##fileformat=VCFv4.3 ##fileDate=20230117 ##source=nanomonsv-0.5.0 ##reference=/projects/jfan_prj/jfan_prj/Nanopore_Testing/2021_nanopore_sv_testing/scratch/depth_testing/POG/COLO829/hg38_no_alt.fa ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##FILTER= ##FILTER= ##FILTER= ##FILTER= ##FILTER= ##FILTER= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##ALT= ##ALT= ##ALT= ##FORMAT= ##FORMAT= #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT TUMOR CONTROL chr1 104675820 r_32 A . PASS END=107615846;SVTYPE=DUP;SVLEN=2940026 TR:VR 81:9 46:0 chr1 98952924 i_15 C . PASS END=98952931;SVTYPE=INS;SVINSLEN=5337;SVINSSEQ=ACAGGGGCACACTGACACCTCACATGGCAGGAGTATTCCAACAGACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAGATGGGGAAAAAACAGAACAGAAAAGCTGGAAACTCTAAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGGAAGCCTATCAGACTAACAGCAGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAAGAAAATACTTTACAGACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTACCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCAAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTGAGTGACCTACAAAGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAATATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATACTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCACTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCACCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTACCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAGAACAGAGCCCTCAGAAATAATGCCACATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCTCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAAACACCAAAAGCAATGGCAACAAAAGCCAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAAAATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAGGTCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGGAAGTCAGGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATATTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAAATATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATATCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAATAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA TR:VR 22:3 16:0 chr11 12832460 r_140 G . PASS END=12838962;SVTYPE=DUP;SVLEN=6502 TR:VR 26:4 23:0 chr11 79172698 r_163 T . PASS END=79182594;SVTYPE=DUP;SVLEN=9896 TR:VR 44:5 20:0 chr15 100390939 r_290_0 T ]chr4:180957136]AAAAGACAAAATTGACAAATGGGAC . PASS SVTYPE=BND;MATEID=r_290_1;SVINSLEN=24;SVINSSEQ=AAAAGACAAAATTGACAAATGGGA TR:VR 37:4 34:0 chr4 180957136 r_290_1 C CTCCCATTTGTCAATTTTGTCTTTT[chr15:100390939[ . PASS SVTYPE=BND;MATEID=r_290_0;SVINSLEN=24;SVINSSEQ=TCCCATTTGTCAATTTTGTCTTTT TR:VR 37:4 34:0 chr17 16162684 r_327_0 A [chr20:25756130[AATATTTAAGTG . PASS SVTYPE=BND;MATEID=r_327_1;SVINSLEN=11;SVINSSEQ=AATATTTAAGT TR:VR 72:4 73:0 chr20 25756130 r_327_1 G [chr17:16162684[ACTTAAATATTG . PASS SVTYPE=BND;MATEID=r_327_0;SVINSLEN=11;SVINSSEQ=ACTTAAATATT TR:VR 72:4 73:0 chr2 211674338 d_684 A . PASS END=211675102;SVTYPE=DEL;SVLEN=-764 TR:VR 24:16 17:0 chr2 73947195 d_631 C . Too_small_size END=73947233;SVTYPE=DEL;SVLEN=-38 TR:VR 10:3 15:0 chr20 26300100 d_709 A . PASS END=26300713;SVTYPE=DEL;SVLEN=-613;SVINSLEN=106;SVINSSEQ=AGTGGCCATTGGGAACGCTTTGAGGCCTGTGATGGAAAAGGAAATATCTTCAGATGAAACTACACAGAATAATTCTCAGAATCTTCTTTGGATTTTTTTTCAAATC TR:VR 26:3 21:0 chr20 44893017 r_487 A . PASS END=46382037;SVTYPE=DUP;SVLEN=1489020 TR:VR 56:9 40:0 chr3 11602866 r_538_0 A A[chrX:9299930[ . PASS SVTYPE=BND;MATEID=r_538_1 TR:VR 65:12 41:0 chrX 9299930 r_538_1 T ]chr3:11602866]T . PASS SVTYPE=BND;MATEID=r_538_0 TR:VR 65:12 41:0 chr3 97478064 i_502 A . PASS END=97478064;SVTYPE=INS;SVINSLEN=100;SVINSSEQ=TTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCATTTGTTTCTCTTTATTTTTTTTTTTATTTTTTTTTTTTATTACT TR:VR 26:3 12:0 chr6 4152677 r_671 T . PASS END=4175615;SVTYPE=DEL;SVLEN=-22938 TR:VR 39:10 33:0 chr7 147970160 r_738 C . PASS END=147974836;SVTYPE=DUP;SVLEN=4676 TR:VR 30:5 14:0 chr7 70722496 r_723 T . PASS END=71001272;SVTYPE=DUP;SVLEN=278776 TR:VR 52:10 37:0 chr9 28204105 d_1212 C . PASS END=28204155;SVTYPE=DEL;SVLEN=-50 TR:VR 45:7 22:0 chrUn_GL000218v1 84430 r_815 A . PASS END=91474;SVTYPE=DUP;SVLEN=7044 TR:VR 73:5 51:0 chr1 104682913 r_33 A . PASS END=107588888;SVTYPE=DEL;SVLEN=-2905975 TR:VR 68:11 41:0 chr1 15322629 d_19 A . PASS END=15322750;SVTYPE=DEL;SVLEN=-121 TR:VR 20:8 12:0 chr1 9941428 r_8 C . PASS END=10120293;SVTYPE=DUP;SVLEN=178865 TR:VR 51:5 41:0 chr10 30011665 d_130 T . PASS END=30012383;SVTYPE=DEL;SVLEN=-718 TR:VR 62:27 17:0 chr10 61757943 r_115 C . PASS END=61771936;SVTYPE=DUP;SVLEN=13993 TR:VR 32:3 22:0 chr11 80789205 d_203 A . PASS END=80790637;SVTYPE=DEL;SVLEN=-1432 TR:VR 33:7 24:0 chr12 37261374 r_186_0 C C[chr8:125103707[ . PASS SVTYPE=BND;MATEID=r_186_1 TR:VR 115:6 42:0 chr8 125103707 r_186_1 T ]chr12:37261374]T . PASS SVTYPE=BND;MATEID=r_186_0 TR:VR 115:6 42:0 chr13 20554056 d_255 T . Too_small_size END=20554096;SVTYPE=DEL;SVLEN=-40 TR:VR 20:9 19:0 chr14 20703212 d_291 C . PASS END=20703286;SVTYPE=DEL;SVLEN=-74 TR:VR 28:5 14:0 chr15 100390955 r_291_0 T T[chr4:180955681[ . PASS SVTYPE=BND;MATEID=r_291_1 TR:VR 38:4 34:0 chr4 180955681 r_291_1 A ]chr15:100390955]A . PASS SVTYPE=BND;MATEID=r_291_0 TR:VR 38:4 34:0 chr16 21124740 r_297_0 C [chr8:94654769[C . PASS SVTYPE=BND;MATEID=r_297_1 TR:VR 73:7 34:0 chr8 94654769 r_297_1 C [chr16:21124740[C . PASS SVTYPE=BND;MATEID=r_297_0 TR:VR 73:7 34:0 chr18 38935102 r_373_0 T T]chr9:10330596] . PASS SVTYPE=BND;MATEID=r_373_1 TR:VR 77:17 36:0 chr9 10330596 r_373_1 C C]chr18:38935102] . PASS SVTYPE=BND;MATEID=r_373_0 TR:VR 77:17 36:0 chr2 123786579 d_661 C . PASS END=123788599;SVTYPE=DEL;SVLEN=-2020 TR:VR 31:7 16:0 chr2 213124226 d_685 A . Too_small_size END=213124252;SVTYPE=DEL;SVLEN=-26 TR:VR 31:8 15:0 chr2 74157314 d_632 T . PASS END=74157658;SVTYPE=DEL;SVLEN=-344 TR:VR 24:3 19:0 chr20 45869820 d_756 G . PASS END=45870119;SVTYPE=DEL;SVLEN=-299 TR:VR 32:5 21:0 chr3 11645 d_839 C . PASS END=11715;SVTYPE=DEL;SVLEN=-70;SVINSLEN=12;SVINSSEQ=CGCGCCGGCGCA TR:VR 79:8 51:1 chr3 9879593 r_535 C . PASS END=9881791;SVTYPE=DUP;SVLEN=2198;SVINSLEN=5;SVINSSEQ=ATATG TR:VR 48:14 20:0 chr4 96452035 r_629_0 T T]chr4:96606590] . PASS SVTYPE=BND;MATEID=r_629_1 TR:VR 87:5 39:0 chr4 96606590 r_629_1 G G]chr4:96452035] . PASS SVTYPE=BND;MATEID=r_629_0 TR:VR 87:5 39:0 chr5 43244335 d_997 C . Too_small_size END=43244377;SVTYPE=DEL;SVLEN=-42 TR:VR 32:4 22:0 chr7 148847773 r_739 T . PASS END=148857890;SVTYPE=DEL;SVLEN=-10117 TR:VR 34:20 23:0 chr7 70757213 r_724 C . PASS END=70762803;SVTYPE=DUP;SVLEN=5590 TR:VR 31:9 23:0 chr8 89243353 r_756_0 A [chr8:90373893[T . PASS SVTYPE=BND;MATEID=r_756_1 TR:VR 98:6 37:0 chr8 90373893 r_756_1 T [chr8:89243353[T . PASS SVTYPE=BND;MATEID=r_756_0 TR:VR 98:6 37:0 chr9 2951646 r_783 A . PASS END=2965011;SVTYPE=DUP;SVLEN=13365 TR:VR 95:9 19:0 chrX 56271596 r_825 C . Too_low_VAF END=156030296;SVTYPE=DUP;SVLEN=99758700;SVINSLEN=1;SVINSSEQ=G TR:VR 188:5 202:0 chr1 105057220 r_34_0 T [chr1:105061905[A . PASS SVTYPE=BND;MATEID=r_34_1 TR:VR 37:3 20:0 chr1 105061905 r_34_1 A [chr1:105057220[A . PASS SVTYPE=BND;MATEID=r_34_0 TR:VR 37:3 20:0 chr1 155414659 r_48_0 T [chrX:20307039[C . PASS SVTYPE=BND;MATEID=r_48_1 TR:VR 39:3 20:0 chrX 20307039 r_48_1 C [chr1:155414659[C . PASS SVTYPE=BND;MATEID=r_48_0 TR:VR 39:3 20:0 chr1 99627928 r_31 T . PASS END=99643042;SVTYPE=DUP;SVLEN=15114 TR:VR 42:4 22:0 chr10 30112546 r_97 C . PASS END=30117507;SVTYPE=DUP;SVLEN=4961 TR:VR 59:10 27:0 chr11 84780398 d_204 T . PASS END=84780447;SVTYPE=DEL;SVLEN=-49 TR:VR 36:4 16:0 chr12 37332655 d_229 C . PASS END=37332716;SVTYPE=DEL;SVLEN=-61 TR:VR 42:8 19:0 chr13 26538972 d_256 G . PASS END=26539034;SVTYPE=DEL;SVLEN=-62;SVINSLEN=5;SVINSSEQ=AATTC TR:VR 21:11 22:0 chr14 21426627 r_235 T . PASS END=94017921;SVTYPE=DEL;SVLEN=-72591294 TR:VR 73:9 43:0 chr16 23711593 r_298_0 A [chr6:161477787[AATATATTGAGGCTGAGGCAGT . PASS SVTYPE=BND;MATEID=r_298_1;SVINSLEN=21;SVINSSEQ=AATATATTGAGGCTGAGGCAG TR:VR 37:5 43:0 chr6 161477787 r_298_1 T [chr16:23711593[CTGCCTCAGCCTCAATATATTT . PASS SVTYPE=BND;MATEID=r_298_0;SVINSLEN=21;SVINSSEQ=CTGCCTCAGCCTCAATATATT TR:VR 37:5 43:0 chr18 39676780 i_297 T . PASS END=39676780;SVTYPE=INS;SVINSLEN=106;SVINSSEQ=TAGCTCTACATTGTAGATCTATTCCATAGATCCTTCTGTTTTTTGAATTGTATATTATCTTTTAAATTGAGGTATAATTTACATCCAATAAAATACAGTGTACAGT TR:VR 30:9 18:0 chr2 124076448 d_662 T . Too_small_size END=124076493;SVTYPE=DEL;SVLEN=-45 TR:VR 31:11 19:0 chr2 74283715 d_633 C . Too_small_size END=74283759;SVTYPE=DEL;SVLEN=-44 TR:VR 23:3 7:0 chr21 38876390 d_786 T . Too_small_size END=38876425;SVTYPE=DEL;SVLEN=-35 TR:VR 29:9 25:0 chr5 44586282 d_998 A . PASS END=44586354;SVTYPE=DEL;SVLEN=-72 TR:VR 23:9 24:0 chr6 154087101 i_602 T . PASS END=154087101;SVTYPE=INS;SVINSLEN=1179;SVINSSEQ=AAGAAAGTGAAACTCCCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTCTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACCCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAATAAAGAGAAACAAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA TR:VR 25:6 24:0 chr7 73413653 r_725 A . PASS END=73421368;SVTYPE=DUP;SVLEN=7715 TR:VR 39:4 22:0 chr8 143534465 r_778 C . Too_low_VAF END=143862178;SVTYPE=DUP;SVLEN=327713 TR:VR 101:3 31:0 chr9 2990813 r_784 A . PASS END=2993901;SVTYPE=DUP;SVLEN=3088 TR:VR 64:9 15:0 chrX 63387258 d_1363 G . PASS END=63387982;SVTYPE=DEL;SVLEN=-724 TR:VR 28:6 12:0 chr1 105526862 r_35 T . PASS END=105851177;SVTYPE=DUP;SVLEN=324315 TR:VR 71:14 43:0 chr1 158244340 d_85 T . Too_small_size END=158244377;SVTYPE=DEL;SVLEN=-37 TR:VR 18:5 19:0 chr10 101864815 d_172 C . PASS END=101864869;SVTYPE=DEL;SVLEN=-54 TR:VR 30:14 19:0 chr10 30208213 r_98 A . PASS END=30215459;SVTYPE=DUP;SVLEN=7246 TR:VR 53:6 19:0 chr10 636611 d_111 G . PASS END=648581;SVTYPE=DEL;SVLEN=-11970;SVINSLEN=148;SVINSSEQ=TGGGTGAGAACAGAGGGAAACTGAGTCCACGTCCACATTGGATGGTGGGAGAGAACATAGGGAAACTGAGTCCACGTCCACATTGGACGGTAGGAGAGAACAGAGCGAAACTGAGTCCACGTCCACAGTGGACGGTGGGCGAGAACAG TR:VR 72:13 14:0 chr13 26913974 r_218_0 A ]chrX:74992493]A . PASS SVTYPE=BND;MATEID=r_218_1 TR:VR 60:4 35:1 chrX 74992493 r_218_1 A A[chr13:26913974[ . PASS SVTYPE=BND;MATEID=r_218_0 TR:VR 60:4 35:1 chr15 101210374 r_292_0 A [chr15:101220704[A . PASS SVTYPE=BND;MATEID=r_292_1 TR:VR 32:6 16:0 chr15 101220704 r_292_1 A [chr15:101210374[A . PASS SVTYPE=BND;MATEID=r_292_0 TR:VR 32:6 16:0 chr17 21399778 r_329_0 T ]chr20:30285566]G . PASS SVTYPE=BND;MATEID=r_329_1 TR:VR 49:3 33:0 chr20 30285566 r_329_1 G G[chr17:21399778[ . PASS SVTYPE=BND;MATEID=r_329_0 TR:VR 49:3 33:0 chr19 30451373 d_592 T . PASS END=30451485;SVTYPE=DEL;SVLEN=-112 TR:VR 30:5 12:0 chr2 131958309 d_663 T . Too_small_size END=131958344;SVTYPE=DEL;SVLEN=-35 TR:VR 26:7 12:0 chr2 74458459 r_424_0 G [chr2:112282610[C . PASS SVTYPE=BND;MATEID=r_424_1 TR:VR 60:4 45:0 chr2 112282610 r_424_1 C [chr2:74458459[C . PASS SVTYPE=BND;MATEID=r_424_0 TR:VR 60:4 45:0 chr20 46484386 d_757 T . Too_small_size END=46484424;SVTYPE=DEL;SVLEN=-38 TR:VR 36:9 19:0 chr21 38905637 r_505_0 G [chrUn_GL000219v1:174644[T . Too_low_VAF SVTYPE=BND;MATEID=r_505_1 TR:VR 90:3 58:0 chrUn_GL000219v1 174644 r_505_1 T [chr21:38905637[T . Too_low_VAF SVTYPE=BND;MATEID=r_505_0 TR:VR 90:3 58:0 chr22 19360685 r_513_0 A [chr22:19360898[G . PASS SVTYPE=BND;MATEID=r_513_1 TR:VR 39:9 18:0 chr22 19360898 r_513_1 G [chr22:19360685[G . PASS SVTYPE=BND;MATEID=r_513_0 TR:VR 39:9 18:0 chr3 195919713 r_585 T . PASS END=195928723;SVTYPE=DUP;SVLEN=9010 TR:VR 45:3 15:0 chr4 98797215 r_631 C . PASS END=98801545;SVTYPE=DUP;SVLEN=4330 TR:VR 45:4 20:0 chr7 74088965 d_1107 T . Too_small_size END=74089003;SVTYPE=DEL;SVLEN=-38 TR:VR 23:4 19:0 chr8 90277943 d_1154 C . PASS END=90280769;SVTYPE=DEL;SVLEN=-2826;SVINSLEN=5;SVINSSEQ=GCTGT TR:VR 57:3 16:0 chrX 64804337 d_1364 A . PASS END=64804414;SVTYPE=DEL;SVLEN=-77 TR:VR 26:7 24:0 chr1 10643748 r_9 A . PASS END=10649406;SVTYPE=DUP;SVLEN=5658 TR:VR 33:6 18:0 chr1 158873376 d_86 T . PASS END=158873424;SVTYPE=DEL;SVLEN=-48 TR:VR 35:6 15:0 chr1 25163112 d_22 A . Too_small_size END=25163150;SVTYPE=DEL;SVLEN=-38 TR:VR 27:15 13:0 chr10 30265637 r_99 G . PASS END=30267438;SVTYPE=DUP;SVLEN=1801 TR:VR 58:3 12:0 chr11 8779410 d_192 A . PASS END=8779460;SVTYPE=DEL;SVLEN=-50 TR:VR 21:7 13:0 chr13 26913988 r_219_0 C C[chrX:74991600[ . PASS SVTYPE=BND;MATEID=r_219_1 TR:VR 59:4 35:1 chrX 74991600 r_219_1 G ]chr13:26913988]G . PASS SVTYPE=BND;MATEID=r_219_0 TR:VR 59:4 35:1 chr14 22480260 r_236_0 G ]chr3:19083765]T . PASS SVTYPE=BND;MATEID=r_236_1 TR:VR 48:6 29:0 chr3 19083765 r_236_1 T T[chr14:22480260[ . PASS SVTYPE=BND;MATEID=r_236_0 TR:VR 48:6 29:0 chr16 2551529 d_411 T . PASS END=2551958;SVTYPE=DEL;SVLEN=-429 TR:VR 21:7 17:0 chr2 133289895 r_441 A . PASS END=133651020;SVTYPE=DUP;SVLEN=361125 TR:VR 64:13 37:0 chr2 74458667 r_425 A . PASS END=74459638;SVTYPE=DEL;SVLEN=-971 TR:VR 30:3 21:0 chr20 46603990 r_489 C . PASS END=46613241;SVTYPE=DUP;SVLEN=9251;SVINSLEN=4;SVINSSEQ=CAAA TR:VR 50:7 24:0 chr21 39874799 r_506 C . PASS END=39883194;SVTYPE=DUP;SVLEN=8395 TR:VR 49:11 15:0 chr22 19361161 r_514_0 T T]chr22:19366285] . PASS SVTYPE=BND;MATEID=r_514_1 TR:VR 49:3 20:0 chr22 19366285 r_514_1 C C]chr22:19361161] . PASS SVTYPE=BND;MATEID=r_514_0 TR:VR 49:3 20:0 chr3 120031537 r_567 G . PASS END=120094918;SVTYPE=DEL;SVLEN=-63381 TR:VR 49:10 34:0 chr4 10577218 r_593 T . PASS END=12855314;SVTYPE=DEL;SVLEN=-2278096 TR:VR 38:8 29:0 chr4 48906950 d_931 T . Too_small_size END=48906994;SVTYPE=DEL;SVLEN=-44 TR:VR 64:8 23:0 chr4 99042683 r_632_0 A A]chr4:112547776] . PASS SVTYPE=BND;MATEID=r_632_1 TR:VR 64:19 40:0 chr4 112547776 r_632_1 A A]chr4:99042683] . PASS SVTYPE=BND;MATEID=r_632_0 TR:VR 64:19 40:0 chr6 156917110 d_1076 A . Too_small_size END=156917153;SVTYPE=DEL;SVLEN=-43 TR:VR 29:17 15:0 chr6 44430969 r_686 C . PASS END=44445154;SVTYPE=DEL;SVLEN=-14185 TR:VR 18:4 24:0 chr7 77194925 d_1108 G . Too_small_size END=77194962;SVTYPE=DEL;SVLEN=-37 TR:VR 35:24 19:0 chr8 91085773 d_1155 G . PASS END=91096164;SVTYPE=DEL;SVLEN=-10391 TR:VR 60:4 20:0 chrX 65155342 d_1365 T . Too_small_size END=65155378;SVTYPE=DEL;SVLEN=-36 TR:VR 26:5 25:0 chr10 102091224 d_173 T . PASS END=102091462;SVTYPE=DEL;SVLEN=-238 TR:VR 27:10 20:0 chr10 31669989 r_100_0 T [chr7:154507463[GGA . Too_low_VAF SVTYPE=BND;MATEID=r_100_1;SVINSLEN=2;SVINSSEQ=GG TR:VR 81:3 43:0 chr7 154507463 r_100_1 A [chr10:31669989[CCA . Too_low_VAF SVTYPE=BND;MATEID=r_100_0;SVINSLEN=2;SVINSSEQ=CC TR:VR 81:3 43:0 chr10 6584386 r_77 C . Too_low_VAF END=6593923;SVTYPE=DUP;SVLEN=9537 TR:VR 92:4 23:0 chr14 22958533 d_293 T . PASS END=22958599;SVTYPE=INS;SVINSLEN=238;SVINSSEQ=GGTCTCGCACTCCTGACCTCAAGCAATCTGCCCGGCCAAATATCTTTCACCTGTCTTAATCTTTTTTTTTTTTTTTTTCCAGACGGAGTCTTGCTCTGTTGCCAGGCTGGAGTGCAGTGGCGCGATCTCTGCAACCTTCACCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCGGGCGCCACCACGCCCAGGTAATTTTTTGTATTTTTAGTA TR:VR 27:5 15:0 chr19 30663526 r_389 T . PASS END=30667240;SVTYPE=DUP;SVLEN=3714 TR:VR 32:4 19:0 chr2 133373244 r_442 A . PASS END=133383435;SVTYPE=DUP;SVLEN=10191 TR:VR 44:6 15:0 chr2 218316522 d_686 T . PASS END=218316576;SVTYPE=DEL;SVLEN=-54;SVINSLEN=9;SVINSSEQ=TTTTTTTTT TR:VR 26:17 11:0 chr2 76188648 d_634 A . Too_small_size END=76188683;SVTYPE=DEL;SVLEN=-35 TR:VR 29:6 20:0 chr20 48113479 r_490 T . PASS END=48117268;SVTYPE=DUP;SVLEN=3789 TR:VR 39:4 19:0 chr21 40650466 r_507 A . PASS END=40728339;SVTYPE=DUP;SVLEN=77873;SVINSLEN=19;SVINSSEQ=GCTCAACTATCTACTTTTC TR:VR 41:5 47:0 chr22 19874119 r_515_0 G GCT]chr22:19886916] . PASS SVTYPE=BND;MATEID=r_515_1;SVINSLEN=2;SVINSSEQ=CT TR:VR 44:8 22:0 chr22 19886916 r_515_1 G GAG]chr22:19874119] . PASS SVTYPE=BND;MATEID=r_515_0;SVINSLEN=2;SVINSSEQ=AG TR:VR 44:8 22:0 chr4 106399772 d_959 T . PASS END=106399821;SVTYPE=DEL;SVLEN=-49 TR:VR 28:9 11:0 chr4 99256940 r_633 A . PASS END=99301969;SVTYPE=DEL;SVLEN=-45029 TR:VR 74:15 42:0 chr7 152998601 d_1124 C . PASS END=152998654;SVTYPE=DEL;SVLEN=-53 TR:VR 31:10 15:0 chr7 79980135 r_726_0 T TT]chrX:130381022] . PASS SVTYPE=BND;MATEID=r_726_1;SVINSLEN=1;SVINSSEQ=T TR:VR 70:9 43:0 chrX 130381022 r_726_1 T TA]chr7:79980135] . PASS SVTYPE=BND;MATEID=r_726_0;SVINSLEN=1;SVINSSEQ=A TR:VR 70:9 43:0 chr9 32280112 r_792 G . PASS END=32284952;SVTYPE=DUP;SVLEN=4840 TR:VR 49:3 25:0 chrX 115710821 d_1377 G . PASS END=115710895;SVTYPE=DEL;SVLEN=-74 TR:VR 26:10 17:0 chrX 68034617 r_826 C . PASS END=68044151;SVTYPE=DUP;SVLEN=9534 TR:VR 27:3 17:0 chr1 109520378 r_37 T . PASS END=109522093;SVTYPE=DUP;SVLEN=1715 TR:VR 27:3 13:0 chr1 1623562 d_4 T . PASS END=1623718;SVTYPE=DEL;SVLEN=-156 TR:VR 26:18 13:0 chr10 67798362 d_165 T . Too_small_size END=67798405;SVTYPE=DEL;SVLEN=-43 TR:VR 17:9 18:0 chr14 23433573 d_294 G . PASS END=23433620;SVTYPE=DEL;SVLEN=-47 TR:VR 25:5 18:0 chr2 134608813 i_362 C . PASS END=134608813;SVTYPE=INS;SVINSLEN=98;SVINSSEQ=CCGAGAACTGTGCTGGTGAAAAGGAGGACAGACCCCGAGAACTGTGCTGGTGAAAAGGAGGACAGACCCTGAGAACTGTGCTGGTGAAAAGGACAGAC TR:VR 29:3 18:0 chr2 77070453 d_635 C . Too_small_size END=77070492;SVTYPE=DEL;SVLEN=-39 TR:VR 27:6 12:0 chr21 41464810 r_508 C . PASS END=41477669;SVTYPE=DUP;SVLEN=12859 TR:VR 34:7 24:0 chr4 114443414 d_960 T . Too_small_size END=114443454;SVTYPE=DEL;SVLEN=-40 TR:VR 18:8 20:0 chr6 4876693 r_672_0 A [chr6:17146901[A . PASS SVTYPE=BND;MATEID=r_672_1 TR:VR 59:8 47:0 chr6 17146901 r_672_1 A [chr6:4876693[A . PASS SVTYPE=BND;MATEID=r_672_0 TR:VR 59:8 47:0 chr7 153173721 d_1125 A . PASS END=153173905;SVTYPE=DEL;SVLEN=-184 TR:VR 26:17 15:0 chr7 8357009 d_1086 A . Too_small_size END=8357046;SVTYPE=DEL;SVLEN=-37 TR:VR 14:5 11:0 chr9 33493374 d_1213 T . PASS END=33493428;SVTYPE=DEL;SVLEN=-54 TR:VR 46:7 14:0 chr1 163574845 d_87 A . PASS END=163575253;SVTYPE=DEL;SVLEN=-408 TR:VR 26:4 19:0 chr10 1046540 d_115 A . PASS END=1047042;SVTYPE=DEL;SVLEN=-502;SVINSLEN=77;SVINSSEQ=CAGCCCAGCTGCTCCACTGTCTACACCACACACGCCAAGCTGCTCCACTGTCTACACCACCGCCCCAGCTGCTCACT TR:VR 49:3 17:0 chr10 32270448 d_131 T . PASS END=32270588;SVTYPE=DEL;SVLEN=-140 TR:VR 44:16 16:0 chr11 9334942 r_138_0 G [chr5:143669365[C . PASS SVTYPE=BND;MATEID=r_138_1 TR:VR 54:7 35:0 chr5 143669365 r_138_1 C [chr11:9334942[C . PASS SVTYPE=BND;MATEID=r_138_0 TR:VR 54:7 35:0 chr14 28764738 d_295 C . PASS END=28764880;SVTYPE=DEL;SVLEN=-142 TR:VR 28:5 16:0 chr18 43017341 d_560 T . Too_small_size END=43017385;SVTYPE=DEL;SVLEN=-44 TR:VR 27:5 18:0 chr19 32727160 d_593 A . Too_small_size END=32727201;SVTYPE=DEL;SVLEN=-41 TR:VR 24:7 25:0 chr2 77851708 r_426_0 A [chr2:77854241[T . PASS SVTYPE=BND;MATEID=r_426_1 TR:VR 32:4 17:0 chr2 77854241 r_426_1 T [chr2:77851708[T . PASS SVTYPE=BND;MATEID=r_426_0 TR:VR 32:4 17:0 chr4 1182884 d_912 C . PASS END=1183614;SVTYPE=DEL;SVLEN=-730 TR:VR 29:20 15:0 chr7 154490797 r_740_0 T TAAAA]chr7:154513289] . PASS SVTYPE=BND;MATEID=r_740_1;SVINSLEN=4;SVINSSEQ=AAAA TR:VR 50:5 34:0 chr7 154513289 r_740_1 A ATTTT]chr7:154490797] . PASS SVTYPE=BND;MATEID=r_740_0;SVINSLEN=4;SVINSSEQ=TTTT TR:VR 50:5 34:0 chr9 33664210 d_1214 T . PASS END=33674323;SVTYPE=DEL;SVLEN=-10113;SVINSLEN=1;SVINSSEQ=G TR:VR 58:3 27:0 chrUn_KI270442v1 149802 d_1326 T . Too_low_VAF END=149913;SVTYPE=INS;SVINSLEN=111;SVINSSEQ=TTTCAGATTGCTTCTCTCCAGATTTTATGCGAAGATATTTCCTTTTCTATGGTAGGCCGCAAAGCACTCCAAATGTCCACTTGCAGATACTACAAAAAGAGTGTTTCCAAA TR:VR 85:4 57:0 chrX 121673547 r_837 G . PASS END=121973633;SVTYPE=DEL;SVLEN=-300086 TR:VR 17:6 29:0 chrX 70365963 r_827 T . PASS END=70399879;SVTYPE=DEL;SVLEN=-33916 TR:VR 50:6 31:0 chr1 165018300 d_88 T . Too_small_size END=165018342;SVTYPE=DEL;SVLEN=-42;SVINSLEN=3;SVINSSEQ=AAA TR:VR 33:6 26:0 chr11 9356946 r_139_0 C C]chr5:143673971] . PASS SVTYPE=BND;MATEID=r_139_1 TR:VR 52:5 33:0 chr5 143673971 r_139_1 A A]chr11:9356946] . PASS SVTYPE=BND;MATEID=r_139_0 TR:VR 52:5 33:0 chr16 336166 d_409 C . Too_small_size END=336210;SVTYPE=DEL;SVLEN=-44 TR:VR 13:5 18:0 chr18 43941203 d_561 C . Too_small_size END=43941240;SVTYPE=DEL;SVLEN=-37 TR:VR 28:17 15:0 chr2 221572939 d_687 G . PASS END=221574468;SVTYPE=DEL;SVLEN=-1529 TR:VR 21:5 14:0 chr20 50261841 r_492 A . PASS END=50415884;SVTYPE=DUP;SVLEN=154043 TR:VR 76:7 43:0 chr22 21668578 i_477 G . Too_small_size END=21668578;SVTYPE=INS;SVINSLEN=44;SVINSSEQ=ACATTGCACAACTGCACTCCAGCCTGGGCAGCGAGCAAGACTCA TR:VR 27:9 19:0 chr3 125466599 r_570 C . PASS END=125471760;SVTYPE=DUP;SVLEN=5161 TR:VR 36:4 19:0 chr6 160926355 r_699 A . PASS END=160928968;SVTYPE=DUP;SVLEN=2613 TR:VR 31:3 18:0 chr8 100155222 d_1158 A . PASS END=100155654;SVTYPE=DEL;SVLEN=-432;SVINSLEN=3;SVINSSEQ=TTT TR:VR 42:3 14:0 chr8 144115697 d_1181 G . PASS END=144116125;SVTYPE=DEL;SVLEN=-428 TR:VR 35:5 10:0 chr8 97896310 d_1156 T . Too_small_size END=97896345;SVTYPE=DEL;SVLEN=-35 TR:VR 50:5 17:0 chr9 34039548 d_1215 T . PASS END=34039674;SVTYPE=DEL;SVLEN=-126 TR:VR 40:17 22:0 chrX 70500740 r_828 T . PASS END=70516039;SVTYPE=DEL;SVLEN=-15299 TR:VR 34:12 27:0 chr1 2662915 d_10 C . Too_low_VAF END=2663216;SVTYPE=DEL;SVLEN=-301;SVINSLEN=62;SVINSSEQ=CACATCCCCAGGGTGAGCATCTGACAGGCTGGAAGAGCACCCACACCCCCAGGCGAGCATCT TR:VR 117:5 64:1 chr10 10804838 r_80 G . PASS END=10808018;SVTYPE=DUP;SVLEN=3180 TR:VR 62:9 13:0 chr10 33929061 r_101_0 C ]chr7:101738210]A . PASS SVTYPE=BND;MATEID=r_101_1 TR:VR 71:7 32:0 chr7 101738210 r_101_1 A A[chr10:33929061[ . PASS SVTYPE=BND;MATEID=r_101_0 TR:VR 71:7 32:0 chr11 93640902 d_205 C . PASS END=93643337;SVTYPE=DEL;SVLEN=-2435 TR:VR 24:5 15:0 chr13 36209275 d_258 C . PASS END=36209602;SVTYPE=DEL;SVLEN=-327 TR:VR 28:5 16:0 chr14 33261691 r_237 T . PASS END=33265764;SVTYPE=DUP;SVLEN=4073 TR:VR 32:4 15:0 chr16 33946108 r_299_0 A [chr16:33948134[A . PASS SVTYPE=BND;MATEID=r_299_1 TR:VR 31:12 14:0 chr16 33948134 r_299_1 A [chr16:33946108[A . PASS SVTYPE=BND;MATEID=r_299_0 TR:VR 31:12 14:0 chr20 53840330 d_758 C . PASS END=53840389;SVTYPE=DEL;SVLEN=-59 TR:VR 35:3 13:0 chr22 21668610 i_478 C . Too_small_size END=21668610;SVTYPE=INS;SVINSLEN=46;SVINSSEQ=AGAGCAAGACTCACATTGCACAACTGCACTCCAGCCTGGGCAACAG TR:VR 27:9 19:0 chr3 127828157 d_874 G . PASS END=127828281;SVTYPE=DEL;SVLEN=-124 TR:VR 24:4 22:0 chr6 161983924 r_700_0 A A[chr9:6290480[ . Too_low_VAF SVTYPE=BND;MATEID=r_700_1 TR:VR 73:3 25:0 chr9 6290480 r_700_1 A ]chr6:161983924]A . Too_low_VAF SVTYPE=BND;MATEID=r_700_0 TR:VR 73:3 25:0 chr6 55900303 r_687 A . PASS END=55921370;SVTYPE=DEL;SVLEN=-21067;SVINSLEN=2;SVINSSEQ=TA TR:VR 27:3 30:0 chr8 100381855 d_1159 A . PASS END=100382288;SVTYPE=DEL;SVLEN=-433 TR:VR 42:3 21:0 chr8 98391830 d_1157 T . PASS END=98392470;SVTYPE=DEL;SVLEN=-640;SVINSLEN=8;SVINSSEQ=TTCCCACC TR:VR 40:15 16:0 chr9 35064775 d_1216 G . PASS END=35064870;SVTYPE=DEL;SVLEN=-95 TR:VR 39:4 14:0 chrUn_KI270442v1 234631 r_817 A . PASS END=243981;SVTYPE=DUP;SVLEN=9350 TR:VR 112:7 64:0 chrX 125040611 r_839_0 T [chrX:125092049[T . PASS SVTYPE=BND;MATEID=r_839_1 TR:VR 72:10 36:0 chrX 125092049 r_839_1 T [chrX:125040611[T . PASS SVTYPE=BND;MATEID=r_839_0 TR:VR 72:10 36:0 chr1 112993952 d_42 G . Too_small_size END=112993995;SVTYPE=DEL;SVLEN=-43 TR:VR 28:10 22:0 chr1 166830107 r_49_0 A [chr21:45965383[G . Too_low_VAF SVTYPE=BND;MATEID=r_49_1 TR:VR 74:3 34:0 chr21 45965383 r_49_1 G [chr1:166830107[G . Too_low_VAF SVTYPE=BND;MATEID=r_49_0 TR:VR 74:3 34:0 chr10 109852901 r_126 G . PASS END=111198019;SVTYPE=DEL;SVLEN=-1345118 TR:VR 38:7 35:0 chr10 33933268 r_102_0 C C[chr7:101734324[ . PASS SVTYPE=BND;MATEID=r_102_1 TR:VR 69:5 33:0 chr7 101734324 r_102_1 A ]chr10:33933268]A . PASS SVTYPE=BND;MATEID=r_102_0 TR:VR 69:5 33:0 chr11 94115360 d_206 A . Too_small_size END=94115397;SVTYPE=DEL;SVLEN=-37 TR:VR 25:9 28:0 chr12 37486868 r_188 T . PASS END=42403520;SVTYPE=DUP;SVLEN=4916652 TR:VR 126:24 35:0 chr13 36449253 i_157 T . Too_small_size END=36449266;SVTYPE=DEL;SVLEN=-13;SVINSLEN=1;SVINSSEQ=A TR:VR 31:12 27:0 chr14 36286405 r_238_0 A AGTTCCTGCCAGTTCTTTCTTC]chr14:36286758] . PASS SVTYPE=BND;MATEID=r_238_1;SVINSLEN=21;SVINSSEQ=GTTCCTGCCAGTTCTTTCTTC TR:VR 24:8 18:0 chr14 36286758 r_238_1 G GGAAGAAAGAACTGGCAGGAAC]chr14:36286405] . PASS SVTYPE=BND;MATEID=r_238_0;SVINSLEN=21;SVINSSEQ=GAAGAAAGAACTGGCAGGAAC TR:VR 24:8 18:0 chr16 33952565 r_300_0 T [chr2:99280104[TTTTTTTTTA . Too_low_VAF SVTYPE=BND;MATEID=r_300_1;SVINSLEN=9;SVINSSEQ=TTTTTTTTT TR:VR 73:3 41:0 chr2 99280104 r_300_1 A [chr16:33952565[AAAAAAAAAA . Too_low_VAF SVTYPE=BND;MATEID=r_300_0;SVINSLEN=9;SVINSSEQ=AAAAAAAAA TR:VR 73:3 41:0 chr17_GL000205v2_random 63172 d_528 C . Too_small_size END=63212;SVTYPE=DEL;SVLEN=-40;SVINSLEN=3;SVINSSEQ=AAG TR:VR 93:7 90:0 chr2 229132963 d_688 C . PASS END=229133022;SVTYPE=DEL;SVLEN=-59 TR:VR 30:7 15:0 chr20 5400804 d_700 G . PASS END=5400864;SVTYPE=DEL;SVLEN=-60 TR:VR 34:13 17:0 chr22 21731703 r_516_0 A ]chr7:46748532]A . Too_low_VAF SVTYPE=BND;MATEID=r_516_1 TR:VR 71:3 14:0 chr7 46748532 r_516_1 A A[chr22:21731703[ . Too_low_VAF SVTYPE=BND;MATEID=r_516_0 TR:VR 71:3 14:0 chr3 127911287 d_875 G . Too_small_size END=127911329;SVTYPE=DEL;SVLEN=-42 TR:VR 31:4 20:0 chr7 155795822 r_741 T . PASS END=155817200;SVTYPE=DUP;SVLEN=21378 TR:VR 43:3 31:0 chr8 100522301 r_761 A . PASS END=100528798;SVTYPE=DUP;SVLEN=6497 TR:VR 54:4 26:0 chr8 98586853 r_758 C . PASS END=98990815;SVTYPE=DUP;SVLEN=403962 TR:VR 97:5 43:0 chr9 35065276 r_793_0 C C]chr9:35072936] . PASS SVTYPE=BND;MATEID=r_793_1 TR:VR 54:3 17:0 chr9 35072936 r_793_1 T T]chr9:35065276] . PASS SVTYPE=BND;MATEID=r_793_0 TR:VR 54:3 17:0 chrX 126509069 d_1378 G . PASS END=126509188;SVTYPE=DEL;SVLEN=-119 TR:VR 25:8 14:0 chrX 73829100 d_1368 A . PASS END=73831148;SVTYPE=DEL;SVLEN=-2048 TR:VR 26:6 20:0 chr1 113510335 d_43 C . PASS END=113510387;SVTYPE=DEL;SVLEN=-52 TR:VR 33:3 24:0 chr1 169070577 r_50 T . PASS END=169077286;SVTYPE=DUP;SVLEN=6709 TR:VR 62:19 12:0 chr10 11048761 d_124 G . PASS END=11049537;SVTYPE=DEL;SVLEN=-776 TR:VR 62:8 17:0 chr10 3457987 i_65 G . PASS END=3457987;SVTYPE=INS;SVINSLEN=328;SVINSSEQ=TCACACATTGAGATATGCACGCATTCATGCTGGGGTACCCACGCTCTCACACACTGAGGTACGCACGCATTCCCTCTGGGGTACTCACGCTCTCACACACTGAGATACGCACGCATTCCCATTGGGGGTACTTCCTTACGATCTCACACAGTGAGATACGCACGCATTCATGCTGGGGTACTGACGCTCTCACACACTGAGATACGCACGCTTTCCCGCTGGGATACTCACGCTCTCACACACTGAGATACGCACGCATTCATGCTGGGGTACTCACGCTCTCACACACTGAGATACGCATGCATTCCCGCTGGGGTACTCACACTCT TR:VR 52:3 21:0 chr12 37611043 r_189 G . PASS END=41364820;SVTYPE=DEL;SVLEN=-3753777;SVINSLEN=119;SVINSSEQ=TAGAATCTGCAACTGGATATTTAGAGTGCTTTGATGCCTATTTTGGCAAAGGAAATATCCTCACATAAAAACTTGACAGAAGCACTCTCAGAAACTTCTTTGTGATGTGTTCATTCCCC TR:VR 110:24 31:0 chr13 38198194 d_259 T . PASS END=38198886;SVTYPE=DEL;SVLEN=-692 TR:VR 18:5 24:0 chr16 34022475 d_418 A . PASS END=34022910;SVTYPE=DEL;SVLEN=-435 TR:VR 38:5 18:0 chr2 229922228 r_472 G . PASS END=229929326;SVTYPE=DUP;SVLEN=7098 TR:VR 34:7 25:0 chr2 84973417 r_428 T . PASS END=87194666;SVTYPE=DUP;SVLEN=2221249 TR:VR 70:16 45:0 chr20 55331087 d_759 T . Too_small_size END=55331132;SVTYPE=DEL;SVLEN=-45 TR:VR 33:6 15:0 chr22 21758365 r_517_0 A A[chr7:46734500[ . PASS SVTYPE=BND;MATEID=r_517_1 TR:VR 82:8 26:0 chr7 46734500 r_517_1 T ]chr22:21758365]T . PASS SVTYPE=BND;MATEID=r_517_0 TR:VR 82:8 26:0 chr5 103148545 r_657 A . PASS END=103154357;SVTYPE=DUP;SVLEN=5812 TR:VR 20:4 21:0 chr7 157454263 r_742_0 A [chr7:157465712[ATACACC . PASS SVTYPE=BND;MATEID=r_742_1;SVINSLEN=6;SVINSSEQ=ATACAC TR:VR 38:4 22:0 chr7 157465712 r_742_1 C [chr7:157454263[GTGTATC . PASS SVTYPE=BND;MATEID=r_742_0;SVINSLEN=6;SVINSSEQ=GTGTAT TR:VR 38:4 22:0 chr8 103791262 r_762 A . PASS END=103816781;SVTYPE=DEL;SVLEN=-25519 TR:VR 80:4 25:0 chr9 35071896 d_1217 C . PASS END=35072428;SVTYPE=DEL;SVLEN=-532 TR:VR 41:3 13:0 chrX 126935044 d_1379 T . PASS END=126935096;SVTYPE=DEL;SVLEN=-52 TR:VR 34:5 18:0 chrX 73834375 r_829 G . PASS END=73841667;SVTYPE=DEL;SVLEN=-7292 TR:VR 31:4 24:0 chr1 113545899 r_41_0 C CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT]chrX:11713295] . PASS SVTYPE=BND;MATEID=r_41_1;SVINSLEN=44;SVINSSEQ=TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT TR:VR 73:7 41:0 chrX 11713295 r_41_1 A AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]chr1:113545899] . PASS SVTYPE=BND;MATEID=r_41_0;SVINSLEN=44;SVINSSEQ=AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA TR:VR 73:7 41:0 chr1 2670322 d_13 A . Too_low_VAF END=2670467;SVTYPE=DEL;SVLEN=-145;SVINSLEN=106;SVINSSEQ=CAGACTGGAAGAGCACCCACATGCCCAGGTGAGCCTCTGACAGCCTGTAACAGCACCGTTCACCCCCAGGTACGCACGTGACAGCGTCGAACAGCACCGACACACC TR:VR 116:3 66:0 chr10 112272115 r_127 C . PASS END=112291198;SVTYPE=DUP;SVLEN=19083 TR:VR 43:9 25:0 chr10 34645736 r_103_0 A A[chr5:170077991[ . Too_low_VAF SVTYPE=BND;MATEID=r_103_1 TR:VR 71:3 39:0 chr5 170077991 r_103_1 C ]chr10:34645736]C . Too_low_VAF SVTYPE=BND;MATEID=r_103_0 TR:VR 71:3 39:0 chr11 950682 r_131 G . PASS END=1440720;SVTYPE=DUP;SVLEN=490038;SVINSLEN=5;SVINSSEQ=AATGT TR:VR 54:14 38:0 chr12 37708998 r_190 G . PASS END=38151401;SVTYPE=DEL;SVLEN=-442403;SVINSLEN=129;SVINSSEQ=AATGGACAAATCACAAAACGTTTCTCAGAATGCTTCTGACTAGTTTTTATGTGAAGATTATTCATTTTCACCATTGGCCTTAAACAGCTCAGAAATATACCTTTGCTGATTCTACAAAAAGATTGTTTC TR:VR 58:25 28:0 chr13 45287827 r_220 C . PASS END=45443802;SVTYPE=DUP;SVLEN=155975 TR:VR 44:4 40:0 chr17 236993 d_501 T . PASS END=237061;SVTYPE=DEL;SVLEN=-68 TR:VR 14:8 18:0 chr2 139099096 r_443 T . PASS END=139100831;SVTYPE=DUP;SVLEN=1735 TR:VR 27:3 24:0 chr20 28842060 i_406 G . PASS END=28842060;SVTYPE=INS;SVINSLEN=172;SVINSSEQ=TGGATATTTGGAGCCTTTTGAGGCCTATGGTGGAGAAGGAAATATCTTCACATAAAAACTATGCAGAAGCATTCTGAGAAACCACTTTGTGATGCGTGCATTCACCTCACAGAGTAGAACCTTTCTTTTGATTGAGCAGTTTTGAAACACTCTTTTTGTAGAATCTGCAAAT TR:VR 58:12 43:1 chr20 5548126 d_701 T . PASS END=5548399;SVTYPE=DEL;SVLEN=-273 TR:VR 25:7 17:0 chr22 23204698 d_815 G . Too_small_size END=23204743;SVTYPE=DEL;SVLEN=-45 TR:VR 29:3 11:0 chr3 130301729 r_571 G . PASS END=130307561;SVTYPE=DUP;SVLEN=5832 TR:VR 42:5 19:0 chr6 60231058 i_594 T . PASS END=60231058;SVTYPE=INS;SVINSLEN=619;SVINSSEQ=GGATAGTTAGAGCGCTTTTCAATGCCTGTGGTAGAAAAGGAAATATCTTCATATAAAAAATACACATTATCATTCTCAGAAGCTACTTTGTGATGTGTGAGTTCAACTCACAGAGTTTAACATTCCTTTCGATAGAGTAGTTTTGAAACACTCTTTTTGTACAATTTGCATGTGTATACTTAGAGTGCTTTGAGGCCAATGTTTGAAAGCGAATATCTTCACATAAAAACTAGATAGAAGCATTTTCAGAAACTACTTTGTGATGTTTGCATTCAACCCACAGAGTTGGATATTTCTTTTTATAGAGCAGTTTTGAAACTCTGTTTTCGTAGTGTCTGCAAGAGGACATTTGGACCTCTTTGAGGCCTTCGTTGGAAACGGGATTTCTTCATACAAATCTAGAGAGAGGAATTCACAGAAACTTCTTTGTGATGTGTGCATTGAACTCACAGCGTTGAACATTCCTTTCGATATAGAAGTTTTGAAACACTCTTCATGGAAAAACTAGACAGAATAATTCTCAGAAACTACTATGTGATATGTGCATTCAACTCATAGAGTTTAACTTTTCTTTTGATAGAGCAGTTTTGAAACGCTCTTTTTGTACAATATGCAAAGG TR:VR 42:8 12:0 chr8 104772528 d_1160 G . PASS END=104774254;SVTYPE=DEL;SVLEN=-1726 TR:VR 47:15 22:0 chrX 126938823 d_1380 T . PASS END=126939311;SVTYPE=DEL;SVLEN=-488 TR:VR 35:6 20:0 chrX 76826755 i_785 A . PASS END=76826758;SVTYPE=INS;SVINSLEN=686;SVINSSEQ=CTCCACTTACCCTCTCCATCAGGCACCATCCTGCAGGGCACACTCTGAACAATTGTATGCAGTGAACTTATTTGGAACCAATGACATGCTCATCTGATAAAAAGCACAACAGTTAACGTAGTTACAGGTGAGAACTCAAGCAGCTTCACTCCTTCAAGTGCTGGTTCTTCTGCCTCAGAATTTCCTTAGCTTTCCTTAATTCAAAGTATAATTAATTAGATATAATAGGACAGATTCTCCTTAGGCATCAGTGTCCACATAACCAAACTAAGAAATACATCTGAATATGGACATCTGATGAGGCCACTTGAGAAGCTGATCCCTAGATACAGTCCCTGGACCTCTGATTTTCCTGTGAGATCCCAGCACTCTCTCCTTGCATCCCCAGGCCTCCATCATACAGGGTAGAGGTGCAGGATGGAACAGCCCAGTGGTCCTATAACTTCCAGCTAAATAGAGAAGACTGTCCTGAATGGCCCACCATTCTCTGAGATTCTAACTGCATTGGTCTCATCAGAGTTCACATGGATATTTACCTTAGGCAGCACAGTATTTCCAAGACTTCCAGAGGATCCATCTGTATGTGGACTCTTATTCTTTCCTACCTTATTAAAACCCTTCCCCTGTGTCATCTCAAACTTCAGTTTTGTCACCCTAAAACTCTCCTACATCCCCAAACCCTTCCC TR:VR 28:7 17:0 chr1 113545883 r_42_0 T [chrX:11708472[C . PASS SVTYPE=BND;MATEID=r_42_1 TR:VR 60:7 43:0 chrX 11708472 r_42_1 C [chr1:113545883[C . PASS SVTYPE=BND;MATEID=r_42_0 TR:VR 60:7 43:0 chr10 35050599 r_104_0 T T[chr12:42689494[ . Too_low_VAF SVTYPE=BND;MATEID=r_104_1 TR:VR 102:3 41:0 chr12 42689494 r_104_1 C ]chr10:35050599]C . Too_low_VAF SVTYPE=BND;MATEID=r_104_0 TR:VR 102:3 41:0 chr11 1382585 r_134 A . PASS END=1386657;SVTYPE=DUP;SVLEN=4072 TR:VR 70:25 8:0 chr11 95189069 r_168_0 C C]chr11:125879027] . PASS SVTYPE=BND;MATEID=r_168_1 TR:VR 53:6 48:0 chr11 125879027 r_168_1 A A]chr11:95189069] . PASS SVTYPE=BND;MATEID=r_168_0 TR:VR 53:6 48:0 chr14 39418501 r_240 C . PASS END=39641839;SVTYPE=DEL;SVLEN=-223338 TR:VR 33:11 46:0 chr22 23476232 r_518 A . PASS END=23479474;SVTYPE=DUP;SVLEN=3242 TR:VR 35:6 15:0 chr3 133508386 d_877 A . PASS END=133508486;SVTYPE=DEL;SVLEN=-100 TR:VR 22:3 21:0 chr4 134860748 i_541 T . PASS END=134860764;SVTYPE=INS;SVINSLEN=373;SVINSSEQ=TTTCACTTGAGTGTATTTTTATCTCATTTTATATCATCTGCTGACTTATTATTTATATCTCCTTTTAATAAAGTTTTGTTAGTGATTGTCCTAAGGGTTATACATTCTCTTCCTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTTGCTTTGTCGCCCAGGCTAGAGTGCAGTGGCACAATCTCGGCTCACTGCAACCTCTGCCTCATGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTACGCGCCATCACGCCAGGCTAATTTTTGTATTTTTAGTAGAGATGGGCTTTTGCCATGTTGGTCAGGCTGGTCTCAAACTCCTGACCTTGTGATCCGCCCGCATCGGTCTCATA TR:VR 24:5 21:0 chr5 109354358 i_568 T . PASS END=109354358;SVTYPE=INS;SVINSLEN=1013;SVINSSEQ=ATGATATCTAGAGATATCTATAGATTAGATATCTATGCTATCTAGAGATATCTATAGATTAGATATCTGTGATATCTAGAGATATCTATAGATTGGATATCTATATCTAGAGATATCTATAGATTGGATATCTATGATATCTAGAGATATCTATAGATTAGATATCTATGATATCTAGAGATATCTATAGATTAGATGTCTATGATATCTAGAGATATCTATAGATTAGATAGATATCTAGAGATATCTATAGATTAGATATCTATGATATCTAGAGATATCTATAGATTAGATATCTATGATATCTAGAGATATCTATAGATTAGATATCTATGATATCTAGAGATATCTATAGATTAGATATCTATGATATCTAGAGATATCTATAGATTAGATATCTATGATATCTAGAGATATCTATAGATTAGATATCTATATCTAGAGATGTCTATAGATTAGATATCTATGATGTCTAGAGATGTCTATAGATTAGATATCTATGATGTCTAGAGATTTCTATAGATTAGATATCTATGATGTCTAGAGATTTCTATAGATTAGATATCTATGATGTCTAGAGATATCTATAGATTAGATATCTATGATATCTAGAGATATCTATAGATTAGATATCGATATCTAGAGATATCTATAGATTAGATATCTATATCTAGAGATATCTATAGATTAGATATCTATGATATCTCGAGATATCTATAGATTAGATATCTATGATATCTCGAGATATCTATAGATTAGATATCTATGATATCTCGAGATATCTATAGATTAGATATCTATGATATCTAGAGATATCTATAGATTAGATATCTATGATATCTAGAGATATCTATATAGAATAGATATCTATGATATCTAGAGATATCTATAGATTAGATATCTATGATATCTAGAGATATCTATAGATTAGATATCTATGATATCACTAGAGATATCTATAGATTAGATATCTATGATATCTAGAGAGATATCTATAGATTAGATATCTATGA TR:VR 18:6 12:0 chr8 144625464 d_1184 A . PASS END=144625453;SVTYPE=INS;SVINSLEN=142;SVINSSEQ=GCCCCTGTCCCGGCGGCCCGGTTCACGGAGCACTCACTGCACACTGCGGCAGCCCCTGTCCCGGCGGCCCCGTTCACGGAGCACCCACTGCACACTGCGGCAGCCCCTGTCCCGGCGGCCCGGTTCACGGAGCACCCACTGC TR:VR 54:3 21:0 chr9 100343576 d_1229 A . PASS END=100343637;SVTYPE=DEL;SVLEN=-61;SVINSLEN=2;SVINSSEQ=AA TR:VR 29:9 18:0 chr9 36736171 r_794 A . PASS END=36743910;SVTYPE=DUP;SVLEN=7739 TR:VR 50:5 14:0 chrX 12821495 r_821 G . PASS END=12907985;SVTYPE=DUP;SVLEN=86490;SVINSLEN=3;SVINSSEQ=TTT TR:VR 41:7 26:0 chr1 114712804 r_43_0 A A]chr1:185306438] . PASS SVTYPE=BND;MATEID=r_43_1 TR:VR 51:7 30:0 chr1 185306438 r_43_1 A A]chr1:114712804] . PASS SVTYPE=BND;MATEID=r_43_0 TR:VR 51:7 30:0 chr1 1740766 d_5 A . PASS END=1742413;SVTYPE=DEL;SVLEN=-1647;SVINSLEN=3;SVINSSEQ=CCG TR:VR 31:4 12:0 chr10 112934316 d_174 T . PASS END=112935096;SVTYPE=DEL;SVLEN=-780 TR:VR 18:7 19:0 chr10 35071037 r_105_0 A A[chr19:9941976[ . PASS SVTYPE=BND;MATEID=r_105_1 TR:VR 74:27 35:0 chr19 9941976 r_105_1 T ]chr10:35071037]T . PASS SVTYPE=BND;MATEID=r_105_0 TR:VR 74:27 35:0 chr11 95189072 r_169_0 T [chr11:125879026[T . PASS SVTYPE=BND;MATEID=r_169_1 TR:VR 53:3 48:0 chr11 125879026 r_169_1 T [chr11:95189072[T . PASS SVTYPE=BND;MATEID=r_169_0 TR:VR 53:3 48:0 chr12 37951935 d_234 C . PASS END=37953418;SVTYPE=DEL;SVLEN=-1483 TR:VR 15:6 21:0 chr13 47042608 d_260 T . PASS END=47042825;SVTYPE=DEL;SVLEN=-217 TR:VR 21:9 19:0 chr14 39961226 r_241 T . PASS END=39962989;SVTYPE=DUP;SVLEN=1763 TR:VR 30:3 18:0 chr16 34067884 r_302_0 A A]chr22_KI270735v1_random:42763] . Too_low_VAF SVTYPE=BND;MATEID=r_302_1 TR:VR 204:3 107:0 chr22_KI270735v1_random 42763 r_302_1 C C]chr16:34067884] . Too_low_VAF SVTYPE=BND;MATEID=r_302_0 TR:VR 204:3 107:0 chr20 55830236 r_493 A . PASS END=55834311;SVTYPE=DUP;SVLEN=4075 TR:VR 52:4 19:0 chr21 45345891 i_457 T . PASS END=45345891;SVTYPE=INS;SVINSLEN=566;SVINSSEQ=CGCTTCCAGCTGGATTTTCAACGCAGGGAATTGGTTAGACGTCCCTGGCGGGGTGTGTCGCTTCCAGCTGGATTTTCAACACAGGGAATTGGTTAGACGTCCCTGGCGGGTGTGTCGCTTCCAGCTGGATTTTCAACACAGGGAATTGGTTAGACGTCCCTGGCGGGGTGTGTCGCTTCCCCCTGGATTTTCAACGCAGGGAATTGGTTACACGTCCCTGGCGGGGTGTGTCGCTTCCCACTGGATTTTCAACACAGGGAATTGGTTAGACGTCCCTGGCGGGGTGTGTCGCTTCCAGCTGGATTTTCAACACAGGGAATTGGTAACACGTCCCTGGCGGGGTGTGTCGCTTCCCACTGGATTTTCAACACAGGGAATTGGTTAGACGTCCCTGGCGGGGTGTGTCGCTTCCGCACTGGATTTTCAATGCAGGGAATTGGTTAGACGTCCCTGGCGGGGTGTGTTGCTTCCAGCTGGATTTTCAACACAGGGAATTGGTTAGACGTCCCTGGCGGGGTGTGTCGCTTCCAGCTGGATTTTCAACACAGGGAATTGGTTAGACGTCC TR:VR 31:4 16:0 chr3 20490547 d_846 A . PASS END=20490640;SVTYPE=DEL;SVLEN=-93;SVINSLEN=10;SVINSSEQ=ATGAAGATTA TR:VR 23:5 14:0 chr5 11468327 r_646 A . PASS END=11476506;SVTYPE=DUP;SVLEN=8179 TR:VR 33:5 16:0 chr6 61419329 i_595 T . PASS END=61419329;SVTYPE=INS;SVINSLEN=400;SVINSSEQ=ATATTTACAGCGCTTTGAGGCCTATTGTATAAAAGGAAATTTCTTAACATAAAAACTAGACAGAAGCATTCTCAGAAACTACATTGTGATGTTTGCATTCAACTCACAGAATTGAACATTCCTTATGATAGAACAGTTTTGTAACACTCTTTTTGTAGAATCTGCAAGTGGATATTTGGATATCTTTGATTCCTTCATTGGAAAGGGAATTTGTATAATTTTCAAGTGGATATTTAGAGCGCTTTGAGGCCTATGGTAGAAAAGGAAATATCTTCATATTAAAACTAGACAGAATTATTCTATGAAACTACTTTGTGATGTGTGGGTTCAACTCACAGAGTTTAACCTTTCCTTTGATAGAGCAGTTTTGAAACACTCTTTTTGTAGTTCTTGCAAGTGG TR:VR 39:7 17:0 chr8 108190484 r_764 A . PASS END=108197761;SVTYPE=DUP;SVLEN=7277 TR:VR 50:3 21:0 chr8 15239807 r_743 T . PASS END=15243814;SVTYPE=DUP;SVLEN=4007 TR:VR 29:3 22:0 chr9 100480503 d_1230 T . PASS END=100480573;SVTYPE=DEL;SVLEN=-70 TR:VR 27:7 25:0 chr9 36799805 r_795 T . PASS END=36806914;SVTYPE=DUP;SVLEN=7109 TR:VR 50:6 16:0 chrX 128632958 r_840 C . PASS END=129427161;SVTYPE=DUP;SVLEN=794203 TR:VR 88:23 32:0 chrX 78422277 d_1369 T . Too_small_size END=78422313;SVTYPE=DEL;SVLEN=-36 TR:VR 21:5 19:0 chr1 26830273 r_11 G . PASS END=26837207;SVTYPE=DUP;SVLEN=6934 TR:VR 40:11 20:0 chr10 115051640 r_128 A . PASS END=115057937;SVTYPE=DUP;SVLEN=6297 TR:VR 25:6 16:0 chr11 96390231 r_170 T . PASS END=96394947;SVTYPE=DUP;SVLEN=4716 TR:VR 51:9 19:0 chr12 38167956 i_133 T . PASS END=38167956;SVTYPE=INS;SVINSLEN=106;SVINSSEQ=TACCATGCCTCTTTAGCTTCCCTAAACCTAGAACAATCCATCTAGTCTTTTGTGTCTTTCATGACATTAACATGTTTGAAGATTCCAGACCAGCTATTTTGTACAG TR:VR 51:7 8:0 chr13 47429165 r_221 G . PASS END=47434710;SVTYPE=DUP;SVLEN=5545 TR:VR 30:8 14:0 chr18 51837663 r_375 T . PASS END=51839632;SVTYPE=DUP;SVLEN=1969 TR:VR 33:4 30:0 chr2 142751056 d_665 C . PASS END=142753078;SVTYPE=DEL;SVLEN=-2022 TR:VR 22:6 30:0 chr2 23403588 d_622 A . Too_small_size END=23403627;SVTYPE=DEL;SVLEN=-39 TR:VR 19:9 14:0 chr20 57482591 r_494 C . PASS END=57715554;SVTYPE=DEL;SVLEN=-232963 TR:VR 54:3 34:0 chr3 136723650 r_572 G . Too_low_VAF END=136847072;SVTYPE=DUP;SVLEN=123422;SVINSLEN=71;SVINSSEQ=CGCCTCTGCCTGGCCGCACCTACTTGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAAG TR:VR 63:3 43:0 chr3 2052288 d_841 C . PASS END=2055653;SVTYPE=DEL;SVLEN=-3365 TR:VR 31:3 21:0 chr4 1377310 r_588 A . PASS END=44747122;SVTYPE=DEL;SVLEN=-43369812 TR:VR 53:4 31:0 chr6 61419540 i_596 T . PASS END=61419540;SVTYPE=INS;SVINSLEN=231;SVINSSEQ=TGTATAATTTTCAAGTGGATATTTAGAGCGCTTTGAGGCCTATGGTAGAAAAGGAAATATCTTCATATTAAAACTAGACAGAATTATTCTATGAAACTACTTTGTGATGTGTGGGTTCAACTCACAGAGTTTAACCTTTCCTTTGATAGAGCAGTTTTGAAACACTCTTTTTGTAGTTCTTGCAAGTGGATATTTGGGGTGCTTTGAGGCCTATGGTAGAAAAGGAAATAT TR:VR 41:7 17:0 chr8 108612796 d_1161 T . PASS END=108613752;SVTYPE=DEL;SVLEN=-956 TR:VR 39:12 20:0 chr9 10320 d_1185 T . PASS END=10365;SVTYPE=INS;SVINSLEN=205;SVINSSEQ=CACCCCTCACCCTAACCCCCTGGCCACTGCCCAAGCCTGGCCCCTAACCCTGGCCGGCCCTGGCCCTGGCCCCTGGCCCTGGCCCTGGCCCTGGCCCTGGCCCCTGGCCCCTGGCCCTGGCCCCTGGCCTCTGCCCTGGGCCTAGGCCCTAGGCCCTGGCCCTGGCAACTGGCCTAGCTGCCTGACCCTGCCGGACCCGGGCCCG TR:VR 59:4 31:0 chr9 37416835 r_796 C . Too_low_VAF END=37506990;SVTYPE=DUP;SVLEN=90155 TR:VR 62:3 24:0 chrX 80007802 d_1370 T . PASS END=80008193;SVTYPE=DEL;SVLEN=-391 TR:VR 31:3 18:0 chr1 116244590 d_45 T . PASS END=116244705;SVTYPE=DEL;SVLEN=-115 TR:VR 22:3 18:0 chr10 36696379 r_106_0 T [chr14:98647339[A . PASS SVTYPE=BND;MATEID=r_106_1 TR:VR 74:16 33:0 chr14 98647339 r_106_1 A [chr10:36696379[A . PASS SVTYPE=BND;MATEID=r_106_0 TR:VR 74:16 33:0 chr12 39074157 r_191 C . PASS END=41332680;SVTYPE=DEL;SVLEN=-2258523 TR:VR 76:33 29:0 chr17 28900337 r_332_0 C C]chr9:34206100] . Too_low_VAF SVTYPE=BND;MATEID=r_332_1 TR:VR 72:3 33:0 chr9 34206100 r_332_1 A A]chr17:28900337] . Too_low_VAF SVTYPE=BND;MATEID=r_332_0 TR:VR 72:3 33:0 chr19 34392692 i_332 G . PASS END=34392706;SVTYPE=INS;SVINSLEN=336;SVINSSEQ=GTAGGATCTTGGTACCTTGTACTGAGGATCTTGGTCTGTCCATATCTGAGGAGGTAGGAATCTGGTACAGGTATGAGGATCTGGGTCTGTTCATGTCTGAGAGGGAGGGTCTGGCAAGTGGTGGGGAGGATCTGGGTCTTGATCATGTGTCTTGAGGAGGTAGGGATCTGGCCCAGTGTATGAGGATCTGGGTCTGTTAATATCTGAGAGGTAGGAATCCTGGCCTTGGTAAGCAGGACTGGGTCTCTGTCATGTCTGAGGAGGTAGGATCTGGGTTCTAGGCATGAGGATCTGGGTCTGTCCATGTCTGAGGTTAGCTCTCTCATCTGGCCCAGA TR:VR 52:5 31:0 chr2 142876048 r_446 G . PASS END=163140612;SVTYPE=DUP;SVLEN=20264564 TR:VR 39:5 32:0 chr22 24573236 r_521_0 G G]chr3:90473021] . PASS SVTYPE=BND;MATEID=r_521_1 TR:VR 50:6 50:0 chr3 90473021 r_521_1 A A]chr22:24573236] . PASS SVTYPE=BND;MATEID=r_521_0 TR:VR 50:6 50:0 chr4 138794828 r_636 A . PASS END=138799595;SVTYPE=DUP;SVLEN=4767 TR:VR 27:3 13:0 chr8 108621234 d_1162 C . PASS END=108621286;SVTYPE=DEL;SVLEN=-52 TR:VR 43:3 16:0 chr9 38078520 d_1218 T . PASS END=38078576;SVTYPE=DEL;SVLEN=-56 TR:VR 28:5 6:0 chrX 128772371 r_841_0 G [chrX:128774176[C . PASS SVTYPE=BND;MATEID=r_841_1 TR:VR 78:7 18:0 chrX 128774176 r_841_1 C [chrX:128772371[C . PASS SVTYPE=BND;MATEID=r_841_0 TR:VR 78:7 18:0 chrX 82722125 d_1371 T . PASS END=82722520;SVTYPE=DEL;SVLEN=-395 TR:VR 27:4 13:0 chr1 116405573 r_44 G . PASS END=116432471;SVTYPE=DEL;SVLEN=-26898 TR:VR 46:15 28:0 chr1 179444697 d_91 C . PASS END=179445048;SVTYPE=DEL;SVLEN=-351 TR:VR 36:7 17:0 chr10 11728881 d_125 C . PASS END=11728932;SVTYPE=DEL;SVLEN=-51 TR:VR 61:9 23:0 chr10 37319566 d_133 C . PASS END=37319617;SVTYPE=DEL;SVLEN=-51 TR:VR 51:5 12:0 chr10 71910425 d_166 T . Too_small_size END=71910467;SVTYPE=DEL;SVLEN=-42 TR:VR 14:3 12:0 chr11 98420570 i_115 A . PASS END=98420570;SVTYPE=INS;SVINSLEN=210;SVINSSEQ=TAGATTTTGTTATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCACATTACATTGTTGTGTATTTACCCTTTGCCGCTTTTGATGCATTTGCATATCATCTTTTATAATTCAATTCACTTGCTTAAATCATGTCTTTTATTTTCACTTATTTATCCAGAAGGAAAAGTTCATTGCTTCTATTTCATGCTCCT TR:VR 31:6 13:0 chr12 39824589 r_192_0 G ]chr21:19209905]T . PASS SVTYPE=BND;MATEID=r_192_1 TR:VR 41:5 25:0 chr21 19209905 r_192_1 T T[chr12:39824589[ . PASS SVTYPE=BND;MATEID=r_192_0 TR:VR 41:5 25:0 chr13 49548803 r_223 G . PASS END=49702785;SVTYPE=DUP;SVLEN=153982;SVINSLEN=1;SVINSSEQ=T TR:VR 39:3 36:0 chr18 58780276 r_376 A . Too_low_VAF END=58873881;SVTYPE=DUP;SVLEN=93605 TR:VR 61:3 32:0 chr22 28497488 r_522_0 T T]chr4:135085398] . PASS SVTYPE=BND;MATEID=r_522_1 TR:VR 44:3 27:0 chr4 135085398 r_522_1 A A]chr22:28497488] . PASS SVTYPE=BND;MATEID=r_522_0 TR:VR 44:3 27:0 chr3 23797920 r_543 T . PASS END=23807433;SVTYPE=DUP;SVLEN=9513 TR:VR 42:4 16:0 chr4 139251569 r_637 A . PASS END=139260129;SVTYPE=DUP;SVLEN=8560 TR:VR 23:3 20:0 chr6 61424683 i_598 G . PASS END=61424683;SVTYPE=INS;SVINSLEN=342;SVINSSEQ=AGCATCTTTACATAAAAAGTAGACAGAAGTATTCTCAGAAACTTCTTTGTGATGTCTGCACTCAACTCACAGAGTTGAATATTCCTTTTGATACAGTAGTTTTGAAACACTCTTTCTGCAGAATTTACAAGTGTATATTTAGAGGGCTTTGAGGCGTATGGTAGAAAAGGAAGTATCTTCACATAGAAACTAGACTGAAGCATCCTGAGAAACTACCTTGTGATGTTTGCATTCAACTCAGAGAGTTCAAGATTCCTTTTGTAGAGCTGTTTTGAAAAGCTCTTTCTGTAGAATTTGCGAGTGTGTGTTTAGAGGGCTTTGAGGCCTATGGTAGAAAACGAA TR:VR 40:6 15:0 chr9 38196723 d_1219 T . Too_small_size END=38196763;SVTYPE=DEL;SVLEN=-40 TR:VR 30:4 19:0 chrX 130288875 r_842_0 A [chrX:131857881[T . PASS SVTYPE=BND;MATEID=r_842_1 TR:VR 70:5 38:0 chrX 131857881 r_842_1 T [chrX:130288875[T . PASS SVTYPE=BND;MATEID=r_842_0 TR:VR 70:5 38:0 chr1 1841331 r_1 G . PASS END=1847646;SVTYPE=DUP;SVLEN=6315 TR:VR 35:7 22:0 chr10 118774160 d_175 T . PASS END=118774209;SVTYPE=DEL;SVLEN=-49 TR:VR 16:6 8:0 chr12 41534513 r_193_0 T ]chr15:101227466]T . PASS SVTYPE=BND;MATEID=r_193_1 TR:VR 114:6 31:0 chr15 101227466 r_193_1 T T[chr12:41534513[ . PASS SVTYPE=BND;MATEID=r_193_0 TR:VR 114:6 31:0 chr16 34114622 r_303_0 G GGAGTTTGGAAACAGTCTTTTTTAATATTCTTCAAGTGAATATACGTGAGCACTTTGAGGCTCATGGTGAAAAAGGAAACATTCACATAAAAATTTAATAGAAGCTTTCTGAGAAACTTCTTTTTGATG[chr4:53571072[ . PASS SVTYPE=BND;MATEID=r_303_1;SVINSLEN=128;SVINSSEQ=GAGTTTGGAAACAGTCTTTTTTAATATTCTTCAAGTGAATATACGTGAGCACTTTGAGGCTCATGGTGAAAAAGGAAACATTCACATAAAAATTTAATAGAAGCTTTCTGAGAAACTTCTTTTTGATG TR:VR 86:5 37:0 chr4 53571072 r_303_1 T ]chr16:34114622]CATCAAAAAGAAGTTTCTCAGAAAGCTTCTATTAAATTTTTATGTGAATGTTTCCTTTTTCACCATGAGCCTCAAAGTGCTCACGTATATTCACTTGAAGAATATTAAAAAAGACTGTTTCCAAACTCT . PASS SVTYPE=BND;MATEID=r_303_0;SVINSLEN=128;SVINSSEQ=CATCAAAAAGAAGTTTCTCAGAAAGCTTCTATTAAATTTTTATGTGAATGTTTCCTTTTTCACCATGAGCCTCAAAGTGCTCACGTATATTCACTTGAAGAATATTAAAAAAGACTGTTTCCAAACTC TR:VR 86:5 37:0 chr17 29273260 d_513 G . PASS END=29273392;SVTYPE=DEL;SVLEN=-132 TR:VR 22:3 15:0 chr18 58784306 d_562 A . PASS END=58784367;SVTYPE=DEL;SVLEN=-61 TR:VR 39:25 18:0 chr19 35906553 d_598 T . PASS END=35906686;SVTYPE=DEL;SVLEN=-133 TR:VR 31:6 17:0 chr22 30028526 r_524_0 T ]chr4:190122872]GGGTTAAGGTCAGGGTTAGGGGGTTAAGGTCAGGGTCAGGGTCGGGGTCAGGGTCAGGGTCAGGGTCAGGGTCAGGGTTAGGGGGTTAAAGTCAGGGTTAGGGGGTTAAGGTCAGGGTCGGGGTCGGGGTCGGGGTCGGGGTCGGGGGTTAGGGG . PASS SVTYPE=BND;MATEID=r_524_1;SVINSLEN=154;SVINSSEQ=GGGTTAAGGTCAGGGTTAGGGGGTTAAGGTCAGGGTCAGGGTCGGGGTCAGGGTCAGGGTCAGGGTCAGGGTCAGGGTTAGGGGGTTAAAGTCAGGGTTAGGGGGTTAAGGTCAGGGTCGGGGTCGGGGTCGGGGTCGGGGTCGGGGGTTAGGG TR:VR 52:3 57:0 chr4 190122872 r_524_1 G GCCCTAACCCCCGACCCCGACCCCGACCCCGACCCCGACCCTGACCTTAACCCCCTAACCCTGACTTTAACCCCCTAACCCTGACCCTGACCCTGACCCTGACCCTGACCCCGACCCTGACCCTGACCTTAACCCCCTAACCCTGACCTTAACCC[chr22:30028526[ . PASS SVTYPE=BND;MATEID=r_524_0;SVINSLEN=154;SVINSSEQ=CCCTAACCCCCGACCCCGACCCCGACCCCGACCCCGACCCTGACCTTAACCCCCTAACCCTGACTTTAACCCCCTAACCCTGACCCTGACCCTGACCCTGACCCTGACCCCGACCCTGACCCTGACCTTAACCCCCTAACCCTGACCTTAACCC TR:VR 52:3 57:0 chr8 113108598 r_766_0 T T]chr8:113109223] . PASS SVTYPE=BND;MATEID=r_766_1 TR:VR 44:8 22:0 chr8 113109223 r_766_1 A A]chr8:113108598] . PASS SVTYPE=BND;MATEID=r_766_0 TR:VR 44:8 22:0 chr9 105157608 d_1231 A . PASS END=105158222;SVTYPE=DEL;SVLEN=-614 TR:VR 39:19 18:0 chr9 38376117 r_797 A . PASS END=38402217;SVTYPE=DUP;SVLEN=26100;SVINSLEN=3;SVINSSEQ=CCC TR:VR 66:8 36:0 chrX 130498959 d_1381 A . PASS END=130499009;SVTYPE=DEL;SVLEN=-50 TR:VR 30:4 6:0 chrX 86551049 r_831 A . PASS END=86571655;SVTYPE=DEL;SVLEN=-20606;SVINSLEN=1;SVINSSEQ=T TR:VR 25:4 38:0 chr10 11882109 r_82_0 T ]chr9:36441682]C . PASS SVTYPE=BND;MATEID=r_82_1 TR:VR 97:7 24:0 chr9 36441682 r_82_1 C C[chr10:11882109[ . PASS SVTYPE=BND;MATEID=r_82_0 TR:VR 97:7 24:0 chr10 73289394 d_168 T . Too_small_size END=73289429;SVTYPE=DEL;SVLEN=-35 TR:VR 22:4 24:0 chr11 18494354 r_141 G . PASS END=18495112;SVTYPE=DEL;SVLEN=-758 TR:VR 20:11 17:0 chr12 41562235 r_194_0 T T[chr8:124314270[ . Too_low_VAF SVTYPE=BND;MATEID=r_194_1 TR:VR 152:5 34:0 chr8 124314270 r_194_1 C ]chr12:41562235]C . Too_low_VAF SVTYPE=BND;MATEID=r_194_0 TR:VR 152:5 34:0 chr15 20988512 r_272_0 C [chr6:78485258[CT . Too_low_VAF SVTYPE=BND;MATEID=r_272_1;SVINSLEN=1;SVINSSEQ=C TR:VR 94:4 61:0 chr6 78485258 r_272_1 T [chr15:20988512[GT . Too_low_VAF SVTYPE=BND;MATEID=r_272_0;SVINSLEN=1;SVINSSEQ=G TR:VR 94:4 61:0 chr22 30028526 r_523_0 T ]chr4:190122790]GGTTAAGGTCAGGGTTAGGGGGTTAAGGTCAGGGTCAGGGTCAGGGTCAGGGTCAGGGTCAGGGTCAGGGTCAGGGTTAGGGGGTTAAAGTCAGGTTAGGGGGTTAAGGTCAGGTCGGGGTCGGGGTCGGGGTCGGGGTCGGGGGTTAGGGG . PASS SVTYPE=BND;MATEID=r_523_1;SVINSLEN=151;SVINSSEQ=GGTTAAGGTCAGGGTTAGGGGGTTAAGGTCAGGGTCAGGGTCAGGGTCAGGGTCAGGGTCAGGGTCAGGGTCAGGGTTAGGGGGTTAAAGTCAGGTTAGGGGGTTAAGGTCAGGTCGGGGTCGGGGTCGGGGTCGGGGTCGGGGGTTAGGG TR:VR 53:8 60:0 chr4 190122790 r_523_1 G GCCCTAACCCCCGACCCCGACCCCGACCCCGACCCCGACCTGACCTTAACCCCCTAACCTGACTTTAACCCCCTAACCCTGACCCTGACCCTGACCCTGACCCTGACCCTGACCCTGACCCTGACCTTAACCCCCTAACCCTGACCTTAACC[chr22:30028526[ . PASS SVTYPE=BND;MATEID=r_523_0;SVINSLEN=151;SVINSSEQ=CCCTAACCCCCGACCCCGACCCCGACCCCGACCCCGACCTGACCTTAACCCCCTAACCTGACTTTAACCCCCTAACCCTGACCCTGACCCTGACCCTGACCCTGACCCTGACCCTGACCCTGACCTTAACCCCCTAACCCTGACCTTAACC TR:VR 53:8 60:0 chr3 142017213 d_878 A . PASS END=142017422;SVTYPE=DEL;SVLEN=-209 TR:VR 35:19 16:0 chr3 2781098 d_842 A . Too_small_size END=2781142;SVTYPE=DEL;SVLEN=-44 TR:VR 39:5 15:0 chr5 119466388 d_1023 A . PASS END=119466525;SVTYPE=DEL;SVLEN=-137 TR:VR 18:9 14:0 chr6 65003927 d_1060 C . Too_small_size END=65003967;SVTYPE=DEL;SVLEN=-40 TR:VR 35:14 19:0 chr8 113877168 d_1163 A . PASS END=113877224;SVTYPE=DEL;SVLEN=-56 TR:VR 22:5 13:0 chr8 22191684 r_744 C . PASS END=22207543;SVTYPE=DUP;SVLEN=15859 TR:VR 38:8 27:0 chrX 134313264 d_1382 A . PASS END=134313497;SVTYPE=DEL;SVLEN=-233 TR:VR 35:26 12:0 chrX 87658008 d_1372 G . Too_small_size END=87658045;SVTYPE=DEL;SVLEN=-37 TR:VR 14:5 19:0 chr1 189452045 d_92 A . Too_small_size END=189452085;SVTYPE=DEL;SVLEN=-40 TR:VR 10:3 14:0 chr1 30952599 r_12 T . PASS END=30957282;SVTYPE=DUP;SVLEN=4683 TR:VR 29:5 22:0 chr10 11885317 i_69 G . Too_low_VAF END=11885317;SVTYPE=INS;SVINSLEN=76;SVINSSEQ=AGGGGGATGGGTGGGTGGAGATAGAGGCGGAGCTGGGAGGAGATGGGTGGGTAGAGATGGAAGAGGCCGAGCTGAG TR:VR 65:3 13:0 chr12 105639732 d_242 T . PASS END=105640141;SVTYPE=DEL;SVLEN=-409 TR:VR 24:10 23:0 chr12 41583212 d_235 A . Too_low_VAF END=41583274;SVTYPE=DEL;SVLEN=-62 TR:VR 99:3 20:0 chr14 46655484 r_242_0 A ]chr2:204419553]C . PASS SVTYPE=BND;MATEID=r_242_1 TR:VR 60:7 33:0 chr2 204419553 r_242_1 C C[chr14:46655484[ . PASS SVTYPE=BND;MATEID=r_242_0 TR:VR 60:7 33:0 chr15 20989048 r_273_0 A A]chr15:20994352] . Too_low_VAF SVTYPE=BND;MATEID=r_273_1 TR:VR 91:4 52:0 chr15 20994352 r_273_1 T T]chr15:20989048] . Too_low_VAF SVTYPE=BND;MATEID=r_273_0 TR:VR 91:4 52:0 chr16 36098545 r_304_0 A A[chr22_KI270737v1_random:85373[ . PASS SVTYPE=BND;MATEID=r_304_1 TR:VR 79:5 46:1 chr22_KI270737v1_random 85373 r_304_1 A ]chr16:36098545]A . PASS SVTYPE=BND;MATEID=r_304_0 TR:VR 79:5 46:1 chr17 33458188 r_334_0 G ]chr7:16233245]G . PASS SVTYPE=BND;MATEID=r_334_1 TR:VR 45:6 38:0 chr7 16233245 r_334_1 G G[chr17:33458188[ . PASS SVTYPE=BND;MATEID=r_334_0 TR:VR 45:6 38:0 chr18 64672354 d_564 G . Too_small_size END=64672397;SVTYPE=DEL;SVLEN=-43 TR:VR 35:20 17:0 chr19 37162168 r_391 C . PASS END=37332222;SVTYPE=DUP;SVLEN=170054 TR:VR 69:5 38:0 chr2 146263358 r_447_0 G G[chr4:15846102[ . PASS SVTYPE=BND;MATEID=r_447_1 TR:VR 50:3 46:0 chr4 15846102 r_447_1 C ]chr2:146263358]C . PASS SVTYPE=BND;MATEID=r_447_0 TR:VR 50:3 46:0 chr22 31214671 r_525 T . PASS END=31221068;SVTYPE=DUP;SVLEN=6397 TR:VR 38:5 17:0 chr3 145321732 d_879 A . PASS END=145321931;SVTYPE=DEL;SVLEN=-199;SVINSLEN=5;SVINSSEQ=GACCA TR:VR 35:6 19:0 chr6 66026489 d_1061 T . PASS END=66026902;SVTYPE=DEL;SVLEN=-413 TR:VR 23:4 14:0 chr7 159202666 i_654 T . Too_small_size END=159202666;SVTYPE=INS;SVINSLEN=40;SVINSSEQ=GGGATCCAGGATGCCCCTATCCATGAGGAGGACGGCCTGG TR:VR 19:3 21:0 chr8 114703846 r_767 G . PASS END=114706891;SVTYPE=DUP;SVLEN=3045 TR:VR 29:6 17:0 chrX 136444453 d_1383 T . Too_small_size END=136444489;SVTYPE=DEL;SVLEN=-36 TR:VR 56:23 25:0 chrX 88556392 d_1373 G . Too_small_size END=88556432;SVTYPE=DEL;SVLEN=-40 TR:VR 19:3 20:0 chr1 191197646 r_53_0 G [chr2:149383895[T . PASS SVTYPE=BND;MATEID=r_53_1 TR:VR 66:4 39:0 chr2 149383895 r_53_1 T [chr1:191197646[T . PASS SVTYPE=BND;MATEID=r_53_0 TR:VR 66:4 39:0 chr1 31175927 d_24 A . Too_small_size END=31175966;SVTYPE=DEL;SVLEN=-39 TR:VR 26:3 15:0 chr10 38975508 r_107_0 C [chr10:38976223[A . PASS SVTYPE=BND;MATEID=r_107_1 TR:VR 50:3 17:0 chr10 38976223 r_107_1 A [chr10:38975508[A . PASS SVTYPE=BND;MATEID=r_107_0 TR:VR 50:3 17:0 chr11 19659495 d_194 T . Too_small_size END=19659540;SVTYPE=DEL;SVLEN=-45 TR:VR 22:9 17:0 chr12 41786188 d_236 G . Too_small_size END=41786232;SVTYPE=DEL;SVLEN=-44 TR:VR 78:18 16:0 chr13 55322823 d_262 T . PASS END=55323940;SVTYPE=DEL;SVLEN=-1117 TR:VR 19:3 18:0 chr14 49403548 r_243 T . PASS END=49416105;SVTYPE=DUP;SVLEN=12557 TR:VR 60:13 25:0 chr15 20989442 r_274_0 T [chr15:20998079[T . PASS SVTYPE=BND;MATEID=r_274_1 TR:VR 96:5 56:0 chr15 20998079 r_274_1 T [chr15:20989442[T . PASS SVTYPE=BND;MATEID=r_274_0 TR:VR 96:5 56:0 chr16 36188189 d_420 A . PASS END=36188369;SVTYPE=DEL;SVLEN=-180 TR:VR 24:6 20:0 chr16 46615961 r_306_0 G [chr4:48188169[A . PASS SVTYPE=BND;MATEID=r_306_1 TR:VR 87:8 27:0 chr4 48188169 r_306_1 A [chr16:46615961[A . PASS SVTYPE=BND;MATEID=r_306_0 TR:VR 87:8 27:0 chr17 34063563 r_335_0 A A[chr7:16232990[ . PASS SVTYPE=BND;MATEID=r_335_1 TR:VR 44:6 40:0 chr7 16232990 r_335_1 A ]chr17:34063563]A . PASS SVTYPE=BND;MATEID=r_335_0 TR:VR 44:6 40:0 chr18 65062188 r_377_0 C C]chr18:65078493] . PASS SVTYPE=BND;MATEID=r_377_1 TR:VR 34:8 31:0 chr18 65078493 r_377_1 A A]chr18:65062188] . PASS SVTYPE=BND;MATEID=r_377_0 TR:VR 34:8 31:0 chr2 149524694 d_666 A . PASS END=149524894;SVTYPE=DEL;SVLEN=-200 TR:VR 29:4 18:0 chr22 31659055 r_526 T . PASS END=31664720;SVTYPE=DUP;SVLEN=5665 TR:VR 41:3 22:0 chr3 147876239 d_880 A . PASS END=147878325;SVTYPE=DEL;SVLEN=-2086 TR:VR 42:7 21:0 chr3 32824885 d_848 C . Too_small_size END=32824925;SVTYPE=DEL;SVLEN=-40 TR:VR 29:7 17:0 chr4 145472545 d_963 A . PASS END=145472932;SVTYPE=DEL;SVLEN=-387 TR:VR 14:6 12:0 chr6 72131314 d_1062 A . Too_small_size END=72131350;SVTYPE=DEL;SVLEN=-36 TR:VR 30:13 22:0 chr8 115928410 r_768 T . PASS END=115981748;SVTYPE=DUP;SVLEN=53338 TR:VR 59:3 43:0 chr8 27919273 i_660 A . PASS END=27919273;SVTYPE=INS;SVINSLEN=276;SVINSSEQ=GGGAAGGAGGAGGAGGAAGGGAAGAGGAGGAGAGAAGGAGGAGGAGGAGAGGAGGAGGAGGAGGAGGAGAAGAGGAGGAGGAGGAGGGAGAGAGGAGGAGGGAGGAGAAGAGGAGGAGGAGGAGAAAGGGCAGAGAGGGAGGAGGAGGAGAAAGGGAGGAGGAGGAGGGAAAGAAGAGGATAAGGGAGGAGGAGGAGAGGGAAGGAGGAGGAGGGAGGAGAAGGAGGGGAGGAGGAGGAGAAGAGGGGAGGAGGAAGGAGAAGGAGGAGGAGGAGG TR:VR 17:3 20:0 chrX 138354899 r_843_0 T T]chrX:138381290] . PASS SVTYPE=BND;MATEID=r_843_1 TR:VR 67:23 24:0 chrX 138381290 r_843_1 T T]chrX:138354899] . PASS SVTYPE=BND;MATEID=r_843_0 TR:VR 67:23 24:0 chr1 191882227 r_54 G . PASS END=227781911;SVTYPE=DEL;SVLEN=-35899684 TR:VR 67:6 36:0 chr1 31494756 i_11 T . PASS END=31494762;SVTYPE=INS;SVINSLEN=283;SVINSSEQ=TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATATATATTATATATAATACATGTATATATAATATATTTTATATATATTTTTTATAATATATTTATATATTATACATTTTATATAATATATTTTATATATAATATATATTACATATTATATTATTTTTAAATATATTATATAATACATGTATTATTATATTA TR:VR 23:3 21:0 chr10 12107430 r_83_0 T T[chr2:118784561[ . PASS SVTYPE=BND;MATEID=r_83_1 TR:VR 91:5 42:0 chr2 118784561 r_83_1 T ]chr10:12107430]T . PASS SVTYPE=BND;MATEID=r_83_0 TR:VR 91:5 42:0 chr13 59042751 d_263 A . PASS END=59042802;SVTYPE=DEL;SVLEN=-51 TR:VR 34:18 21:0 chr14 50220886 r_244 A . PASS END=50230901;SVTYPE=DUP;SVLEN=10015 TR:VR 51:4 29:0 chr2 150970093 d_667 G . Too_small_size END=150970129;SVTYPE=DEL;SVLEN=-36 TR:VR 35:15 22:0 chr22 32159928 r_527 T . PASS END=34573743;SVTYPE=DEL;SVLEN=-2413815 TR:VR 50:14 37:0 chr3 149206631 d_881 A . Too_small_size END=149206673;SVTYPE=DEL;SVLEN=-42 TR:VR 39:27 20:0 chr4 145696028 r_639_0 G G]chr4:145718354] . PASS SVTYPE=BND;MATEID=r_639_1 TR:VR 52:6 25:0 chr4 145718354 r_639_1 A A]chr4:145696028] . PASS SVTYPE=BND;MATEID=r_639_0 TR:VR 52:6 25:0 chr5 126708587 d_1025 G . Too_small_size END=126708626;SVTYPE=DEL;SVLEN=-39 TR:VR 17:4 17:0 chr7 18625984 r_707 G . PASS END=18632641;SVTYPE=DUP;SVLEN=6657 TR:VR 37:5 24:0 chr8 29290381 d_1139 A . PASS END=29290506;SVTYPE=DEL;SVLEN=-125 TR:VR 23:12 20:0 chr9 110311543 i_727 A . PASS END=110311543;SVTYPE=INS;SVINSLEN=124;SVINSSEQ=TATATATATATATATATATCTCCATACTATATATATATGGATTACTATATTACTATATCCATATATATATGGATATAGTAATAGATATATATATCTCCATACTATATATATATATGGATATAGT TR:VR 28:13 14:0 chrX 138357575 r_844_0 T [chrX:138381372[G . PASS SVTYPE=BND;MATEID=r_844_1 TR:VR 65:21 23:0 chrX 138381372 r_844_1 G [chrX:138357575[G . PASS SVTYPE=BND;MATEID=r_844_0 TR:VR 65:21 23:0 chr1 33114045 r_13_0 T [chr1:35765054[T . PASS SVTYPE=BND;MATEID=r_13_1 TR:VR 65:15 34:0 chr1 35765054 r_13_1 T [chr1:33114045[T . PASS SVTYPE=BND;MATEID=r_13_0 TR:VR 65:15 34:0 chr10 121573169 d_176 T . Too_small_size END=121573211;SVTYPE=DEL;SVLEN=-42 TR:VR 11:7 23:0 chr11 26277003 d_195 C . Too_small_size END=26277045;SVTYPE=DEL;SVLEN=-42 TR:VR 26:4 19:0 chr12 108927094 r_208 C . PASS END=108931022;SVTYPE=DUP;SVLEN=3928 TR:VR 25:3 19:0 chr12 43029180 r_196_0 A A[chr4:47050643[ . PASS SVTYPE=BND;MATEID=r_196_1 TR:VR 84:41 38:0 chr4 47050643 r_196_1 A ]chr12:43029180]A . PASS SVTYPE=BND;MATEID=r_196_0 TR:VR 84:41 38:0 chr13 59728537 r_226 G . PASS END=59816374;SVTYPE=DEL;SVLEN=-87837 TR:VR 46:7 33:0 chr14 50669407 d_303 A . Too_small_size END=50669442;SVTYPE=DEL;SVLEN=-35 TR:VR 22:12 30:0 chr16 48865241 r_308 C . PASS END=48870585;SVTYPE=DUP;SVLEN=5344 TR:VR 54:5 20:0 chr18 65062532 r_378_0 T [chr18:65078547[GT . PASS SVTYPE=BND;MATEID=r_378_1;SVINSLEN=1;SVINSSEQ=G TR:VR 34:13 31:0 chr18 65078547 r_378_1 T [chr18:65062532[CT . PASS SVTYPE=BND;MATEID=r_378_0;SVINSLEN=1;SVINSSEQ=C TR:VR 34:13 31:0 chr19 37855028 r_392_0 T [chr9:18044795[C . PASS SVTYPE=BND;MATEID=r_392_1 TR:VR 69:4 21:0 chr9 18044795 r_392_1 C [chr19:37855028[C . PASS SVTYPE=BND;MATEID=r_392_0 TR:VR 69:4 21:0 chr2 151520124 d_668 T . PASS END=151521405;SVTYPE=DEL;SVLEN=-1281 TR:VR 29:6 23:0 chr22 32213307 d_816 T . PASS END=32213384;SVTYPE=DEL;SVLEN=-77 TR:VR 24:7 15:0 chr3 150097563 d_882 T . PASS END=150097610;SVTYPE=DEL;SVLEN=-47 TR:VR 35:3 15:0 chr3 35644215 d_849 T . PASS END=35649998;SVTYPE=DEL;SVLEN=-5783 TR:VR 32:4 19:0 chr5 13168846 d_984 A . PASS END=13169798;SVTYPE=DEL;SVLEN=-952 TR:VR 24:6 20:0 chr6 74912972 d_1064 A . PASS END=74913044;SVTYPE=DEL;SVLEN=-72;SVINSLEN=1;SVINSSEQ=A TR:VR 27:3 13:0 chr8 116781800 i_685 A . PASS END=116781800;SVTYPE=INS;SVINSLEN=59;SVINSSEQ=GATCAAAAACTTTTGCTTATGTCTGTAATCCCAACATTTTGGTAGGCCAAGGTAGTAGG TR:VR 39:6 16:0 chr9 40879927 i_721 C . PASS END=40879927;SVTYPE=INS;SVINSLEN=75;SVINSSEQ=AGACAGTCTGCAAGCGGACTTTTGGAGTGCTTTGAGGCCTATGGTGAAAAATGAAATATCTTCACATGAAAACTA TR:VR 84:21 30:0 chrX 139087193 d_1384 A . Too_small_size END=139087234;SVTYPE=DEL;SVLEN=-41 TR:VR 40:5 15:0 chrX 90216159 d_1374 A . PASS END=90216471;SVTYPE=DEL;SVLEN=-312 TR:VR 23:4 16:0 chr1 119257490 r_45 G . PASS END=119869105;SVTYPE=DUP;SVLEN=611615 TR:VR 75:9 40:0 chr1 33117836 r_14_0 A A]chr1:35777915] . PASS SVTYPE=BND;MATEID=r_14_1 TR:VR 66:15 43:0 chr1 35777915 r_14_1 C C]chr1:33117836] . PASS SVTYPE=BND;MATEID=r_14_0 TR:VR 66:15 43:0 chr11 26954406 r_142 A . PASS END=26967271;SVTYPE=DUP;SVLEN=12865 TR:VR 48:7 28:0 chr12 109970327 r_209 A . PASS END=109974644;SVTYPE=DUP;SVLEN=4317 TR:VR 28:4 16:0 chr12 49283512 d_237 G . Too_small_size END=49283551;SVTYPE=DEL;SVLEN=-39 TR:VR 15:6 14:0 chr13 62597103 d_264 G . PASS END=62599007;SVTYPE=DEL;SVLEN=-1904 TR:VR 27:4 18:0 chr16 50116113 d_490 G . PASS END=50116163;SVTYPE=DEL;SVLEN=-50 TR:VR 38:10 20:0 chr18 67944999 d_566 T . Too_small_size END=67945041;SVTYPE=DEL;SVLEN=-42;SVINSLEN=6;SVINSSEQ=CAGTTT TR:VR 32:6 17:0 chr2 152474135 r_448 C . PASS END=152492628;SVTYPE=DUP;SVLEN=18493 TR:VR 51:3 15:0 chr22 35455505 d_817 T . Too_small_size END=35455549;SVTYPE=DEL;SVLEN=-44 TR:VR 23:4 23:0 chr4 14946632 r_594_0 T [chr7:105821925[TTATATCT . Too_low_VAF SVTYPE=BND;MATEID=r_594_1;SVINSLEN=7;SVINSSEQ=TTATATC TR:VR 78:3 29:0 chr7 105821925 r_594_1 T [chr4:14946632[GATATAAT . Too_low_VAF SVTYPE=BND;MATEID=r_594_0;SVINSLEN=7;SVINSSEQ=GATATAA TR:VR 78:3 29:0 chr7 19629787 d_1087 T . PASS END=19634196;SVTYPE=DEL;SVLEN=-4409 TR:VR 24:4 13:0 chr8 117358152 d_1164 G . Too_small_size END=117358195;SVTYPE=DEL;SVLEN=-43 TR:VR 29:14 15:0 chr8 39738976 r_745_0 A A]chr8:41556767] . PASS SVTYPE=BND;MATEID=r_745_1 TR:VR 57:5 36:0 chr8 41556767 r_745_1 A A]chr8:39738976] . PASS SVTYPE=BND;MATEID=r_745_0 TR:VR 57:5 36:0 chr9 41479255 d_1220 T . PASS END=41479318;SVTYPE=DEL;SVLEN=-63;SVINSLEN=2;SVINSSEQ=AC TR:VR 27:3 28:0 chr13 63807602 d_265 G . PASS END=63807758;SVTYPE=DEL;SVLEN=-156;SVINSLEN=2;SVINSSEQ=CA TR:VR 31:16 16:0 chr16 50179224 r_309 T . PASS END=50193253;SVTYPE=DUP;SVLEN=14029 TR:VR 48:9 27:0 chr19 39263777 d_602 T . PASS END=39263832;SVTYPE=DEL;SVLEN=-55 TR:VR 30:4 18:0 chr2 1525459 d_616 C . PASS END=1525596;SVTYPE=DEL;SVLEN=-137 TR:VR 34:3 13:0 chr20 29339722 d_724 C . PASS END=29339784;SVTYPE=DEL;SVLEN=-62 TR:VR 48:3 26:0 chr4 153271291 r_641 T . PASS END=153281946;SVTYPE=DUP;SVLEN=10655 TR:VR 35:4 28:0 chr5 133124121 d_1026 T . Too_small_size END=133124156;SVTYPE=DEL;SVLEN=-35 TR:VR 12:7 19:0 chr5 53462190 r_649 A . PASS END=53467388;SVTYPE=DUP;SVLEN=5198 TR:VR 35:8 21:0 chr6 170237697 d_1079 C . PASS END=170237732;SVTYPE=INS;SVINSLEN=35;SVINSSEQ=CTCACTGCAAAGGACAGTGTCGCTTGATCCCACGT TR:VR 34:3 13:0 chr6 76661189 r_689 C . PASS END=81293642;SVTYPE=DEL;SVLEN=-4632453 TR:VR 42:10 31:0 chr7 20016835 r_708_0 A A]chr7:56702750] . PASS SVTYPE=BND;MATEID=r_708_1 TR:VR 59:5 34:0 chr7 56702750 r_708_1 C C]chr7:20016835] . PASS SVTYPE=BND;MATEID=r_708_0 TR:VR 59:5 34:0 chr9 11430348 r_790 A . PASS END=11435021;SVTYPE=DUP;SVLEN=4673 TR:VR 42:3 21:0 chr1 203193345 r_55 G . PASS END=203200959;SVTYPE=DUP;SVLEN=7614 TR:VR 41:3 21:0 chr10 39381252 d_138 T . PASS END=39381363;SVTYPE=INS;SVINSLEN=111;SVINSSEQ=GCAGATTCTAGAAAAAGACCGTTTCCAAACTGCTCAATGAAAAGAAAGGTTCAATTCTGTGAGCTGAATGCACACATCACAAAGGAGTTTCTCAGAAAGCTTGTGTCTAGT TR:VR 84:10 23:0 chr11 3097167 i_99 A . PASS END=3097214;SVTYPE=INS;SVINSLEN=737;SVINSSEQ=CGGGAGGAGGAGGAGAGGGAAAGAGGGGGAAGATGGGAGGGAGGAGAGGAGAGGAAAGACGGGGGGAGGGGACGGGAGGAGGAGGAGAGGAAAGAGGGGGAAGATGGGAGGAGGAGAGGAAAGAGGGGGAAGACGGGAGGAGGAGGAGAGGAAAGAGGGGGAAGATGGGAGGAGGAGAGGAAAGAGGGGAAGATGGGAGGAGGAGAGGAAAGAGGGGGAAGACGGGAGGAGGAGAGGAAAGAGGGGGAAGACGGGAGAAGGAGGAGGAAGAAAGGGGGAAGATGGGGAGGAGGGAGGAGAGGCGGGAGGAAGAGGGGGAAGATGGGAGGAGGAGAAGAGGAAGGGGGAAGGTGGGAGGAGGAGAAGGGAGGGGGAAGACGGGAGGAGGAGAAGAGGAAAGAGGGGGAAGACGGGAAGAGGAGAGGAAAGAGGGGGAAGACGGGAGGAGGAGGAGGAGAGGAAAGAGGGGGAAGATGGGAGGAGGAGGAGAGGAAAGAGGGGGAAGATGGGAGGAGGAGGAGAGGAAGAGGGGGAAGATGGGAGGAGGAGAGGAAAGAGGGGGAAGATGGGAGGAGGAGAAGAGGAAAGAGGGGGAAGATGGGAGGAGGAGAAGAGGAAGAGGGGGAAGACGGGAGGAGGAGGAGAGGAAAGAGAGGGGGAAGACGGGAGGAGGAGGAGAGGAAAGAGGGGGAAGACGGAGGAGGAGGAGAGGATCTGGGGGGGAAGATGAGGAGGAG TR:VR 26:3 16:0 chr13 64138556 r_227 A . PASS END=64158420;SVTYPE=DUP;SVLEN=19864 TR:VR 59:8 28:0 chr16 50337303 r_310 C . PASS END=50341862;SVTYPE=DUP;SVLEN=4559 TR:VR 40:4 19:0 chr18 68333480 r_379 G . PASS END=68339062;SVTYPE=DUP;SVLEN=5582 TR:VR 30:3 26:0 chr2 152684760 d_669 C . Too_small_size END=152684804;SVTYPE=DEL;SVLEN=-44 TR:VR 35:7 21:0 chr22 40318744 d_819 C . PASS END=40318793;SVTYPE=DEL;SVLEN=-49 TR:VR 31:8 15:0 chr5 133337448 r_660 A . PASS END=133343217;SVTYPE=DUP;SVLEN=5769 TR:VR 25:4 23:0 chr5 55715712 d_1013 A . PASS END=55715896;SVTYPE=DEL;SVLEN=-184 TR:VR 10:3 17:0 chr9 117884609 d_1234 T . PASS END=117887921;SVTYPE=DEL;SVLEN=-3312 TR:VR 30:7 20:0 chrUn_KI270442v1 94272 d_1324 G . Too_low_VAF END=94333;SVTYPE=DEL;SVLEN=-61;SVINSLEN=6;SVINSSEQ=GAATGG TR:VR 145:6 90:1 chrX 14083821 r_822_0 T T]chrX:116775488] . PASS SVTYPE=BND;MATEID=r_822_1 TR:VR 46:8 26:0 chrX 116775488 r_822_1 T T]chrX:14083821] . PASS SVTYPE=BND;MATEID=r_822_0 TR:VR 46:8 26:0 chr1 39371136 d_25 T . PASS END=39371183;SVTYPE=DEL;SVLEN=-47 TR:VR 33:18 18:0 chr12 54931896 r_198_0 T ]chr8:137019372]A . PASS SVTYPE=BND;MATEID=r_198_1 TR:VR 48:8 30:0 chr8 137019372 r_198_1 A A[chr12:54931896[ . PASS SVTYPE=BND;MATEID=r_198_0 TR:VR 48:8 30:0 chr13 70793776 d_266 A . PASS END=70795055;SVTYPE=DEL;SVLEN=-1279 TR:VR 23:4 12:0 chr14 55381901 r_245_0 A ]chr9:125043634]T . PASS SVTYPE=BND;MATEID=r_245_1 TR:VR 60:5 43:0 chr9 125043634 r_245_1 T T[chr14:55381901[ . PASS SVTYPE=BND;MATEID=r_245_0 TR:VR 60:5 43:0 chr16 54693646 r_311 T . PASS END=54704390;SVTYPE=DUP;SVLEN=10744 TR:VR 48:4 33:0 chr17_KI270730v1_random 102212 i_287 A . PASS END=102213;SVTYPE=INS;SVINSLEN=356;SVINSSEQ=TGAAATTTGAGCTGAGAATCTGCACTGCACACCATACTGGGTGACAGAGTGAGATTCTGTCGAAAGAAAGGAATGGAATGAAATGGATTTAGAATGGAATGTAATGGAATTTAGTGTAGTGGAGTGGAATGGCGTGGAGTGGAGTGTAGTGGAGTGGAATGGATTGGTGGGGATTGTCATGGAATGAAATGGAATGGAATGGAATGGAGTTGAGTGGAGTGGAGTGGGGTGGAGTGGAGTGGAATGGAGTAGAAAGGTGCAGAATGGAATGGAGTGGAATGGAGTGGAGTGGAGGGGAGTGGAGATGAGTGGAGTGGAATGGAATGGTATGGAGTGGAAGGGAGTAGAATGCAGTG TR:VR 132:17 78:1 chr20 62925608 d_763 T . PASS END=62925831;SVTYPE=DEL;SVLEN=-223 TR:VR 37:7 16:0 chr22 43843174 d_820 G . Too_small_size END=43843212;SVTYPE=DEL;SVLEN=-38 TR:VR 28:3 20:0 chr3 154120843 r_573 C . PASS END=154158205;SVTYPE=DEL;SVLEN=-37362;SVINSLEN=1;SVINSSEQ=G TR:VR 77:7 30:0 chr3 38491962 r_546 C . PASS END=38501868;SVTYPE=DUP;SVLEN=9906 TR:VR 43:16 24:0 chr4 1578151 r_589 C . PASS END=1583649;SVTYPE=DUP;SVLEN=5498 TR:VR 33:3 14:0 chr7 22036736 r_709 A . PASS END=22048206;SVTYPE=DUP;SVLEN=11470 TR:VR 50:7 20:0 chr9 118875248 d_1235 T . PASS END=118875316;SVTYPE=DEL;SVLEN=-68 TR:VR 24:15 22:0 chrX 141753185 r_845 T . PASS END=141756333;SVTYPE=DUP;SVLEN=3148 TR:VR 52:3 16:0 chr1 206419066 r_56 G . PASS END=206422745;SVTYPE=DUP;SVLEN=3679 TR:VR 23:4 22:0 chr1 39986810 r_15 C . PASS END=39994749;SVTYPE=DUP;SVLEN=7939 TR:VR 37:5 28:0 chr10 125546928 d_177 C . PASS END=125546996;SVTYPE=DEL;SVLEN=-68 TR:VR 16:5 23:0 chr10 39382876 d_139 A . PASS END=39382989;SVTYPE=INS;SVINSLEN=113;SVINSSEQ=CAAAGGAGTTTCTCAGAAAGCTTGTGTCTAGTTTTTATGTGAAGATATTTCCTTTCTCACCATAGGCCTCAAAATGCTCACAAATATCCCTTTACAGATTCTACACAAAGACG TR:VR 80:7 21:0 chr15 21111441 i_219 T . PASS END=21111441;SVTYPE=INS;SVINSLEN=210;SVINSSEQ=TGGCCTTGGCTTGGCTGGCTTGGCTGGCTGGTATTGGCTGGTTTGGCTTGGCTGGCTGGGTGGCTTGGCTGGCTTGGCTGGCTTGGCTGTCTTGGCTGGCTAGGGCTGGGCTTGGCTGGCTTGGCTGGCTTGGATGCCTGGCTGGCTTGGCTGGCTTGGCTGGCCTGGCTGGCTGGCTGGCTGGCTTGGCTGGCTTGGGTGGCTTGGCCG TR:VR 93:7 37:1 chr16 55239264 d_491 A . PASS END=55240040;SVTYPE=DEL;SVLEN=-776 TR:VR 26:4 17:0 chr2 153632803 d_670 A . Too_small_size END=153632843;SVTYPE=DEL;SVLEN=-40 TR:VR 25:4 16:0 chr3 154424679 r_574 A . PASS END=154428496;SVTYPE=DUP;SVLEN=3817 TR:VR 51:5 18:0 chr3 42084716 d_851 T . Too_small_size END=42084757;SVTYPE=DEL;SVLEN=-41;SVINSLEN=1;SVINSSEQ=A TR:VR 16:11 14:0 chr4 159594111 i_542 C . PASS END=159594111;SVTYPE=INS;SVINSLEN=1271;SVINSSEQ=AAGAAAACCTGGACATCTCCCTTTCGTACCAACGTGCCCCAGTCTCAAATGATGATCTCTGAAGATGGAGACGTAGTGTACAGCCACACAGTGTGTCTCAAAGTCTGGTTCCCAGACCAGGAGCATCAGCATCACCAGGAACTTAGAAACACAAATCTTTGGGCCGCATTCCAAATCACTGAATCAGAAACTCTGGGGTTGGGGTTCAGCAACCTGTGTTTTGACAAAACCTCCAGGTGATTCAGATGCACCCTCAGGTTTGAGAACCACTAGATTACAAGAAATGGAAATCTGGCAAGTCCGATCAGACATTTCCTCTTAGGCTGTAAGAAGCAAAACCTCTCTTCCCACCCCAGTGTCCTCTCTGCTTGCTCCCTGTCTTCATTCCCTTACACTGGCATCCTCTTCCCTCTCCTCCCTCGTCACCCCTTCCGCCTCACCACACACCAACGAACACCTGTACGGCGTTCAAAGAACTAGAAACCAGCCCCCCATTTCTCCTCTACTTGGAGAATGTATTTTATAACGTGTGCATAGTGCGCAGGCAAGGGGTGGAATTTAAACAATGTCTAATTAAAGAAGACAACACCACACGTTTATCACATTACATTGTTGTGTATTTACCCTTTGCCGCTTTTGATGCATTTGCATATCATCTTTTATAATTCAATTCACTTGCTTAAATCATGTCTTTTATTTTCACTTATTTATCCAGAAGGAAAAGTTCTGCTTCCACCTACCTGCTCCACTGTGTCCTCCACTCATTTCATCTGCTGTGTCTGATGATTCACATCTCTAAAATGCACCTCTTTCTGGAAAGAACACCTCCCCAAGAGGCCTTCTATGAACCACCTGGGCAAATTCCTCTAGGCTCCATCCTTCCCAAGTTCTTGCAAGATTGCATGATACAGGCTACCATTTTTGCATGCACTTAATATTCTTTATGTGCCACGTATGCCCATTTGAGTCTAACACTTTAAGCATAGTTATAGTCTATGGAGTGAAGACGAAGTGAGAAAAATTGTGCAGAGCTTATTTGACAGCCAGAGACTAAGGGGATATTTCTTAAAATTATAGTTTGGGGACTTTGAATATGAGACGTGTGTCAGCTATTAAAGAACAGAGAGTGACAGTGTTTAATTTTATTGCTACAGTGTGTAATAGCTCCAAATTCAGACAGGCTCTTAATTAAAAATGTGCTCCTAGTACCAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA TR:VR 21:8 17:0 chr4 54272969 r_608 G . Too_low_VAF END=54301454;SVTYPE=DEL;SVLEN=-28485 TR:VR 137:5 33:0 chr5 135197456 d_1027 T . PASS END=135203763;SVTYPE=DEL;SVLEN=-6307 TR:VR 29:7 24:0 chr5 60112269 r_650 T . PASS END=60256847;SVTYPE=DEL;SVLEN=-144578 TR:VR 24:3 45:0 chr6 93317755 d_1066 A . PASS END=93318894;SVTYPE=DEL;SVLEN=-1139 TR:VR 25:7 20:0 chr7 23565037 d_1088 C . PASS END=23565099;SVTYPE=DEL;SVLEN=-62 TR:VR 29:8 13:0 chr9 120179375 r_809 T . PASS END=120181668;SVTYPE=DUP;SVLEN=2293 TR:VR 39:4 17:0 chr9 4667200 d_1195 A . PASS END=4667333;SVTYPE=DEL;SVLEN=-133;SVINSLEN=3;SVINSSEQ=AAA TR:VR 48:7 10:0 chr1 125079896 d_56 G . PASS END=125080023;SVTYPE=DEL;SVLEN=-127 TR:VR 64:12 35:0 chr1 207417336 r_57 G . PASS END=207423431;SVTYPE=DUP;SVLEN=6095 TR:VR 28:4 24:0 chr1 40005716 d_26 G . PASS END=40006291;SVTYPE=DEL;SVLEN=-575 TR:VR 23:8 26:0 chr14 59955918 d_306 G . PASS END=59956111;SVTYPE=DEL;SVLEN=-193 TR:VR 36:22 18:0 chr14_GL000225v1_random 26478 d_324 C . Too_low_VAF END=26627;SVTYPE=DEL;SVLEN=-149;SVINSLEN=12;SVINSSEQ=TCAGGTGATGGG TR:VR 139:3 95:0 chr17 4126781 d_503 G . PASS END=4126849;SVTYPE=DEL;SVLEN=-68 TR:VR 21:6 13:0 chr2 153680236 d_671 T . PASS END=153680286;SVTYPE=DEL;SVLEN=-50;SVINSLEN=1;SVINSSEQ=C TR:VR 15:6 21:0 chr2 24042722 d_623 A . PASS END=24042997;SVTYPE=DEL;SVLEN=-275;SVINSLEN=125;SVINSSEQ=AAAAAAAAAAATTAGCTGGCTGTGGTGGCGCATGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGTGGAGGTTGCAGTGAGCCGAGATCGTGCCATGGC TR:VR 23:11 18:0 chr3 4689542 r_533 A . PASS END=4697270;SVTYPE=DUP;SVLEN=7728 TR:VR 49:5 15:0 chr4 160286540 d_964 G . PASS END=160286592;SVTYPE=DEL;SVLEN=-52 TR:VR 9:3 16:0 chr4 54866277 d_945 G . Too_low_VAF END=54868130;SVTYPE=DEL;SVLEN=-1853 TR:VR 79:3 21:0 chr1 125163890 i_16 T . PASS END=125163892;SVTYPE=INS;SVINSLEN=104;SVINSSEQ=CCATTCGTTGATTCCATTCAATATCATTCGATGATGATTCCATTCGTTTCCATCCGATGATGATTCCATTCGATTTCGTTCAATGATTATTCCATTCGAGTCCA TR:VR 50:3 19:0 chr1 209869396 d_93 T . PASS END=209869460;SVTYPE=DEL;SVLEN=-64 TR:VR 20:7 19:0 chr10 39387767 d_141 A . PASS END=39387866;SVTYPE=DEL;SVLEN=-99 TR:VR 68:11 22:0 chr10 76255434 d_169 A . PASS END=76259205;SVTYPE=DEL;SVLEN=-3771 TR:VR 19:3 20:0 chr12 115048224 r_212_0 G G]chr19:55838636] . PASS SVTYPE=BND;MATEID=r_212_1 TR:VR 56:13 29:0 chr19 55838636 r_212_1 T T]chr12:115048224] . PASS SVTYPE=BND;MATEID=r_212_0 TR:VR 56:13 29:0 chr12 5494967 i_126 G . PASS END=5494967;SVTYPE=INS;SVINSLEN=6088;SVINSSEQ=AGAAAAATCGGAAGAACGGGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTGAGGTACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCGAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCGGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGACTCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACACAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACAAAGCTGGATGGAGAATGATTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGACAAGCAAATGTTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCAGTACCAGCCGCTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACCAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAAGAGACACAAAAAACCCTTCAAAACATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTGGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATCGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGGCACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGACAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTGTTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA TR:VR 27:10 15:0 chr13 73164296 r_228 G . PASS END=73179697;SVTYPE=DUP;SVLEN=15401 TR:VR 42:4 35:0 chr15 23194687 r_275_0 T ]chr18:22414801]A . Too_low_VAF SVTYPE=BND;MATEID=r_275_1 TR:VR 85:4 46:0 chr18 22414801 r_275_1 A A[chr15:23194687[ . Too_low_VAF SVTYPE=BND;MATEID=r_275_0 TR:VR 85:4 46:0 chr16 58952580 r_313 T . PASS END=58962336;SVTYPE=DUP;SVLEN=9756 TR:VR 27:7 18:0 chr17 4126975 i_257 A . PASS END=4127008;SVTYPE=INS;SVINSLEN=101;SVINSSEQ=AATAATAATAATTTTAATTGCCATGAGACTAGGGAAAAAGTTAACATGTATAACATTACATAATTAAAGACAACCTGAAGGAGAATGGAGATACACATTTT TR:VR 21:6 13:0 chr19 42693311 r_395 G . PASS END=42698162;SVTYPE=DUP;SVLEN=4851 TR:VR 31:3 13:0 chr2 156424165 r_449 T . PASS END=156441802;SVTYPE=DUP;SVLEN=17637 TR:VR 58:14 25:0 chr3 156957891 d_885 T . PASS END=156958078;SVTYPE=DEL;SVLEN=-187 TR:VR 36:6 15:0 chr3 46965606 r_547 G . PASS END=46968406;SVTYPE=DUP;SVLEN=2800 TR:VR 20:3 19:0 chr4 164177009 i_543 T . Too_small_size END=164177009;SVTYPE=INS;SVINSLEN=39;SVINSSEQ=ATATATATATATATATATATATATATATATATATATACA TR:VR 24:4 18:0 chr4 54952669 r_609_0 A ]chr8:124499130]A . Too_low_VAF SVTYPE=BND;MATEID=r_609_1 TR:VR 145:7 45:0 chr8 124499130 r_609_1 A A[chr4:54952669[ . Too_low_VAF SVTYPE=BND;MATEID=r_609_0 TR:VR 145:7 45:0 chr5 142366063 d_1029 G . Too_small_size END=142366103;SVTYPE=DEL;SVLEN=-40 TR:VR 16:5 17:0 chr1 210653881 r_58 C . PASS END=210654230;SVTYPE=DUP;SVLEN=349;SVINSLEN=9;SVINSSEQ=TGGGAATAG TR:VR 34:9 16:0 chr1 40155046 r_16 A . PASS END=40163058;SVTYPE=DUP;SVLEN=8012 TR:VR 30:4 19:0 chr10 77394708 r_117 C . PASS END=77540665;SVTYPE=DUP;SVLEN=145957 TR:VR 57:11 41:0 chr11 34449666 d_197 A . PASS END=34449799;SVTYPE=DEL;SVLEN=-133 TR:VR 32:6 11:0 chr12 11748902 r_184_0 T T]chr19:40305584] . PASS SVTYPE=BND;MATEID=r_184_1 TR:VR 55:18 33:0 chr19 40305584 r_184_1 T T]chr12:11748902] . PASS SVTYPE=BND;MATEID=r_184_0 TR:VR 55:18 33:0 chr13 75884038 r_229 T . PASS END=75897139;SVTYPE=DUP;SVLEN=13101 TR:VR 42:10 16:0 chr14 71415756 r_248 G . PASS END=71419789;SVTYPE=DUP;SVLEN=4033 TR:VR 24:5 19:0 chr14_GL000225v1_random 27284 d_326 A . Too_low_VAF END=27364;SVTYPE=DEL;SVLEN=-80;SVINSLEN=11;SVINSSEQ=ACTCTGCACTG TR:VR 144:4 102:1 chr16 61737775 r_314_0 G G]chr4:48192894] . PASS SVTYPE=BND;MATEID=r_314_1 TR:VR 88:8 24:0 chr4 48192894 r_314_1 C C]chr16:61737775] . PASS SVTYPE=BND;MATEID=r_314_0 TR:VR 88:8 24:0 chr17 41280437 r_337_0 T [chr22:19877615[A . PASS SVTYPE=BND;MATEID=r_337_1 TR:VR 53:8 39:0 chr22 19877615 r_337_1 A [chr17:41280437[A . PASS SVTYPE=BND;MATEID=r_337_0 TR:VR 53:8 39:0 chr19 43731491 r_396_0 A ]chr21:33599581]C . PASS SVTYPE=BND;MATEID=r_396_1 TR:VR 37:4 40:0 chr21 33599581 r_396_1 C C[chr19:43731491[ . PASS SVTYPE=BND;MATEID=r_396_0 TR:VR 37:4 40:0 chr22 48142587 d_821 A . PASS END=48142674;SVTYPE=DEL;SVLEN=-87 TR:VR 36:3 21:0 chr3 15815465 d_845 T . PASS END=15816037;SVTYPE=DEL;SVLEN=-572 TR:VR 24:19 23:0 chr3 47265053 d_852 T . Too_small_size END=47265091;SVTYPE=DEL;SVLEN=-38 TR:VR 27:17 22:0 chr4 55531130 r_610 C . PASS END=99043990;SVTYPE=DEL;SVLEN=-43512860 TR:VR 109:14 54:0 chr5 144178854 d_1030 G . PASS END=144178943;SVTYPE=DEL;SVLEN=-89 TR:VR 18:5 13:0 chr8 123216607 i_690 A . PASS END=123216633;SVTYPE=INS;SVINSLEN=148;SVINSSEQ=CTGTTTTTTTATTGTTAAAATGACCTTGCATTCCTGCAACCAATACTACTTGATCAAGATTTATTATTTCCTTAAATTGCTGGACTTAATTTGCCAATATTTCCTTAAAGATTTTTGTGTTTACAGTCATGAGGGATATTTGTAGTAC TR:VR 81:55 11:0 chr9 69917523 d_1223 G . PASS END=69917586;SVTYPE=DEL;SVLEN=-63 TR:VR 28:7 19:0 chr1 40430659 r_17_0 G G[chr5:78179570[ . PASS SVTYPE=BND;MATEID=r_17_1 TR:VR 37:10 44:0 chr5 78179570 r_17_1 C ]chr1:40430659]C . PASS SVTYPE=BND;MATEID=r_17_0 TR:VR 37:10 44:0 chr10 789930 r_74 A . Too_low_VAF END=15710944;SVTYPE=DUP;SVLEN=14921014 TR:VR 93:3 37:0 chr12 117909539 r_213_0 C ]chr2:77870063]A . PASS SVTYPE=BND;MATEID=r_213_1 TR:VR 53:4 46:0 chr2 77870063 r_213_1 A A[chr12:117909539[ . PASS SVTYPE=BND;MATEID=r_213_0 TR:VR 53:4 46:0 chr12 58040875 r_199_0 T [chr12:58055276[T . PASS SVTYPE=BND;MATEID=r_199_1 TR:VR 58:10 27:0 chr12 58055276 r_199_1 T [chr12:58040875[T . PASS SVTYPE=BND;MATEID=r_199_0 TR:VR 58:10 27:0 chr13 76923617 r_230 C . PASS END=76932076;SVTYPE=DUP;SVLEN=8459 TR:VR 53:11 20:0 chr14 71507884 i_179 G . PASS END=71507934;SVTYPE=INS;SVINSLEN=201;SVINSSEQ=GGCCTCAAGGCTATGAGTGAGAATACAGAGATGAATAAGATGCTGTTAGGGGCCGGGCGCAGTGGCTCATGCCTGTAATCCTAGCACTTTGGGAAGCCGAGGCGGGCAGATCACCCGAGGTCAGGAGTTCAAGACCAGCTTGGTCAACATGGTGAAACACTGTCTCTACTAAAATACAAAAATTAGCCAGGCGTGGTGGCA TR:VR 20:3 23:0 chr16 65108294 d_492 T . PASS END=65108353;SVTYPE=DEL;SVLEN=-59;SVINSLEN=2;SVINSSEQ=GA TR:VR 25:4 16:0 chr17 43227257 r_338 G . Too_low_VAF END=43262345;SVTYPE=DUP;SVLEN=35088 TR:VR 72:3 34:0 chr2 158522124 d_672 C . PASS END=158522174;SVTYPE=DEL;SVLEN=-50 TR:VR 35:4 15:0 chr3 159074061 d_886 G . PASS END=159076362;SVTYPE=DEL;SVLEN=-2301 TR:VR 32:5 12:0 chr3 4886682 d_843 A . PASS END=4886736;SVTYPE=DEL;SVLEN=-54 TR:VR 36:17 24:0 chr4 1696341 r_590_0 G G]chr7:41418271] . PASS SVTYPE=BND;MATEID=r_590_1 TR:VR 78:6 28:0 chr7 41418271 r_590_1 A A]chr4:1696341] . PASS SVTYPE=BND;MATEID=r_590_0 TR:VR 78:6 28:0 chr4 55575941 r_611_0 T ]chr8:123226743]C . PASS SVTYPE=BND;MATEID=r_611_1 TR:VR 132:9 41:0 chr8 123226743 r_611_1 C C[chr4:55575941[ . PASS SVTYPE=BND;MATEID=r_611_0 TR:VR 132:9 41:0 chr6 18027706 d_1044 A . PASS END=18027771;SVTYPE=DEL;SVLEN=-65 TR:VR 32:12 11:0 chr8 123270335 r_770 G . Too_low_VAF END=123561769;SVTYPE=DEL;SVLEN=-291434 TR:VR 143:5 38:0 chr9 70472639 r_799 A . PASS END=70477729;SVTYPE=DUP;SVLEN=5090 TR:VR 30:6 21:0 chr11 3960341 r_136_0 A A]chr4:166988503] . PASS SVTYPE=BND;MATEID=r_136_1 TR:VR 48:7 31:0 chr4 166988503 r_136_1 T T]chr11:3960341] . PASS SVTYPE=BND;MATEID=r_136_0 TR:VR 48:7 31:0 chr12 120263504 r_214 G . PASS END=120273472;SVTYPE=DUP;SVLEN=9968 TR:VR 38:3 25:0 chr12 58623450 r_200 C . PASS END=58628953;SVTYPE=DUP;SVLEN=5503 TR:VR 43:8 22:0 chr15 29399341 r_276 C . PASS END=32795948;SVTYPE=DEL;SVLEN=-3396607 TR:VR 33:4 39:0 chr16 65739477 r_315 C . PASS END=65741033;SVTYPE=DUP;SVLEN=1556 TR:VR 27:4 20:0 chr19 49050595 r_397 G . PASS END=49199328;SVTYPE=DUP;SVLEN=148733 TR:VR 36:10 35:0 chr2 159233564 r_450_0 T [chr2:159237258[A . PASS SVTYPE=BND;MATEID=r_450_1 TR:VR 50:8 15:0 chr2 159237258 r_450_1 A [chr2:159233564[A . PASS SVTYPE=BND;MATEID=r_450_0 TR:VR 50:8 15:0 chr22 49976989 r_530 G . PASS END=49983541;SVTYPE=DUP;SVLEN=6552 TR:VR 30:4 26:0 chr3 160715541 r_575 T . PASS END=161598113;SVTYPE=DUP;SVLEN=882572 TR:VR 51:8 32:0 chr3 49044028 r_548 A . PASS END=49046956;SVTYPE=DUP;SVLEN=2928 TR:VR 19:3 19:0 chr4 17176082 d_918 G . PASS END=17176257;SVTYPE=DEL;SVLEN=-175 TR:VR 16:4 15:0 chr4 55770441 d_946 C . Too_small_size END=55770481;SVTYPE=DEL;SVLEN=-40 TR:VR 26:4 17:0 chr5 144834937 d_1031 C . PASS END=144847793;SVTYPE=DEL;SVLEN=-12856;SVINSLEN=35;SVINSSEQ=GTTTTTACAAACTGCTGATTGGTGCTTTTACAAAT TR:VR 28:7 24:0 chr5 6714391 d_981 C . PASS END=6714517;SVTYPE=DEL;SVLEN=-126 TR:VR 19:3 16:0 chr7 342275 r_702_0 T T]chr7:346618] . PASS SVTYPE=BND;MATEID=r_702_1 TR:VR 18:4 28:0 chr7 346618 r_702_1 C C]chr7:342275] . PASS SVTYPE=BND;MATEID=r_702_0 TR:VR 18:4 28:0 chr8 123579991 r_771 G . PASS END=123600460;SVTYPE=DUP;SVLEN=20469 TR:VR 227:75 33:0 chr9 124013728 d_1238 C . Too_small_size END=124013770;SVTYPE=DEL;SVLEN=-42 TR:VR 36:4 20:0 chr10 39534755 d_144 T . Too_low_VAF END=39535095;SVTYPE=DEL;SVLEN=-340;SVINSLEN=1;SVINSSEQ=C TR:VR 73:3 22:0 chr10 8363371 d_122 C . PASS END=8363445;SVTYPE=DEL;SVLEN=-74 TR:VR 55:17 23:0 chr12 120474053 r_215_0 G [chr17:28961530[C . PASS SVTYPE=BND;MATEID=r_215_1 TR:VR 43:4 34:0 chr17 28961530 r_215_1 C [chr12:120474053[C . PASS SVTYPE=BND;MATEID=r_215_0 TR:VR 43:4 34:0 chr12 61317254 r_201_0 A A[chr21:44010892[ . PASS SVTYPE=BND;MATEID=r_201_1 TR:VR 47:5 46:0 chr21 44010892 r_201_1 G ]chr12:61317254]G . PASS SVTYPE=BND;MATEID=r_201_0 TR:VR 47:5 46:0 chr14 87767946 r_249_0 T ]chr8:128479718]A . PASS SVTYPE=BND;MATEID=r_249_1 TR:VR 112:37 29:0 chr8 128479718 r_249_1 A A[chr14:87767946[ . PASS SVTYPE=BND;MATEID=r_249_0 TR:VR 112:37 29:0 chr15 29959759 r_277 A . PASS END=46428616;SVTYPE=DUP;SVLEN=16468857 TR:VR 61:6 33:0 chr16 68149922 r_316 A . PASS END=68154224;SVTYPE=DUP;SVLEN=4302 TR:VR 22:3 19:0 chr2 159245392 r_451_0 G G]chr20:63412301] . PASS SVTYPE=BND;MATEID=r_451_1 TR:VR 60:5 21:0 chr20 63412301 r_451_1 G G]chr2:159245392] . PASS SVTYPE=BND;MATEID=r_451_0 TR:VR 60:5 21:0 chr22 50267157 r_531 G . PASS END=50271988;SVTYPE=DUP;SVLEN=4831 TR:VR 24:3 24:0 chr3 164820676 d_887 A . PASS END=164820724;SVTYPE=DEL;SVLEN=-48 TR:VR 19:6 20:0 chr3 51124186 d_853 A . PASS END=51124639;SVTYPE=DEL;SVLEN=-453 TR:VR 34:17 15:0 chr4 56135247 r_612 T . PASS END=99613705;SVTYPE=DUP;SVLEN=43478458 TR:VR 70:11 40:0 chr5 157149043 r_662 A . PASS END=157272493;SVTYPE=DEL;SVLEN=-123450 TR:VR 34:18 33:0 chr5 6715555 d_982 T . PASS END=6715653;SVTYPE=DEL;SVLEN=-98 TR:VR 17:3 16:0 chr6 21081763 r_675 A . PASS END=21159339;SVTYPE=DUP;SVLEN=77576 TR:VR 64:7 36:0 chr9 73701028 r_800 T . PASS END=73703049;SVTYPE=DUP;SVLEN=2021 TR:VR 18:6 24:0 chrX 144922981 d_1389 T . PASS END=144923036;SVTYPE=DEL;SVLEN=-55 TR:VR 36:3 18:0 chr1 1369392 r_0 T . PASS END=1390811;SVTYPE=DUP;SVLEN=21419;SVINSLEN=1;SVINSSEQ=G TR:VR 54:13 32:0 chr10 131086382 d_178 T . Too_small_size END=131086421;SVTYPE=DEL;SVLEN=-39 TR:VR 12:3 15:0 chr10 39535041 r_108_0 C [chr10:39543179[TGAAGATATCCCGTTTCCAACGAACACCTCTAAGCGGTCCAAATATACGCTAGCAAATTCAGCAAAAAGAGTGTTTCAAAACTGCTCTATGAAAAGAAAGGTTCACCTCTGTGAGTTGAATGCACACATCTCTTGTGATAGAGCAGTTTTGAAACACTCTTTTTGTAGACTCTGCAAGTGGACATTAGGAGGGCTTTGAGTCTAATGGAGAAAAACGAAATCTCTTCACATAAAAACTACACAGAAGCATTATC . PASS SVTYPE=BND;MATEID=r_108_1;SVINSLEN=253;SVINSSEQ=TGAAGATATCCCGTTTCCAACGAACACCTCTAAGCGGTCCAAATATACGCTAGCAAATTCAGCAAAAAGAGTGTTTCAAAACTGCTCTATGAAAAGAAAGGTTCACCTCTGTGAGTTGAATGCACACATCTCTTGTGATAGAGCAGTTTTGAAACACTCTTTTTGTAGACTCTGCAAGTGGACATTAGGAGGGCTTTGAGTCTAATGGAGAAAAACGAAATCTCTTCACATAAAAACTACACAGAAGCATTAT TR:VR 100:7 33:0 chr10 39543179 r_108_1 C [chr10:39535041[ATAATGCTTCTGTGTAGTTTTTATGTGAAGAGATTTCGTTTTTCTCCATTAGACTCAAAGCCCTCCTAATGTCCACTTGCAGAGTCTACAAAAAGAGTGTTTCAAAACTGCTCTATCACAAGAGATGTGTGCATTCAACTCACAGAGGTGAACCTTTCTTTTCATAGAGCAGTTTTGAAACACTCTTTTTGCTGAATTTGCTAGCGTATATTTGGACCGCTTAGAGGTGTTCGTTGGAAACGGGATATCTTCAC . PASS SVTYPE=BND;MATEID=r_108_0;SVINSLEN=253;SVINSSEQ=ATAATGCTTCTGTGTAGTTTTTATGTGAAGAGATTTCGTTTTTCTCCATTAGACTCAAAGCCCTCCTAATGTCCACTTGCAGAGTCTACAAAAAGAGTGTTTCAAAACTGCTCTATCACAAGAGATGTGTGCATTCAACTCACAGAGGTGAACCTTTCTTTTCATAGAGCAGTTTTGAAACACTCTTTTTGCTGAATTTGCTAGCGTATATTTGGACCGCTTAGAGGTGTTCGTTGGAAACGGGATATCTTCA TR:VR 100:7 33:0 chr10 84509930 d_170 G . PASS END=84511644;SVTYPE=DEL;SVLEN=-1714 TR:VR 21:3 18:0 chr11 45882808 r_144 A . PASS END=45889100;SVTYPE=DUP;SVLEN=6292 TR:VR 41:7 16:0 chr12 121444969 d_244 G . Too_small_size END=121445007;SVTYPE=DEL;SVLEN=-38 TR:VR 19:9 19:0 chr12 62652516 d_239 A . Too_small_size END=62652553;SVTYPE=DEL;SVLEN=-37 TR:VR 17:7 18:0 chr13 81646395 d_269 G . Too_small_size END=81646434;SVTYPE=DEL;SVLEN=-39 TR:VR 17:6 20:0 chr14 87771983 r_250_0 T T[chr8:128475226[ . Too_low_VAF SVTYPE=BND;MATEID=r_250_1 TR:VR 133:5 31:0 chr8 128475226 r_250_1 C ]chr14:87771983]C . Too_low_VAF SVTYPE=BND;MATEID=r_250_0 TR:VR 133:5 31:0 chr15 42264667 r_278 C . PASS END=42306743;SVTYPE=DEL;SVLEN=-42076 TR:VR 61:4 43:0 chr2 160433362 d_673 C . PASS END=160434454;SVTYPE=DEL;SVLEN=-1092;SVINSLEN=2;SVINSSEQ=TC TR:VR 39:9 13:0 chr3 5182940 i_492 C . PASS END=5182943;SVTYPE=INS;SVINSLEN=72;SVINSSEQ=ACTTCTTTTTTCTTTTTTCTTCTTCTCTTCTTCTTCCTTTTTTTTCTTTTGTTTCTTTGGAAAGGGTCTTGC TR:VR 40:3 20:0 chr5 157899505 d_1032 A . PASS END=157900532;SVTYPE=DEL;SVLEN=-1027 TR:VR 16:3 15:0 chr6 21853040 r_676 T . PASS END=21883919;SVTYPE=DUP;SVLEN=30879 TR:VR 72:11 35:0 chr9 124549110 r_812 C . PASS END=124556457;SVTYPE=DUP;SVLEN=7347 TR:VR 38:4 18:0 chr9 7534363 d_1196 A . PASS END=7534413;SVTYPE=DEL;SVLEN=-50 TR:VR 60:8 13:0 chr10 131587904 r_129 A . PASS END=131589824;SVTYPE=DUP;SVLEN=1920 TR:VR 19:4 23:0 chr10 84939056 r_118_0 C [chr6:50815733[A . PASS SVTYPE=BND;MATEID=r_118_1 TR:VR 39:9 28:0 chr6 50815733 r_118_1 A [chr10:84939056[A . PASS SVTYPE=BND;MATEID=r_118_0 TR:VR 39:9 28:0 chr11 48916640 i_105 C . PASS END=48916640;SVTYPE=INS;SVINSLEN=578;SVINSSEQ=TGCTATAAAGACACATGCACACGTATGTTTATTGCGGCATTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGGAAATGTGGCACATATACACCATGGCATACTAAGCAGCCATAAAAAATGATGAGTCCATGTCGTTTGTAGGGACATGGATGAAATTCGAAATCATCATTCTCAGTAATCTATCGCAAGAACAAAAAACCAAACACTGCATATTCTCACTCATAGGTGGGAACTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTTGTGGGGTGGTGGGAGGGGGGAGGGATAGCATCGGGAGATATACCTAATGCTAGATGACGAGTTAGTAGGTGCAGCGCACCAGCATGGCACATGTATACATATATAACTAACCTGCACAATGTGCACATGTACGCTAAAACTTAAAGTATAATAAAAAAAAAAAAAAAAAGAAAAAAAAAAAGAATGCAACAACAAAAAAAAAGAGTGTCTCAAAACTGCTCTATCAAAAGGCAGGTTCAACTCCGTGAGTTGATTGAA TR:VR 39:6 18:0 chr12 6554007 d_225 C . Too_small_size END=6554048;SVTYPE=DEL;SVLEN=-41 TR:VR 22:18 16:0 chr14 88286823 d_307 G . PASS END=88288550;SVTYPE=DEL;SVLEN=-1727 TR:VR 43:3 15:0 chr16 68951780 r_317 T . PASS END=68958968;SVTYPE=DUP;SVLEN=7188 TR:VR 28:4 26:0 chr2 160435062 d_674 T . PASS END=160435203;SVTYPE=DEL;SVLEN=-141 TR:VR 35:8 11:0 chr3 171232431 d_888 A . PASS END=171232488;SVTYPE=DEL;SVLEN=-57;SVINSLEN=1;SVINSSEQ=A TR:VR 22:11 16:0 chr3 51846434 r_549 T . PASS END=51854588;SVTYPE=DUP;SVLEN=8154 TR:VR 72:6 18:0 chr4 180956692 d_965 T . PASS END=180956754;SVTYPE=DEL;SVLEN=-62;SVINSLEN=8;SVINSSEQ=GGTTACTG TR:VR 17:8 19:0 chr5 165261180 d_1033 T . PASS END=165261619;SVTYPE=DEL;SVLEN=-439 TR:VR 24:5 15:0 chr7 35618192 r_711 T . PASS END=35661804;SVTYPE=DEL;SVLEN=-43612 TR:VR 32:3 31:0 chrX 146388210 d_1390 G . PASS END=146389607;SVTYPE=DEL;SVLEN=-1397 TR:VR 35:13 21:0 chr1 44316794 r_18 A . PASS END=44325440;SVTYPE=DUP;SVLEN=8646 TR:VR 40:9 21:0 chr10 84945320 r_119_0 C C]chr6:50823229] . PASS SVTYPE=BND;MATEID=r_119_1 TR:VR 50:14 28:0 chr6 50823229 r_119_1 G G]chr10:84945320] . PASS SVTYPE=BND;MATEID=r_119_0 TR:VR 50:14 28:0 chr16 69855928 r_318 T . PASS END=70276744;SVTYPE=DUP;SVLEN=420816 TR:VR 56:7 31:0 chr17 43390148 r_341 G . PASS END=43403111;SVTYPE=DUP;SVLEN=12963 TR:VR 35:6 26:0 chr19 54171040 d_607 T . PASS END=54173505;SVTYPE=DEL;SVLEN=-2465 TR:VR 17:3 27:0 chr2 161895025 r_452 T . PASS END=161898400;SVTYPE=DUP;SVLEN=3375 TR:VR 41:5 22:0 chr20 63844915 d_766 C . PASS END=63844969;SVTYPE=DEL;SVLEN=-54 TR:VR 31:13 19:0 chr3 172339049 r_577 T . PASS END=173044226;SVTYPE=DUP;SVLEN=705177 TR:VR 49:7 27:0 chr3 51857063 r_550_0 A ATCCGAACATCAGAAGGAACAAACTCCAGACACACCATCTTTAAGAACTGTAACATTCACTGCAAGGGTCCGTGGCTTCACTCTTGAAGTCAGTGAGACCAAGAACCCACCAATTCTGGACATA[chr4:103456373[ . PASS SVTYPE=BND;MATEID=r_550_1;SVINSLEN=123;SVINSSEQ=TCCGAACATCAGAAGGAACAAACTCCAGACACACCATCTTTAAGAACTGTAACATTCACTGCAAGGGTCCGTGGCTTCACTCTTGAAGTCAGTGAGACCAAGAACCCACCAATTCTGGACATA TR:VR 85:17 35:1 chr4 103456373 r_550_1 A ]chr3:51857063]TATGTCCAGAATTGGTGGGTTCTTGGTCTCACTGACTTCAAGAGTGAAGCCACGGACCCTTGCAGTGAATGTTACAGTTCTTAAAGATGGTGTGTCTGGAGTTTGTTCCTTCTGATGTTCGGAA . PASS SVTYPE=BND;MATEID=r_550_0;SVINSLEN=123;SVINSSEQ=TATGTCCAGAATTGGTGGGTTCTTGGTCTCACTGACTTCAAGAGTGAAGCCACGGACCCTTGCAGTGAATGTTACAGTTCTTAAAGATGGTGTGTCTGGAGTTTGTTCCTTCTGATGTTCGGA TR:VR 85:17 35:1 chr4 57089436 r_613 G . PASS END=112487209;SVTYPE=DEL;SVLEN=-55397773 TR:VR 65:15 39:0 chr5 78178823 r_652 T . PASS END=78180151;SVTYPE=DUP;SVLEN=1328 TR:VR 29:10 26:0 chr6 25813042 r_677 G . PASS END=25820599;SVTYPE=DUP;SVLEN=7557 TR:VR 40:3 26:0 chr7 38118393 r_712 A . PASS END=42679486;SVTYPE=DEL;SVLEN=-4561093 TR:VR 52:4 38:0 chr9 76936490 r_801 T . PASS END=76943806;SVTYPE=DUP;SVLEN=7316 TR:VR 20:3 25:0 chr14 89657883 r_251 C . PASS END=89661715;SVTYPE=DUP;SVLEN=3832 TR:VR 58:7 16:0 chr14_GL000225v1_random 33415 d_331 C . Too_low_VAF END=33760;SVTYPE=DEL;SVLEN=-345;SVINSLEN=73;SVINSSEQ=AAAATCCCCATCACGTGGATGATCAGTGCAAAGTTATGTCACAAAGACCCTTTAGGCAGATCCTAGACAAGAT TR:VR 379:10 338:1 chr17 43507327 d_515 T . PASS END=43507387;SVTYPE=DEL;SVLEN=-60 TR:VR 15:4 14:0 chr2 162475740 r_453 A . PASS END=162484178;SVTYPE=DUP;SVLEN=8438 TR:VR 45:8 25:0 chr3 174784363 d_889 A . Too_small_size END=174784407;SVTYPE=DEL;SVLEN=-44 TR:VR 23:7 27:0 chr5 173771493 r_663_0 A A]chr5:178325913] . PASS SVTYPE=BND;MATEID=r_663_1 TR:VR 41:8 30:0 chr5 178325913 r_663_1 C C]chr5:173771493] . PASS SVTYPE=BND;MATEID=r_663_0 TR:VR 41:8 30:0 chr6 27852729 r_678 C . PASS END=27867063;SVTYPE=DUP;SVLEN=14334 TR:VR 49:4 27:0 chr7 40918413 d_1093 A . PASS END=40918480;SVTYPE=DEL;SVLEN=-67 TR:VR 27:4 18:0 chr8 125929646 d_1167 T . Too_small_size;Too_low_VAF END=125929681;SVTYPE=DEL;SVLEN=-35 TR:VR 85:3 16:0 chr9 12957599 d_1199 A . Too_small_size END=12957644;SVTYPE=DEL;SVLEN=-45 TR:VR 31:5 19:0 chrX 148171890 d_1391 T . PASS END=148172121;SVTYPE=DEL;SVLEN=-231 TR:VR 50:4 15:0 chrY 11326503 d_1405 A . Too_low_VAF END=11327252;SVTYPE=DEL;SVLEN=-749 TR:VR 359:3 309:1 chr1 214160476 r_62 G . PASS END=214169100;SVTYPE=DUP;SVLEN=8624 TR:VR 41:3 25:0 chr10 39543627 d_148 T . PASS END=39543737;SVTYPE=INS;SVINSLEN=111;SVINSSEQ=AGAATCTGCAAGTGGACATTTGGAGCGCTTTGAGATCTTTAGTGAAAAAGGAAATATCTTCACATAAAAACTGGATGGAAGCATTTACAGAAACTTCTTTGTGACGAGTGC TR:VR 78:7 30:0 chr10 8717098 r_79 T . PASS END=8724138;SVTYPE=DUP;SVLEN=7040 TR:VR 93:5 23:0 chr12 86136382 r_203 A . PASS END=86137137;SVTYPE=DEL;SVLEN=-755 TR:VR 21:6 26:0 chr16 72250510 r_320 T . PASS END=72260779;SVTYPE=DUP;SVLEN=10269;SVINSLEN=12;SVINSSEQ=TTTTTTAGCATG TR:VR 40:3 19:0 chr18 12202408 r_361_0 T ]chr2:6658156]TTTTTTTTTTTTTTTTTTT . PASS SVTYPE=BND;MATEID=r_361_1;SVINSLEN=18;SVINSSEQ=TTTTTTTTTTTTTTTTTT TR:VR 68:5 44:0 chr2 6658156 r_361_1 T TAAAAAAAAAAAAAAAAAA[chr18:12202408[ . PASS SVTYPE=BND;MATEID=r_361_0;SVINSLEN=18;SVINSSEQ=AAAAAAAAAAAAAAAAAA TR:VR 68:5 44:0 chr19 54596580 d_608 G . PASS END=54596891;SVTYPE=DEL;SVLEN=-311 TR:VR 28:3 15:0 chr2 162820388 d_675 T . PASS END=162820559;SVTYPE=DEL;SVLEN=-171 TR:VR 22:4 14:0 chr20 31061836 d_736 A . Too_low_VAF END=31062687;SVTYPE=DEL;SVLEN=-851 TR:VR 782:7 336:1 chr21 7957242 d_772 C . Too_low_VAF END=7957340;SVTYPE=DEL;SVLEN=-98;SVINSLEN=3;SVINSSEQ=GCT TR:VR 408:9 293:1 chr3 175765872 d_890 A . PASS END=175766076;SVTYPE=DEL;SVLEN=-204 TR:VR 41:4 16:0 chr4 181617225 d_966 A . PASS END=181617402;SVTYPE=DEL;SVLEN=-177 TR:VR 14:8 21:0 chr5 173771503 r_664_0 A [chr5:178324771[G . PASS SVTYPE=BND;MATEID=r_664_1 TR:VR 41:9 28:0 chr5 178324771 r_664_1 G [chr5:173771503[G . PASS SVTYPE=BND;MATEID=r_664_0 TR:VR 41:9 28:0 chr5 78698204 r_653 A . PASS END=78739870;SVTYPE=DUP;SVLEN=41666 TR:VR 47:4 35:0 chr7 41189744 r_713 A . PASS END=41206205;SVTYPE=DUP;SVLEN=16461;SVINSLEN=12;SVINSSEQ=TAAAATAATAAT TR:VR 52:6 17:0 chr8 126215726 d_1168 T . PASS END=126215836;SVTYPE=DEL;SVLEN=-110 TR:VR 78:8 16:0 chr9 13346218 r_791 T . PASS END=14146735;SVTYPE=DUP;SVLEN=800517;SVINSLEN=5;SVINSSEQ=CCAGC TR:VR 85:13 30:0 chr9 793049 d_1189 A . Too_small_size END=793091;SVTYPE=DEL;SVLEN=-42 TR:VR 59:6 21:0 chr10 39545343 r_109_0 G GACATTTAGAGTGCCTTGAGGCCTATAGTGAAAAAGGGAATATCTTCACATAAAAACTACACAGAAGTATTCTCAGAAACTTATTTGTGATGCTTGCATTCAACTCACAGTGTTGAACCTTTCCTTTG[chr4:145690221[ . PASS SVTYPE=BND;MATEID=r_109_1;SVINSLEN=127;SVINSSEQ=ACATTTAGAGTGCCTTGAGGCCTATAGTGAAAAAGGGAATATCTTCACATAAAAACTACACAGAAGTATTCTCAGAAACTTATTTGTGATGCTTGCATTCAACTCACAGTGTTGAACCTTTCCTTTG TR:VR 99:8 45:0 chr4 145690221 r_109_1 A ]chr10:39545343]CAAAGGAAAGGTTCAACACTGTGAGTTGAATGCAAGCATCACAAATAAGTTTCTGAGAATACTTCTGTGTAGTTTTTATGTGAAGATATTCCCTTTTTCACTATAGGCCTCAAGGCACTCTAAATGTA . PASS SVTYPE=BND;MATEID=r_109_0;SVINSLEN=127;SVINSSEQ=CAAAGGAAAGGTTCAACACTGTGAGTTGAATGCAAGCATCACAAATAAGTTTCTGAGAATACTTCTGTGTAGTTTTTATGTGAAGATATTCCCTTTTTCACTATAGGCCTCAAGGCACTCTAAATGT TR:VR 99:8 45:0 chr10 87952850 r_120 T . PASS END=87963879;SVTYPE=DUP;SVLEN=11029 TR:VR 43:4 32:0 chr12 88735 r_180_0 G [chr21:33768887[CCTCAAGTTGTAC . PASS SVTYPE=BND;MATEID=r_180_1;SVINSLEN=12;SVINSSEQ=CCTCAAGTTGTA TR:VR 51:5 35:0 chr21 33768887 r_180_1 C [chr12:88735[TACAACTTGAGGC . PASS SVTYPE=BND;MATEID=r_180_0;SVINSLEN=12;SVINSSEQ=TACAACTTGAGG TR:VR 51:5 35:0 chr13 88083393 d_271 G . Too_small_size END=88083437;SVTYPE=DEL;SVLEN=-44 TR:VR 24:16 23:0 chr19 54707607 d_609 C . PASS END=54707812;SVTYPE=DEL;SVLEN=-205 TR:VR 26:9 17:0 chr2 28394144 r_405 C . PASS END=28406819;SVTYPE=DUP;SVLEN=12675 TR:VR 43:7 30:0 chr4 62425690 d_947 G . PASS END=62426151;SVTYPE=DEL;SVLEN=-461 TR:VR 30:11 25:0 chr5 173771828 r_665 G . PASS END=178326425;SVTYPE=DEL;SVLEN=-4554597 TR:VR 44:9 30:0 chr5 79831119 r_654 C . PASS END=79835400;SVTYPE=DUP;SVLEN=4281 TR:VR 30:5 19:0 chr6 29978080 d_1046 A . PASS END=29978764;SVTYPE=DEL;SVLEN=-684;SVINSLEN=4;SVINSSEQ=TTAT TR:VR 32:3 24:0 chr7 41292364 r_714 A . PASS END=41492867;SVTYPE=DUP;SVLEN=200503 TR:VR 68:14 35:0 chr8 127435720 d_1169 G . PASS END=127435774;SVTYPE=DEL;SVLEN=-54 TR:VR 72:5 22:0 chr9 133529605 r_813 G . PASS END=133547603;SVTYPE=DEL;SVLEN=-17998 TR:VR 44:9 34:0 chrX 150067279 r_848 T . PASS END=150078513;SVTYPE=DUP;SVLEN=11234 TR:VR 67:4 31:0 chr1 218571109 d_95 A . PASS END=218572341;SVTYPE=DEL;SVLEN=-1232 TR:VR 25:6 25:0 chr1 4611847 r_3_0 A [chr3:71519066[T . PASS SVTYPE=BND;MATEID=r_3_1 TR:VR 41:4 23:0 chr3 71519066 r_3_1 T [chr1:4611847[T . PASS SVTYPE=BND;MATEID=r_3_0 TR:VR 41:4 23:0 chr10 88140636 r_121 A . PASS END=93461432;SVTYPE=DEL;SVLEN=-5320796 TR:VR 28:7 36:0 chr12 92073511 r_204 A . PASS END=92085455;SVTYPE=DUP;SVLEN=11944 TR:VR 39:8 22:0 chr13 91972114 r_232 G . PASS END=91991120;SVTYPE=DUP;SVLEN=19006 TR:VR 39:3 26:0 chr15 42704976 r_279_0 G [chr15:42719348[C . PASS SVTYPE=BND;MATEID=r_279_1 TR:VR 63:5 21:0 chr15 42719348 r_279_1 C [chr15:42704976[C . PASS SVTYPE=BND;MATEID=r_279_0 TR:VR 63:5 21:0 chr16 77524930 r_322 T . PASS END=78354769;SVTYPE=DUP;SVLEN=829839 TR:VR 47:10 44:0 chr17 46127321 r_343 G . PASS END=46148351;SVTYPE=DEL;SVLEN=-21030 TR:VR 40:13 40:0 chr18 1522762 r_357 C . PASS END=1526098;SVTYPE=DUP;SVLEN=3336 TR:VR 42:3 20:0 chr2 30966928 r_406_0 T TACATCTGGGGTAATTTCAATTTTCACTTT]chr2:53292548] . PASS SVTYPE=BND;MATEID=r_406_1;SVINSLEN=29;SVINSSEQ=ACATCTGGGGTAATTTCAATTTTCACTTT TR:VR 39:4 27:0 chr2 53292548 r_406_1 C CAAAGTGAAAATTGAAATTACCCCAGATGT]chr2:30966928] . PASS SVTYPE=BND;MATEID=r_406_0;SVINSLEN=29;SVINSSEQ=AAAGTGAAAATTGAAATTACCCCAGATGT TR:VR 39:4 27:0 chr2 91695730 r_430_0 G [chr2:176348999[T . PASS SVTYPE=BND;MATEID=r_430_1 TR:VR 56:14 43:0 chr2 176348999 r_430_1 T [chr2:91695730[T . PASS SVTYPE=BND;MATEID=r_430_0 TR:VR 56:14 43:0 chr5 17395389 d_985 T . PASS END=17395488;SVTYPE=DEL;SVLEN=-99 TR:VR 24:6 20:0 chr5 80080683 i_566 T . PASS END=80080683;SVTYPE=INS;SVINSLEN=146;SVINSSEQ=TATGAACATACATTTCAAACATATACCTCAACCTTTTCAGTGGTTACACTTTTTTTTTTTTTTTTTGAGACAGGGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCATGATTATGGCTCACTGCAGCCTCAACCTCCTGGGCT TR:VR 16:6 13:0 chr6 30731172 d_1047 T . PASS END=30731442;SVTYPE=DEL;SVLEN=-270 TR:VR 38:4 21:0 chr7 103060225 r_729 A . PASS END=103087111;SVTYPE=DUP;SVLEN=26886;SVINSLEN=3;SVINSSEQ=AAC TR:VR 90:8 22:0 chr8 127532338 r_772 T . Too_low_VAF END=127886190;SVTYPE=DUP;SVLEN=353852 TR:VR 156:5 45:0 chr1 47147997 d_32 T . PASS END=47148177;SVTYPE=DEL;SVLEN=-180 TR:VR 31:19 21:0 chr10 13347379 r_84 C . PASS END=13354150;SVTYPE=DUP;SVLEN=6771 TR:VR 76:6 19:0 chr10 93383425 d_171 T . Too_small_size END=93383463;SVTYPE=DEL;SVLEN=-38 TR:VR 14:5 20:0 chr12 92479295 d_241 A . Too_small_size END=92479340;SVTYPE=DEL;SVLEN=-45 TR:VR 20:5 19:0 chr14 90764009 r_252 T . PASS END=90770246;SVTYPE=DUP;SVLEN=6237 TR:VR 84:21 20:0 chr15 42727936 r_280_0 C C]chr7:40976814] . PASS SVTYPE=BND;MATEID=r_280_1 TR:VR 55:8 31:0 chr7 40976814 r_280_1 G G]chr15:42727936] . PASS SVTYPE=BND;MATEID=r_280_0 TR:VR 55:8 31:0 chr19 55007248 d_611 C . Too_small_size END=55007285;SVTYPE=DEL;SVLEN=-37 TR:VR 24:11 16:0 chr2 30966944 r_407_0 A [chr2:53292614[G . PASS SVTYPE=BND;MATEID=r_407_1 TR:VR 41:4 27:0 chr2 53292614 r_407_1 G [chr2:30966944[G . PASS SVTYPE=BND;MATEID=r_407_0 TR:VR 41:4 27:0 chr22_KI270735v1_random 1794 d_828 T . PASS END=1868;SVTYPE=DEL;SVLEN=-74;SVINSLEN=1;SVINSSEQ=A TR:VR 50:3 37:0 chr3 18213588 r_540_0 G [chrX:155303240[C . PASS SVTYPE=BND;MATEID=r_540_1 TR:VR 73:20 37:0 chrX 155303240 r_540_1 C [chr3:18213588[C . PASS SVTYPE=BND;MATEID=r_540_0 TR:VR 73:20 37:0 chr3 58790164 r_551 T . PASS END=60007668;SVTYPE=DUP;SVLEN=1217504 TR:VR 47:12 22:0 chr5 80644611 d_1019 T . PASS END=80644781;SVTYPE=DEL;SVLEN=-170 TR:VR 22:11 21:0 chr7 47709202 d_1095 T . PASS END=47709253;SVTYPE=DEL;SVLEN=-51 TR:VR 17:3 21:0 chr8 127653135 r_773 C . PASS END=127759516;SVTYPE=DUP;SVLEN=106381 TR:VR 251:59 33:0 chr8 43239524 i_677 T . Too_low_VAF END=43239525;SVTYPE=INS;SVINSLEN=349;SVINSSEQ=TTGGGTACTTTGATATTTTATGTACAGTATATAATACATACTTTGGGTACTTTGATATTTTATGTACAGTATGTAAAATATACTTTGGGTAGTTTGATATATTATGTACAGTATATAATACATACTTTGGGTACTTTGATATTTTATGTACAGTGTATAATACATACATGTACTTTGATATTTTATGTACAGTGTATAATACATACTTTGGTGTACTTTGATATTTTATGTACATAAAATATCAAAGTACCCAAACATATATTATATACTGTACATAAAATATCAAAGTACTCAAACTATATATTATATACTGTACATAAAATATCAAAGTACGAAAGGTATATATTCT TR:VR 298:6 138:0 chr9 834303 r_781 G . PASS END=838254;SVTYPE=DEL;SVLEN=-3951 TR:VR 63:4 18:0 chr10 133685736 r_130_0 G [chr18:21056296[GAAA . Too_low_VAF SVTYPE=BND;MATEID=r_130_1;SVINSLEN=3;SVINSSEQ=GAA TR:VR 197:5 120:0 chr18 21056296 r_130_1 A [chr10:133685736[TTCA . Too_low_VAF SVTYPE=BND;MATEID=r_130_0;SVINSLEN=3;SVINSSEQ=TTC TR:VR 197:5 120:0 chr14 91449277 r_253 T . PASS END=91461911;SVTYPE=DUP;SVLEN=12634 TR:VR 96:6 23:0 chr15 50639063 d_396 A . Too_small_size END=50639100;SVTYPE=DEL;SVLEN=-37 TR:VR 23:7 13:0 chr16 81143458 d_493 T . PASS END=81143631;SVTYPE=DEL;SVLEN=-173 TR:VR 19:12 15:0 chr17 54981843 d_518 T . PASS END=54982832;SVTYPE=DEL;SVLEN=-989;SVINSLEN=2;SVINSSEQ=GT TR:VR 21:5 24:0 chr18 20648224 r_362_0 A AAAAGTCAACTCTGTGAGATGAAAGCACACATAAAAATGAACTTTCTATGAAAGCTGCTGTCTAGTTTTTATGTGAAAATATTACTTCTTAAGCAGAGGCCTCAAACGGCTAACAAATATCCCTTTGCAGATTATAGAT]chrUn_KI270519v1:105793] . PASS SVTYPE=BND;MATEID=r_362_1;SVINSLEN=138;SVINSSEQ=AAAGTCAACTCTGTGAGATGAAAGCACACATAAAAATGAACTTTCTATGAAAGCTGCTGTCTAGTTTTTATGTGAAAATATTACTTCTTAAGCAGAGGCCTCAAACGGCTAACAAATATCCCTTTGCAGATTATAGAT TR:VR 67:4 63:0 chrUn_KI270519v1 105793 r_362_1 T TATCTATAATCTGCAAAGGGATATTTGTTAGCCGTTTGAGGCCTCTGCTTAAGAAGTAATATTTTCACATAAAAACTAGACAGCAGCTTTCATAGAAAGTTCATTTTTATGTGTGCTTTCATCTCACAGAGTTGACTTT]chr18:20648224] . PASS SVTYPE=BND;MATEID=r_362_0;SVINSLEN=138;SVINSSEQ=ATCTATAATCTGCAAAGGGATATTTGTTAGCCGTTTGAGGCCTCTGCTTAAGAAGTAATATTTTCACATAAAAACTAGACAGCAGCTTTCATAGAAAGTTCATTTTTATGTGTGCTTTCATCTCACAGAGTTGACTTT TR:VR 67:4 63:0 chr19 55828266 r_399_0 T [chr19:55831982[C . PASS SVTYPE=BND;MATEID=r_399_1 TR:VR 42:12 19:0 chr19 55831982 r_399_1 C [chr19:55828266[C . PASS SVTYPE=BND;MATEID=r_399_0 TR:VR 42:12 19:0 chr3 18213805 r_541_0 T T]chrX:155310680] . PASS SVTYPE=BND;MATEID=r_541_1 TR:VR 76:20 41:0 chrX 155310680 r_541_1 T T]chr3:18213805] . PASS SVTYPE=BND;MATEID=r_541_0 TR:VR 76:20 41:0 chr4 67495095 d_949 T . PASS END=67495145;SVTYPE=DEL;SVLEN=-50 TR:VR 22:5 14:0 chr5 82641348 d_1020 G . PASS END=82641395;SVTYPE=DEL;SVLEN=-47 TR:VR 15:3 20:0 chr7 104556697 r_731 A . PASS END=104558844;SVTYPE=DUP;SVLEN=2147 TR:VR 57:6 21:0 chr7 48031879 r_715 G . PASS END=48039793;SVTYPE=DUP;SVLEN=7914;SVINSLEN=12;SVINSSEQ=CACCCAGTCACT TR:VR 44:4 22:0 chr8 127829496 r_774 A . Too_low_VAF END=127836134;SVTYPE=DUP;SVLEN=6638 TR:VR 141:4 26:0 chr1 51513566 d_33 A . Too_small_size END=51513602;SVTYPE=DEL;SVLEN=-36 TR:VR 24:18 15:0 chr12 94077314 r_205 A . PASS END=94118392;SVTYPE=DEL;SVLEN=-41078 TR:VR 40:3 25:0 chr14 91637349 r_254 G . Too_low_VAF END=91643657;SVTYPE=DUP;SVLEN=6308 TR:VR 77:3 21:0 chr15 50740429 d_397 A . Too_small_size END=50740475;SVTYPE=DEL;SVLEN=-46 TR:VR 24:4 14:0 chr16 85454518 r_324_0 G ]chr17:82219390]A . PASS SVTYPE=BND;MATEID=r_324_1 TR:VR 57:16 26:0 chr17 82219390 r_324_1 A A[chr16:85454518[ . PASS SVTYPE=BND;MATEID=r_324_0 TR:VR 57:16 26:0 chr17 56030830 d_519 A . Too_small_size END=56030865;SVTYPE=DEL;SVLEN=-35 TR:VR 27:3 14:0 chr2 176348735 r_454_0 G GTCGGAAGATA]chr2_KI270716v1_random:54032] . Too_low_VAF SVTYPE=BND;MATEID=r_454_1;SVINSLEN=10;SVINSSEQ=TCGGAAGATA TR:VR 61:3 31:0 chr2_KI270716v1_random 54032 r_454_1 A ATATCTTCCGA]chr2:176348735] . Too_low_VAF SVTYPE=BND;MATEID=r_454_0;SVINSLEN=10;SVINSSEQ=TATCTTCCGA TR:VR 61:3 31:0 chr2 33431247 r_409_0 G G]chr2:33436431] . PASS SVTYPE=BND;MATEID=r_409_1 TR:VR 37:3 18:0 chr2 33436431 r_409_1 T T]chr2:33431247] . PASS SVTYPE=BND;MATEID=r_409_0 TR:VR 37:3 18:0 chr2 95166458 r_431_0 G [chr21:44734803[T . PASS SVTYPE=BND;MATEID=r_431_1 TR:VR 76:7 29:0 chr21 44734803 r_431_1 T [chr2:95166458[T . PASS SVTYPE=BND;MATEID=r_431_0 TR:VR 76:7 29:0 chr21 10418983 r_497 A . Too_low_VAF END=15407382;SVTYPE=DUP;SVLEN=4988399;SVINSLEN=3;SVINSSEQ=CAT TR:VR 266:3 183:0 chr3 183895319 d_891 A . PASS END=183895390;SVTYPE=DEL;SVLEN=-71 TR:VR 28:7 21:0 chr4 71307645 d_950 T . Too_small_size END=71307682;SVTYPE=DEL;SVLEN=-37 TR:VR 28:10 20:0 chr7 105149666 r_732_0 A A]chr9:129446478] . Too_low_VAF SVTYPE=BND;MATEID=r_732_1 TR:VR 62:3 47:1 chr9 129446478 r_732_1 A A]chr7:105149666] . Too_low_VAF SVTYPE=BND;MATEID=r_732_0 TR:VR 62:3 47:1 chr1 225000681 d_98 A . PASS END=225000807;SVTYPE=DEL;SVLEN=-126 TR:VR 36:3 21:0 chr1 52553815 d_34 G . PASS END=52553943;SVTYPE=DEL;SVLEN=-128 TR:VR 31:6 17:0 chr12 96431837 r_206 T . PASS END=98593360;SVTYPE=DUP;SVLEN=2161523 TR:VR 50:13 38:0 chr14 91717539 r_255_0 T T[chr4:54009308[ . PASS SVTYPE=BND;MATEID=r_255_1 TR:VR 121:16 35:0 chr4 54009308 r_255_1 A ]chr14:91717539]A . PASS SVTYPE=BND;MATEID=r_255_0 TR:VR 121:16 35:0 chr15 53072356 d_398 A . Too_small_size END=53072401;SVTYPE=DEL;SVLEN=-45 TR:VR 31:6 27:0 chr17 57914679 r_344 G . PASS END=57945830;SVTYPE=DUP;SVLEN=31151 TR:VR 47:9 36:0 chr2 176348881 d_676 C . PASS END=176348998;SVTYPE=DEL;SVLEN=-117 TR:VR 28:12 17:0 chr2 97050105 r_432_0 G G]chr2:206404804] . PASS SVTYPE=BND;MATEID=r_432_1 TR:VR 75:11 50:0 chr2 206404804 r_432_1 A A]chr2:97050105] . PASS SVTYPE=BND;MATEID=r_432_0 TR:VR 75:11 50:0 chr3 184227134 r_579 T . PASS END=184241148;SVTYPE=DUP;SVLEN=14014 TR:VR 38:3 22:0 chr3 66831167 d_858 A . Too_small_size END=66831212;SVTYPE=DEL;SVLEN=-45 TR:VR 27:19 21:0 chr4 72116302 r_615_0 T TA]chr4:72126368] . PASS SVTYPE=BND;MATEID=r_615_1;SVINSLEN=1;SVINSSEQ=A TR:VR 28:7 21:0 chr4 72126368 r_615_1 C CT]chr4:72116302] . PASS SVTYPE=BND;MATEID=r_615_0;SVINSLEN=1;SVINSSEQ=T TR:VR 28:7 21:0 chr5 178325754 r_667 G . PASS END=178326407;SVTYPE=DUP;SVLEN=653 TR:VR 26:9 16:0 chr6 31428192 d_1048 T . PASS END=31428218;SVTYPE=INS;SVINSLEN=84;SVINSSEQ=TATATATATTCTATATATTCTATATATTCTATATATATTCTATATATTCTATATATATATTCTATATATTCTATATATATATTC TR:VR 58:6 41:1 chr7 51902571 i_630 T . PASS END=51902571;SVTYPE=INS;SVINSLEN=327;SVINSSEQ=TGTGGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCT TR:VR 33:5 9:0 chr9 84920429 d_1225 T . PASS END=84920488;SVTYPE=DEL;SVLEN=-59;SVINSLEN=1;SVINSSEQ=A TR:VR 23:5 15:0 chrX 154054212 d_1392 T . Too_small_size END=154054257;SVTYPE=DEL;SVLEN=-45 TR:VR 38:3 13:0 chr1 227076830 r_65 C . PASS END=227082822;SVTYPE=DUP;SVLEN=5992 TR:VR 52:4 17:0 chr1 54123975 r_20_0 G G]chr8:47116897] . PASS SVTYPE=BND;MATEID=r_20_1 TR:VR 56:6 34:0 chr8 47116897 r_20_1 T T]chr1:54123975] . PASS SVTYPE=BND;MATEID=r_20_0 TR:VR 56:6 34:0 chr10 97864326 r_123 C . PASS END=98351155;SVTYPE=DEL;SVLEN=-486829 TR:VR 44:8 27:0 chr15 54352154 d_399 T . PASS END=54353006;SVTYPE=DEL;SVLEN=-852 TR:VR 33:5 24:0 chr17 59981227 r_345_0 A [chr4:93972713[T . Too_low_VAF SVTYPE=BND;MATEID=r_345_1 TR:VR 78:3 24:0 chr4 93972713 r_345_1 T [chr17:59981227[T . Too_low_VAF SVTYPE=BND;MATEID=r_345_0 TR:VR 78:3 24:0 chr18 20673869 r_363_0 A AAAAGTCAACTCTGTGAGATGAAAGCACACATAAAAATGAACTTTCTATGAAAGCTGCTGTCTAGTTTTTATGTGAAAATATTACTTCTTAAGCAGAGGCCTCAAACGGCTAACAAATATCCCTTTGCAGATTATAGAT]chrUn_KI270519v1:105793] . Too_low_VAF SVTYPE=BND;MATEID=r_363_1;SVINSLEN=138;SVINSSEQ=AAAGTCAACTCTGTGAGATGAAAGCACACATAAAAATGAACTTTCTATGAAAGCTGCTGTCTAGTTTTTATGTGAAAATATTACTTCTTAAGCAGAGGCCTCAAACGGCTAACAAATATCCCTTTGCAGATTATAGAT TR:VR 110:5 79:0 chrUn_KI270519v1 105793 r_363_1 T TATCTATAATCTGCAAAGGGATATTTGTTAGCCGTTTGAGGCCTCTGCTTAAGAAGTAATATTTTCACATAAAAACTAGACAGCAGCTTTCATAGAAAGTTCATTTTTATGTGTGCTTTCATCTCACAGAGTTGACTTT]chr18:20673869] . Too_low_VAF SVTYPE=BND;MATEID=r_363_0;SVINSLEN=138;SVINSSEQ=ATCTATAATCTGCAAAGGGATATTTGTTAGCCGTTTGAGGCCTCTGCTTAAGAAGTAATATTTTCACATAAAAACTAGACAGCAGCTTTCATAGAAAGTTCATTTTTATGTGTGCTTTCATCTCACAGAGTTGACTTT TR:VR 110:5 79:0 chr2 176914418 d_677 T . PASS END=176914465;SVTYPE=DEL;SVLEN=-47 TR:VR 19:5 20:0 chr2 3534837 r_402 A . PASS END=3541421;SVTYPE=DUP;SVLEN=6584 TR:VR 32:5 14:0 chr4 72116309 r_616_0 A [chr4:72127286[A . PASS SVTYPE=BND;MATEID=r_616_1 TR:VR 28:3 21:0 chr4 72127286 r_616_1 A [chr4:72116309[A . PASS SVTYPE=BND;MATEID=r_616_0 TR:VR 28:3 21:0 chr7 107667578 r_734 A . PASS END=107671083;SVTYPE=DUP;SVLEN=3505 TR:VR 50:10 18:0 chr7 52820765 i_631 A . PASS END=52820765;SVTYPE=INS;SVINSLEN=942;SVINSSEQ=ATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAATCATAATTTTAGCTAATGTTTTAATTATCATTTTATGTTCTATTAACCAGATCAAAAACTTGTTTCACTTGATTTTTAGTAGATTTTATCTCATTTTATTGTTATTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGA TR:VR 34:4 15:0 chr9 135073718 r_814 G . PASS END=135078159;SVTYPE=DUP;SVLEN=4441 TR:VR 31:14 14:0 chr9 85135741 d_1226 C . Too_small_size END=85135778;SVTYPE=DEL;SVLEN=-37 TR:VR 25:7 18:0 chr10 14129377 d_127 T . Too_small_size END=14129412;SVTYPE=DEL;SVLEN=-35 TR:VR 68:12 17:0 chr10 97881892 r_124 C . PASS END=99142953;SVTYPE=DUP;SVLEN=1261061;SVINSLEN=2;SVINSSEQ=CT TR:VR 44:12 42:0 chr11 65425481 r_149 C . PASS END=65432000;SVTYPE=DUP;SVLEN=6519 TR:VR 23:5 20:0 chr14 100395799 d_315 G . Too_small_size END=100395840;SVTYPE=DEL;SVLEN=-41 TR:VR 30:4 14:0 chr14 92793759 r_256_0 T ]chr8:123758816]A . Too_low_VAF SVTYPE=BND;MATEID=r_256_1 TR:VR 120:5 30:0 chr8 123758816 r_256_1 A A[chr14:92793759[ . Too_low_VAF SVTYPE=BND;MATEID=r_256_0 TR:VR 120:5 30:0 chr15 57342499 d_400 G . PASS END=57342531;SVTYPE=INS;SVINSLEN=132;SVINSSEQ=AGTGCAGTGGCGCGATCTCGGCTCACTGCAACCTCCACCTCCCGGGTTCAAGCAATTCTCCAGCCTCAGCCTCCTGAGTAGCTGGGATGACAGGCATGCGCCATCGTGCTCGGCTAATTTTGTATTTTTAGG TR:VR 35:6 19:0 chr16 86937370 d_494 G . PASS END=86937423;SVTYPE=DEL;SVLEN=-53 TR:VR 32:4 11:0 chr17 59982168 r_346_0 A A]chr4:93973581] . PASS SVTYPE=BND;MATEID=r_346_1 TR:VR 79:8 24:0 chr4 93973581 r_346_1 T T]chr17:59982168] . PASS SVTYPE=BND;MATEID=r_346_0 TR:VR 79:8 24:0 chr19 58527868 r_401_0 G G[chr7:342293[ . PASS SVTYPE=BND;MATEID=r_401_1 TR:VR 34:4 43:0 chr7 342293 r_401_1 A ]chr19:58527868]A . PASS SVTYPE=BND;MATEID=r_401_0 TR:VR 34:4 43:0 chr2 97992412 d_658 A . PASS END=97992459;SVTYPE=DEL;SVLEN=-47 TR:VR 26:12 21:0 chr3 185108544 d_893 T . PASS END=185108652;SVTYPE=DEL;SVLEN=-108 TR:VR 28:9 14:0 chr3 68997418 r_554 C . PASS END=69136563;SVTYPE=DUP;SVLEN=139145 TR:VR 70:7 38:0 chr4 73658520 d_951 G . Too_small_size END=73658558;SVTYPE=DEL;SVLEN=-38 TR:VR 22:10 9:0 chr5 178325851 d_1035 G . PASS END=178326166;SVTYPE=DEL;SVLEN=-315;SVINSLEN=204;SVINSSEQ=CCGTCTGCCCATCAGTCCCATTGCCAGACCACGAGCTCCCCAAAGCTGGGACCGTGTTGGCTTGGTCTAGGTCCTCTGAGTGGCCCAGGCCCAGGCAGAATCCTGCTAAACAGGACCAAGGTGGACATTCCAACAGCCCTGGCTAGAAAGACCCCGGCGGCTCACCCTTGGTTCATAAACTGGCATTTCCCACTGCAGTGGATG TR:VR 23:4 16:0 chr5 89192496 r_656 G . PASS END=89200491;SVTYPE=DUP;SVLEN=7995 TR:VR 41:8 17:0 chr7 54606783 r_716 T . PASS END=54611372;SVTYPE=DUP;SVLEN=4589 TR:VR 50:12 15:0 chr8 130195168 r_776 A . Too_low_VAF END=130201337;SVTYPE=DUP;SVLEN=6169 TR:VR 72:3 16:0 chr1 229445324 r_66 G . PASS END=229453115;SVTYPE=DUP;SVLEN=7791 TR:VR 62:13 23:0 chr1 56150085 d_35 G . PASS END=56152091;SVTYPE=DEL;SVLEN=-2006 TR:VR 25:8 12:0 chr10 14209688 d_128 T . PASS END=14209741;SVTYPE=DEL;SVLEN=-53 TR:VR 60:5 15:0 chr11 65462505 r_150_0 T [chr11:65466343[G . PASS SVTYPE=BND;MATEID=r_150_1 TR:VR 37:6 16:0 chr11 65466343 r_150_1 G [chr11:65462505[G . PASS SVTYPE=BND;MATEID=r_150_0 TR:VR 37:6 16:0 chr13 102903418 i_167 T . PASS END=102903418;SVTYPE=INS;SVINSLEN=6113;SVINSSEQ=AAAACTTCTTGTGGGGGGGAGGAGCCAAGATGGCCGAATAGGAACAGACTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGTGATTTCTGCATTTTCCATCTGAGGTACCGGGTTCATCTCATCTAGGGAGTGCCAGACAGTGGGCGCAGGCGAGTGTATTGTGCACACCGTGCGCGAGCCGATGAGCAGAGAGCGAGGCATTGCCTCACTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAAAGGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAGACCGGCTTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCGGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCGGCAACGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACTGCCTCCTCAAGTGGGTCCCTGACTCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACACAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAACAACAGAACAAAGCTGGATGGAGAATGATTTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATAACCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGCGAAAAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTTTGATTGGTGTACCTGAAAGTGATGTGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAAGGAAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGACAAGCAAATGTTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTGCTATATGGAAAGGAACAACCAGTACCAGCCGCTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAGGGTTGGATAAAGAGCTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAGAAGAGCTAACTATCCTAACATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCCACACAATAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACCAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTGGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATCGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGACAAAAACTGGAAGCATTCCCTTTGAAAACTGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTGTTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA TR:VR 19:8 23:0 chr14 93117420 i_185 A . PASS END=93117519;SVTYPE=INS;SVINSLEN=421;SVINSSEQ=GGCCCCTTCACGACTGGACTCAAGGAACACAAAAGGTTTTTGCGATTGTCTGTTGTTTTTCAACAACTAACATATAGGAATAGATTGAAATAGAGATTTCTCCAAAACAGTGCTGGACGAATGCCTCAAGGGGCTCACACAACCTGTTCCAGGACTTGGTGACCATTGTTTGTGTCTATGTTCAATTGAGTTCAAATTTAGTATTTAACTTTTCCTCCACAAGGCTCTGGATGGAGGTGGGGAAGGGTTCTCTAGAAAAGAGTCTAAATAAATGGGCTAATCAAAGTGCTGAGAGGCCAGTACTCAGGAATGGAGAGCACTGATATGGAGGCTGCTGCAAACTGAAACTAGGGGGGAAAATGTAGGAGAAAAATGTACAGGTGTCTATAGGAGTTTTGTCTTTGATCTCAAAGCTTTAAAG TR:VR 47:41 22:0 chr15 59372576 r_281 C . PASS END=59382526;SVTYPE=DUP;SVLEN=9950 TR:VR 43:3 28:0 chr17 60092957 r_347 A . PASS END=60101222;SVTYPE=DUP;SVLEN=8265 TR:VR 42:5 18:0 chr2 181427339 d_679 A . Too_small_size END=181427377;SVTYPE=DEL;SVLEN=-38 TR:VR 26:16 12:0 chr2 99280103 i_356 C . PASS END=99280103;SVTYPE=INS;SVINSLEN=6068;SVINSSEQ=AAAAACTTATCTCGGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTGAGGTACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCTGAGTCAAAGAAAGGGGTGACGGTCGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAGACCGGCTAAGAAACGGCGCACCACGAGACTATATCCCACACCTGGCTCGGAGGGTCCTACGCCCACGGAATCTCGCTGATTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCGGCACTGCGAGGCTGGGGCGCCCGCCATTGCCCAGGCTTGCTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGTGGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCTCTGTAGGCTCCACCTCTGGGGGCAGGGCACAGACAAACAAAAAGACAGCAGTAACCTCTGCAGACTTAAGTGTCCCTGTCTGACAGCTTTGAAGAGAGCAGTGGTTCTCCCAGCACGCAGCTGGAGATCTGAGAACGGGCAGACAGACTGCCTCCTCAAGTGGGTCCCTGACTCCTGACCCCCGAGCAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCACACTGACACCTCACACGGCAGGGTATTCCAACAGCACCTGCAGCTGAGGGTCCTGTCTGTTAGAAGGAAAACTAACAACCAGAAAGGACATCTACACCGAAAACCCATCTGTACATCACCATCATCAAAGACCAAAAGTAGATAAAACCACAAAGATGGGGAAAAAACAGAACAGAAAAACTGGAAACTCTAAAACGCAGAGCGCCTCTCCTCCTCCAAAGGAACGCAGTTCCTCACCAGCAACAGAACAAAGCTGGATGGAGAATGATTCTTTGACGAGCTGAGAGAAGAAGGCTTCAGACGATCAAATTACTCTGAGCTACGGGAGGACATTCAAACCAAAGGCAAAGAAGTTGAAAACTTTGAAAAAAATTTAGAAGAATGTATAACTAGAATATCCAATACAGAGAAGTGCTTAAAGGAGCTGATGGAGCTGAAAACCAAGGCTCGAGAACTACGTGAAGAATGCAGAAGCCTCAGGAGCCGATGCGATCAACTGGAAGAAAGGGTATCAGCAATGGAAGATGAAATGAATGAAATGAAGCGAGAAGGGAAGTTTAGAGAAAAAAGAATAAAAAGAAATGAGCAAAGCCTCCAAGAAATATGGGACTATGTGAAAAGACCAAATCTACGTCTGATTGGTGTACCTGAAAGTGATGGGGAGAATGGAACCAAGTTGGAAAACACTCTGCAGGATATTATCCAGGAGAACTTCCCCAATCTAGCAAGGCAGGCCAACGTTCAGATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTCGAGAAGAGCAACTCCAAGACACATAATTGTCAGATTCACCAAAGTTGAAATGAAGGAAAAAATGTTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCTCAAAGGGAAGCCCATCAGACTAACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGAGAGTGGGGGCCAATATTCAACATTCTTAAAGAAAAGAATTTTCAACCCAGAATTTCATATCCAGCCAAACTAAGCTTCATAAGTGAAGGAGAAATAAAATACTTTATAGACAAGCAAATGTTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGGAAGCGCTAAACATGGAAAGGAACAACCGGTACCAGCCGCTGCAAAATCATGCCAAAATGTAAAGACCATCGAGACTAGGAAGAAACTGCATCAACTAATGAGCAAAATCACCAGCTAACATCATAATGACAGGATCAAATTCACACATAACAATATTAACTTTAAATATAAATGGACTAAATTCTGCAATTAAAAGACACAGACTGGCAAGTTGGATAAAGAGTCAAGACCCATCAGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAGAGACACACATAGGCTCAAAATAAAAGGATGGAGGAAGATCTACCAAGCCAATGGAAAACAAAAAAAGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACCAACAAAGATCAAAAGAGACAAAGAAGGCCATTACATAATGGTAAAGGGATCAATTCAACAAGAGGAGCTAACTATCCTAAATATTTATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTCCTCAGTGACCTACAAAGAGACTTAGACTCCCACACATTAATAATGGGAGACTTTAACACCCCACTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGCACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACCTTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGAAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTCGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACATGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCGGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAATGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACCGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTATATCTAGAAAACCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCGTAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCGAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA TR:VR 21:5 21:0 chr3 185927937 r_580_0 C [chr3:185929135[C . PASS SVTYPE=BND;MATEID=r_580_1 TR:VR 38:5 11:0 chr3 185929135 r_580_1 C [chr3:185927937[C . PASS SVTYPE=BND;MATEID=r_580_0 TR:VR 38:5 11:0 chr3 71521761 r_555_0 C C]chr3:71533788] . PASS SVTYPE=BND;MATEID=r_555_1 TR:VR 31:3 16:0 chr3 71533788 r_555_1 A A]chr3:71521761] . PASS SVTYPE=BND;MATEID=r_555_0 TR:VR 31:3 16:0 chr7 109166016 d_1113 A . PASS END=109166078;SVTYPE=DEL;SVLEN=-62 TR:VR 35:27 13:0 chr8 47027923 d_1142 G . Too_small_size END=47027961;SVTYPE=DEL;SVLEN=-38 TR:VR 33:4 14:0 chr9 136840233 d_1246 T . PASS END=136841607;SVTYPE=DEL;SVLEN=-1374 TR:VR 16:10 13:0 chr9 8706601 d_1197 T . PASS END=8706719;SVTYPE=DEL;SVLEN=-118 TR:VR 56:11 15:0 chrUn_KI270538v1 60997 i_766 G . PASS END=60997;SVTYPE=INS;SVINSLEN=342;SVINSSEQ=CACACATCACAAAGAACTTTGTGAGAATGCTTCGGTGCTTCTTTTTATGTGAGGATACCCGTTTCTAACGAATTCCTCGAAGAGTTCCAAATATCCAAAAGCAGATTCTACAAAAGGAGTTTTTAAATACTGCTCTATCAAAAGACAGATTCAACTCTGACAGTAGAATGGACACATCTCAATGAAGTTCCTGAGAATGCTTCTGTCTAGTTTGTATGTGAAGATATTTCCTTATCCACCATAGGCTTCAAAGCGCTCCAAATGCACACTTGCAGGTCCTACAAAAAGACTGTTTCAAAACTGCTCTACCAAAAGAAAGCTTCCACTCTATTAGGTGAATAC TR:VR 48:4 35:1 chr11 101289497 r_171_0 C [chr11:106928600[T . PASS SVTYPE=BND;MATEID=r_171_1 TR:VR 62:5 39:0 chr11 106928600 r_171_1 T [chr11:101289497[T . PASS SVTYPE=BND;MATEID=r_171_0 TR:VR 62:5 39:0 chr11 65493941 r_151_0 C C]chr4:132279397] . PASS SVTYPE=BND;MATEID=r_151_1 TR:VR 64:4 40:0 chr4 132279397 r_151_1 A A]chr11:65493941] . PASS SVTYPE=BND;MATEID=r_151_0 TR:VR 64:4 40:0 chr13 105404621 d_272 A . Too_small_size END=105404658;SVTYPE=DEL;SVLEN=-37 TR:VR 30:17 13:0 chr15 59606834 d_401 C . Too_small_size END=59606871;SVTYPE=DEL;SVLEN=-37 TR:VR 41:6 12:0 chr18 80200290 d_577 C . PASS END=80200360;SVTYPE=DEL;SVLEN=-70 TR:VR 6:3 21:0 chr2 182310540 r_455_0 C [chr7:73956836[G . PASS SVTYPE=BND;MATEID=r_455_1 TR:VR 44:3 33:0 chr7 73956836 r_455_1 G [chr2:182310540[G . PASS SVTYPE=BND;MATEID=r_455_0 TR:VR 44:3 33:0 chr2 37390344 r_411 A . PASS END=37394100;SVTYPE=DUP;SVLEN=3756 TR:VR 27:5 21:0 chr22 10722103 d_795 G . Too_low_VAF END=10722186;SVTYPE=DEL;SVLEN=-83 TR:VR 118:4 60:0 chr3 185931621 d_894 T . PASS END=185934550;SVTYPE=DEL;SVLEN=-2929;SVINSLEN=6;SVINSSEQ=ATCTTA TR:VR 33:9 15:0 chr5 99391767 d_1021 T . PASS END=99392189;SVTYPE=DEL;SVLEN=-422 TR:VR 17:7 14:0 chr6 32307901 d_1052 A . PASS END=32308918;SVTYPE=DEL;SVLEN=-1017;SVINSLEN=1;SVINSSEQ=C TR:VR 22:3 18:0 chr9 9160974 r_785 T . Too_low_VAF END=9165901;SVTYPE=DUP;SVLEN=4927 TR:VR 69:3 26:0 chr1 57413226 r_22_0 A A]chr1:57456876] . PASS SVTYPE=BND;MATEID=r_22_1 TR:VR 43:4 39:0 chr1 57456876 r_22_1 C C]chr1:57413226] . PASS SVTYPE=BND;MATEID=r_22_0 TR:VR 43:4 39:0 chr10 14386111 d_129 G . Too_small_size END=14386146;SVTYPE=DEL;SVLEN=-35 TR:VR 52:6 14:0 chr11 1017125 i_96 G . Too_low_VAF END=1017125;SVTYPE=INS;SVINSLEN=166;SVINSSEQ=GTTCCTGTACTGGTGGGGTTGGGGGTGATGTTGGTGGTAGAAGTTGAGGTGGCTTCAGCATGGTGTGTGGAGGAAGTGTGTGAATGTAGGGATGTAGAGGTTTTGGCTGTGTTTAATGAGCTCAGGGCTTGGCTGGTCCCGCTGGTGGTCGGCGTCATTGTTGGCG TR:VR 70:3 18:0 chr11 65846560 d_201 C . PASS END=65846684;SVTYPE=DEL;SVLEN=-124;SVINSLEN=2;SVINSSEQ=CA TR:VR 34:7 23:0 chr14 102055914 r_263 A . PASS END=102084664;SVTYPE=DUP;SVLEN=28750 TR:VR 58:8 35:0 chr19 10114144 r_382 G . PASS END=10129258;SVTYPE=DUP;SVLEN=15114 TR:VR 60:5 34:0 chr2 182343750 r_456 A . PASS END=182346165;SVTYPE=DUP;SVLEN=2415 TR:VR 33:4 17:0 chr2 37602659 d_625 A . PASS END=37602709;SVTYPE=DEL;SVLEN=-50 TR:VR 27:9 21:0 chr20 11758295 i_399 T . PASS END=11758295;SVTYPE=INS;SVINSLEN=488;SVINSSEQ=AAAGAGTTTGTGTTGTCCATGTACAGAAAGCTATTTCACTAAAGTAGTGGAAGAATTCTTGCTGTGTATTTTTATGATTAAATCTCAGGAAAATGTAAAAAAAAAAAAAAAAAAAATAACTTAAAATTCCTTCAATATTAAATGATGTAGTTATATTCAATAAGTCGTGTTTATATTACATTTATAATATTTAAATGAGATTTGAAAACAAACAAAATAACCCACCCTAGAACAAATGCATCTCTTTAGCTAGACTGACAAATAAACAAAAAAATGCTACTGATTTCAGAACATTTGAATGATAAAGCCTACTCTTGTTCCAACTTAATTTATCTTAAACATGAAAATGTAACATGACCTCATTATTGACATGGATCATAAGGTAAATAAAAAGTACATTCATGAAATTGATGATACAGGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA TR:VR 29:4 24:0 chr3 185937630 r_581_0 C C[chr8:55628940[ . PASS SVTYPE=BND;MATEID=r_581_1 TR:VR 79:7 30:0 chr8 55628940 r_581_1 A ]chr3:185937630]A . PASS SVTYPE=BND;MATEID=r_581_0 TR:VR 79:7 30:0 chr3 73020667 r_557 C . PASS END=73044955;SVTYPE=DEL;SVLEN=-24288 TR:VR 33:8 27:0 chr4 75653049 d_952 T . PASS END=75653662;SVTYPE=DEL;SVLEN=-613;SVINSLEN=2;SVINSSEQ=AA TR:VR 18:6 13:0 chr9 9200898 r_786 A . PASS END=9609839;SVTYPE=DEL;SVLEN=-408941 TR:VR 81:5 34:0 chr1 231008834 r_67 C . PASS END=231010736;SVTYPE=DEL;SVLEN=-1902 TR:VR 42:5 11:0 chr1 57413251 r_23_0 T [chr1:57456881[T . PASS SVTYPE=BND;MATEID=r_23_1 TR:VR 43:4 39:0 chr1 57456881 r_23_1 T [chr1:57413251[T . PASS SVTYPE=BND;MATEID=r_23_0 TR:VR 43:4 39:0 chr10 14588743 r_85_0 T T]chr10:56237642] . PASS SVTYPE=BND;MATEID=r_85_1 TR:VR 82:10 40:0 chr10 56237642 r_85_1 A A]chr10:14588743] . PASS SVTYPE=BND;MATEID=r_85_0 TR:VR 82:10 40:0 chr11 66349791 i_109 C . PASS END=66349791;SVTYPE=INS;SVINSLEN=305;SVINSSEQ=CAGGCTGGTCTCGAACTCCTAACTTCAGGTGATCCACTCACCTTGGCCTCCCAAAGTGTTGGGATTACAGGTGTGAGCCACTGCGCCCAGCCCTATTATTATTATTATTATTTTTGAGACAGAGTTTCGCTCTTGTTGCCCAGGCTGGAGTGCAATGGCTCAATCTCGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCGGAGTAGCTGGGATTACAGGCATGTACCACCATGCCCAGCTAATTTTGTATTTTTAGTAGACTAGGGTTTCTCCATGTTAGTC TR:VR 36:5 17:0 chr14 93117488 i_188 A . PASS END=93117519;SVTYPE=INS;SVINSLEN=82;SVINSSEQ=AACTGAAACTAGGGGGGAAAATGTAGGAGAAAAATGTACAGGTGTCTATAGGAGTTTTGTCTTTGATCTCAAAGCTTTAAAG TR:VR 47:42 22:0 chr15 66824299 r_283 C . PASS END=66828734;SVTYPE=DUP;SVLEN=4435;SVINSLEN=10;SVINSSEQ=TGTGTCTACT TR:VR 39:4 14:0 chr18 22167158 r_364_0 G [chr21:39319428[A . PASS SVTYPE=BND;MATEID=r_364_1 TR:VR 49:4 28:0 chr21 39319428 r_364_1 A [chr18:22167158[A . PASS SVTYPE=BND;MATEID=r_364_0 TR:VR 49:4 28:0 chr19 8027911 r_380 G . PASS END=8064773;SVTYPE=DEL;SVLEN=-36862 TR:VR 21:6 33:0 chr20 11758309 r_478_0 T TGTCC]chr20:11758313] . PASS SVTYPE=BND;MATEID=r_478_1;SVINSLEN=4;SVINSSEQ=GTCC TR:VR 29:4 24:0 chr20 11758313 r_478_1 T TGGAC]chr20:11758309] . PASS SVTYPE=BND;MATEID=r_478_0;SVINSLEN=4;SVINSSEQ=GGAC TR:VR 29:4 24:0 chr21 15311769 r_498 T . PASS END=18307305;SVTYPE=DUP;SVLEN=2995536;SVINSLEN=15;SVINSSEQ=AGGCTAAATGTATCA TR:VR 57:6 32:0 chr3 188583700 r_582 A . PASS END=188728247;SVTYPE=DEL;SVLEN=-144547 TR:VR 52:5 30:0 chr3 7988802 d_844 C . PASS END=7989155;SVTYPE=DEL;SVLEN=-353 TR:VR 39:4 22:0 chr4 76293516 d_953 G . PASS END=76293645;SVTYPE=DEL;SVLEN=-129 TR:VR 21:14 19:0 chr5 179696980 r_668_0 T ]chr6:87852593]A . PASS SVTYPE=BND;MATEID=r_668_1 TR:VR 42:6 34:0 chr6 87852593 r_668_1 A A[chr5:179696980[ . PASS SVTYPE=BND;MATEID=r_668_0 TR:VR 42:6 34:0 chr6 101603944 d_1067 C . PASS END=101604010;SVTYPE=DEL;SVLEN=-66 TR:VR 19:8 16:0 chr8 52855536 r_747 C . PASS END=52863934;SVTYPE=DUP;SVLEN=8398;SVINSLEN=2;SVINSSEQ=GT TR:VR 40:3 23:0 chr9 9282246 d_1198 A . PASS END=9282293;SVTYPE=DEL;SVLEN=-47 TR:VR 46:10 20:0 chr11 112042094 d_207 G . Too_small_size END=112042135;SVTYPE=DEL;SVLEN=-41 TR:VR 36:4 24:0 chr12 132692504 i_144 T . PASS END=132692504;SVTYPE=INS;SVINSLEN=329;SVINSSEQ=AGTTAAGTGAGCGCCCTTTAGCCAGTTAGTTAGTGAGCGCCCTTAGCCAGTTAGTGAGCGCCCTTGCCAGTTAGTTAGTGAGCTTCCCTTGCCAGTTAGTTAGTGAGCGCCCTTGCCAGTTAGTGAGCTCCCTTAGCCAGTTAGTTAGTGAGCTCCCTTAGCCAGTTAGTGAGCGCCCTTGCCAGTTAGTTAAGTGAGCGCCCTTTAGCCAGTTAGTTAGTGAGCGCCCTTAGTCAGTTAGTTAGCGCCTTGCCAGTTAGTTAGTGAGCTCCCCTTGCCAGTTGCTAGTGAGCTCCCTTAGCCAGTTAGTTAGTGAGCTCCCTTAGCCA TR:VR 27:7 13:0 chr18 22402527 r_365_0 C [chr8:41037698[T . PASS SVTYPE=BND;MATEID=r_365_1 TR:VR 47:7 33:0 chr8 41037698 r_365_1 T [chr18:22402527[T . PASS SVTYPE=BND;MATEID=r_365_0 TR:VR 47:7 33:0 chr19 10802849 d_582 C . PASS END=10802987;SVTYPE=DEL;SVLEN=-138 TR:VR 36:11 19:0 chr2 4251495 r_403 C . PASS END=4254091;SVTYPE=DUP;SVLEN=2596 TR:VR 26:5 18:0 chr20 12084553 r_479_0 C C]chr6:39627157] . PASS SVTYPE=BND;MATEID=r_479_1 TR:VR 44:8 36:0 chr6 39627157 r_479_1 C C]chr20:12084553] . PASS SVTYPE=BND;MATEID=r_479_0 TR:VR 44:8 36:0 chr21 15629570 r_499 T . PASS END=34100035;SVTYPE=DUP;SVLEN=18470465 TR:VR 59:7 26:0 chr3 189852818 r_583 A . PASS END=189899254;SVTYPE=DUP;SVLEN=46436 TR:VR 75:5 30:0 chr4 2053138 r_591_0 A ]chr8:132639044]T . PASS SVTYPE=BND;MATEID=r_591_1 TR:VR 81:32 32:0 chr8 132639044 r_591_1 T T[chr4:2053138[ . PASS SVTYPE=BND;MATEID=r_591_0 TR:VR 81:32 32:0 chr8 54111198 d_1144 A . Too_small_size END=54111238;SVTYPE=DEL;SVLEN=-40 TR:VR 28:4 20:0 chr9 9289424 r_787 C . PASS END=9378588;SVTYPE=DEL;SVLEN=-89164;SVINSLEN=1;SVINSSEQ=T TR:VR 79:12 24:0 chr1 65162215 r_24 T . PASS END=65174846;SVTYPE=DUP;SVLEN=12631 TR:VR 38:3 29:0 chr11 68334768 r_152 G . PASS END=68474925;SVTYPE=DEL;SVLEN=-140157 TR:VR 56:6 36:0 chr14 102457081 d_317 A . PASS END=102457142;SVTYPE=DEL;SVLEN=-61 TR:VR 25:9 18:0 chr14 94520101 i_190 A . PASS END=94520101;SVTYPE=INS;SVINSLEN=202;SVINSSEQ=GTGGTTATGGAGGTGGTGGTGATGGTGGTGGTGGTGATGGTATTGATAATAACTGGGGCGGTGGTAGTCATGGTGGTGATTATAGTTATGGTGATGACAGTGGTGGCGATGGAGAGGCTGGTGATGGTGGTGCTGGTGATGGTGATGACAGAGCTGGTGGTGGTGACAGTGGTGATAATAGTTGTGGTGGTGATGGAGGTGG TR:VR 73:7 19:0 chr15 68701607 d_402 T . PASS END=68701673;SVTYPE=INS;SVINSLEN=147;SVINSSEQ=CCTGAGAAGCTGGGACTACAGGCGCCTGCAACCACGCCCGGCTAATTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTTTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGACTCACTGCAAGCTCCGCCTCC TR:VR 28:6 22:0 chr18 22472328 r_366_0 G ]chr3:158874203]A . PASS SVTYPE=BND;MATEID=r_366_1 TR:VR 75:30 43:0 chr3 158874203 r_366_1 A A[chr18:22472328[ . PASS SVTYPE=BND;MATEID=r_366_0 TR:VR 75:30 43:0 chr19 10921762 r_383 C . PASS END=10930147;SVTYPE=DUP;SVLEN=8385 TR:VR 53:8 16:0 chr19 8913300 r_381_0 A A]chr6:32645670] . PASS SVTYPE=BND;MATEID=r_381_1 TR:VR 38:3 34:0 chr6 32645670 r_381_1 T T]chr19:8913300] . PASS SVTYPE=BND;MATEID=r_381_0 TR:VR 38:3 34:0 chr21 15752765 r_500 T . PASS END=15784353;SVTYPE=DEL;SVLEN=-31588 TR:VR 54:11 29:0 chr4 2064251 r_592_0 C C[chr8:132635645[ . PASS SVTYPE=BND;MATEID=r_592_1 TR:VR 82:31 29:0 chr8 132635645 r_592_1 A ]chr4:2064251]A . PASS SVTYPE=BND;MATEID=r_592_0 TR:VR 82:31 29:0 chr6 10857441 r_674 G . PASS END=10861519;SVTYPE=DUP;SVLEN=4078 TR:VR 45:3 20:0 chr7 120342695 d_1114 G . PASS END=120342743;SVTYPE=DEL;SVLEN=-48 TR:VR 28:11 18:0 chr8 131221033 d_1172 T . PASS END=131230932;SVTYPE=DEL;SVLEN=-9899;SVINSLEN=1;SVINSSEQ=G TR:VR 68:4 27:0 chr8 55636180 r_748_0 G G]chr8:131910593] . PASS SVTYPE=BND;MATEID=r_748_1 TR:VR 89:5 37:0 chr8 131910593 r_748_1 A A]chr8:55636180] . PASS SVTYPE=BND;MATEID=r_748_0 TR:VR 89:5 37:0 chr9 93439629 d_1227 T . PASS END=93439942;SVTYPE=DEL;SVLEN=-313 TR:VR 22:15 20:0 chr1 235017216 d_100 A . Too_small_size END=235017259;SVTYPE=DEL;SVLEN=-43 TR:VR 41:5 21:0 chr1 65249662 r_25 G . PASS END=93580479;SVTYPE=DEL;SVLEN=-28330817 TR:VR 48:4 43:0 chr10 16711540 r_86 T . PASS END=16745804;SVTYPE=DEL;SVLEN=-34264;SVINSLEN=4;SVINSSEQ=TAAC TR:VR 81:9 29:0 chr11 117143322 d_208 G . PASS END=117143550;SVTYPE=DEL;SVLEN=-228 TR:VR 25:18 14:0 chr14 104279357 d_318 G . PASS END=104279414;SVTYPE=DEL;SVLEN=-57 TR:VR 33:13 12:0 chr14 96854971 r_257 T . PASS END=96856912;SVTYPE=DEL;SVLEN=-1941 TR:VR 57:35 16:0 chr15 70594538 d_403 A . PASS END=70594585;SVTYPE=DEL;SVLEN=-47 TR:VR 29:12 13:0 chr18 22479301 r_367_0 T T[chr3:158860296[ . Too_low_VAF SVTYPE=BND;MATEID=r_367_1 TR:VR 93:4 38:0 chr3 158860296 r_367_1 A ]chr18:22479301]A . Too_low_VAF SVTYPE=BND;MATEID=r_367_0 TR:VR 93:4 38:0 chr19 10939197 d_583 T . PASS END=10939277;SVTYPE=DEL;SVLEN=-80;SVINSLEN=3;SVINSSEQ=TTT TR:VR 42:6 17:0 chr1_KI270706v1_random 115567 d_612 T . PASS END=118026;SVTYPE=DEL;SVLEN=-2459 TR:VR 34:16 29:0 chr2 186603137 r_457 A . PASS END=186624442;SVTYPE=DUP;SVLEN=21305 TR:VR 46:4 29:0 chr21 18128077 d_777 G . Too_small_size END=18128114;SVTYPE=DEL;SVLEN=-37 TR:VR 31:13 22:0 chr3 84110371 d_860 C . PASS END=84110524;SVTYPE=DEL;SVLEN=-153;SVINSLEN=1;SVINSSEQ=T TR:VR 14:3 13:0 chr6 108734329 r_692 T . PASS END=109373568;SVTYPE=DUP;SVLEN=639239 TR:VR 47:6 23:0 chr7 123437641 r_735 T . PASS END=123447860;SVTYPE=DUP;SVLEN=10219 TR:VR 44:9 25:0 chr8 131225118 d_1173 C . PASS END=131225376;SVTYPE=DEL;SVLEN=-258 TR:VR 58:14 20:0 chr8 55788578 d_1145 C . PASS END=55796842;SVTYPE=DEL;SVLEN=-8264;SVINSLEN=11;SVINSSEQ=AGCCTCCCGAG TR:VR 64:4 18:0 chr9 9440558 r_788 A . PASS END=9528581;SVTYPE=DEL;SVLEN=-88023 TR:VR 79:5 50:0 chr1 235028321 r_68 T . PASS END=235036293;SVTYPE=DUP;SVLEN=7972 TR:VR 47:4 23:0 chr10 16936060 r_87_0 G ]chr8:77976379]T . PASS SVTYPE=BND;MATEID=r_87_1 TR:VR 97:5 34:0 chr8 77976379 r_87_1 T T[chr10:16936060[ . PASS SVTYPE=BND;MATEID=r_87_0 TR:VR 97:5 34:0 chr11 69499550 r_153 G . PASS END=69508007;SVTYPE=DUP;SVLEN=8457 TR:VR 40:3 16:0 chr15 70821512 r_285 T . PASS END=71588823;SVTYPE=DEL;SVLEN=-767311 TR:VR 60:13 35:0 chr17 73290181 r_349_0 C ]chr22:32605148]A . PASS SVTYPE=BND;MATEID=r_349_1 TR:VR 55:12 37:0 chr22 32605148 r_349_1 A A[chr17:73290181[ . PASS SVTYPE=BND;MATEID=r_349_0 TR:VR 55:12 37:0 chr18 24531258 d_549 C . PASS END=24531414;SVTYPE=DEL;SVLEN=-156 TR:VR 26:18 21:0 chr19 13584621 d_584 C . Too_small_size END=13584659;SVTYPE=DEL;SVLEN=-38 TR:VR 33:3 22:0 chr2 47060630 r_414 G . PASS END=47063867;SVTYPE=DUP;SVLEN=3237 TR:VR 26:4 17:0 chr21 21324681 d_778 G . PASS END=21324734;SVTYPE=DEL;SVLEN=-53 TR:VR 26:3 23:0 chr3 10001183 r_536 G . PASS END=10048321;SVTYPE=DUP;SVLEN=47138 TR:VR 87:20 32:0 chr3 193157143 d_897 C . Too_small_size END=193157187;SVTYPE=DEL;SVLEN=-44 TR:VR 30:9 21:0 chr3 85424714 d_861 G . PASS END=85426149;SVTYPE=DEL;SVLEN=-1435 TR:VR 17:5 15:0 chr4 22589677 r_597 A . PASS END=24355863;SVTYPE=DEL;SVLEN=-1766186 TR:VR 37:13 54:0 chr4 83676291 r_618 T . PASS END=109073581;SVTYPE=DUP;SVLEN=25397290 TR:VR 48:8 40:0 chr6 111740154 d_1069 A . PASS END=111740352;SVTYPE=DEL;SVLEN=-198 TR:VR 17:3 11:0 chr7 124341316 d_1115 A . PASS END=124341438;SVTYPE=DEL;SVLEN=-122 TR:VR 13:3 20:0 chr8 133334609 d_1174 G . PASS END=133334760;SVTYPE=DEL;SVLEN=-151 TR:VR 38:8 13:0 chr8 56085961 r_749 C . PASS END=56092538;SVTYPE=DUP;SVLEN=6577 TR:VR 61:10 12:0 chr9 96881805 r_802 T . PASS END=96887147;SVTYPE=DUP;SVLEN=5342 TR:VR 42:7 21:0 chr1 6782298 d_18 C . PASS END=6782399;SVTYPE=DEL;SVLEN=-101 TR:VR 26:5 11:0 chr11 69811741 r_154 A . PASS END=69821929;SVTYPE=DUP;SVLEN=10188 TR:VR 42:3 21:0 chr17 73296278 r_350_0 C CTAATAATAATAATAAAAATAATAATAATAAAAAAAAAAAAAA[chr22:32597228[ . PASS SVTYPE=BND;MATEID=r_350_1;SVINSLEN=42;SVINSSEQ=TAATAATAATAATAAAAATAATAATAATAAAAAAAAAAAAAA TR:VR 61:4 35:0 chr22 32597228 r_350_1 T ]chr17:73296278]TTTTTTTTTTTTTTATTATTATTATTTTTATTATTATTATTAT . PASS SVTYPE=BND;MATEID=r_350_0;SVINSLEN=42;SVINSSEQ=TTTTTTTTTTTTTTATTATTATTATTTTTATTATTATTATTA TR:VR 61:4 35:0 chr19 15294737 r_384 A . PASS END=15324702;SVTYPE=DEL;SVLEN=-29965 TR:VR 45:8 28:0 chr2 193398755 i_370 T . PASS END=193398765;SVTYPE=INS;SVINSLEN=47;SVINSSEQ=TACATAATTTGTTATGTAACATAATTTGTTACATAATTTGTTAATAA TR:VR 24:4 14:0 chr2 48479126 r_415 A . PASS END=48483727;SVTYPE=DUP;SVLEN=4601 TR:VR 41:3 20:0 chr4 2824888 d_915 G . PASS END=2824939;SVTYPE=DEL;SVLEN=-51 TR:VR 20:3 19:0 chr4 88354684 r_619 A . PASS END=88378230;SVTYPE=DUP;SVLEN=23546 TR:VR 69:5 35:0 chr6 116061752 d_1070 G . PASS END=116061882;SVTYPE=DEL;SVLEN=-130 TR:VR 18:9 12:0 chr9 14186076 d_1200 A . PASS END=14186123;SVTYPE=DEL;SVLEN=-47 TR:VR 30:3 13:0 chr9 97938081 r_803 T . PASS END=97951296;SVTYPE=DUP;SVLEN=13215 TR:VR 55:4 21:0 chrUn_KI270749v1 38161 d_1347 T . PASS END=38210;SVTYPE=DEL;SVLEN=-49 TR:VR 72:17 37:0 chr10 18494449 r_88_0 G G[chr3:184529467[ . PASS SVTYPE=BND;MATEID=r_88_1 TR:VR 78:5 38:0 chr3 184529467 r_88_1 A ]chr10:18494449]A . PASS SVTYPE=BND;MATEID=r_88_0 TR:VR 78:5 38:0 chr11 118010846 r_173_0 A ]chr8:118982977]TTA . PASS SVTYPE=BND;MATEID=r_173_1;SVINSLEN=2;SVINSSEQ=TT TR:VR 84:16 45:0 chr8 118982977 r_173_1 A AAA[chr11:118010846[ . PASS SVTYPE=BND;MATEID=r_173_0;SVINSLEN=2;SVINSSEQ=AA TR:VR 84:16 45:0 chr13 113807491 d_279 A . PASS END=113807550;SVTYPE=INS;SVINSLEN=137;SVINSSEQ=GGGATGTGGGGGCGGTCCTCCCCGTCACACGTGGGCTTACGGGATGTGGGGGGTGGTCCTCCCCGTCACACGAGGGCTTACGGGACGTGGGGGGCGGTCCTCCCCGTCACACGCAGGCTTACGGATGTGGGGGCGGT TR:VR 18:3 12:0 chr14 104812484 r_265 A . PASS END=104814118;SVTYPE=DUP;SVLEN=1634;SVINSLEN=1;SVINSSEQ=C TR:VR 26:6 24:0 chr14 97528245 d_311 C . PASS END=97528304;SVTYPE=DEL;SVLEN=-59 TR:VR 55:33 17:0 chr15 73939528 r_286 T . PASS END=74006935;SVTYPE=DUP;SVLEN=67407 TR:VR 45:7 33:0 chr16 8949672 d_413 C . PASS END=8950625;SVTYPE=DEL;SVLEN=-953 TR:VR 29:3 22:0 chr17 73791926 r_351_0 A AAAG]chr17:73829472] . PASS SVTYPE=BND;MATEID=r_351_1;SVINSLEN=3;SVINSSEQ=AAG TR:VR 83:8 31:0 chr17 73829472 r_351_1 T TCTT]chr17:73791926] . PASS SVTYPE=BND;MATEID=r_351_0;SVINSLEN=3;SVINSSEQ=CTT TR:VR 83:8 31:0 chr18 25700183 d_551 A . Too_small_size END=25700219;SVTYPE=DEL;SVLEN=-36 TR:VR 31:8 18:0 chr2 109345417 r_433_0 G GTTGTTTGAGATCCTCTATTTTTATATAATAT]chr2:149387147] . PASS SVTYPE=BND;MATEID=r_433_1;SVINSLEN=31;SVINSSEQ=TTGTTTGAGATCCTCTATTTTTATATAATAT TR:VR 72:4 37:0 chr2 149387147 r_433_1 A AATATTATATAAAAATAGAGGATCTCAAACAA]chr2:109345417] . PASS SVTYPE=BND;MATEID=r_433_0;SVINSLEN=31;SVINSSEQ=ATATTATATAAAAATAGAGGATCTCAAACAA TR:VR 72:4 37:0 chr2 193433722 d_681 T . PASS END=193433773;SVTYPE=DEL;SVLEN=-51 TR:VR 40:5 8:0 chr2 50857494 d_626 G . Too_small_size END=50857531;SVTYPE=DEL;SVLEN=-37 TR:VR 16:5 17:0 chr20 13969095 d_702 A . Too_small_size END=13969135;SVTYPE=DEL;SVLEN=-40 TR:VR 24:5 16:0 chr20 31159117 d_750 C . PASS END=31161629;SVTYPE=DEL;SVLEN=-2512;SVINSLEN=1;SVINSSEQ=A TR:VR 40:7 13:0 chr21 22083304 d_779 A . PASS END=22083359;SVTYPE=DEL;SVLEN=-55 TR:VR 19:7 15:0 chr3 100877473 d_869 A . Too_small_size END=100877519;SVTYPE=DEL;SVLEN=-46 TR:VR 26:3 13:0 chr3 87961029 d_862 C . PASS END=87962409;SVTYPE=DEL;SVLEN=-1380 TR:VR 19:6 16:0 chr4 31658487 d_921 C . Too_small_size END=31658524;SVTYPE=DEL;SVLEN=-37 TR:VR 17:4 18:0 chr4 89331239 d_954 G . PASS END=89333919;SVTYPE=DEL;SVLEN=-2680 TR:VR 34:4 20:0 chr5 19545757 d_987 C . PASS END=19546155;SVTYPE=DEL;SVLEN=-398 TR:VR 25:10 17:0 chr6 32521742 i_583 C . PASS END=32521742;SVTYPE=INS;SVINSLEN=494;SVINSSEQ=AGGATACAGAAGATTCTTTTTGTTTGTTTTTCTAATATATATATATATATATATAATTATTATTATTATACTTTAAGTTCTAGGATACATGTGCACAACGTGCAGGTTTGTTACATATGTACACATGTGTCATGTTGGTATGCTGCACCCATTAACTAGTCATTTACATTAGGTATATCTCCTAATGCTATCACTCCCTGCTCCCCCCACCCCACGACAGGCCCCTGTGTGTGATGTTCCCCTTCCTGTGTCCATGTGTTCTCATTGTTCAATTCCCACCTATGAGTGAGAACAAGTGGTGTTTGGTTTTCTGTCCTTGTGATAGTTTGCTGAGAATGATGGTTTCCAGCTGCATCCATGTCCCTACAAAGGACATGAACTGACACTATTCACAATAGCAAAGACTTGGAATTAACCCTAATGTCCATCAATGATAGACTGGATTAAGACAATGTGGCACCTATACACCAGGGAATACTACGCAGCCATAAGAA TR:VR 36:6 18:0 chr8 136442309 d_1175 A . PASS END=136442386;SVTYPE=DEL;SVLEN=-77 TR:VR 39:16 19:0 chr8 58803358 d_1146 C . PASS END=58803479;SVTYPE=DEL;SVLEN=-121 TR:VR 49:12 19:0 chr9 1617974 d_1192 T . Too_small_size END=1618012;SVTYPE=DEL;SVLEN=-38 TR:VR 68:13 21:0 chr9 98784239 r_804 C . PASS END=99404609;SVTYPE=DUP;SVLEN=620370 TR:VR 74:16 36:0 chr10 19319789 r_89_0 C C]chr4:95716860] . Too_low_VAF SVTYPE=BND;MATEID=r_89_1 TR:VR 95:4 37:0 chr4 95716860 r_89_1 T T]chr10:19319789] . Too_low_VAF SVTYPE=BND;MATEID=r_89_0 TR:VR 95:4 37:0 chr11 118014139 r_174_0 A A[chr8:118982967[ . PASS SVTYPE=BND;MATEID=r_174_1 TR:VR 80:22 46:0 chr8 118982967 r_174_1 C ]chr11:118014139]C . PASS SVTYPE=BND;MATEID=r_174_0 TR:VR 80:22 46:0 chr11 72225355 d_202 C . Too_small_size END=72225391;SVTYPE=DEL;SVLEN=-36 TR:VR 26:14 19:0 chr14 97596858 r_258_0 T T[chr4:50845527[ . Too_low_VAF SVTYPE=BND;MATEID=r_258_1 TR:VR 283:6 57:0 chr4 50845527 r_258_1 A ]chr14:97596858]A . Too_low_VAF SVTYPE=BND;MATEID=r_258_0 TR:VR 283:6 57:0 chr15 74666771 r_287_0 T T]chr15:75278038] . PASS SVTYPE=BND;MATEID=r_287_1 TR:VR 80:7 50:0 chr15 75278038 r_287_1 T T]chr15:74666771] . PASS SVTYPE=BND;MATEID=r_287_0 TR:VR 80:7 50:0 chr17 74912473 r_352 C . PASS END=74929840;SVTYPE=DUP;SVLEN=17367 TR:VR 76:12 31:0 chr18 2647816 r_358_0 G ]chr8:140468753]T . PASS SVTYPE=BND;MATEID=r_358_1 TR:VR 68:15 28:0 chr8 140468753 r_358_1 T T[chr18:2647816[ . PASS SVTYPE=BND;MATEID=r_358_0 TR:VR 68:15 28:0 chr2 193558167 r_458_0 A [chrX:149289681[T . PASS SVTYPE=BND;MATEID=r_458_1 TR:VR 65:4 30:0 chrX 149289681 r_458_1 T [chr2:193558167[T . PASS SVTYPE=BND;MATEID=r_458_0 TR:VR 65:4 30:0 chr2 51133093 r_416 T . PASS END=51133978;SVTYPE=DUP;SVLEN=885 TR:VR 32:3 20:0 chr20 15358164 i_400 A . PASS END=15358164;SVTYPE=INS;SVINSLEN=520;SVINSSEQ=TGGTAAAAGGTGTGGTTAAGAGGGCATCCTTAACTACATGTTACCCTTGCAGAATCTTAACAGTTGAGAAGCTTTAGCTTACAGATGCCAATAAAAACATAAGGTTAATTGACAAGAGAGGAGAGAGTCATGGGACTCCTCCCAGCAGGGTAGAAATTTTTAGAGGGTTATTAAGAATAAAATGAAATAAATAAAAATTGATGGGGTTAAAACAGAAGTTTAATAGAACACTATTGAATATAGGATGAACCAAAGGGAGCTCCTGCTGGTCCCCCAACATTAAAGGGACACAAATCAACTTTCTGTGCTTAACTCAAATGGGAGAAATTTTTTAAAAATAAAAAGGCAAAATTACAATGAGAAAGCTGACATTGTGTGGGGCATTGTCGAGGCATGTTAATCAAGATAAAGACTGACAAAAGGGCCTGGGTCCTTTGGCTCAACCCTCTGTTGGGAGCCCAAATTATTTTTCACAAGGAAGGGTAAAATGGACTGGAGGTGGAAAAGATATTCAGTCACT TR:VR 35:5 23:0 chr21 22892250 d_780 C . PASS END=22892298;SVTYPE=DEL;SVLEN=-48 TR:VR 25:7 18:0 chr3 88250743 d_863 T . PASS END=88250951;SVTYPE=DEL;SVLEN=-208 TR:VR 22:9 14:0 chr4 31714026 r_598_0 A ATATCTTCCCTAA]chr5:179706038] . PASS SVTYPE=BND;MATEID=r_598_1;SVINSLEN=12;SVINSSEQ=TATCTTCCCTAA TR:VR 51:8 37:0 chr5 179706038 r_598_1 A ATTAGGGAAGATA]chr4:31714026] . PASS SVTYPE=BND;MATEID=r_598_0;SVINSLEN=12;SVINSSEQ=TTAGGGAAGATA TR:VR 51:8 37:0 chr4 90747754 r_620 A . PASS END=90945273;SVTYPE=DEL;SVLEN=-197519 TR:VR 56:14 40:0 chr5 20512091 d_988 C . PASS END=20512177;SVTYPE=DEL;SVLEN=-86 TR:VR 32:6 21:0 chr6 12128981 d_1042 T . PASS END=12130443;SVTYPE=DEL;SVLEN=-1462 TR:VR 40:9 14:0 chr6 32526032 r_681_0 T T]chr8:46312317] . PASS SVTYPE=BND;MATEID=r_681_1 TR:VR 79:5 45:1 chr8 46312317 r_681_1 A A]chr6:32526032] . PASS SVTYPE=BND;MATEID=r_681_0 TR:VR 79:5 45:1 chr8 136607672 d_1176 A . PASS END=136607979;SVTYPE=DEL;SVLEN=-307 TR:VR 31:4 18:0 chr8 60949095 r_751 T . PASS END=60954928;SVTYPE=DUP;SVLEN=5833 TR:VR 54:10 10:0 chr9 1692122 r_782 T . PASS END=1701617;SVTYPE=DEL;SVLEN=-9495 TR:VR 90:5 13:0 chr9 98811719 d_1228 G . PASS END=98811787;SVTYPE=DEL;SVLEN=-68 TR:VR 46:20 20:0 chr1 23702872 d_20 G . PASS END=23703035;SVTYPE=DEL;SVLEN=-163 TR:VR 25:11 16:0 chr1 75913042 d_37 A . PASS END=75913611;SVTYPE=DEL;SVLEN=-569 TR:VR 13:3 21:0 chr14 98833301 d_312 A . PASS END=98833484;SVTYPE=DEL;SVLEN=-183 TR:VR 62:11 20:0 chr15 74949233 r_288_0 C C[chr20:47205738[ . PASS SVTYPE=BND;MATEID=r_288_1 TR:VR 57:13 35:0 chr20 47205738 r_288_1 C ]chr15:74949233]C . PASS SVTYPE=BND;MATEID=r_288_0 TR:VR 57:13 35:0 chr18 2673723 r_359_0 C C[chr8:140468388[ . PASS SVTYPE=BND;MATEID=r_359_1 TR:VR 64:15 20:0 chr8 140468388 r_359_1 T ]chr18:2673723]T . PASS SVTYPE=BND;MATEID=r_359_0 TR:VR 64:15 20:0 chr20 16733370 d_703 A . PASS END=16737876;SVTYPE=DEL;SVLEN=-4506;SVINSLEN=1;SVINSSEQ=C TR:VR 43:3 26:0 chr21 24391385 d_781 G . PASS END=24393563;SVTYPE=DEL;SVLEN=-2178 TR:VR 25:8 17:0 chr5 22724968 d_989 A . PASS END=22725015;SVTYPE=DEL;SVLEN=-47 TR:VR 30:12 9:0 chr6 123459760 d_1071 T . PASS END=123459812;SVTYPE=DEL;SVLEN=-52 TR:VR 23:11 20:0 chr6 32555181 r_682_0 T T]chr6:134605418] . Too_low_VAF SVTYPE=BND;MATEID=r_682_1 TR:VR 64:3 54:0 chr6 134605418 r_682_1 C C]chr6:32555181] . Too_low_VAF SVTYPE=BND;MATEID=r_682_0 TR:VR 64:3 54:0 chr8 136758630 i_696 C . PASS END=136758641;SVTYPE=INS;SVINSLEN=250;SVINSSEQ=ACACTGCTTTAAATGTGTCCCAGAGATTCTGGTACATTGTGTCTTTGTTACCATTGGTTTCAAAGAACTTCTTTATTTCTGCCTTCATTTCCTTAATTACCCAGTAGTCATTCAAGAGCAGGTTGTTCAGTTTCCATATAGTTGGGCGGTTTTGAGTGAGTTTCTTAATCCTGAGTTCTAATTTGATTGCACTGTGGTCTGAGAGACAGTTTGTTGTGATTTCTGTACTTTTACATTTGCTGAGGAGTGC TR:VR 43:17 19:0 chr9 9882577 r_789 G . PASS END=9910737;SVTYPE=DUP;SVLEN=28160 TR:VR 83:5 32:0 chrX 22242919 i_782 G . PASS END=22242919;SVTYPE=INS;SVINSLEN=90;SVINSSEQ=AAAAAACTTACTTTAAATTTATCAAACTCCGTCAAAAGCGGCAAAGGGTAAATACACAACAATGTAATGTGAAAAAAAAAAAAAAAAAAA TR:VR 16:6 19:0 chr10 21943944 r_90_0 A ]chrX:142190769]T . PASS SVTYPE=BND;MATEID=r_90_1 TR:VR 88:7 33:0 chrX 142190769 r_90_1 T T[chr10:21943944[ . PASS SVTYPE=BND;MATEID=r_90_0 TR:VR 88:7 33:0 chr10 43404143 r_111 A . PASS END=43409970;SVTYPE=DUP;SVLEN=5827 TR:VR 36:9 13:0 chr11 118543867 r_176 C . PASS END=118892968;SVTYPE=DUP;SVLEN=349101 TR:VR 65:15 50:0 chr11 72677232 r_155 A . PASS END=72687535;SVTYPE=DUP;SVLEN=10303 TR:VR 41:8 26:0 chr15 76524231 d_404 T . Too_small_size END=76524269;SVTYPE=DEL;SVLEN=-38 TR:VR 18:6 18:0 chr18 27571512 d_552 C . Too_small_size END=27571549;SVTYPE=DEL;SVLEN=-37 TR:VR 33:7 12:0 chr2 111404487 r_434_0 T [chr2:158916863[T . PASS SVTYPE=BND;MATEID=r_434_1 TR:VR 58:6 32:0 chr2 158916863 r_434_1 T [chr2:111404487[T . PASS SVTYPE=BND;MATEID=r_434_0 TR:VR 58:6 32:0 chr2 54108649 r_418 G . PASS END=54136956;SVTYPE=DUP;SVLEN=28307 TR:VR 45:6 41:0 chr20 17092138 d_704 T . PASS END=17092238;SVTYPE=DEL;SVLEN=-100 TR:VR 27:8 13:0 chr20 32863512 d_751 C . PASS END=32866471;SVTYPE=DEL;SVLEN=-2959 TR:VR 52:10 14:0 chr21 24458866 d_782 T . PASS END=24459235;SVTYPE=DEL;SVLEN=-369 TR:VR 33:3 13:0 chr3 89185588 r_560 T . PASS END=89188558;SVTYPE=DUP;SVLEN=2970 TR:VR 29:3 14:0 chr4 35288959 r_600 T . PASS END=35299262;SVTYPE=DEL;SVLEN=-10303;SVINSLEN=3;SVINSSEQ=GTA TR:VR 33:8 15:0 chr4 91465051 r_621 C . PASS END=91478194;SVTYPE=DUP;SVLEN=13143 TR:VR 57:6 19:0 chr5 24959613 d_990 T . PASS END=24959662;SVTYPE=DEL;SVLEN=-49 TR:VR 23:4 10:0 chr7 130193592 r_737_0 C [chrX:30644232[GT . PASS SVTYPE=BND;MATEID=r_737_1;SVINSLEN=1;SVINSSEQ=G TR:VR 47:3 46:1 chrX 30644232 r_737_1 T [chr7:130193592[CT . PASS SVTYPE=BND;MATEID=r_737_0;SVINSLEN=1;SVINSSEQ=C TR:VR 47:3 46:1 chr8 67204147 d_1147 C . PASS END=67204319;SVTYPE=DEL;SVLEN=-172 TR:VR 35:7 13:0 chr9 99227806 r_805_0 A [chrX:142187641[C . Too_low_VAF SVTYPE=BND;MATEID=r_805_1 TR:VR 87:3 32:0 chrX 142187641 r_805_1 C [chr9:99227806[C . Too_low_VAF SVTYPE=BND;MATEID=r_805_0 TR:VR 87:3 32:0 chr1 7745620 r_5_0 T [chr3:112874565[TA . PASS SVTYPE=BND;MATEID=r_5_1;SVINSLEN=1;SVINSSEQ=T TR:VR 63:4 41:0 chr3 112874565 r_5_1 A [chr1:7745620[AA . PASS SVTYPE=BND;MATEID=r_5_0;SVINSLEN=1;SVINSSEQ=A TR:VR 63:4 41:0 chr10 25195519 r_91 A . PASS END=25201227;SVTYPE=DUP;SVLEN=5708 TR:VR 72:6 26:0 chr10 43404213 d_161 A . PASS END=43404676;SVTYPE=DEL;SVLEN=-463 TR:VR 29:11 11:0 chr11 119662806 d_209 T . PASS END=119662860;SVTYPE=DEL;SVLEN=-54 TR:VR 29:8 16:0 chr11 73290797 r_156 T . PASS END=73318534;SVTYPE=DEL;SVLEN=-27737 TR:VR 41:5 34:0 chr12 13570199 i_128 T . PASS END=13570199;SVTYPE=INS;SVINSLEN=2678;SVINSSEQ=TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGATTTTATCTCATTTTATTGTTATTTTTTTTTTTTTTTTTTTTTATTATACTTTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCAAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAACAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCAATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTCTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACTCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCAGTTTTCAAAGGGAATGCTTCCAGTTTTTGTCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAAT TR:VR 15:5 13:0 chr14 98951673 r_260_0 C ]chr16:34125429]T . PASS SVTYPE=BND;MATEID=r_260_1 TR:VR 81:6 40:0 chr16 34125429 r_260_1 T T[chr14:98951673[ . PASS SVTYPE=BND;MATEID=r_260_0 TR:VR 81:6 40:0 chr17 76378228 d_522 C . PASS END=76378386;SVTYPE=DEL;SVLEN=-158 TR:VR 40:3 20:0 chr18 29158589 r_368_0 T [chr18:29762232[C . PASS SVTYPE=BND;MATEID=r_368_1 TR:VR 85:18 33:0 chr18 29762232 r_368_1 C [chr18:29158589[C . PASS SVTYPE=BND;MATEID=r_368_0 TR:VR 85:18 33:0 chr2 111410081 r_435_0 A A]chr2:158926988] . PASS SVTYPE=BND;MATEID=r_435_1 TR:VR 71:5 33:0 chr2 158926988 r_435_1 T T]chr2:111410081] . PASS SVTYPE=BND;MATEID=r_435_0 TR:VR 71:5 33:0 chr2 54146970 d_627 T . PASS END=54147134;SVTYPE=DEL;SVLEN=-164 TR:VR 25:9 27:0 chr20 17323163 d_705 C . PASS END=17323734;SVTYPE=DEL;SVLEN=-571 TR:VR 28:10 14:0 chr20 34010136 d_752 T . PASS END=34012746;SVTYPE=DEL;SVLEN=-2610;SVINSLEN=3;SVINSSEQ=GCA TR:VR 44:14 22:0 chr4 91557851 r_622 A . PASS END=134386497;SVTYPE=DUP;SVLEN=42828646;SVINSLEN=1;SVINSSEQ=T TR:VR 72:10 40:0 chr6 32587397 r_683_0 A [chr8:58198565[AAAAAAAGAAAAGGAAT . PASS SVTYPE=BND;MATEID=r_683_1;SVINSLEN=16;SVINSSEQ=AAAAAAAGAAAAGGAA TR:VR 93:5 53:1 chr8 58198565 r_683_1 T [chr6:32587397[TTCCTTTTCTTTTTTTT . PASS SVTYPE=BND;MATEID=r_683_0;SVINSLEN=16;SVINSSEQ=TTCCTTTTCTTTTTTT TR:VR 93:5 53:1 chr7 134688189 d_1116 A . PASS END=134688342;SVTYPE=DEL;SVLEN=-153 TR:VR 17:9 9:0 chr8 68823906 r_753 A . PASS END=82048264;SVTYPE=DUP;SVLEN=13224358 TR:VR 88:6 43:0 chr9 20373696 d_1202 T . Too_small_size END=20373742;SVTYPE=DEL;SVLEN=-46 TR:VR 35:12 14:0 chr10 45712389 d_162 T . PASS END=45712783;SVTYPE=DEL;SVLEN=-394 TR:VR 29:6 18:0 chr11 734886 d_186 T . PASS END=734962;SVTYPE=DEL;SVLEN=-76;SVINSLEN=23;SVINSSEQ=CTGAGTGGGCGCCATTGCCGGAG TR:VR 30:4 21:0 chr14 106548884 r_266 G . PASS END=106599725;SVTYPE=DUP;SVLEN=50841 TR:VR 53:3 37:0 chr14 98952997 r_261_0 T T]chr14:98954311] . PASS SVTYPE=BND;MATEID=r_261_1 TR:VR 56:3 22:0 chr14 98954311 r_261_1 T T]chr14:98952997] . PASS SVTYPE=BND;MATEID=r_261_0 TR:VR 56:3 22:0 chr15 89870242 d_405 C . PASS END=89870317;SVTYPE=DEL;SVLEN=-75 TR:VR 17:5 26:0 chr2 55003529 r_419 G . PASS END=55016857;SVTYPE=DUP;SVLEN=13328 TR:VR 43:3 20:0 chr20 1864615 r_476 G . PASS END=1880520;SVTYPE=DUP;SVLEN=15905 TR:VR 56:11 33:0 chr5 258740 d_976 C . PASS END=259184;SVTYPE=DEL;SVLEN=-444 TR:VR 24:3 14:0 chr6 126485745 r_694 A . PASS END=126489193;SVTYPE=DUP;SVLEN=3448 TR:VR 33:3 10:0 chr7 13603072 r_705 A . PASS END=109288667;SVTYPE=DUP;SVLEN=95685595 TR:VR 52:10 24:0 chr8 138066474 i_699 G . Too_small_size END=138066474;SVTYPE=INS;SVINSLEN=49;SVINSSEQ=ATATATATATATATTCCTTGATATATATATATATATATATATATATATA TR:VR 32:3 16:0 chr8 74366221 i_682 T . PASS END=74366222;SVTYPE=INS;SVINSLEN=458;SVINSSEQ=GTATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCACTGTCAAAATTCTTAATTTATTTTAAAATTTTTTTTACAATGATAATAATGAATTTCAGTTTTTTAAATTACTTAATGGAGATTATCTAGTTGGAGGTATTATGATGCCAGTTTCATGGAAGAATATGCCCTGAATTCATCCCAAATTTGAAGAGAAAAAATACTATACCCCACTGCTGCCAGAATATTTCACTTGTGACCAAAAAAAAAAAAAAAAAGAAAAGAAAAAAACTCACCGAGCAAGGCTGGGACATCTAGTGGTCATTGTATCCTAAACAAACACCTTAAAAGCACAAACTCAAGTATCCATGAAATACATGAAATTCCATCTCTACAAAAAAAATACAAAAAAAAATAGCCACTACACCTGGCTATTTTTTTTTGTATTTTTTTTGTAGAGATGGAATTTCATGT TR:VR 42:6 22:0 chr9 20399470 d_1203 A . PASS END=20399544;SVTYPE=DEL;SVLEN=-74 TR:VR 47:12 9:0 chr1 143262373 d_78 G . PASS END=143262818;SVTYPE=DEL;SVLEN=-445 TR:VR 93:5 37:1 chr1 8011882 r_6 A . PASS END=8308709;SVTYPE=DUP;SVLEN=296827 TR:VR 78:4 47:0 chr10 45803339 r_112 A . PASS END=45809804;SVTYPE=DUP;SVLEN=6465 TR:VR 38:3 17:0 chr11 122016685 d_210 G . PASS END=122016736;SVTYPE=DEL;SVLEN=-51;SVINSLEN=21;SVINSSEQ=TGTATATACATAAGTGCGTAT TR:VR 39:3 12:0 chr12 21427279 d_226 G . PASS END=21427335;SVTYPE=DEL;SVLEN=-56 TR:VR 17:6 26:0 chr14 99179191 d_313 T . PASS END=99179370;SVTYPE=DEL;SVLEN=-179 TR:VR 45:9 20:0 chr15 96527029 d_406 C . Too_small_size END=96527066;SVTYPE=DEL;SVLEN=-37 TR:VR 19:10 18:0 chr17 78834557 r_354 C . PASS END=78844771;SVTYPE=DUP;SVLEN=10214 TR:VR 52:4 21:0 chr2 199637457 d_683 A . PASS END=199637537;SVTYPE=DEL;SVLEN=-80 TR:VR 32:5 22:0 chr21 29363487 r_501_0 A A]chr21:40730154] . PASS SVTYPE=BND;MATEID=r_501_1 TR:VR 63:4 44:0 chr21 40730154 r_501_1 C C]chr21:29363487] . PASS SVTYPE=BND;MATEID=r_501_0 TR:VR 63:4 44:0 chr4 39869 r_586_0 C [chr7:99953253[CA . PASS SVTYPE=BND;MATEID=r_586_1;SVINSLEN=1;SVINSSEQ=C TR:VR 78:11 84:0 chr7 99953253 r_586_1 A [chr4:39869[GA . PASS SVTYPE=BND;MATEID=r_586_0;SVINSLEN=1;SVINSSEQ=G TR:VR 78:11 84:0 chr4 91864167 r_623_0 A [chr4:96443224[T . PASS SVTYPE=BND;MATEID=r_623_1 TR:VR 98:8 32:0 chr4 96443224 r_623_1 T [chr4:91864167[T . PASS SVTYPE=BND;MATEID=r_623_0 TR:VR 98:8 32:0 chr5 25936744 d_991 G . PASS END=25937290;SVTYPE=DEL;SVLEN=-546 TR:VR 25:8 12:0 chr6 128105013 r_695 A . PASS END=128111673;SVTYPE=DUP;SVLEN=6660 TR:VR 33:8 19:0 chr7 63140158 r_718 C . PASS END=157468211;SVTYPE=DUP;SVLEN=94328053 TR:VR 60:3 36:0 chr8 77167877 i_683 T . PASS END=77167877;SVTYPE=INS;SVINSLEN=1563;SVINSSEQ=TATATTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATTATTATTATTATTATTATTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCAAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTTTAACGTTTAAGTCTTTAATCCCATCGACCTGCGATGGGAGGAGCCAAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTGAGGTACCGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGCCAGTGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATTGCCTCACCTGGGAAGCGCAAGGGGTCAGGGAGTTCCCTTTCCGAGTCAAAGAAAGGGGTGACGGACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATTGCGCTTTTCAGACCGGCTTAAGAAACGGCGCACCACGAGACT TR:VR 51:4 16:0 chr9 22207037 d_1204 C . Too_small_size END=22207077;SVTYPE=DEL;SVLEN=-40 TR:VR 46:4 20:0 chrX 26232330 d_1359 A . Too_small_size END=26232368;SVTYPE=DEL;SVLEN=-38 TR:VR 15:6 21:0 chr1 143925132 d_79 A . PASS END=143925207;SVTYPE=DEL;SVLEN=-75 TR:VR 62:7 42:1 chr1 24508738 d_21 C . PASS END=24509023;SVTYPE=DEL;SVLEN=-285 TR:VR 17:7 20:0 chr10 26581755 r_92_0 C [chr10:26935699[CACTCTTATTCCAGCCCGGGTGTGGAGAGGCGGCCATCCTTGGCGGGATCA . PASS SVTYPE=BND;MATEID=r_92_1;SVINSLEN=50;SVINSSEQ=CACTCTTATTCCAGCCCGGGTGTGGAGAGGCGGCCATCCTTGGCGGGATC TR:VR 115:6 48:1 chr10 26935699 r_92_1 A [chr10:26581755[GATCCCGCCAAGGATGGCCGCCTCTCCACACCCGGGCTGGAATAAGAGTGA . PASS SVTYPE=BND;MATEID=r_92_0;SVINSLEN=50;SVINSSEQ=GATCCCGCCAAGGATGGCCGCCTCTCCACACCCGGGCTGGAATAAGAGTG TR:VR 115:6 48:1 chr10 46280962 d_163 T . Too_small_size END=46280997;SVTYPE=DEL;SVLEN=-35 TR:VR 27:5 20:0 chr11 73714655 r_157_0 C C[chr12:112603614[ . PASS SVTYPE=BND;MATEID=r_157_1 TR:VR 40:3 30:0 chr12 112603614 r_157_1 C ]chr11:73714655]C . PASS SVTYPE=BND;MATEID=r_157_0 TR:VR 40:3 30:0 chr12 21760115 d_227 T . PASS END=21760443;SVTYPE=DEL;SVLEN=-328 TR:VR 13:4 16:0 chr13 114007250 d_282 C . PASS END=114007287;SVTYPE=INS;SVINSLEN=168;SVINSSEQ=TTCTCCCCTCCTGCCCTGCCGGACACCACCTTACCCCTTCTCCCCTCCTGCCCTGCTGGATGCCACCTTACCCTTCTCCCCCTCCTGCCCTGCCGGACACCACCTTACCCTTCTCCCCTCCTGCCCTGCCGGATGCCACACCTTACCCTTTCTCTCCCCCTCCTGCCC TR:VR 25:3 10:0 chr18 31260521 r_369_0 A A[chr3:138169412[ . PASS SVTYPE=BND;MATEID=r_369_1 TR:VR 76:7 32:0 chr3 138169412 r_369_1 A ]chr18:31260521]A . PASS SVTYPE=BND;MATEID=r_369_0 TR:VR 76:7 32:0 chr19 21750027 r_386 T . Too_low_VAF END=22771714;SVTYPE=DEL;SVLEN=-1021687;SVINSLEN=10;SVINSSEQ=TTTTTTTTTT TR:VR 80:3 38:1 chr2 112297429 i_359 G . PASS END=112297429;SVTYPE=INS;SVINSLEN=103;SVINSSEQ=TTACCTTTCTGCATGTACTATTTGTAGTAGTTTGCACTTTTTCAAACTATAGTGTTTTGGAAGTATGATTAAATGTTAAAATTGTTTTATGTATTCATCTTTT TR:VR 26:7 13:0 chr2 200108919 r_462 T . PASS END=200115360;SVTYPE=DUP;SVLEN=6441 TR:VR 52:9 13:0 chr20 18996856 d_706 T . PASS END=18996912;SVTYPE=DEL;SVLEN=-56 TR:VR 21:10 10:0 chr20 34046366 r_482_0 G G]chr20:47205729] . PASS SVTYPE=BND;MATEID=r_482_1 TR:VR 74:9 35:0 chr20 47205729 r_482_1 T T]chr20:34046366] . PASS SVTYPE=BND;MATEID=r_482_0 TR:VR 74:9 35:0 chr21 32040040 r_502_0 G [chr21:32952261[CTACAACTTGAGGCTACTTGAC . PASS SVTYPE=BND;MATEID=r_502_1;SVINSLEN=21;SVINSSEQ=CTACAACTTGAGGCTACTTGA TR:VR 39:8 58:0 chr21 32952261 r_502_1 C [chr21:32040040[TCAAGTAGCCTCAAGTTGTAGC . PASS SVTYPE=BND;MATEID=r_502_0;SVINSLEN=21;SVINSSEQ=TCAAGTAGCCTCAAGTTGTAG TR:VR 39:8 58:0 chr4 41012802 r_602 A . PASS END=42104095;SVTYPE=DUP;SVLEN=1091293 TR:VR 42:5 34:0 chr4 91888216 r_624_0 G G]chr4:91890156] . PASS SVTYPE=BND;MATEID=r_624_1 TR:VR 42:5 18:0 chr4 91890156 r_624_1 T T]chr4:91888216] . PASS SVTYPE=BND;MATEID=r_624_0 TR:VR 42:5 18:0 chr5 27478588 d_992 T . Too_small_size END=27478624;SVTYPE=DEL;SVLEN=-36 TR:VR 33:13 13:0 chr6 135893894 r_696 A . PASS END=135898035;SVTYPE=DUP;SVLEN=4141;SVINSLEN=1;SVINSSEQ=T TR:VR 39:5 17:0 chr8 140031522 d_1177 C . Too_small_size END=140031558;SVTYPE=DEL;SVLEN=-36 TR:VR 47:12 23:0 chr8 78421636 d_1148 T . PASS END=78422271;SVTYPE=DEL;SVLEN=-635 TR:VR 45:13 23:0 chr1 245786567 d_102 T . PASS END=245786645;SVTYPE=DEL;SVLEN=-78 TR:VR 25:6 11:0 chr1 81188400 r_27 A . PASS END=81786549;SVTYPE=DEL;SVLEN=-598149 TR:VR 42:6 30:0 chr10 46520814 d_164 A . PASS END=46521453;SVTYPE=DEL;SVLEN=-639 TR:VR 69:5 32:0 chr11 73985291 r_158_0 T [chr11:74005256[AATT . PASS SVTYPE=BND;MATEID=r_158_1;SVINSLEN=3;SVINSSEQ=AAT TR:VR 43:6 35:0 chr11 74005256 r_158_1 T [chr11:73985291[ATTT . PASS SVTYPE=BND;MATEID=r_158_0;SVINSLEN=3;SVINSSEQ=ATT TR:VR 43:6 35:0 chr14_GL000225v1_random 98167 d_352 T . Too_low_VAF END=99233;SVTYPE=DEL;SVLEN=-1066;SVINSLEN=41;SVINSSEQ=AAAAGTTGTCTAAGCTTTGCCTACAGTGGGATTTATGACAT TR:VR 624:6 551:1 chr18 32229214 r_370 T . PASS END=35350658;SVTYPE=DEL;SVLEN=-3121444 TR:VR 65:16 23:0 chr19 23815101 r_387_0 C CA[chr8:103168347[ . PASS SVTYPE=BND;MATEID=r_387_1;SVINSLEN=1;SVINSSEQ=A TR:VR 63:4 33:0 chr8 103168347 r_387_1 C ]chr19:23815101]TC . PASS SVTYPE=BND;MATEID=r_387_0;SVINSLEN=1;SVINSSEQ=T TR:VR 63:4 33:0 chr2 200351191 r_463_0 T TGGATAGCTTTG]chr9:98887981] . PASS SVTYPE=BND;MATEID=r_463_1;SVINSLEN=11;SVINSSEQ=GGATAGCTTTG TR:VR 80:4 42:0 chr9 98887981 r_463_1 T TCAAAGCTATCC]chr2:200351191] . PASS SVTYPE=BND;MATEID=r_463_0;SVINSLEN=11;SVINSSEQ=CAAAGCTATCC TR:VR 80:4 42:0 chr2 64121168 d_628 G . PASS END=64121266;SVTYPE=DEL;SVLEN=-98 TR:VR 25:8 25:0 chr20 19365992 r_480 C . PASS END=19368573;SVTYPE=DUP;SVLEN=2581 TR:VR 38:7 18:0 chr21 32924850 i_449 G . PASS END=32924850;SVTYPE=INS;SVINSLEN=104;SVINSSEQ=TGCTTGGAAACAGGAGATGTGCCTTCTCTTTTCTCTGTCTTCCCCTTTCCTCTTTGGGAAGCAATTTGTATCTTACGGTTTCAAAATCATTCTCTCACATGATT TR:VR 22:7 24:0 chr22 12033907 d_806 T . PASS END=12035538;SVTYPE=DEL;SVLEN=-1631;SVINSLEN=3;SVINSSEQ=TTT TR:VR 25:7 21:0 chr4 41499354 d_923 A . PASS END=41499968;SVTYPE=DEL;SVLEN=-614 TR:VR 21:5 17:0 chr6 142335547 d_1072 G . PASS END=142335691;SVTYPE=DEL;SVLEN=-144 TR:VR 25:10 14:0 chr7 140166431 d_1117 C . PASS END=140166536;SVTYPE=DEL;SVLEN=-105 TR:VR 26:17 14:0 chr8 78592931 r_754_0 A [chr8:113109024[TTTTTTTGCCATTATCATTTCTAC . PASS SVTYPE=BND;MATEID=r_754_1;SVINSLEN=23;SVINSSEQ=TTTTTTTGCCATTATCATTTCTA TR:VR 88:8 37:0 chr8 113109024 r_754_1 C [chr8:78592931[TAGAAATGATAATGGCAAAAAAAC . PASS SVTYPE=BND;MATEID=r_754_0;SVINSLEN=23;SVINSSEQ=TAGAAATGATAATGGCAAAAAAA TR:VR 88:8 37:0 chrX 39676652 r_823 C . PASS END=39704797;SVTYPE=DEL;SVLEN=-28145 TR:VR 23:11 38:0 chr1 8358432 r_7_0 T T]chr4:131712496] . PASS SVTYPE=BND;MATEID=r_7_1 TR:VR 74:12 36:0 chr4 131712496 r_7_1 C C]chr1:8358432] . PASS SVTYPE=BND;MATEID=r_7_0 TR:VR 74:12 36:0 chr11 7428749 r_137 G . PASS END=7464321;SVTYPE=DEL;SVLEN=-35572 TR:VR 33:15 28:0 chr12 2255781 i_123 A . PASS END=2255781;SVTYPE=INS;SVINSLEN=179;SVINSSEQ=TCACACTATCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAATCACACGATCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACAATCACACGACCCTGACCTTACTAGTTTACAATCACACGACCCTGACCTGACTAGTTTACA TR:VR 45:10 21:0 chr16 11631747 d_414 A . Too_small_size END=11631785;SVTYPE=DEL;SVLEN=-38 TR:VR 31:8 12:0 chr18 33186224 d_554 T . Too_small_size END=33186260;SVTYPE=DEL;SVLEN=-36 TR:VR 28:18 13:0 chr2 119310683 d_660 C . Too_small_size END=119310718;SVTYPE=DEL;SVLEN=-35 TR:VR 37:9 17:0 chr20 206331 r_475_0 A [chr21:44014244[A . PASS SVTYPE=BND;MATEID=r_475_1 TR:VR 39:5 45:0 chr21 44014244 r_475_1 A [chr20:206331[A . PASS SVTYPE=BND;MATEID=r_475_0 TR:VR 39:5 45:0 chr20 37141567 r_483 C . PASS END=37173755;SVTYPE=DUP;SVLEN=32188 TR:VR 58:9 33:0 chr22 12309570 d_807 G . Too_small_size END=12309608;SVTYPE=DEL;SVLEN=-38 TR:VR 99:5 57:0 chr4 42082160 r_603 T . PASS END=42085758;SVTYPE=DUP;SVLEN=3598 TR:VR 31:6 24:0 chr5 31265163 d_993 T . PASS END=31274700;SVTYPE=DEL;SVLEN=-9537 TR:VR 40:3 31:0 chr6 3616474 r_670 G . PASS END=3627006;SVTYPE=DUP;SVLEN=10532 TR:VR 29:5 26:0 chr8 142008072 d_1178 A . PASS END=142008101;SVTYPE=INS;SVINSLEN=40;SVINSSEQ=CACACACCTGGACATGTCACACACACCTGGACATTTCCAC TR:VR 27:10 21:0 chr8 78606234 d_1149 T . Too_small_size END=78606273;SVTYPE=DEL;SVLEN=-39;SVINSLEN=1;SVINSSEQ=A TR:VR 53:3 18:0 chrX 46488117 d_1360 G . PASS END=46488197;SVTYPE=DEL;SVLEN=-80 TR:VR 17:9 14:0 chr1 91390962 d_40 C . PASS END=91391738;SVTYPE=DEL;SVLEN=-776 TR:VR 16:8 15:0 chr11 124727776 r_177 T . PASS END=124735755;SVTYPE=DUP;SVLEN=7979;SVINSLEN=2;SVINSSEQ=TC TR:VR 45:4 29:0 chr17 80560272 r_355 T . PASS END=80565141;SVTYPE=DUP;SVLEN=4869 TR:VR 55:8 18:0 chr18 33694112 d_555 A . PASS END=33694574;SVTYPE=DEL;SVLEN=-462 TR:VR 28:12 19:0 chr19 24293263 i_324 A . PASS END=24293263;SVTYPE=INS;SVINSLEN=270;SVINSSEQ=CTCGTCTCACATAATTAAACCTTTCTTTTCATTCAGCAGTTTAGGAACACTGTATTTTTAGAATCAGCAAATAGATATTTGGGAGTGCATTGAGGCCCAAATACACTATGGCAAAAAAAAAAGTGCATTGAGCACTTTGGGAAGACTGTTTTTACAGAATCTGCAAAAGGATATTCGGGAGTGCTTTGAGGCCTATATGGTGAAAAGGGAAATATCTTCAGATAAATCTAGAAAAAAACATTGTGAGAAACTGCTTTGTGATATGTGTAT TR:VR 52:5 22:0 chr2 119513861 r_437_0 A A]chr2:176622381] . PASS SVTYPE=BND;MATEID=r_437_1 TR:VR 74:7 33:0 chr2 176622381 r_437_1 T T]chr2:119513861] . PASS SVTYPE=BND;MATEID=r_437_0 TR:VR 74:7 33:0 chr2 204291310 r_464_0 G G]chr2:204607292] . PASS SVTYPE=BND;MATEID=r_464_1 TR:VR 60:5 29:0 chr2 204607292 r_464_1 T T]chr2:204291310] . PASS SVTYPE=BND;MATEID=r_464_0 TR:VR 60:5 29:0 chr20 21157095 i_401 T . PASS END=21157095;SVTYPE=INS;SVINSLEN=553;SVINSSEQ=AAAAAAAAAATTGTTTAGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAATAACAATAAAATGAGATAAAATCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA TR:VR 30:6 18:0 chr20 37304816 r_484 A . PASS END=41746207;SVTYPE=DEL;SVLEN=-4441391 TR:VR 57:7 28:0 chr21 33623161 r_503 T . PASS END=34185370;SVTYPE=DEL;SVLEN=-562209;SVINSLEN=23;SVINSSEQ=ATCTTGAGGGCTAAATGTACTAC TR:VR 44:6 30:0 chr4 42115137 r_604 T . PASS END=42410778;SVTYPE=DUP;SVLEN=295641 TR:VR 47:13 34:0 chr6 144449655 d_1073 A . PASS END=144450791;SVTYPE=DEL;SVLEN=-1136 TR:VR 21:10 18:0 chr8 142008081 d_1179 C . PASS END=142008139;SVTYPE=DEL;SVLEN=-58;SVINSLEN=1;SVINSSEQ=G TR:VR 27:10 21:0 chr8 79992666 d_1150 A . PASS END=79992857;SVTYPE=DEL;SVLEN=-191 TR:VR 37:11 15:0 chr9 23800394 d_1207 T . PASS END=23800455;SVTYPE=DEL;SVLEN=-61 TR:VR 49:5 17:0 chr1 144103674 d_83 G . PASS END=144103960;SVTYPE=DEL;SVLEN=-286;SVINSLEN=49;SVINSSEQ=GTGGCTTGGCTGGCTGTGTGGCTGGCTGGCTTGGCTGGCTGTGGCTTGG TR:VR 106:11 51:1 chr1 91520976 d_41 C . PASS END=91521452;SVTYPE=DEL;SVLEN=-476 TR:VR 14:9 23:0 chr11 75074541 r_160 C . PASS END=75079286;SVTYPE=DUP;SVLEN=4745 TR:VR 35:3 24:0 chr13 16005404 d_252 G . Too_low_VAF END=16005510;SVTYPE=INS;SVINSLEN=108;SVINSSEQ=TGACCTACAGGGGAAAAAGAAATATCTTCACATAAAAACTAGACAGAAGCATTCTGAGAAACATCTTTGTGATGTGTGCATTCATCTCAAAGAGTTCAACCTTTCTTT TR:VR 142:3 41:1 chr16 13729676 r_295 T . PASS END=13737707;SVTYPE=DUP;SVLEN=8031 TR:VR 28:3 23:0 chr2 121038158 r_438 C . PASS END=121267277;SVTYPE=DUP;SVLEN=229119 TR:VR 49:3 38:0 chr2 204419589 r_465_0 G ]chr22:21690913]T . PASS SVTYPE=BND;MATEID=r_465_1 TR:VR 61:6 35:0 chr22 21690913 r_465_1 T T[chr2:204419589[ . PASS SVTYPE=BND;MATEID=r_465_0 TR:VR 61:6 35:0 chr2 70442744 r_421 A . PASS END=70461914;SVTYPE=DUP;SVLEN=19170 TR:VR 43:6 27:0 chr21 34837846 d_784 T . PASS END=34837978;SVTYPE=DEL;SVLEN=-132 TR:VR 22:10 15:0 chr22 16646729 d_809 A . PASS END=16646924;SVTYPE=DEL;SVLEN=-195 TR:VR 15:5 15:0 chr3 11080160 r_537 C . PASS END=11085484;SVTYPE=DUP;SVLEN=5324 TR:VR 62:10 29:0 chr3 94572594 d_867 T . PASS END=94572756;SVTYPE=DEL;SVLEN=-162 TR:VR 24:8 11:0 chr4 44174615 d_924 A . Too_small_size END=44174657;SVTYPE=DEL;SVLEN=-42 TR:VR 15:5 17:0 chr4 93848366 r_626_0 G [chr4:93858660[A . PASS SVTYPE=BND;MATEID=r_626_1 TR:VR 70:18 23:0 chr4 93858660 r_626_1 A [chr4:93848366[A . PASS SVTYPE=BND;MATEID=r_626_0 TR:VR 70:18 23:0 chr6 144478570 d_1074 G . Too_small_size END=144478605;SVTYPE=DEL;SVLEN=-35 TR:VR 15:7 18:0 chr7 144044967 d_1120 A . PASS END=144045921;SVTYPE=DEL;SVLEN=-954 TR:VR 38:21 17:0 chr7 65693651 d_1106 G . PASS END=65694429;SVTYPE=DEL;SVLEN=-778 TR:VR 17:9 17:0 chr9 24177075 d_1208 C . PASS END=24177124;SVTYPE=DEL;SVLEN=-49 TR:VR 39:5 14:0 chr1 149559901 d_84 T . PASS END=149560058;SVTYPE=DEL;SVLEN=-157 TR:VR 36:22 29:0 chr10 28605137 r_93 T . PASS END=28616436;SVTYPE=DUP;SVLEN=11299 TR:VR 80:5 20:0 chr10 5478437 r_76 C . PASS END=5532232;SVTYPE=DEL;SVLEN=-53795 TR:VR 97:8 30:0 chr11 126295080 r_178_0 C [chr8:36138546[T . PASS SVTYPE=BND;MATEID=r_178_1 TR:VR 44:3 32:0 chr8 36138546 r_178_1 T [chr11:126295080[T . PASS SVTYPE=BND;MATEID=r_178_0 TR:VR 44:3 32:0 chr11 75893137 r_161 A . PASS END=75896668;SVTYPE=DUP;SVLEN=3531 TR:VR 41:3 26:0 chr12 2959052 d_224 C . PASS END=2959109;SVTYPE=DEL;SVLEN=-57 TR:VR 39:10 22:0 chr13 16011041 d_253 G . Too_low_VAF END=16011158;SVTYPE=INS;SVINSLEN=119;SVINSSEQ=TGACCTACAGGGGAAAAAGAAATATCTTCACATAAAAACTAGACAGAAGCATTCTGAGAAACATCTTTGTGATGTGTGCATTCATCTCAAAGAGTTCAACCTTTCTTTTGATTGAGCAC TR:VR 165:5 40:1 chr18 36231938 d_556 A . PASS END=36231989;SVTYPE=DEL;SVLEN=-51 TR:VR 37:11 12:0 chr2 122170540 r_439 A . PASS END=122177429;SVTYPE=DUP;SVLEN=6889;SVINSLEN=4;SVINSSEQ=TTTG TR:VR 29:6 24:0 chr2 204606918 r_466_0 T [chr2:204609045[T . PASS SVTYPE=BND;MATEID=r_466_1 TR:VR 32:5 18:0 chr2 204609045 r_466_1 T [chr2:204606918[T . PASS SVTYPE=BND;MATEID=r_466_0 TR:VR 32:5 18:0 chr20 23447616 d_707 C . PASS END=23447722;SVTYPE=DEL;SVLEN=-106 TR:VR 25:7 15:0 chr20 38903060 r_486_0 A A]chr21:39325038] . PASS SVTYPE=BND;MATEID=r_486_1 TR:VR 49:6 33:0 chr21 39325038 r_486_1 T T]chr20:38903060] . PASS SVTYPE=BND;MATEID=r_486_0 TR:VR 49:6 33:0 chr21 35844494 d_785 G . PASS END=35844555;SVTYPE=DEL;SVLEN=-61 TR:VR 22:7 20:0 chr3 94652630 r_562 T . PASS END=94718036;SVTYPE=DUP;SVLEN=65406 TR:VR 57:4 43:0 chr4 94146639 r_627 G . Too_low_VAF END=94153839;SVTYPE=DUP;SVLEN=7200 TR:VR 103:3 18:0 chr5 36884698 d_995 T . PASS END=36885172;SVTYPE=DEL;SVLEN=-474 TR:VR 16:5 20:0 chr7 65757577 r_720 C . PASS END=65764128;SVTYPE=DUP;SVLEN=6551;SVINSLEN=3;SVINSSEQ=ATA TR:VR 33:5 30:0 chr8 83171507 d_1151 T . PASS END=83171613;SVTYPE=DEL;SVLEN=-106;SVINSLEN=8;SVINSSEQ=ATATATTT TR:VR 59:7 26:0 chr9 24714575 d_1209 A . PASS END=24714707;SVTYPE=DEL;SVLEN=-132 TR:VR 36:5 18:0 chrX 10681987 r_820 A . PASS END=11959815;SVTYPE=DUP;SVLEN=1277828 TR:VR 55:6 45:0 chr1 151849935 r_47 T . PASS END=151874020;SVTYPE=DUP;SVLEN=24085 TR:VR 82:19 27:0 chr10 28876827 r_94 G . PASS END=28887168;SVTYPE=DUP;SVLEN=10341 TR:VR 71:9 21:0 chr10 54983776 r_114 C . PASS END=54987474;SVTYPE=DUP;SVLEN=3698 TR:VR 27:5 19:0 chr11 76968584 r_162 C . PASS END=76977524;SVTYPE=DUP;SVLEN=8940 TR:VR 41:3 27:0 chr12 30780730 r_185_0 T ]chr17:30513216]C . PASS SVTYPE=BND;MATEID=r_185_1 TR:VR 53:9 41:0 chr17 30513216 r_185_1 C C[chr12:30780730[ . PASS SVTYPE=BND;MATEID=r_185_0 TR:VR 53:9 41:0 chr16 1601287 r_293_0 A ]chr9:252566]G . PASS SVTYPE=BND;MATEID=r_293_1 TR:VR 81:6 40:0 chr9 252566 r_293_1 G G[chr16:1601287[ . PASS SVTYPE=BND;MATEID=r_293_0 TR:VR 81:6 40:0 chr17 80804453 r_356 G . PASS END=80809932;SVTYPE=DUP;SVLEN=5479 TR:VR 54:8 18:0 chr18 37015513 d_557 A . Too_small_size END=37015554;SVTYPE=DEL;SVLEN=-41 TR:VR 39:10 18:0 chr2 72727183 r_422 T . PASS END=73116548;SVTYPE=DUP;SVLEN=389365 TR:VR 61:6 29:0 chr20 41333267 d_755 T . PASS END=41333380;SVTYPE=DEL;SVLEN=-113 TR:VR 25:12 20:0 chr3 113646648 d_872 C . Too_small_size END=113646688;SVTYPE=DEL;SVLEN=-40 TR:VR 34:3 16:0 chr3 9490847 r_534 A . PASS END=9503181;SVTYPE=DUP;SVLEN=12334 TR:VR 66:7 28:0 chr4 46053344 r_605 G . PASS END=46308303;SVTYPE=DEL;SVLEN=-254959 TR:VR 47:6 34:0 chr4 95434435 i_540 G . PASS END=95434435;SVTYPE=INS;SVINSLEN=123;SVINSSEQ=CCAGAGTGATTTTTCTAATGTGCCACTCTGATCGGGCCATCCACCTGCTCTTCCCACCGGCTCCTTAAGCCAGTGATTCAGTGATTTGCAAGGCTTTTCAGATCTGGACCGTTCTTCACTCTC TR:VR 66:8 17:0 chr6 1496927 r_669 T . PASS END=1561112;SVTYPE=DUP;SVLEN=64185 TR:VR 53:13 33:0 chr7 65975785 r_721_0 A [chr7:77132519[T . PASS SVTYPE=BND;MATEID=r_721_1 TR:VR 51:9 29:0 chr7 77132519 r_721_1 T [chr7:65975785[T . PASS SVTYPE=BND;MATEID=r_721_0 TR:VR 51:9 29:0 chr8 84044579 d_1152 A . Too_small_size END=84044621;SVTYPE=DEL;SVLEN=-42 TR:VR 45:10 20:0 chr9 24715037 d_1210 C . PASS END=24715086;SVTYPE=DEL;SVLEN=-49 TR:VR 32:8 18:0 chrX 108816221 r_833 T . PASS END=108821189;SVTYPE=DUP;SVLEN=4968 TR:VR 33:7 13:0 chrX 54058432 i_784 C . PASS END=54058432;SVTYPE=INS;SVINSLEN=92;SVINSSEQ=AGATCGCCTGAGGTCAGGAGTTCGAGACCAGCCTGACTAATACGATGAAACTCTATGTCTATTAGAAATAAAAAATTAGGCCAGGCATGGTG TR:VR 20:10 17:0 chr1 97012707 r_30 T . PASS END=97682934;SVTYPE=DEL;SVLEN=-670227 TR:VR 36:7 43:0 chr10 29112711 r_95 G . PASS END=29130367;SVTYPE=DUP;SVLEN=17656 TR:VR 95:12 26:0 chr12 31119805 d_228 G . PASS END=31119824;SVTYPE=INS;SVINSLEN=179;SVINSSEQ=ACACACCCCAGGGAGGCCAGGAATGAGAGCCAGTTCCCTCTCCCCCCACTGGCTATTAAGACACCCATCGCAGAGGGTGAGGCACCACCCTACGAGACGGAGACTGAGAGCCAGCCCCTCTTTCAACCTGGCTCTGGAGGACCCCCATCGCAGGGCTGGGAGGCATCCCCAGCGAGGCG TR:VR 25:6 15:0 chr17 81952321 i_271 G . PASS END=81952321;SVTYPE=INS;SVINSLEN=144;SVINSSEQ=GGGAGGGAGGGAGGAGGAGGGGAGGGAGGGAGGAGGAGGGGGAGGGAGGGAGGGGAGGAGGAGGGGAGGGAGGGGATGAGGGGAGGGAGGGAGGACGAGGGAGAGGGAGGGAGGAGGAGGGGAGGGAGGGGAGGAGGAGGGGAA TR:VR 36:5 10:0 chr18 37323436 r_372 A . PASS END=37325331;SVTYPE=DUP;SVLEN=1895 TR:VR 44:9 22:0 chr2 122587640 i_360 G . PASS END=122587640;SVTYPE=INS;SVINSLEN=685;SVINSSEQ=GACTTGCTAACAACTCTTTATTTAGTATAGAGAATATCTACAGGTAAGAAGGTGTTGGCAATGGGGATGAGGTGGAGAAGGCAGCATCGCAGTTGGCATGGACTTAAATGTAAGCAGGGTTTTTACATGAAGATTGAAGGGTGATAAGTGAAACAAAAAGAAATACATAGAAAAGAAAGAAAAAGGAATTGATTCCAAATAATATATTATAACATACGTGTTACGGGACTGAACTGAAACTGGTATACTTTGTTATGGCAACCTTGCTAACTCACACAGATTCTGGTATCAAAAGGGAGGATTCTGCTGTAACAAAATAACCTAAAAATCTAGAAGTGGCTTTGGAACTGGGTAGAGAAATCCATCTCATTTGGATGTATGTTACACAAAGCCTAAATTGATTGGAAGAGAGTATTGTTAAAAATATAGATGCTGAATGTGATTCCTGTGAGTCCTCAGAAAATTAGAGAGCTGTAGAGAAATCTTCTAGCATCTCATAAAAATACATGTACAGTCATTAACAAAATGTTGCTAGAAATATGTATGCTGAAGGTGCTTCTGGTGAGGTCTCAGAGCTTAGGAATATGTAATTGAAAACTGGAGGAAAGGAGATTCTTCTTACAAGGTGGCAAGGACTTGGCTGAATTGTATTCTAGTGTTTTGTGGAAAATAGATCTTGTAGGTG TR:VR 28:4 25:0 chr2 73537279 r_423 T . PASS END=73540996;SVTYPE=DUP;SVLEN=3717 TR:VR 39:6 19:0 chr3 95812638 d_868 G . PASS END=95812700;SVTYPE=DEL;SVLEN=-62 TR:VR 29:8 20:0 chr4 95434684 d_958 T . PASS END=95434872;SVTYPE=DEL;SVLEN=-188 TR:VR 69:8 17:0 chr6 151436214 d_1075 A . Too_small_size END=151436254;SVTYPE=DEL;SVLEN=-40 TR:VR 18:10 17:0 chr6 39571599 d_1057 G . PASS END=39571751;SVTYPE=DEL;SVLEN=-152 TR:VR 27:4 20:0 chr7 147540981 d_1121 A . PASS END=147543097;SVTYPE=DEL;SVLEN=-2116 TR:VR 22:10 15:0 chr7 67292902 r_722_0 C C]chrX:128950186] . PASS SVTYPE=BND;MATEID=r_722_1 TR:VR 95:9 32:0 chrX 128950186 r_722_1 T T]chr7:67292902] . PASS SVTYPE=BND;MATEID=r_722_0 TR:VR 95:9 32:0 chr8 85442893 r_755 A . PASS END=85465312;SVTYPE=DUP;SVLEN=22419 TR:VR 78:7 30:0 chr9 28120869 d_1211 G . Too_small_size END=28120904;SVTYPE=DEL;SVLEN=-35 TR:VR 35:11 13:0 chrX 109536962 r_834 G . PASS END=109552501;SVTYPE=DUP;SVLEN=15539;SVINSLEN=39;SVINSSEQ=TATAATATAATATAATATAATATAATATAATAGCTCTAA TR:VR 41:3 24:0 chrX 54403240 d_1362 A . PASS END=54403409;SVTYPE=DEL;SVLEN=-169;SVINSLEN=113;SVINSSEQ=TCCAACCCCCGTCCCCCACCGGCCTCCCACAGTGCTGGGATTACAGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTG TR:VR 20:7 22:0