATAAAAATGTAAAGGTTAAGATTTCTGATAAGTTAAAGCTTGGTAAAATATTTCCACGTATGTAAATGATTATGCCAATTTAATTTGTTTCCAAAATTGGAATATCCTTTAGAATAGAAATAAAATATTTAATCTGAATGGTAATACACTGATCTCCTTTTGTCATGAACTACCGAGTCCTTTCTACAGTTTTGGCCATACACATGAAAATTAAATTACAGTATTTTAAAATAGTATTTGTATATTCCATTTGGGATCCTAACTTACCTAAGCAGCTCGAATACATTTTAAATTAAAATCAAGTTTGGATTTTTTTTTCCCAGAGAGGTGACTTATTGCAAATAAGTAGCTCCCTCTATTTCATATTTGTCCGTTTTTATTCTAAATATTTTAATACTATAACTTAAATATTCTATTGGTTTTATTTTTCTTAATATGATAATATTTTTATAAAGTATTTAAAGTAAACAAAATGTATTATAGTTATTGTTAGATAAAGGTGATAGACTTAAATAAACTAAGGCATGAGCCATATCTGGGGTTCATGGATATTGAAATAATTTATTCTTTTAAAGCACATTATTGAGATGTTACACACATTTGGAAACACAAAGGGTAATAACTTTAGTTGCTATCGATAATAAAAATTAGATAACCTGAGGAATCTTTAGAAGAGCATAGCAATGTAAAAAAAAAAAAAAGAGGCTAAAATAACACACATACGTTTTAACAGTGTTTGTCTTTTGCTGGTGGGACTATGAATGATTTTTCTCCCCACTGTCTACATTTTTACAATTAACATTATTTTAACAAGAAATAAAAATGGCGTGTTACTTTCTTTTAAAAAAATTGTTAAATGTTAAAGTAAAATAATGGCACTACACTATTTCAAAAGCAAAATATTAATTTCATGTTGAGCATAAAATTCTTATTAAGGCTGAGTCTCTTTGTGTCATACTAATAAAAATTCTCCAATTATATATCTTAAGGGTACCTGGGCAGAGCAACCCTCAACATCACTAGAATGAATCCCTTCTTGGAACTAAATTCTCCAAATCAGGGAAGTCACTTTCTTAAGCAATAAAATATTTGGAAAAAAATTAAACTTATTTATAAAGTCTGTTTTTCTACTAAGTCATTTAGCTCCTTTATTGCTTTCTTTATGTGGCTATTTTTCAACATTCTCTTAATGATTCAGAGATATTCTTGTGATTGTTAAAGACTTCACAATTAAATACGCGGCACCTGTTAGGATGTAGCGGGCACTA	TR:VR	26:13	19:0
chr18	22375475	r_45_0	A	A]chr18:30645341]	.	PASS	SVTYPE=BND;MATEID=r_45_1	TR:VR	43:6	54:0
chr18	30645341	r_45_1	C	C]chr18:22375475]	.	PASS	SVTYPE=BND;MATEID=r_45_0	TR:VR	43:6	54:0
chr2	155260960	r_65	A	<DUP>	.	PASS	END=155324104;SVTYPE=DUP;SVLEN=63144	TR:VR	55:5	55:0
chr4	187377731	r_89	A	<DEL>	.	PASS	END=187623211;SVTYPE=DEL;SVLEN=-245480	TR:VR	38:3	37:0
chr18	22395901	r_46_0	A	A]chr18:30976778]	.	PASS	SVTYPE=BND;MATEID=r_46_1	TR:VR	34:9	51:0
chr18	30976778	r_46_1	T	T]chr18:22395901]	.	PASS	SVTYPE=BND;MATEID=r_46_0	TR:VR	34:9	51:0
chr14	25210551	r_24_0	T	TCACCCACTCCCGATAGAGCAGTTTTCATACACTGATTTTGTAGAATCTGCTTGTGGATATTTGGAGCTCTTTGAGGAATTCGTTGTAAACGGGATATCCTCACATACAAACTAGACAGAAGCATTCTCGGAAACAGCTCTGTGA]chrUn_KI270538v1:63213]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_24_1;SVINSLEN=144;SVINSSEQ=CACCCACTCCCGATAGAGCAGTTTTCATACACTGATTTTGTAGAATCTGCTTGTGGATATTTGGAGCTCTTTGAGGAATTCGTTGTAAACGGGATATCCTCACATACAAACTAGACAGAAGCATTCTCGGAAACAGCTCTGTGA	TR:VR	78:3	52:1
chrUn_KI270538v1	63213	r_24_1	A	ATCACAGAGCTGTTTCCGAGAATGCTTCTGTCTAGTTTGTATGTGAGGATATCCCGTTTACAACGAATTCCTCAAAGAGCTCCAAATATCCACAAGCAGATTCTACAAAATCAGTGTATGAAAACTGCTCTATCGGGAGTGGGTG]chr14:25210551]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_24_0;SVINSLEN=144;SVINSSEQ=TCACAGAGCTGTTTCCGAGAATGCTTCTGTCTAGTTTGTATGTGAGGATATCCCGTTTACAACGAATTCCTCAAAGAGCTCCAAATATCCACAAGCAGATTCTACAAAATCAGTGTATGAAAACTGCTCTATCGGGAGTGGGTG	TR:VR	78:3	52:1
chr18	23321404	r_47	T	<DUP>	.	PASS	END=75302599;SVTYPE=DUP;SVLEN=51981195	TR:VR	34:11	47:0
chrX	7880666	r_130	G	<DUP>	.	PASS	END=7911345;SVTYPE=DUP;SVLEN=30679	TR:VR	56:6	30:0
chr18	23664994	r_48_0	T	T]chr18:30375316]	.	PASS	SVTYPE=BND;MATEID=r_48_1	TR:VR	46:13	41:0
chr18	30375316	r_48_1	G	G]chr18:23664994]	.	PASS	SVTYPE=BND;MATEID=r_48_0	TR:VR	46:13	41:0
chr5	164857808	r_96	A	<DEL>	.	PASS	END=165612075;SVTYPE=DEL;SVLEN=-754267	TR:VR	36:4	45:0
chr18	30032827	r_49	C	<DUP>	.	PASS	END=30800609;SVTYPE=DUP;SVLEN=767782	TR:VR	42:11	44:0
chr2	171122965	d_460	G	<DEL>	.	PASS	END=171123058;SVTYPE=DEL;SVLEN=-93	TR:VR	28:7	30:0
chr5	166610525	r_97_0	T	[chr8:137750067[T	.	PASS	SVTYPE=BND;MATEID=r_97_1	TR:VR	66:8	58:0
chr8	137750067	r_97_1	T	[chr5:166610525[T	.	PASS	SVTYPE=BND;MATEID=r_97_0	TR:VR	66:8	58:0
chr18	30194913	r_50	T	<DUP>	.	PASS	END=75019385;SVTYPE=DUP;SVLEN=44824472	TR:VR	44:8	54:0
chr2	180126822	r_66_0	C	C]chr2:180966141]	.	PASS	SVTYPE=BND;MATEID=r_66_1	TR:VR	48:4	44:0
chr2	180966141	r_66_1	T	T]chr2:180126822]	.	PASS	SVTYPE=BND;MATEID=r_66_0	TR:VR	48:4	44:0
chr3	184753207	i_443	T	<INS>	.	PASS	END=184753207;SVTYPE=INS;SVINSLEN=79;SVINSSEQ=GGTGGGAGAGAGGAGGAGGTGGTGGGAGAAGGAGGTGGTGGGAGAAGGAGGTGGGAGAAGAAGGTGGTGGGAGAAGGAG	TR:VR	31:4	10:0
chr5	166850253	r_98_0	G	G]chr8:137617178]	.	PASS	SVTYPE=BND;MATEID=r_98_1	TR:VR	45:3	46:0
chr8	137617178	r_98_1	G	G]chr5:166850253]	.	PASS	SVTYPE=BND;MATEID=r_98_0	TR:VR	45:3	46:0
chr8	1395661	d_723	T	<INS>	.	PASS	END=1395681;SVTYPE=INS;SVINSLEN=66;SVINSSEQ=TGAGTGCTTACTGAGCGCCACCTCCTCATCCTCCAGAGTCGTGTATTGAGTGCTTACTGAGCGCCA	TR:VR	9:3	17:0
chrX	9791951	i_697	G	<INS>	.	PASS	END=9791969;SVTYPE=INS;SVINSLEN=2681;SVINSSEQ=AACAGAATAGAACAGAACAGAATAGAATAGAATAGAATAGAATAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAACAGAATCAGAAACAGAACAGAACAGAATAGAATAGAACAGAACAGAACAGAACAGAATAGAACAGAATAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAATAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAATAGAAATCGAGAACAGAACAGAACAGAACAGAATAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAATAGAACAGAACAGAATAGAATAGAATAGAATAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAATAGAATAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAACAGAATAGAATAGAACAGAATAGAATAGAATAGAAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAACAGAATAGAATAGAAATAGAATAGAATAGAACAGAACAGAACAGAACAGAATAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAATAGAACAGAACAGAACAGAATAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAATAGAATCAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAATAGAACAGAACAGAATCAGAATAGAACAGAACAGAACAGAACAGAATAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAATAGAATAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAAAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAATAGAACAGAACAGAACAGAACAGAACAGAATAGAACAGAACAGAACAGAACAGAATAGAATAGAACAGAATAGAACAGAACAGAACAGAACAGAACAGAATAGAACAGAACAGAACAGAACAGAACAGAAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAATAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAATAGAATAGAATAGAATAGAATAGAATAGAACAGAATAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAACAGAATAGAACAGAACAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAACAGAACAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATA	TR:VR	19:4	9:0
chr11	113233012	d_91	G	<DEL>	.	PASS	END=113235173;SVTYPE=DEL;SVLEN=-2161	TR:VR	32:6	40:0
chr18	30661264	r_51	C	<DUP>	.	PASS	END=30881433;SVTYPE=DUP;SVLEN=220169	TR:VR	42:12	62:0
chr2	180126830	r_67_0	G	[chr2:180966141[T	.	PASS	SVTYPE=BND;MATEID=r_67_1	TR:VR	48:6	44:0
chr2	180966141	r_67_1	T	[chr2:180126830[T	.	PASS	SVTYPE=BND;MATEID=r_67_0	TR:VR	48:6	44:0
chr11	115420180	i_72	T	<INS>	.	PASS	END=115420180;SVTYPE=INS;SVINSLEN=293;SVINSSEQ=AAGAACCAATGACACGAACGTTGGGTGGGGAGGAGGAGGGAATGACTGCTGATGGGTATGGGGTGATGAGACTATTCTAAAATTAGATTGTGGTAATGGTTGCAAAACTCTGAATAAATCACCAAAAGACACTGAACTGGATTCTTTAAATGGGTAAGTTTTACGATATGTGAAATGTATTTCATTAGAGGTGTAGAAAAATGTCAGAAAGCTTAACTATTTCACATAAATAGAATCATTACAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	TR:VR	27:7	29:0
chr18	30805134	r_52_0	G	[chr18:30931055[A	.	PASS	SVTYPE=BND;MATEID=r_52_1	TR:VR	43:9	44:0
chr18	30931055	r_52_1	A	[chr18:30805134[A	.	PASS	SVTYPE=BND;MATEID=r_52_0	TR:VR	43:9	44:0
chr1	96060824	d_5	G	<DEL>	.	PASS	END=96062111;SVTYPE=DEL;SVLEN=-1287	TR:VR	25:3	29:0
chr17	31633211	r_37	C	<DEL>	.	PASS	END=31833223;SVTYPE=DEL;SVLEN=-200012	TR:VR	56:7	56:0
chr2	184326512	d_462	A	<DEL>	.	PASS	END=184327539;SVTYPE=DEL;SVLEN=-1027	TR:VR	23:5	19:0
chr1	96259772	i_11	T	<INS>	.	PASS	END=96259772;SVTYPE=INS;SVINSLEN=353;SVINSSEQ=GGCATGACCTAATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGATAAGGG	TR:VR	31:3	25:0
chr18	49579231	i_247	G	<INS>	.	PASS	END=49579231;SVTYPE=INS;SVINSLEN=473;SVINSSEQ=GAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGAG	TR:VR	20:4	30:0
chr10	100092102	r_9_0	G	[chrX:91080648[GT	.	PASS	SVTYPE=BND;MATEID=r_9_1;SVINSLEN=1;SVINSSEQ=G	TR:VR	47:6	45:1
chrX	91080648	r_9_1	T	[chr10:100092102[CT	.	PASS	SVTYPE=BND;MATEID=r_9_0;SVINSLEN=1;SVINSSEQ=C	TR:VR	47:6	45:1
chr15	94743876	i_170	G	<INS>	.	PASS	END=94744019;SVTYPE=INS;SVINSLEN=1395;SVINSSEQ=GCTTTTAATAAATGTGCTATGGTAAAAAAAAAAAAAAAAGAAAGAAAAAAGTTAATATTGCTTACAGCTATGTGTAATAATATTCAGTAATTTTCTCAACAACAAATATCTTCTACGGCCAGGAATAGCATAAGGCCATTAAGTTGCTGTGAGATAGGAGCAGAGTGCATCTGCAGGTGTCTGAAGGAGGAGAGCAGAATGAGAATGCACTCAGAGAGTTCACGCAGCCCCTCGTTCCCTCATTTTTAGGCCAGGAAGTGGCTCATCTGGCTTATGTTTTAAATATCATTATGATTGGTCTATGCCAAATAGATTTTTAGAGAAACAAGTGGTAGAAGTAAAATCAGGATAGAAATGACAGAGGCTTGGACTAGGGTAGCAGTGGTGGATATGATGAGAAGCAGTATAATACAATTTCTGTTTTGAAAATGTTAATACATAAAATCTTGTCAACTTTTTAAGGGGCTCAATATGGGAAAATGGGTTATAGATACGGGTAATGGCAAGAGCCACTGACAAGTTTACCAGTGACAAGATGTGCCAAAGGTTTAGGTATGGGCTGAGACACAGAAAGAAATAATAAAGGACACCTCCCAGGTTTTGGCCTGAGCAACTGCCTGAAGGTGATGCCACTTACTGAGGGGCCCAGTAAGAAAAGCAAACTTGGCTGGGGAAGAACTAGAAAGGAAATCGAGAGTTCAGACCTGACATGTTAAATGTGAGATGCAGCCATACAAGTGGACGTGATGACACCATTCTGTAGTTCAAGTGAATGTTCTGGCTAGAGATATCCATTTGGGAATTTTCACAGTAGATACAGAATTAAAACCTATGCAATTAGATATTATCAACCGGAGAGCAAGTAATGATAGAGAAAAACAAAGTATAAGGAAAACAGTAACTTGGGCAGTGCAATATTTAGATGTCATAAAGAGGAGGAAGATCCATCAACGCAGATAGAGAACACGCTAATGGGATAGAGGGAAAAAGTAACCCAATAGTACGTGGTGTCCTGGAAGCCAAATAAAGGAGGAAAAGCAGCTGGACTGTGTGATATGCTATTCAGAGACTGAGTAGGTCACCACTGCTTTGAGTTCCAGAATCTGAGTCTAGAGGGTCGCACATAAGACTTAATATTTAACGTATGTAATATTAGTTACATGTATTTTCCACCTCCTAAATTTCTCCCAAGCCCACCCTTCTTTCAGTTTTCCTACCTGTACAATAAATGGCCCTTATTAACCCATTCACTCATACTGAGTCCATTATAAAAACACAATAGTCCTTAACTCTGAAATATATTTCAAATCTACTCACTTCTCTCCGTCTCTACTGCCAACCTCCTTGTGCAAACCATGTTTGAGAATTTTTGTAACTCATTTTTTGAGAACTATT	TR:VR	24:10	19:0
chr2	19028195	r_59	A	<DEL>	.	PASS	END=19326967;SVTYPE=DEL;SVLEN=-298772	TR:VR	50:6	44:0
chr12	68417259	d_107	A	<DEL>	.	PASS	END=68417331;SVTYPE=DEL;SVLEN=-72;SVINSLEN=4;SVINSSEQ=AAGA	TR:VR	23:4	31:0
chr14	80420636	i_125	T	<INS>	.	PASS	END=80420636;SVTYPE=INS;SVINSLEN=978;SVINSSEQ=AAAAGTCCAGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCACAGAAATAACAGCAGTTTATTACTTACAGATGCCAGAGAGAAGAGGGCAGCATGCCTCCCAGGGCCAACAGGAAGTGGGGAGCCATCTAGGACATGCACAGTCAACTAGTGGGTGGGGAACAGGGCAAAGAGTACAAGTGACCTGTGGGCTGAGGCTTTTACTGGGGTCCAGGGCATTTTCCAAGCAGGTTTCCTCAGGGGAGTTGTAATTGGTGGGTTTAGAGCAAGTAGGCATAAATTTCATGGAGTCATGCTGTGTCTGAGAAGTCAGTATTAGGGTTCTCTAGGGGGACAGAACTAATAGGATAGATATATATATGAAGGGGAATTTAGTAGAATTGTCTCACATGATCACAAAGTGATGTCCCACTATTGGCCATCTGCAAGCTGCGGAGCAAAGGAAGCCAGTCCGGAGTCCCAAAACCTCAAAAATAGGAAAGCCAACAATGCAGCCTTCAGTCTGTGGCTGAAGGTACAAGAGCCCTAGCATATCACTGGTGTAAGTCCAAGAGTCCAAAAGCTGAAGAACTTGGAGTCTGATGTTCGAGGGCAGGAAGCATCCAGCACAAAGAAGAGAAAGATGAGGCCAGAAGACTCAGCAAGTCAAGTCCTTCCACGTTCTGCCTGCTTTATTCTAGCTGCCCTGGCAGCTGATTAGATGGTGCCCACCCAGATTGAGGGTGTGTCTGCCTCTCCCAGTCCACTGATTCAAATGTTAATCTCCTTTGGCAACACCCTCACAGACACACCTAGGAACAATACTTTGCATCCTTCAGTCTAATGAAGTTGACACTCAATATTACCCATCACAGAGAGGTGGTTACTGTGGCTTATTTCTGCTAGGACTGCAGAAATAAGCCACAGTAACCACCTCTCTGTGATAGGCAATATTTTAA	TR:VR	23:3	22:0
chr18	74745088	r_53_0	G	G[chr20:38133131[	.	PASS	SVTYPE=BND;MATEID=r_53_1	TR:VR	63:13	49:0
chr20	38133131	r_53_1	T	]chr18:74745088]T	.	PASS	SVTYPE=BND;MATEID=r_53_0	TR:VR	63:13	49:0
chr5	25778327	r_93	C	<DEL>	.	PASS	END=25880800;SVTYPE=DEL;SVLEN=-102473	TR:VR	29:5	48:0
chr14	81779850	i_126	T	<INS>	.	PASS	END=81779850;SVTYPE=INS;SVINSLEN=455;SVINSSEQ=TATACTGACTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAGATATTAAAGTCTTTATTTGCCCCCCCCATTTTTATTTTCAGTAATACAGGGTAAAATGAGTAGGATTACTTGATCTGGCCATCTATGGCCATTTTATGGAATGACAAACTAAGTTCAATACTGATAGAGTTGTATTCTGTGTATACATATAATAGAGTATATACTGTGTGTATAAAAAATTCAAGCATATGGAAAAACTTATTTAATCCAGTAATAAACCTTTATATTTCTTGCATTAAAAATGTTAAGTTACTTATAATCCAATTTAAATGTAAGTTCAAATACCTTAACATGTTCACATTACTTTTTTAATTCACAAAAACGTTCTTATCTATCTTTATTTTAAGATGTTTTCCACATACATGCTTAGTGAATTTTCT	TR:VR	20:4	21:0
chr18	74982340	r_54	T	<DUP>	.	PASS	END=80126310;SVTYPE=DUP;SVLEN=5143970	TR:VR	33:10	37:0
chr5	28143833	d_631	G	<DEL>	.	PASS	END=28145024;SVTYPE=DEL;SVLEN=-1191	TR:VR	15:3	26:0
chr12	78077305	i_95	T	<INS>	.	PASS	END=78077305;SVTYPE=INS;SVINSLEN=238;SVINSSEQ=TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTTATTTATTTATTTATTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAACGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGA	TR:VR	36:9	29:0
chr14	88975675	i_127	T	<INS>	.	PASS	END=88975675;SVTYPE=INS;SVINSLEN=499;SVINSSEQ=AGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTATAAATAAGTATAATAAATAAATAAAAAAAAATAAATAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAA	TR:VR	26:8	34:0
chr22	15740077	i_413	T	<INS>	.	PASS	END=15740078;SVTYPE=INS;SVINSLEN=107;SVINSSEQ=TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACAAAA	TR:VR	24:8	24:0
chr17	45583235	r_39_0	A	[chr9:107775291[G	.	PASS	SVTYPE=BND;MATEID=r_39_1	TR:VR	60:3	66:1
chr9	107775291	r_39_1	G	[chr17:45583235[G	.	PASS	SVTYPE=BND;MATEID=r_39_0	TR:VR	60:3	66:1
chr2	21370462	r_60	T	<DUP>	.	PASS	END=21390948;SVTYPE=DUP;SVLEN=20486	TR:VR	50:4	44:0
chr2	21370750	r_61	A	<DEL>	.	PASS	END=21389588;SVTYPE=DEL;SVLEN=-18838	TR:VR	48:5	47:0
chr10	119865007	i_49	T	<INS>	.	PASS	END=119865007;SVTYPE=INS;SVINSLEN=510;SVINSSEQ=AAACAAATGTCAATTAGATCTACTTGGTTGACAGTGTTGTGTAGTTTTGTGTTGTTCAGTAGGTTTACAATTTTATTGATTTTTTTTTTTTTTAAAAAGAGCTTTGAGTTTCACTGATTTTTTCTTTTTTTTCTGTTTTCTATTTCATGGATTTTTGTTCTCTATTATTTCTTTCTTCTGTTTAATTTGGGTTTATTTTGCTCTTCATTTCTAGTTTCATAGGTGGAAGCTTAAATTATTCACTTGAGACCTTCTCTTCTAATTAAGGCAGCTAATGCATCTAAGCACGTCTTTGGCTGTATCCCACAAATTTTGGTATGTTGAGTTTTCATTTTGGTTTAGTTCACAATATTCAAAGCTTTCCTTTGAGAGTTTTTAATCCATGGATTATTTAGAAGTGTTCTTCTTATATATAAAGTTTACTATTTGGTTTATGACCCAGAATGTGGTTTATCTTGGTGAATTTACATGTGCACTTGAAAAGAATGTGTATTCTGCTGTCATTAGTAA	TR:VR	29:4	26:0
chr6	32535504	d_654	C	<DEL>	.	PASS	END=32535579;SVTYPE=DEL;SVLEN=-75	TR:VR	52:3	35:0
chr19	14763987	i_259	T	<INS>	.	PASS	END=14763988;SVTYPE=INS;SVINSLEN=1469;SVINSSEQ=CCTCCTCCTCCTCCTCCTCCTCTCCTCTTCCTCCTCCTCCTCCCCTCCTCCTCTCCTCCTCCTCCTCCTCCTCCCCCTCCTCCTCCTCTCCTCCTCCTCTCTCCTCCTCCTCCTCCTCCTTCCCTTCCTCCTCCTCTCCTCCCCTTCCTCCTCCTCTTCTCCTCCTCCTCTCCTCTTCTCCTCCTCCTCCTCTTCCTCCTCTCCTCCTCCTCCTCTCCTGCCCCTCTCCTCCTCCTCTCCTCCTCCTCTCCTCCTCCTCTCCTCTCCTCCTCCCTCCTCCTCCTCTCCTCCTCCTCTCTTCCTCCTCCTCCTCCTCCTCCTCCTCTCTTTTCCTCTCCTCCTCCTCTCTTCCTTCTCTCCTCCTCTCCTCTTCCTCTCCTTCTCCTCTCCTCTTCCCTGCTCCTCTCGTCCTCCCCCCCTCCTCCTCCCCCTCTCCTCCTCCCCCTCTCCTCCTCCCCCTCTCCTCCTCCCCCTCTCCTCCTCCCCCTCTCCTCCTCCCCCTCCTCCTCCTCCTCTCCTCCTCTCTTCCTCTCCTCTCCTCCCTCTCTTCCTCCTCTCCTCCTCCTCTCCTCTTCCTCTCCTTCTCCTCTCCTCATCCTGCTCCTCTGCGTCCTCCTCTCCCTCCTCCTTCTCTCCTCTTCCCTGCTCCTCTCGTCCTCCTCTCGTCCTCCTCTCCTCCTCCTCTCCTCTTCCTCTCCTGCCCCTCCTCCTCCCTGCTCCTCCTCCTCTCCTCCCTCCTCCCCCTCCTCCTCCTCCTCTCCTCCCCCTCCTCCTCTCCTCCCCTTCCTCCTCCCTCTCTTCTCCTCCTCCTCTCCTCTTCCTCTCCTCCTCCTCTCTTCCTCTCTCCTCCTCCTCCTCTTCTTTTCCTCTCCTCCTCCTCTCTTCTCTCCTCCTCTCCTCTTCTCTCCTTCTCCTCTCCTCCTCTCTGCTCCTCTCGTCCTCCTCCTCCTCCTCTTTTCCTCCTCATCCTGCTCCTCTCGTCCCCTCTCTCTGCCTCCTCCCTCTCCTCCTTGTCTCTCCCTCCCCTCCTCCTCTCCTCTTCCTCCTCTTCTCCTCCTCCCCCTCCTCCTCCCCTCTCCTCCTCTCTCTGTCTCCTCCTTCCTCTCTCCTCCCTCTCTCCTCCTCCTCCTCCTCTCCTCCTTCCCCTCTCCTCCTCCCTCATCCTCCTCATCCTCCTCATCCTCTCCTCCCCCTCCTCCTCTCTCCTCCTCCCCTCCTCCTCCCTCTCCTCCTCCTCCTCTCCTCCTCCTTTCCTCTCCTCCTCTCTTTCTCCATTCTCTCCTCTTCCTCTCCTCCTCCTCCTTCTCTCCTCCTCATCCTCCTCCTCCCCGTCCTCGTCCTCCTCCTTCGTCCTCTTCCTCTTGTCTCGTCCTCCCTCCTCATCCTCTCATTTCCCTCCTCTTCCTCCTCCTCCCTCCTCTCCTCCTGTCCTCCCCCTCCTCTCCTCCCTCCTCCTCCTCTCCTCCCCT	TR:VR	30:4	36:1
chr8	2191512	i_603	C	<INS>	.	PASS	END=2191512;SVTYPE=INS;SVINSLEN=2295;SVINSSEQ=CCCCTCTCCCTTCCCCTCCTTCCCCTCCCTTCCCCCTCCCTTCCCCTCCCTTCCTCCCCTCCCTCCCTTCCCCTCCCTTCCCCCTCCCTCCCTTCCTCCCTCCCTTCCTCCCTCCCCTCCCCTTCCCCCTCCCTTCCCCTCCCTTCCCCCCTCCCTTCCCCTCCCTTCCCCCTCCCTTCCCCTCCCTCCCTTCCTCCCTTCTCCCTTCCCCTCCCCTTCCCCTCTCTTCCCCTCCCTCCCTTCCTCCCCTTCCCCCTCCCTTCCCCTCCCTTCCCCCCTTCCCTCCCTTCCCCTCCCTTCCCTTCCCTCCCCTCCCCCCCCCCCCCTCCCTTCCCCTCCCCTCCCTCCCTCCCTTCCCCCTCCCTTCCCTCCCCTTCCCCCCTCCCTTCCCCTCCCTTCCCCTCCCTTCCCCTCCCTTCCCCCTCCCTCCCTTCCTCCCTTCCCCTCCCTTCCCCTCCCCCCTCCCTTCCCCCTCCCTTCCTCCCTCCCTTCCTCCCTTCCCCTCCCTTCCCCTCTCCCTTCCCCTCCCTTCCCCTCCCTTCCCCCTCCCCTTCCCCCCTCCCTTCCCCTCTCCTCTCCCTCCCCTTCCTCCCTTCCCTCCCTTCCCCTCCCTTCCCCTCCCTTCCCCTCCCTTCCCCCCTCCCTTCCTTCCTCCCTTCCCCTCCCTTCCCTCCCTTCCTTCCTCCCTTCCCCTCCCTTCCCCCCTCCCTCCCTTCCTCCCTTCCCTCCCTTCCCTTCCCTCCCTTCCCCCTCCCTTCCCCTCCCTCCCTTCCCCCTCCCCCTCCCTTCCCTCCCTCCCTCCCTTCCTCCCTCCCTTCCCCTCCCTTCCCTCCCTTCCCCTCCCTTCCCTCCCTTCCTCTCTCCCTCCCCCCCCTCCCTTCCCTCCCTTCCCTCCTCCCTCCCCTCCCTCCCTCCCTCCCTTCCCCCCCCTCCCTTCCCTCTCCTTCCCCCCCTTCCTCCCTTCCCTCCCTTCCCTCCCCTCCCTTCCTCCCTTCCTCCCTCCCTTCCCCCTCCCTTCCCTCCCTCCCTCCCTTCCTCCCTTCCCCCCTCCCTTCCCCTCCCTTCCCCTCCCTTCCCTCCCCTCCCTTCCCCCTCCCTTCCTTCCCTCCCTCCCTTCCCTCCCCTCCCCTCCCTTCCCTCCCTTCCCCTCCCTTCCCCTCCCTTCCCCCCTCCCTTCCCCCCTCCCTCCCTTCCCTTCCCTCCCTTCCCCCCTCCCTTCCCCTCCCTTCCCCTCCCTTCCTCCCTCCCTTCCTCCCCTCCCTTCCCTCCTCCCTTCCCCTCCCTTCCCCTCCCTTCCCCCTCCCTTCCCCCTCCCCTTCCCCCTCCCTTCCCCCTCCCTTCCCCCTCCCTCCCTCCCCTCCCTTCCCTCCCTTCCCCCTCCCTTCCCCTCTCCCTTCCCCTCCCCTTCCCCCTCCCTTCCCCTCCTCCCTCCCTCCCTTCCCCCTCCCTCCCTTCCTCCCTCCCTTCCCTCCCTTCCCCTCCCCTTCCCCTCCCTTCCCTCCCTCCTCCCTCCCTTCCCCCTCCCTTCCCCTCCCCTTCCCCTTCCCTCCCTTCCCTCCCTTCCTCCCTCCCTTCCCCCTTCCCTTCCTTCCCCTCCCTTCCCTCTCCCTTCCCCTCCCTTCCCCCTCCCTTCCCCTTCCCCCTCCCTCCCTCCCTCCCTCCCTTCCTCCCTTCCCCTCCCTTCCCCTCCCTTCCTCCCTCCCTTCCCTCCTCCTCCCCTCCCTTCCCCTCCCTTCCCCTCCCTTCCCCTCCCTCCCTCCCTCCCTTCCCCTCCCTTCCCCTCCCCTCCCTTCCCCTCCCTTCCCCCTCCCTTCCCCCCCCTCCCTTCCCCCTCCCTTCCTCCCTTCCCCTCCCTCCCTTCCTCCCTTCCCCTCCCCTCCCCTTCCTCCTCCCTTCCCCTCCCTTCCCTCCCTTCCCCTCCCTTCCCCTCCCTTCCCCTCCCTCCCTTCCTCCCTTCCCTCCCTTCCCCTCCCTTCCCCTCCCTTCCCCCCTCCCTTCCCCCTCCCTTCCCCTCCCTCCCTCCCTCCCTCCCCCCCCCTCCCTCCCTCCCTTCCTCCCTCCTTCCCTCCCTTCCCTCCCTCCCTTCCCTCCCTTCCTCCCTCCCTCCCTCCCTTCCCCTTCCCTCCCTTCCCCTCCCTTCCCCCTCCCCTTTCCCCCCTCCCTCCCTCCCCTCCCTCCCTTCCCCCTCCCTTCCCTCCCTTCCCCCCTCCCTTCCCCCCCTCCCTTCCCCCTCCCTTCCCCTCCCTTCCCCTCCCCTCCCCTCCCTCCCTCCCTTCCCTTCTTCCTTCCTCCCTT	TR:VR	55:3	53:0
chr7	19573333	i_568	T	<INS>	.	PASS	END=19573333;SVTYPE=INS;SVINSLEN=235;SVINSSEQ=TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTTTTATTTATTTATTTATTTTTTTTCCTTTCTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCACTGCACCCACTAATGTGTCATCTAGCAT	TR:VR	25:7	18:0
chr4	46793011	i_468	G	<INS>	.	PASS	END=46793011;SVTYPE=INS;SVINSLEN=192;SVINSSEQ=TATAATAAAAAAAAAAAAATTAAAAAAAAAAATAAAAATAAATAAAAATGAAATTACTGTATTGGCTACTACAAAAAAACATGAGTGAATAAACATACACACACACACACACACACACACAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	TR:VR	17:5	26:0
chr8	41140461	r_123_0	A	[chr8:41142733[G	.	PASS	SVTYPE=BND;MATEID=r_123_1	TR:VR	22:5	27:0
chr8	41142733	r_123_1	G	[chr8:41140461[G	.	PASS	SVTYPE=BND;MATEID=r_123_0	TR:VR	22:5	27:0
chr20	1259257	i_356	G	<INS>	.	PASS	END=1259257;SVTYPE=INS;SVINSLEN=131;SVINSSEQ=TTTCCTTCTAGGTAACTGGTTTGAGATCTTCCCTCTTTTCTAATATAAACACATAAAGCTCTGTTTCCTTCTAGGTAACTGATTTGAGATCTTCCCTCTTTTCTAATATAAACACATAAAGCTCTGTTTCC	TR:VR	25:4	23:0
chr20	14732464	r_68	T	<DEL>	.	PASS	END=15099193;SVTYPE=DEL;SVLEN=-366729	TR:VR	41:8	45:0
chr20	64127544	d_518	G	<INS>	.	PASS	END=64127597;SVTYPE=INS;SVINSLEN=53;SVINSSEQ=ATTACCACAGCTTTATACGCAAATACCACACTGTCTTGATTACTATAGCTTTA	TR:VR	41:3	17:0
chr5	64020927	i_502	C	<INS>	.	PASS	END=64020927;SVTYPE=INS;SVINSLEN=104;SVINSSEQ=AATTTACACTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTTTCTCATCAGTTTAATAATAACATTTTTTGCCAGTAATGACTA	TR:VR	27:7	26:0
chr19	27331038	d_371	C	<INS>	.	PASS	END=27331096;SVTYPE=INS;SVINSLEN=124;SVINSSEQ=AAAAGTTCTCTCTCAAAAGGAAGGTTCAACTCTGTGAGTTGAATGCACACATCACAAGGCAGTTTCTGAAAATGCTTCCGTCTAGTTTTTATTTGAAGGTATTTCCTTTTCCTTCTTCGGCCTC	TR:VR	35:5	28:0
chr8	47616361	i_607	T	<INS>	.	PASS	END=47616361;SVTYPE=INS;SVINSLEN=62;SVINSSEQ=TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGT	TR:VR	29:9	18:0
chrX	1198451	i_687	T	<INS>	.	PASS	END=1198451;SVTYPE=INS;SVINSLEN=364;SVINSSEQ=CCCACCTCCTAGGAAGGCAGGACACCCTCCCTCCCACCTCCCAGGAAGGCAGGACACCCTCCCCTCCCCACCTCGAAGGCAGGACAGCCTCTCCCTCCCACCTCCCGGGAAGATAGGACACCCTCTCCCCCTCCCCCTCCCACCTCCCGGGAAGACAGGACACCCTCCCCCTCCCACCTCCCAGGAAGGCAGGACACCCCTCCCTCCCACCTCGAAGGCAGGACAGCCTCCCTCCCACCTCCCGGGAAGATAGGACACCCCCTCCTCCCACCTCCCGGGAAGACAGGGACACCCTTCTCCTCCCACCTCGAAGGCAGGACACCCTCCCTCCCACCTCCCAGGAAGGCAGGACACCCTCCCTCCC	TR:VR	24:3	13:0
chrY	11318200	d_838	A	<DEL>	.	Too_low_VAF	END=11319231;SVTYPE=DEL;SVLEN=-1031;SVINSLEN=4;SVINSSEQ=GTAT	TR:VR	715:4	669:1
chr14_GL000225v1_random	101763	d_217	C	<DEL>	.	Too_low_VAF	END=101978;SVTYPE=DEL;SVLEN=-215;SVINSLEN=10;SVINSSEQ=CTACAGGGTT	TR:VR	560:4	591:1
chr22	35574229	d_552	C	<DEL>	.	PASS	END=35574287;SVTYPE=DEL;SVLEN=-58	TR:VR	21:4	22:0
chr5	88055949	r_94_0	A	[chrX:104082044[T	.	PASS	SVTYPE=BND;MATEID=r_94_1	TR:VR	37:3	51:0
chrX	104082044	r_94_1	T	[chr5:88055949[T	.	PASS	SVTYPE=BND;MATEID=r_94_0	TR:VR	37:3	51:0
chr3	198173771	i_461	A	<INS>	.	Too_low_VAF	END=198173771;SVTYPE=INS;SVINSLEN=446;SVINSSEQ=GGGTTAGGAGTTGAAAAAAGGTTAGGGTTGAAGGTTAAAGGTTAGGGTTAAAGGTTAGGGTTAAGGTTAAAGGTTAAAATTAAAATTAAAATTTAAAGTTAAAATTAAAGTTAGGAAGTTAAAATTAAAATTAAAGTTAAAATTAAAGTTAAAATTAAAAATTAGGAATTAAAATTAAAAATTAAAATTAAAATTAAAATTAAAATTAAAATTAAATTGGGGTTCGGAATTACGAAATTACAAATTAAAATTAAAATTCGGAGTTAAAAAAATTAAAATTAAAAAATTTAAAATTGAAAATTAGGGATTAAAAAAATTAAAAAAATTAAAATTAAAATTAAAATTAAAATTAAAATTAAAATTAAAATTTGAGGTTGGGGTTAGGGTTGGGGTTAAGGGTGAGGAGGTGGCTAGGTTAGCGAGATTTAGGGTTGGGGTTGGGGTTA	TR:VR	201:3	357:0
chr5	94310479	i_503	T	<INS>	.	PASS	END=94310479;SVTYPE=INS;SVINSLEN=271;SVINSSEQ=TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTTATTTATTTATTTATTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTTACTTATAT	TR:VR	19:4	36:0
chr4	49280752	i_469	A	<INS>	.	Too_low_VAF	END=49280752;SVTYPE=INS;SVINSLEN=472;SVINSSEQ=AGGGCCGAGTCCCGCCAGACAGGCCTCCCACACTCGTAACAACCGGAAGCCCTACATTGTTTTACCTGTGCTTCTCAGCAACTGCCTATAAATTAGGTTGCTGCCACTCCCAGATTTAGTTGCATTCATTGGCTGGAAGAGCTCACAGCACGTAGGGAAACACTTACATTTGCCGTTGTATTTTAGCGGACATTGCAAAAGTTCAGAAATAAATGTGGGGCCCGGCATGTGGGGAGGGGCGCACTGCCTTCCAGGAAGTGTTATCCAGAAGCTCCCTGAACCCAGTCCTTTTGGGTTTTTATGGAGACCTCATTCTATAGGCATGATGGGTTAAACCATAGGCTATTGGTGATCAACTCCACCTGAGGCTCTCAACCCTCCCTGGAAATTGGGGTTGAGGCTTTGCCATTCTCAGTCTGACTAAAAGAAGTTACCCAAACGGAATTTTAAAACAGATGAGCATAACTGGACT	TR:VR	277:4	428:0
chr6	50599070	r_102	A	<DUP>	.	PASS	END=74891290;SVTYPE=DUP;SVLEN=24292220	TR:VR	49:4	55:0
chr6	53029315	r_103_0	T	[chr6:69272207[T	.	PASS	SVTYPE=BND;MATEID=r_103_1	TR:VR	69:6	50:0
chr6	69272207	r_103_1	T	[chr6:53029315[T	.	PASS	SVTYPE=BND;MATEID=r_103_0	TR:VR	69:6	50:0
chr8	63330763	d_729	A	<DEL>	.	PASS	END=63330838;SVTYPE=DEL;SVLEN=-75	TR:VR	33:8	36:0
chr6	107651252	i_532	G	<INS>	.	PASS	END=107651274;SVTYPE=INS;SVINSLEN=100;SVINSSEQ=TGAGACCCTGTCTTAAAAAAGAAAAAATGCTGAGATAGTCCAAAAGCTAAACCTCTTGGGTCAGTTAGCCAAGTAGTGAATGCAAAGGAAGAGTTAAGGA	TR:VR	40:3	29:0
chrX	125563090	i_705	C	<INS>	.	PASS	END=125563091;SVTYPE=INS;SVINSLEN=232;SVINSSEQ=TTTCACTGCAAGCCTCCCAGGTTTAAGCGATTCTCCCGCCTCAGCTTCCAGAGTAGTTGGGACTACAGGCACACGCCACCACACCCAGCTAATTTTTATATGTTTAATAGAGATGGGGTCTCACTATGTTGGCCAGGATGGTCTTGATCTTTTGACCTCGTGATCTGCCCGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTCAGGCACCGCGCCCAGCCAAGGAGGCT	TR:VR	13:5	15:0
chr11	45546291	r_10_0	C	C[chr17:31609927[	.	PASS	SVTYPE=BND;MATEID=r_10_1	TR:VR	40:5	50:0
chr17	31609927	r_10_1	T	]chr11:45546291]T	.	PASS	SVTYPE=BND;MATEID=r_10_0	TR:VR	40:5	50:0
chr16	60422755	r_32	G	<DEL>	.	PASS	END=65047678;SVTYPE=DEL;SVLEN=-4624923	TR:VR	62:8	50:0
chr19	39916916	d_374	C	<DEL>	.	PASS	END=39917532;SVTYPE=DEL;SVLEN=-616	TR:VR	18:6	19:0
chr11	46299024	r_11_0	A	]chr17:31360130]A	.	PASS	SVTYPE=BND;MATEID=r_11_1	TR:VR	52:4	35:0
chr17	31360130	r_11_1	A	A[chr11:46299024[	.	PASS	SVTYPE=BND;MATEID=r_11_0	TR:VR	52:4	35:0
chr16	62452781	d_316	G	<DEL>	.	PASS	END=62452949;SVTYPE=DEL;SVLEN=-168	TR:VR	19:7	24:0
chr19	4337411	r_55_0	T	TTTTTTTTTTTTTT[chr5:142074653[	.	PASS	SVTYPE=BND;MATEID=r_55_1;SVINSLEN=13;SVINSSEQ=TTTTTTTTTTTTT	TR:VR	45:4	42:0
chr5	142074653	r_55_1	T	]chr19:4337411]AAAAAAAAAAAAAT	.	PASS	SVTYPE=BND;MATEID=r_55_0;SVINSLEN=13;SVINSSEQ=AAAAAAAAAAAAA	TR:VR	45:4	42:0
chr3	60324415	r_75	T	<DEL>	.	PASS	END=60374877;SVTYPE=DEL;SVLEN=-50462;SVINSLEN=2;SVINSSEQ=AC	TR:VR	27:4	45:0
chr6	123056758	i_535	T	<INS>	.	PASS	END=123056758;SVTYPE=INS;SVINSLEN=316;SVINSSEQ=AAGATTTCTTTTGGTAGGTGGGAATTGAACAATGAGATCACATGGACACATGAAGGGGAATACCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAAGGCTAGATGACGAGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAAAGTATAATAAAAAAAAAAAACCTTCCAAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	TR:VR	30:3	21:0
chr14_GL000225v1_random	85592	d_196	C	<DEL>	.	Too_low_VAF	END=86822;SVTYPE=DEL;SVLEN=-1230;SVINSLEN=5;SVINSSEQ=CCTTG	TR:VR	712:3	658:1
chr21	12998105	r_70_0	T	TAAAGAGTTTCTGCACAGCTATTTCCTTCTCTAACATAGGCTGCAAAGCGCTCCAAATGCTCACTTAGAGAATCTACAAAAAGAGTGTTTCAAAATTCGCAATCAAAAGAAATGTTCAACTCTGTGAGATGAATGCACAGATCACAAAG]chr9:43202942]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_70_1;SVINSLEN=148;SVINSSEQ=AAAGAGTTTCTGCACAGCTATTTCCTTCTCTAACATAGGCTGCAAAGCGCTCCAAATGCTCACTTAGAGAATCTACAAAAAGAGTGTTTCAAAATTCGCAATCAAAAGAAATGTTCAACTCTGTGAGATGAATGCACAGATCACAAAG	TR:VR	89:4	67:0
chr9	43202942	r_70_1	T	TCTTTGTGATCTGTGCATTCATCTCACAGAGTTGAACATTTCTTTTGATTGCGAATTTTGAAACACTCTTTTTGTAGATTCTCTAAGTGAGCATTTGGAGCGCTTTGCAGCCTATGTTAGAGAAGGAAATAGCTGTGCAGAAACTCTTT]chr21:12998105]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_70_0;SVINSLEN=148;SVINSSEQ=CTTTGTGATCTGTGCATTCATCTCACAGAGTTGAACATTTCTTTTGATTGCGAATTTTGAAACACTCTTTTTGTAGATTCTCTAAGTGAGCATTTGGAGCGCTTTGCAGCCTATGTTAGAGAAGGAAATAGCTGTGCAGAAACTCTTT	TR:VR	89:4	67:0
chr22	46479633	r_73_0	G	]chr6:32577434]TTTTTTTTCAT	.	Too_low_VAF	SVTYPE=BND;MATEID=r_73_1;SVINSLEN=10;SVINSSEQ=TTTTTTTTCA	TR:VR	79:3	84:1
chr6	32577434	r_73_1	T	TTGAAAAAAAA[chr22:46479633[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_73_0;SVINSLEN=10;SVINSSEQ=TGAAAAAAAA	TR:VR	79:3	84:1
chr3	60414707	d_581	G	<DEL>	.	PASS	END=60417757;SVTYPE=DEL;SVLEN=-3050	TR:VR	17:6	21:0
chr6	123245071	d_663	G	<DEL>	.	PASS	END=123245167;SVTYPE=DEL;SVLEN=-96	TR:VR	25:3	28:0
chr8	69129575	i_611	G	<INS>	.	Too_small_size	END=69129576;SVTYPE=INS;SVINSLEN=42;SVINSSEQ=CGCCTCCCGCGCCTCCGCGCCTCCGCGCCTCCGTCCTCCGCG	TR:VR	27:4	39:0
chr13	19796302	r_18_0	G	]chrUn_GL000216v2:83654]CATTCCATTCCATGCCATTCAACTCCATTCCATTTCATTCTATTCCATTCCAGAGAAC	.	Too_low_VAF	SVTYPE=BND;MATEID=r_18_1;SVINSLEN=57;SVINSSEQ=CATTCCATTCCATGCCATTCAACTCCATTCCATTTCATTCTATTCCATTCCAGAGAA	TR:VR	136:5	136:1
chrUn_GL000216v2	83654	r_18_1	C	CTTCTCTGGAATGGAATAGAATGAAATGGAATGGAGTTGAATGGCATGGAATGGAATG[chr13:19796302[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_18_0;SVINSLEN=57;SVINSSEQ=TTCTCTGGAATGGAATAGAATGAAATGGAATGGAGTTGAATGGCATGGAATGGAATG	TR:VR	136:5	136:1
chr3	60488801	r_76	A	<DEL>	.	PASS	END=60569837;SVTYPE=DEL;SVLEN=-81036	TR:VR	40:7	42:0
chr6	139715782	d_664	C	<DEL>	.	PASS	END=139717847;SVTYPE=DEL;SVLEN=-2065	TR:VR	37:10	29:0
chr16	78405414	r_33	T	<DEL>	.	PASS	END=78509542;SVTYPE=DEL;SVLEN=-104128	TR:VR	48:3	59:0
chr6	60390450	r_105	A	<DEL>	.	PASS	END=69026533;SVTYPE=DEL;SVLEN=-8636083	TR:VR	53:5	59:0
chr7	53727504	i_571	T	<INS>	.	PASS	END=53727504;SVTYPE=INS;SVINSLEN=159;SVINSSEQ=AAGTTGACTGTGCATGTCCTAGATGGCTCCCCACTTCCTGTTGGCCCTGGGAGGCATGCTGCCCTCTTCTCTCTGGCATCTGTAAGTAATAAACTGCTGTTATTTCTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	TR:VR	31:10	37:0
chrX	152155199	i_706	T	<INS>	.	PASS	END=152155199;SVTYPE=INS;SVINSLEN=343;SVINSSEQ=TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTTATTTATTTATTTATTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAACGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGA	TR:VR	18:11	23:0
chr3	60580818	r_77	T	<DEL>	.	PASS	END=60741934;SVTYPE=DEL;SVLEN=-161116	TR:VR	36:5	49:0
chr6	60396751	r_106_0	T	[chr6:74901212[G	.	PASS	SVTYPE=BND;MATEID=r_106_1	TR:VR	53:7	46:0
chr6	74901212	r_106_1	G	[chr6:60396751[G	.	PASS	SVTYPE=BND;MATEID=r_106_0	TR:VR	53:7	46:0
chrX	153158868	d_823	C	<DEL>	.	PASS	END=153160233;SVTYPE=DEL;SVLEN=-1365	TR:VR	16:8	13:0
chr11	85732801	d_89	G	<DEL>	.	PASS	END=85733205;SVTYPE=DEL;SVLEN=-404	TR:VR	30:4	35:0
chr3	61044701	r_78	T	<DEL>	.	PASS	END=61173461;SVTYPE=DEL;SVLEN=-128760	TR:VR	43:6	56:0
chr6	147765197	r_110	T	<DUP>	.	PASS	END=147778254;SVTYPE=DUP;SVLEN=13057	TR:VR	48:5	31:0
chr10	27486966	r_1_0	A	AAAAAAAAAGT]chr12:11139784]	.	PASS	SVTYPE=BND;MATEID=r_1_1;SVINSLEN=10;SVINSSEQ=AAAAAAAAGT	TR:VR	57:4	41:1
chr12	11139784	r_1_1	G	GACTTTTTTTT]chr10:27486966]	.	PASS	SVTYPE=BND;MATEID=r_1_0;SVINSLEN=10;SVINSSEQ=ACTTTTTTTT	TR:VR	57:4	41:1
chr3	6166868	d_576	G	<DEL>	.	PASS	END=6168559;SVTYPE=DEL;SVLEN=-1691	TR:VR	24:5	23:0
chr6	150820318	r_111	G	<DEL>	.	Too_low_VAF	END=150854100;SVTYPE=DEL;SVLEN=-33782	TR:VR	75:3	58:0
chr10	36644163	d_68	T	<DEL>	.	Too_small_size	END=36644204;SVTYPE=DEL;SVLEN=-41	TR:VR	24:4	16:0
chr6	68716288	r_107	A	<DUP>	.	PASS	END=68732565;SVTYPE=DUP;SVLEN=16277	TR:VR	55:7	34:0
chr13	35334169	r_19	T	<DEL>	.	PASS	END=35337787;SVTYPE=DEL;SVLEN=-3618	TR:VR	45:6	27:0
chr7	57890730	r_117_0	A	]chrUn_KI270442v1:173361]CTATGGTGGAAACGGAAACATCTTCAAATTCAATAATACTACACAGAAGCATTCAGAGAAACTTCTTTGTGATGAGTGCATTCATCACACAGAGTTGAACCTTTCTTTTGATTGAGCAGTTTTGAAACACTCTCTTTGTGATATGAAGATATTTCCATTTCTACCATAGGCCACAAAGTATTCAAAATGTCCACCTGCAGATTCTACAAAAAGAGTGTTTCCGAACTCCTCAATCAAAAGAAAGGTTCAACTCTGTGAGATGAACGCAAACGTCC	.	Too_low_VAF	SVTYPE=BND;MATEID=r_117_1;SVINSLEN=274;SVINSSEQ=CTATGGTGGAAACGGAAACATCTTCAAATTCAATAATACTACACAGAAGCATTCAGAGAAACTTCTTTGTGATGAGTGCATTCATCACACAGAGTTGAACCTTTCTTTTGATTGAGCAGTTTTGAAACACTCTCTTTGTGATATGAAGATATTTCCATTTCTACCATAGGCCACAAAGTATTCAAAATGTCCACCTGCAGATTCTACAAAAAGAGTGTTTCCGAACTCCTCAATCAAAAGAAAGGTTCAACTCTGTGAGATGAACGCAAACGTC	TR:VR	133:5	136:1
chrUn_KI270442v1	173361	r_117_1	C	CGACGTTTGCGTTCATCTCACAGAGTTGAACCTTTCTTTTGATTGAGGAGTTCGGAAACACTCTTTTTGTAGAATCTGCAGGTGGACATTTTGAATACTTTGTGGCCTATGGTAGAAATGGAAATATCTTCATATCACAAAGAGAGTGTTTCAAAACTGCTCAATCAAAAGAAAGGTTCAACTCTGTGTGATGAATGCACTCATCACAAAGAAGTTTCTCTGAATGCTTCTGTGTAGTATTATTGAATTTGAAGATGTTTCCGTTTCCACCATAG[chr7:57890730[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_117_0;SVINSLEN=274;SVINSSEQ=GACGTTTGCGTTCATCTCACAGAGTTGAACCTTTCTTTTGATTGAGGAGTTCGGAAACACTCTTTTTGTAGAATCTGCAGGTGGACATTTTGAATACTTTGTGGCCTATGGTAGAAATGGAAATATCTTCATATCACAAAGAGAGTGTTTCAAAACTGCTCAATCAAAAGAAAGGTTCAACTCTGTGTGATGAATGCACTCATCACAAAGAAGTTTCTCTGAATGCTTCTGTGTAGTATTATTGAATTTGAAGATGTTTCCGTTTCCACCATAG	TR:VR	133:5	136:1
chr16	88763396	d_320	G	<DEL>	.	PASS	END=88763796;SVTYPE=DEL;SVLEN=-400	TR:VR	20:8	18:0
chr2	4802927	d_386	G	<DEL>	.	Too_small_size	END=4802965;SVTYPE=DEL;SVLEN=-38	TR:VR	30:7	17:0
chr4	60265204	d_615	G	<DEL>	.	PASS	END=60265343;SVTYPE=DEL;SVLEN=-139	TR:VR	24:9	30:0
chr1	150265599	d_50	C	<DEL>	.	Too_small_size	END=150265634;SVTYPE=DEL;SVLEN=-35	TR:VR	21:5	15:0
chr13	38526701	i_105	T	<INS>	.	PASS	END=38526701;SVTYPE=INS;SVINSLEN=654;SVINSSEQ=AAGAAATATCTAGTGCCCCAGCCATCCCATTACTGGGTATATACCCAAATGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATGTCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAATAAAAAAAAAAAATAAAAATAAATAAAAATGAAATTACTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	TR:VR	34:5	21:0
chr2	60772288	i_287	T	<INS>	.	PASS	END=60772288;SVTYPE=INS;SVINSLEN=1229;SVINSSEQ=AAAAAACATTTAGTTGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCGAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAATGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTTTTAAATTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	TR:VR	18:8	22:0
chr6	73619843	r_108_0	T	]chr8:41179725]A	.	PASS	SVTYPE=BND;MATEID=r_108_1	TR:VR	48:4	55:0
chr8	41179725	r_108_1	A	A[chr6:73619843[	.	PASS	SVTYPE=BND;MATEID=r_108_0	TR:VR	48:4	55:0
chr1	157701336	d_51	T	<DEL>	.	PASS	END=157701529;SVTYPE=DEL;SVLEN=-193	TR:VR	16:6	25:0
chr4	60428026	d_617	T	<DEL>	.	PASS	END=60428401;SVTYPE=DEL;SVLEN=-375	TR:VR	35:12	28:0
chr6	73619969	r_109_0	G	G]chr8:41180148]	.	PASS	SVTYPE=BND;MATEID=r_109_1	TR:VR	47:4	55:0
chr8	41180148	r_109_1	G	G]chr6:73619969]	.	PASS	SVTYPE=BND;MATEID=r_109_0	TR:VR	47:4	55:0
chr3	75669597	r_79_0	G	GTT[chrY:11309246[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_79_1;SVINSLEN=2;SVINSSEQ=TT	TR:VR	554:3	575:0
chrY	11309246	r_79_1	G	]chr3:75669597]AAG	.	Too_low_VAF	SVTYPE=BND;MATEID=r_79_0;SVINSLEN=2;SVINSSEQ=AA	TR:VR	554:3	575:0
chr6	157571450	d_668	G	<DEL>	.	Too_small_size	END=157571490;SVTYPE=DEL;SVLEN=-40	TR:VR	33:6	24:0
chr6	92721791	d_661	C	<DEL>	.	PASS	END=92724662;SVTYPE=DEL;SVLEN=-2871	TR:VR	48:7	37:0
chr6	94642565	i_530	T	<INS>	.	PASS	END=94642565;SVTYPE=INS;SVINSLEN=515;SVINSSEQ=AAGTTACTTATAATCCAATTTAAATGTAAGTTCAAATACCTTAACATGTTCACATTACTTTTTTAATTCACAAAAACGTTCTTATCTATCTTTATTTTAAGATGTTTTCCACATACATGCTTAGTGAATTTTCTTTTAGGAGATGTAAGAGAGTCTACAAATCTTTATTCTACTATTTCCCAAAATATACCCAATTACTGGCAAAAAATGTTATTATTAAACTGATGAGAAAATATAAAGGTTTATTACTGGATTAAATAAGTTTTTCCATATGCTTGAATTTTTTATACACACAGTATATACTCTATTATATGTATACACAGAATACAACTCTATCAGTATTGAACTTAGTTTGTCATTCCATAAAATGGCCATAGATGGCCAGATCAAGTAATCCTACTCATTTTACCCTGTATTACTGAAAATAAAAATGGGGGGGGGGGGGCAAATAAAGACTTTAATATCTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	TR:VR	39:8	27:0
chr4	67529184	d_618	T	<DEL>	.	PASS	END=67529266;SVTYPE=DEL;SVLEN=-82	TR:VR	11:3	24:0
chr13	65548792	r_21	C	<DEL>	.	PASS	END=65560407;SVTYPE=DEL;SVLEN=-11615	TR:VR	47:5	35:0
chr2	78331487	r_63	A	<DUP>	.	PASS	END=78346656;SVTYPE=DUP;SVLEN=15169	TR:VR	40:4	41:0
chr3	88973182	r_80_0	G	]chrX:121267978]A	.	PASS	SVTYPE=BND;MATEID=r_80_1	TR:VR	51:3	45:1
chrX	121267978	r_80_1	A	A[chr3:88973182[	.	PASS	SVTYPE=BND;MATEID=r_80_0	TR:VR	51:3	45:1
chr7	61861604	r_118	G	<DEL>	.	Too_low_VAF	END=61922816;SVTYPE=DEL;SVLEN=-61212	TR:VR	65:3	44:0
chr9	13696027	r_126_0	G	G]chr9:25770248]	.	PASS	SVTYPE=BND;MATEID=r_126_1	TR:VR	64:7	49:0
chr9	25770248	r_126_1	A	A]chr9:13696027]	.	PASS	SVTYPE=BND;MATEID=r_126_0	TR:VR	64:7	49:0
chr1	210088210	i_18	T	<INS>	.	PASS	END=210088210;SVTYPE=INS;SVINSLEN=124;SVINSSEQ=TTTTTTTTTTTTTTTTTTTTTTTTATTTATTTATTTATTTATTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCT	TR:VR	25:15	22:0
chr13	82399683	d_126	A	<DEL>	.	PASS	END=82399932;SVTYPE=DEL;SVLEN=-249	TR:VR	29:5	23:0
chr6	162107129	r_112	G	<DEL>	.	PASS	END=162186878;SVTYPE=DEL;SVLEN=-79749;SVINSLEN=4;SVINSSEQ=ATCA	TR:VR	48:6	58:0
chr9	13696031	r_127_0	A	[chr9:25770247[A	.	PASS	SVTYPE=BND;MATEID=r_127_1	TR:VR	64:7	49:0
chr9	25770247	r_127_1	A	[chr9:13696031[A	.	PASS	SVTYPE=BND;MATEID=r_127_0	TR:VR	64:7	49:0
chr13	89028271	r_22	T	<DEL>	.	PASS	END=89138624;SVTYPE=DEL;SVLEN=-110353	TR:VR	70:5	49:0
chr6	162123356	d_670	G	<DEL>	.	PASS	END=162123504;SVTYPE=DEL;SVLEN=-148	TR:VR	19:3	24:0
chr12	129987536	d_112	T	<DEL>	.	PASS	END=129987614;SVTYPE=DEL;SVLEN=-78	TR:VR	32:13	24:0
chr6	162123774	r_113	G	<DEL>	.	PASS	END=162601678;SVTYPE=DEL;SVLEN=-477904	TR:VR	39:3	46:0
chr7	62531430	i_579	G	<INS>	.	PASS	END=62531430;SVTYPE=INS;SVINSLEN=155;SVINSSEQ=CATTCTCAGAAACTTCCTTGTGATGTGTGCATTGAACTCTCAGAGATGAACTTTCCTTTTGAGAGAGCAGTTTTGCAACAGTCTTTTTGCAGTTTCTGCAAGTGGACATTTGGAGCGATTTGAGATCTATGGTTGAAAAGGATATATCATATATC	TR:VR	29:11	20:0
chr19	8911476	d_368	A	<DEL>	.	PASS	END=8913337;SVTYPE=DEL;SVLEN=-1861;SVINSLEN=8;SVINSSEQ=TTAATTTT	TR:VR	37:6	40:1
chr3	96449937	d_586	G	<DEL>	.	PASS	END=96450090;SVTYPE=DEL;SVLEN=-153	TR:VR	16:4	21:0
chr6	162258356	r_114	T	<DEL>	.	PASS	END=162299864;SVTYPE=DEL;SVLEN=-41508	TR:VR	36:4	40:0
chr7	110912032	d_705	G	<DEL>	.	PASS	END=110915140;SVTYPE=DEL;SVLEN=-3108	TR:VR	39:5	29:0
chr4	106571041	r_84_0	T	[chr6:32621776[A	.	PASS	SVTYPE=BND;MATEID=r_84_1	TR:VR	50:3	60:1
chr6	32621776	r_84_1	A	[chr4:106571041[A	.	PASS	SVTYPE=BND;MATEID=r_84_0	TR:VR	50:3	60:1
chr6	162281116	r_115	A	<DEL>	.	PASS	END=162578523;SVTYPE=DEL;SVLEN=-297407	TR:VR	32:3	43:0
chr7	119913685	r_119_0	T	T]chr7:122846393]	.	PASS	SVTYPE=BND;MATEID=r_119_1	TR:VR	60:7	45:0
chr7	122846393	r_119_1	T	T]chr7:119913685]	.	PASS	SVTYPE=BND;MATEID=r_119_0	TR:VR	60:7	45:0
chr10	42167869	r_3_0	A	ATCGAGTGGAATCATCGAATGGACTCGA]chr14_KI270725v1_random:99254]	.	PASS	SVTYPE=BND;MATEID=r_3_1;SVINSLEN=27;SVINSSEQ=TCGAGTGGAATCATCGAATGGACTCGA	TR:VR	43:3	73:1
chr14_KI270725v1_random	99254	r_3_1	C	CTCGAGTCCATTCGATGATTCCACTCGA]chr10:42167869]	.	PASS	SVTYPE=BND;MATEID=r_3_0;SVINSLEN=27;SVINSSEQ=TCGAGTCCATTCGATGATTCCACTCGA	TR:VR	43:3	73:1
chr14	105956124	r_26_0	T	[chr14:106757487[GA	.	PASS	SVTYPE=BND;MATEID=r_26_1;SVINSLEN=1;SVINSSEQ=G	TR:VR	51:3	46:1
chr14	106757487	r_26_1	A	[chr14:105956124[CA	.	PASS	SVTYPE=BND;MATEID=r_26_0;SVINSLEN=1;SVINSSEQ=C	TR:VR	51:3	46:1
chr6	164280694	r_116	C	<DUP>	.	PASS	END=164299309;SVTYPE=DUP;SVLEN=18615;SVINSLEN=5;SVINSSEQ=AAAAA	TR:VR	61:9	47:0
chr7	120332112	r_120_0	T	[chr7:122056370[CC	.	PASS	SVTYPE=BND;MATEID=r_120_1;SVINSLEN=1;SVINSSEQ=C	TR:VR	58:8	36:0
chr7	122056370	r_120_1	C	[chr7:120332112[GC	.	PASS	SVTYPE=BND;MATEID=r_120_0;SVINSLEN=1;SVINSSEQ=G	TR:VR	58:8	36:0
chr20	34925637	d_500	A	<DEL>	.	PASS	END=34925685;SVTYPE=DEL;SVLEN=-48	TR:VR	33:5	20:0
chr4_GL000008v2_random	833	r_90_0	A	]chrUn_GL000216v2:159035]ATGCCCCCATACACAGATCCTATAAAATAGTCTCATCACCTGCACTACAGCCTGTGTGATAGAGGGAGACCCTGTTGAAAGAAAGGAGTGGAATGGAAGGGATTGGAATGGAATGGAATGGATTGGAATGCAGTGGAGTGGAATTGAGTGTAGTGGAGTGGAGTGCAGTGGAATGGAATGGA	.	Too_low_VAF	SVTYPE=BND;MATEID=r_90_1;SVINSLEN=181;SVINSSEQ=ATGCCCCCATACACAGATCCTATAAAATAGTCTCATCACCTGCACTACAGCCTGTGTGATAGAGGGAGACCCTGTTGAAAGAAAGGAGTGGAATGGAAGGGATTGGAATGGAATGGAATGGATTGGAATGCAGTGGAGTGGAATTGAGTGTAGTGGAGTGGAGTGCAGTGGAATGGAATGG	TR:VR	850:3	870:0
chrUn_GL000216v2	159035	r_90_1	A	ACCATTCCATTCCACTGCACTCCACTCCACTACACTCAATTCCACTCCACTGCATTCCAATCCATTCCATTCCATTCCAATCCCTTCCATTCCACTCCTTTCTTTCAACAGGGTCTCCCTCTATCACACAGGCTGTAGTGCAGGTGATGAGACTATTTTATAGGATCTGTGTATGGGGGCAT[chr4_GL000008v2_random:833[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_90_0;SVINSLEN=181;SVINSSEQ=CCATTCCATTCCACTGCACTCCACTCCACTACACTCAATTCCACTCCACTGCATTCCAATCCATTCCATTCCATTCCAATCCCTTCCATTCCACTCCTTTCTTTCAACAGGGTCTCCCTCTATCACACAGGCTGTAGTGCAGGTGATGAGACTATTTTATAGGATCTGTGTATGGGGGCAT	TR:VR	850:3	870:0
chr5	105403442	r_95	G	<DEL>	.	PASS	END=105438218;SVTYPE=DEL;SVLEN=-34776;SVINSLEN=1;SVINSSEQ=T	TR:VR	37:7	52:0
chr10	51019278	r_4	T	<DEL>	.	PASS	END=51517032;SVTYPE=DEL;SVLEN=-497754	TR:VR	46:3	56:0
chr18	15704211	i_244	C	<INS>	.	PASS	END=15704211;SVTYPE=INS;SVINSLEN=679;SVINSSEQ=CCTCTTTCTGCAGTATCTGGAAGTGGACATTTCGAGCGCTTTCAGGCCCATGGTGAACAAGGAAATATCTTCCCATGAAAACTAGACAGAAGCATTCGCAGAAACTTGTTTGTGATGTGTGTCCTCAACTCACGGAGTTGAACATTTCGTTTGACAGAGCAGTTTGGAAACACGATTTTTGTAGAATCTGCAAGTGGATATTTCGATGGCTTTGTGGATTTCGTTGGAAACGGGAGTATCTTCATAGACAACCTAGACAGTAACATGCTCAGAAACTGCTTTGTAATATCTGCATTCACGTCACAGAGTTGAACATTCCCTTTCATAGAGCAGGTTTGAAACACTCTTTTTGTCGTATCTGGAAGTGGACATTTGGAGCACATCACGCCTGTGGTGAAAAAGGAAATGTCTTCCCATGAAAACTAGACAGAAGCATTCTAAGAAACATTTTTGGGATATATGTACTCAACTAACAGAGTTGAACCTTTCTCTTTATAGATCAGTTTTGGAAAGCTCTTTATGTGGAATCTGCAGATGGATATTCGGATAGCTCTGAGGATTTCGTTGGAGACGGGAATACATAAAGAAAGTAGACAGCAGCATTCTCAGGAGATTCTTTGTGATGTTTGCGTTGAAGTCACAGAGTTGAACGTTCCCTTTCATAGAGCAGGTTTCAAAC	TR:VR	6:3	2:0
chr10	51362569	r_5	A	<DUP>	.	PASS	END=51376713;SVTYPE=DUP;SVLEN=14144	TR:VR	34:6	41:0
chr5	118538831	i_505	C	<INS>	.	PASS	END=118538831;SVTYPE=INS;SVINSLEN=397;SVINSSEQ=ATATATATATGTGTGTATATATATACTGTGTATATATAAGTGTGTGTATATATATACTGTGTATATATACTGTATATATATACTGTGTGTATATATATACTGTGTGTATATATATACTACTGTGTGTATATATACTGTGTATATATATACTGTGTGTATATATATATACTGTGTATATATATACTGTGTGTATATATATACTGTGTATATATATACTGTGTGTGTATATATACTGTGTGTGTATATATACTGTGTATATATACTGTGTGTATATATATATATGTGTATATATATATACTGTGTGTATATATACTGTGTGCAATATATACTGTGTATATATACTGTGTGTATATATATACTGTGTGTATATACACTGTGTATATATACTGTGTGTGTA	TR:VR	27:6	21:0
chr10	51363608	r_6	G	<DEL>	.	PASS	END=51428767;SVTYPE=DEL;SVLEN=-65159	TR:VR	34:5	46:0
chr10	51749795	r_7	T	<DEL>	.	PASS	END=51797791;SVTYPE=DEL;SVLEN=-47996	TR:VR	34:4	41:0
chr10	63740027	r_8	G	<DEL>	.	PASS	END=63791812;SVTYPE=DEL;SVLEN=-51785	TR:VR	31:5	52:0
chr15	24604792	r_28	C	<DEL>	.	PASS	END=24723141;SVTYPE=DEL;SVLEN=-118349	TR:VR	30:5	57:0
chr17	22159067	r_36_0	A	AATGGAATGGGATGGAAAGGAATGGAATCGAATGGAATGGATGGAATGGAATGGAATCGAATGGCATCCTAAAGAATCGAATGG[chrUn_KI270442v1:16458[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_36_1;SVINSLEN=83;SVINSSEQ=ATGGAATGGGATGGAAAGGAATGGAATCGAATGGAATGGATGGAATGGAATGGAATCGAATGGCATCCTAAAGAATCGAATGG	TR:VR	134:3	126:0
chrUn_KI270442v1	16458	r_36_1	A	]chr17:22159067]CCATTCGATTCTTTAGGATGCCATTCGATTCCATTCCATTCCATCCATTCCATTCGATTCCATTCCTTTCCATCCCATTCCATA	.	Too_low_VAF	SVTYPE=BND;MATEID=r_36_0;SVINSLEN=83;SVINSSEQ=CCATTCGATTCTTTAGGATGCCATTCGATTCCATTCCATTCCATCCATTCCATTCGATTCCATTCCTTTCCATCCCATTCCAT	TR:VR	134:3	126:0