##fileformat=VCFv4.3 ##fileDate=20230117 ##source=nanomonsv-0.5.0 ##reference=/projects/jfan_prj/jfan_prj/Nanopore_Testing/2021_nanopore_sv_testing/scratch/depth_testing/POG/COLO829/hg38_no_alt.fa ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##FILTER= ##FILTER= ##FILTER= ##FILTER= ##FILTER= ##FILTER= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##ALT= ##ALT= ##ALT= ##FORMAT= ##FORMAT= #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT TUMOR CONTROL chr1 2663701 d_10 A . Too_low_VAF END=2663751;SVTYPE=DEL;SVLEN=-50;SVINSLEN=9;SVINSSEQ=TCCTGGAGC TR:VR 225:5 100:1 chr14_GL000225v1_random 33687 d_323 A . Too_low_VAF END=33973;SVTYPE=DEL;SVLEN=-286;SVINSLEN=15;SVINSSEQ=CAAAATCCCATCACG TR:VR 555:12 422:0 chr18 79250818 d_600 G . Too_small_size END=79250854;SVTYPE=DEL;SVLEN=-36 TR:VR 48:14 15:0 chr2 90382211 i_442 A . Too_low_VAF END=90382212;SVTYPE=INS;SVINSLEN=192;SVINSSEQ=TTGAATGGACTCGAATGGAATAATCGAATGGGCTTGAGTGGAATCATCATCAAATGGAATCGAATGGAATCATCAAATGGACTTGAATGGAAACAACATCGAATGGAATCGAATTTAGTCATTGAATTGCATTGAGTGGAATCATCACTGAATGGAATCTAAGGAAATCATCGAACGGACTCGAGTGGAATC TR:VR 499:3 379:1 chr8 69663950 r_243_0 A ACCTGCCAAAC]chr8:76772876] . Too_low_VAF SVTYPE=BND;MATEID=r_243_1;SVINSLEN=10;SVINSSEQ=CCTGCCAAAC TR:VR 140:6 47:0 chr8 76772876 r_243_1 G GGTTTGGCAGG]chr8:69663950] . Too_low_VAF SVTYPE=BND;MATEID=r_243_0;SVINSLEN=10;SVINSSEQ=GTTTGGCAGG TR:VR 140:6 47:0 chr11 71563394 r_37_0 A [chr7:136667421[TGTTGCT . PASS SVTYPE=BND;MATEID=r_37_1;SVINSLEN=6;SVINSSEQ=TGTTGC TR:VR 69:6 54:0 chr7 136667421 r_37_1 T [chr11:71563394[GCAACAT . PASS SVTYPE=BND;MATEID=r_37_0;SVINSLEN=6;SVINSSEQ=GCAACA TR:VR 69:6 54:0 chr21 7948469 i_632 T . Too_low_VAF END=7948469;SVTYPE=INS;SVINSLEN=148;SVINSSEQ=CACATGGATCTCACTTTGATCCACTCAGACTCAAGTCCAGTGCACAATCTTAGAACACTGCATTCCACTCCATTCCATTCTGTTCCATTCCATTCCATTCCATTCCATTCCACTCCGTTCCAATCCATTCCATTCCACCTTGCTACTC TR:VR 428:4 329:1 chr3 37291550 r_151_0 G [chr3:39918832[T . PASS SVTYPE=BND;MATEID=r_151_1 TR:VR 70:14 43:0 chr3 39918832 r_151_1 T [chr3:37291550[T . PASS SVTYPE=BND;MATEID=r_151_0 TR:VR 70:14 43:0 chr7 7956038 r_215_0 G ]chr8:39367769]T . PASS SVTYPE=BND;MATEID=r_215_1 TR:VR 153:36 52:0 chr8 39367769 r_215_1 T T[chr7:7956038[ . PASS SVTYPE=BND;MATEID=r_215_0 TR:VR 153:36 52:0 chr8 69742754 r_244_0 C C]chr8:71250682] . Too_low_VAF SVTYPE=BND;MATEID=r_244_1 TR:VR 173:7 35:0 chr8 71250682 r_244_1 T T]chr8:69742754] . Too_low_VAF SVTYPE=BND;MATEID=r_244_0 TR:VR 173:7 35:0 chr11 72201189 i_133 C . PASS END=72201189;SVTYPE=INS;SVINSLEN=775;SVINSSEQ=GTGTATACACGTATACTCGCAATATTACACGTATACTGTACTGACGTATACCGCATGTATACTGCGTATATCGTATATGTACGTGTACTGCGTATACGTGTATACGTATTATGCGTATACGTATGTATACGTCTCCACCGCGTCTATCGTATACGTATATACGTATACTGCGTATACGTGTATGTACACTTTTGATATACTTATCGTGATATGTACCACGTCTCTGCGATATCATGTATACCATTGTCTGTCTATCTGCGTGTATCGTATACCTTATGATACCGCTCTCTATCACACTGTCTCTGTACTCTCTGTCTGTCTGTCTCGATATACGCATGTATCACGATGTCTTGCTGTATCACTCTGTCTCTGCGATATCTGTGTCTCTCTCTGCATTATACTTTTATCTCTGTAATATATCTGCACGTATACCTTTGTCTTCATCGTCTATGAATATATACTGCGTATACACGTGTATACTGCGTATACCGCGTATACGATATGTATACGTATACACGTATACGTATACACTATCGATATACGTATATACACGTATGCGATATACGTGCTGTACGTCTGCGCGTATACGCGTATACGTGTGCGTGTACCGCGTATACACGTATACGCATTATCACGTGTGCTGACACCCATACGTATACTGCGATACACGTATACGTATGTACACGTGTACGTATATCGTATACGCATTATCACGCGGTACACGTGTACGCGTAAATGTTCTCTGCGTATCACGTATGGCGTACGTATACGTATA TR:VR 45:3 27:0 chr17 21969205 i_324 A . Too_low_VAF END=21969205;SVTYPE=INS;SVINSLEN=167;SVINSSEQ=GTCAACTCGAATTGGAGTGGAGTGGAATGGAATGGAATAGAATGGAATCAACCCGAATGGAAAGTAATGTAATGTAATGTAATGTAATGTAATGTAATGTAATGTAATGTAATGTAATGTAATGAAATGGGTTGGAATCAACCCCTAAGGGAACGGAATGGAATGGA TR:VR 268:7 135:1 chr22 49274349 r_147_0 A ]chr4:190116189]T . PASS SVTYPE=BND;MATEID=r_147_1 TR:VR 136:9 152:0 chr4 190116189 r_147_1 T T[chr22:49274349[ . PASS SVTYPE=BND;MATEID=r_147_0 TR:VR 136:9 152:0 chr8 69917385 d_1165 A . Too_small_size END=69917421;SVTYPE=DEL;SVLEN=-36 TR:VR 82:38 23:0 chr1 114172802 r_5 T . PASS END=114182975;SVTYPE=DEL;SVLEN=-10173 TR:VR 59:25 20:0 chr20 31070339 d_819 A . Too_low_VAF END=31070664;SVTYPE=DEL;SVLEN=-325 TR:VR 647:5 393:1 chr7 10058184 r_219 T . PASS END=54212636;SVTYPE=DEL;SVLEN=-44154452 TR:VR 82:22 50:0 chr7 8787702 r_216_0 C C[chr8:79186812[ . PASS SVTYPE=BND;MATEID=r_216_1 TR:VR 189:19 49:0 chr8 79186812 r_216_1 A ]chr7:8787702]A . PASS SVTYPE=BND;MATEID=r_216_0 TR:VR 189:19 49:0 chrUn_GL000216v2 161640 d_1208 C . PASS END=162453;SVTYPE=DEL;SVLEN=-813;SVINSLEN=47;SVINSSEQ=CCAGGTGACGAACTCTTGTCTTGGATCTGCCTATGGGGGCATTGTGA TR:VR 76:5 56:1 chr14_GL000009v2_random 156856 r_61_0 T T[chr22:11032436[ . Too_low_VAF SVTYPE=BND;MATEID=r_61_1 TR:VR 200:7 123:0 chr22 11032436 r_61_1 A ]chr14_GL000009v2_random:156856]A . Too_low_VAF SVTYPE=BND;MATEID=r_61_0 TR:VR 200:7 123:0 chr8 18351875 d_1151 T . Too_small_size END=18351915;SVTYPE=DEL;SVLEN=-40 TR:VR 35:8 19:0 chr8 70792634 r_246_0 T T]chr8:71261886] . Too_low_VAF SVTYPE=BND;MATEID=r_246_1 TR:VR 155:7 44:0 chr8 71261886 r_246_1 A A]chr8:70792634] . Too_low_VAF SVTYPE=BND;MATEID=r_246_0 TR:VR 155:7 44:0 chr1 11522494 i_12 A . PASS END=11522523;SVTYPE=INS;SVINSLEN=284;SVINSSEQ=GCCGGGCTCCCAGCCAGGATCCCAGCCAGGACCCAGCCAGGACCCAGCCAGAGCCCAGCCAGGACCAGCCCAGCGGACCCAGCCAGGACCCAGCAGAGCCCAGCCAGGGCCCAGCCAGAGCCCAGCCAGGACCCAGCCGAGGGCAGCCAGGACCCAGCCAGGACCCAGCCAGGGCCCAGCCAGGACCCAGCCAGGACCCAGCCAGAGCCCAGCCAGGACCCAGCCAGGGCCCAGCCAGACTGTGGACCCAGCCAGGACCCAGCCAGAGCCCAGCCAGGGCCCAG TR:VR 40:5 19:0 chr21 10346247 r_139_0 T ]chr5:69083837]C . PASS SVTYPE=BND;MATEID=r_139_1 TR:VR 224:22 110:0 chr5 69083837 r_139_1 C C[chr21:10346247[ . PASS SVTYPE=BND;MATEID=r_139_0 TR:VR 224:22 110:0 chr4 167021255 r_184 C . PASS END=167800400;SVTYPE=DEL;SVLEN=-779145 TR:VR 50:5 42:0 chr7 4512650 r_211_0 G ]chr8:81508227]C . PASS SVTYPE=BND;MATEID=r_211_1 TR:VR 188:12 34:0 chr8 81508227 r_211_1 C C[chr7:4512650[ . PASS SVTYPE=BND;MATEID=r_211_0 TR:VR 188:12 34:0 chr8 71250412 r_247_0 T [chr8:71265694[C . PASS SVTYPE=BND;MATEID=r_247_1 TR:VR 125:8 29:0 chr8 71265694 r_247_1 C [chr8:71250412[C . PASS SVTYPE=BND;MATEID=r_247_0 TR:VR 125:8 29:0 chr13 114279580 r_58_0 C C[chr17:31929028[ . PASS SVTYPE=BND;MATEID=r_58_1 TR:VR 40:9 50:0 chr17 31929028 r_58_1 A ]chr13:114279580]A . PASS SVTYPE=BND;MATEID=r_58_0 TR:VR 40:9 50:0 chr2 99139220 r_119_0 A [chr2:99140833[G . PASS SVTYPE=BND;MATEID=r_119_1 TR:VR 64:18 38:0 chr2 99140833 r_119_1 G [chr2:99139220[G . PASS SVTYPE=BND;MATEID=r_119_0 TR:VR 64:18 38:0 chr21 10354846 r_140_0 A A[chr7:130809633[ . Too_low_VAF SVTYPE=BND;MATEID=r_140_1 TR:VR 254:6 127:0 chr7 130809633 r_140_1 T ]chr21:10354846]T . Too_low_VAF SVTYPE=BND;MATEID=r_140_0 TR:VR 254:6 127:0 chr6 13471566 d_1049 T . PASS END=13471615;SVTYPE=DEL;SVLEN=-49;SVINSLEN=1;SVINSSEQ=G TR:VR 35:16 19:0 chr7 45574559 d_1097 C . PASS END=45574608;SVTYPE=DEL;SVLEN=-49 TR:VR 30:5 18:0 chr8 71251165 r_248_0 T [chr8:71252719[G . PASS SVTYPE=BND;MATEID=r_248_1 TR:VR 88:7 22:0 chr8 71252719 r_248_1 G [chr8:71251165[G . PASS SVTYPE=BND;MATEID=r_248_0 TR:VR 88:7 22:0 chr3 39930225 r_152 T . PASS END=55041824;SVTYPE=DEL;SVLEN=-15111599 TR:VR 65:15 46:0 chr8 22552990 d_1152 A . PASS END=22553082;SVTYPE=DEL;SVLEN=-92 TR:VR 33:3 25:0 chr8 71252909 r_249 A . PASS END=71259960;SVTYPE=DEL;SVLEN=-7051 TR:VR 103:7 25:0 chr1 118654463 r_6_0 T T]chr3:41559778] . Too_low_VAF SVTYPE=BND;MATEID=r_6_1 TR:VR 64:3 45:1 chr3 41559778 r_6_1 T T]chr1:118654463] . Too_low_VAF SVTYPE=BND;MATEID=r_6_0 TR:VR 64:3 45:1 chr10 46363117 r_19 C . PASS END=46375822;SVTYPE=DUP;SVLEN=12705 TR:VR 43:3 32:0 chr11 98346950 r_38_0 A A]chr11:98348650] . PASS SVTYPE=BND;MATEID=r_38_1 TR:VR 45:4 27:0 chr11 98348650 r_38_1 T T]chr11:98346950] . PASS SVTYPE=BND;MATEID=r_38_0 TR:VR 45:4 27:0 chr13 18184408 r_47_0 T ]chr6:82290711]A . PASS SVTYPE=BND;MATEID=r_47_1 TR:VR 79:13 41:0 chr6 82290711 r_47_1 A A[chr13:18184408[ . PASS SVTYPE=BND;MATEID=r_47_0 TR:VR 79:13 41:0 chr18 80173394 d_602 G . PASS END=80173721;SVTYPE=DEL;SVLEN=-327 TR:VR 64:18 26:0 chr2 26333431 r_114_0 A ]chr4:89723827]AGGAGGGTGGGAAGCAC . PASS SVTYPE=BND;MATEID=r_114_1;SVINSLEN=16;SVINSSEQ=AGGAGGGTGGGAAGCA TR:VR 56:5 40:0 chr4 89723827 r_114_1 C CTGCTTCCCACCCTCCT[chr2:26333431[ . PASS SVTYPE=BND;MATEID=r_114_0;SVINSLEN=16;SVINSSEQ=TGCTTCCCACCCTCCT TR:VR 56:5 40:0 chr20 35628504 i_574 C . PASS END=35628504;SVTYPE=INS;SVINSLEN=95;SVINSSEQ=TGAATATGATGCACTGAGAATATACAGCATCACTTTGGTGGTATTCCTGCCAAAAATGTACAACCTGAATCTAATCCTGAGGATTTATCAGGGTT TR:VR 48:8 21:0 chr6 157870486 i_877 A . PASS END=157870486;SVTYPE=INS;SVINSLEN=213;SVINSSEQ=GTCTCACCTGCTCTCACACATACATGCACTCACCTGTGCAAGCACGCACACACCCTCAGACACTCTCACCTGCTCTCACACATATATGCACTCACCCGTGCAAGCACACACACCCCTCCAGACACTCTCACCTGCCCTCACACATACCCACACTCTCCTGCTCTCACACAGATGCAGCACTCACCTGTGCAAGCACATACACCCTGCAGATGG TR:VR 16:4 18:0 chr1 11931820 r_0_0 C [chr7:131463700[G . PASS SVTYPE=BND;MATEID=r_0_1 TR:VR 93:8 44:0 chr7 131463700 r_0_1 G [chr1:11931820[G . PASS SVTYPE=BND;MATEID=r_0_0 TR:VR 93:8 44:0 chr13 18226075 r_48_0 T [chr6:82290494[G . PASS SVTYPE=BND;MATEID=r_48_1 TR:VR 83:13 40:0 chr6 82290494 r_48_1 G [chr13:18226075[G . PASS SVTYPE=BND;MATEID=r_48_0 TR:VR 83:13 40:0 chr19 10168508 r_110_0 G G[chr5:47025783[ . PASS SVTYPE=BND;MATEID=r_110_1 TR:VR 46:4 38:0 chr5 47025783 r_110_1 C ]chr19:10168508]C . PASS SVTYPE=BND;MATEID=r_110_0 TR:VR 46:4 38:0 chr2 27195048 r_115 A . PASS END=27239085;SVTYPE=DUP;SVLEN=44037;SVINSLEN=27;SVINSSEQ=TCCCGGAGAAGACTCATTAGGGGAATT TR:VR 41:9 44:0 chr4 181029712 d_1008 G . PASS END=181029765;SVTYPE=DEL;SVLEN=-53 TR:VR 26:9 27:0 chr8 259248 r_231_0 A [chr8:3785429[G . PASS SVTYPE=BND;MATEID=r_231_1 TR:VR 61:7 41:0 chr8 3785429 r_231_1 G [chr8:259248[G . PASS SVTYPE=BND;MATEID=r_231_0 TR:VR 61:7 41:0 chr1 11975982 r_1_0 G G[chr7:131507972[ . PASS SVTYPE=BND;MATEID=r_1_1 TR:VR 68:9 37:0 chr7 131507972 r_1_1 T ]chr1:11975982]T . PASS SVTYPE=BND;MATEID=r_1_0 TR:VR 68:9 37:0 chr10 49273111 r_20_0 A A]chr19:31068029] . PASS SVTYPE=BND;MATEID=r_20_1 TR:VR 52:11 44:0 chr19 31068029 r_20_1 G G]chr10:49273111] . PASS SVTYPE=BND;MATEID=r_20_0 TR:VR 52:11 44:0 chr13 18304608 r_49_0 C C]chr21:5260554] . Too_low_VAF SVTYPE=BND;MATEID=r_49_1 TR:VR 184:5 64:0 chr21 5260554 r_49_1 T T]chr13:18304608] . Too_low_VAF SVTYPE=BND;MATEID=r_49_0 TR:VR 184:5 64:0 chr14_GL000225v1_random 39202 d_331 A . Too_low_VAF END=39962;SVTYPE=DEL;SVLEN=-760;SVINSLEN=144;SVINSSEQ=TATGTCACAATGCCACTGTAGGCAGAGCCTAGAAAAGAGTTACATGACCTGGGTGATCAGTGCAGAGATATGTCGCAATATCCCTGTAGGCAGAGCCTTGACAAGTGGTACATCACCTGGGTGATCATTGCAGGGATATGTCAC TR:VR 598:4 451:1 chr2 90392934 d_714 A . Too_low_VAF END=90393287;SVTYPE=DEL;SVLEN=-353;SVINSLEN=72;SVINSSEQ=ATGGAATCATCATCGAATAAAATCAAATGGAATCATCGAATGTACTCGAATGGAATCATCAAATGGATTTGA TR:VR 619:3 428:1 chr20 13669982 i_553 C . PASS END=13669982;SVTYPE=INS;SVINSLEN=137;SVINSSEQ=TTCTTCATGCTTTTCTGTTTGGGAAGTTTCTATTGTCATATCCTTAAGCTCAGAGATTCTTTCCTCAACCAAGTCCAAGTGTACTAGTAAGCCCATCAAAAAGCATTCTTCATTTATGTTACAGGGTTTTTGATATC TR:VR 20:5 23:0 chr20 41090416 r_132 T . PASS END=41139887;SVTYPE=DUP;SVLEN=49471 TR:VR 70:8 43:0 chr3 51857063 r_153_0 A ATCCGAACATCAGAAGGAACAAACTCCAGACACACCATCTTTAAGAACTGTAACATTCACTGCAAGGGTCCGTGGCTTCACTCTTGAAGTCAGTGAGACCAAGAACCCACCAATTCTGGACATA[chr4:103456373[ . PASS SVTYPE=BND;MATEID=r_153_1;SVINSLEN=123;SVINSSEQ=TCCGAACATCAGAAGGAACAAACTCCAGACACACCATCTTTAAGAACTGTAACATTCACTGCAAGGGTCCGTGGCTTCACTCTTGAAGTCAGTGAGACCAAGAACCCACCAATTCTGGACATA TR:VR 85:11 56:1 chr4 103456373 r_153_1 A ]chr3:51857063]TATGTCCAGAATTGGTGGGTTCTTGGTCTCACTGACTTCAAGAGTGAAGCCACGGACCCTTGCAGTGAATGTTACAGTTCTTAAAGATGGTGTGTCTGGAGTTTGTTCCTTCTGATGTTCGGAA . PASS SVTYPE=BND;MATEID=r_153_0;SVINSLEN=123;SVINSSEQ=TATGTCCAGAATTGGTGGGTTCTTGGTCTCACTGACTTCAAGAGTGAAGCCACGGACCCTTGCAGTGAATGTTACAGTTCTTAAAGATGGTGTGTCTGGAGTTTGTTCCTTCTGATGTTCGGA TR:VR 85:11 56:1 chr4 181401583 r_185 C . PASS END=181630881;SVTYPE=DEL;SVLEN=-229298 TR:VR 44:4 45:0 chr8 82025181 r_250 A . PASS END=85409753;SVTYPE=DUP;SVLEN=3384572;SVINSLEN=2;SVINSSEQ=TT TR:VR 143:9 33:0 chr14_GL000225v1_random 104704 d_438 G . Too_low_VAF END=104804;SVTYPE=DEL;SVLEN=-100 TR:VR 202:3 212:0 chr14_GL000225v1_random 39242 d_332 T . Too_low_VAF END=39943;SVTYPE=DEL;SVLEN=-701;SVINSLEN=160;SVINSSEQ=TACATCTTGACCCGGTGATCAGTGCAGAGATATGTGAGAATTCCCGTGTAGGCAGAGCCTAGACAAGTGTTACATCACCCTAGGTTATCAGTGCAGGTATAAGTCATAAAGCCTCCTGTAGGCAGAGCTATAGACAAGAGTTGTTATATCCCAGGGTGAT TR:VR 587:4 451:0 chr14_GL000225v1_random 75879 d_390 G . Too_low_VAF END=76707;SVTYPE=DEL;SVLEN=-828;SVINSLEN=11;SVINSSEQ=TTGTAACTCTG TR:VR 710:5 724:1 chr17 28269504 r_90 A . PASS END=48772530;SVTYPE=DEL;SVLEN=-20503026 TR:VR 42:10 50:0 chr3 55256746 r_154_0 A A]chr3:61772063] . PASS SVTYPE=BND;MATEID=r_154_1 TR:VR 83:7 37:0 chr3 61772063 r_154_1 A A]chr3:55256746] . PASS SVTYPE=BND;MATEID=r_154_0 TR:VR 83:7 37:0 chr6 166749769 i_880 C . PASS END=166749769;SVTYPE=INS;SVINSLEN=166;SVINSSEQ=CCATCCCCTTGGGCCCTCTTCCCCAGGCCCCCACCTCCTCAGGCCCCCATCTCCTCAGGCTCCCATCTCCTCTGGGCCCCCATTTCCTCAGGCCCCCACCTCCTCAGGCCCCCCATCCCCTTAGGCTCCCTCTCCCTCAGGCCCCCCATCTCCTCAGGCCCCATGC TR:VR 32:5 16:0 chr7 49652987 d_1098 A . PASS END=49653090;SVTYPE=DEL;SVLEN=-103 TR:VR 23:3 19:0 chr8 82170114 r_251 A . PASS END=84184543;SVTYPE=DEL;SVLEN=-2014429 TR:VR 129:16 36:0 chr1 154710509 r_9 T . PASS END=154743537;SVTYPE=DUP;SVLEN=33028 TR:VR 73:6 39:0 chr10 133078262 d_234 C . PASS END=133078291;SVTYPE=INS;SVINSLEN=51;SVINSSEQ=CTTGGCGTGTGTGTGAGAAACTGCCCCGCGGCGTGTGAGAAACTGCCCCTT TR:VR 31:4 16:0 chr14_GL000225v1_random 104909 r_68_0 C [chr14_GL000225v1_random:105923[AAG . Too_low_VAF SVTYPE=BND;MATEID=r_68_1;SVINSLEN=2;SVINSSEQ=AA TR:VR 336:4 337:1 chr14_GL000225v1_random 105923 r_68_1 G [chr14_GL000225v1_random:104909[TTG . Too_low_VAF SVTYPE=BND;MATEID=r_68_0;SVINSLEN=2;SVINSSEQ=TT TR:VR 336:4 337:1 chr17 28588460 r_91_0 G [chr17:32536391[T . PASS SVTYPE=BND;MATEID=r_91_1 TR:VR 67:18 43:0 chr17 32536391 r_91_1 T [chr17:28588460[T . PASS SVTYPE=BND;MATEID=r_91_0 TR:VR 67:18 43:0 chr20 4831309 r_127_0 G G[chr8:38754984[ . Too_low_VAF SVTYPE=BND;MATEID=r_127_1 TR:VR 91:4 54:0 chr8 38754984 r_127_1 A ]chr20:4831309]A . Too_low_VAF SVTYPE=BND;MATEID=r_127_0 TR:VR 91:4 54:0 chr4 566859 i_719 C . PASS END=566870;SVTYPE=INS;SVINSLEN=381;SVINSSEQ=CCCCTGTATCCCACCCCTGCCATCCGCACACCCTGCATGCCACCCTATATACCCACCCCTGCATCCCCCCCTGCATCCCACCCCCTGCCCCTACATGCCACCCCTCCATCCACCCTGTATCCCACCCTACATCCCACCCCTTCATGTCCACCCATCCGCCCTACCATCCACCCCTGCATCCTGCCCTCCCATCCCACCCCTGTATCCCACCTGCGTCCCACCATCCCACCGCCTCCATCCCACCCCCGTCCCACCCCTACACGTCCACCCTCACATCCCACCCCCCCACATCCACCCCTTCATGCCACCCCCATCCCACCCTTCATCCATGCCACCACCTGCATCCCACCTGCATCCCACCTGCATCCCTCCCTGCATGCA TR:VR 57:8 14:0 chr7 5471900 r_213_0 C ]chr8:39355381]G . Too_low_VAF SVTYPE=BND;MATEID=r_213_1 TR:VR 170:3 40:0 chr8 39355381 r_213_1 G G[chr7:5471900[ . Too_low_VAF SVTYPE=BND;MATEID=r_213_0 TR:VR 170:3 40:0 chr8 85410081 r_252 A . PASS END=85459311;SVTYPE=DEL;SVLEN=-49230 TR:VR 92:5 37:0 chrX 1735760 i_1109 C . PASS END=1735760;SVTYPE=INS;SVINSLEN=116;SVINSSEQ=CTCCTCCTCCTCCTCCTTCTCCTTCTCCTCCTCCTCTTTCTCCCTCCTCCTCTTCTCCCTCCTCCGCCTTCTCCTCCTCCGCGCTCTCCTCCTCCGCTTCTCCTCTCCTCCTCTTC TR:VR 32:3 20:0 chr17 31158956 d_551 A . PASS END=31159005;SVTYPE=DEL;SVLEN=-49 TR:VR 16:10 25:0 chr20 22228585 r_128_0 T ]chr8:952742]T . PASS SVTYPE=BND;MATEID=r_128_1 TR:VR 72:12 43:0 chr8 952742 r_128_1 T T[chr20:22228585[ . PASS SVTYPE=BND;MATEID=r_128_0 TR:VR 72:12 43:0 chr3 55944759 r_155 T . PASS END=55947323;SVTYPE=DUP;SVLEN=2564 TR:VR 49:4 19:0 chr8 38088607 r_233_0 A [chr8:38092755[G . PASS SVTYPE=BND;MATEID=r_233_1 TR:VR 60:9 23:0 chr8 38092755 r_233_1 G [chr8:38088607[G . PASS SVTYPE=BND;MATEID=r_233_0 TR:VR 60:9 23:0 chr10 58189668 d_223 C . Too_small_size END=58189704;SVTYPE=DEL;SVLEN=-36 TR:VR 19:5 23:0 chr7 1031396 i_897 G . PASS END=1031396;SVTYPE=INS;SVINSLEN=226;SVINSSEQ=CAGAGACCTGCAGGGAGGGCAGAGTGGTCCGGGGGGGCAGGGCCCTGCAGGGAGGGCAGAGTGGTCCGGGGGGGCAGAGACCTGCAGGAGGGGAGGGCAGAGTGGGTCCGGGGCGGCAGAGACCTGCAGGGAGGGCAGAGTGGTCCGGGGCGGCAGAGACCTGCAGGGAGGGCAGAGTGGTCCGGGGCGGCAGAGACCTGCAGGGAGGGCAGAGTGGTCCGGGGCG TR:VR 70:5 24:0 chr8 38238630 r_234_0 T [chr8:38238771[T . PASS SVTYPE=BND;MATEID=r_234_1 TR:VR 60:16 23:0 chr8 38238771 r_234_1 T [chr8:38238630[T . PASS SVTYPE=BND;MATEID=r_234_0 TR:VR 60:16 23:0 chr8 85992090 r_253_0 G G]chr9:36849410] . PASS SVTYPE=BND;MATEID=r_253_1 TR:VR 67:6 58:0 chr9 36849410 r_253_1 T T]chr8:85992090] . PASS SVTYPE=BND;MATEID=r_253_0 TR:VR 67:6 58:0 chr10 6234007 d_193 C . Too_small_size END=6234046;SVTYPE=DEL;SVLEN=-39 TR:VR 24:7 26:0 chr15 20342665 d_473 A . Too_low_VAF END=20343015;SVTYPE=DEL;SVLEN=-350;SVINSLEN=46;SVINSSEQ=CCTTGCCAGCCATAGCCAAGCCAGCCATGCCAATAGCCAGGCCAAT TR:VR 117:3 91:0 chr17_KI270729v1_random 164325 d_580 C . PASS END=164360;SVTYPE=INS;SVINSLEN=136;SVINSSEQ=GATGATTCCGTTTGATTTCATTAGATGATGACTGCATTTGATTCCATCTGATGATGATTCCAACGGACTGCATTCGATGACTCCATTTGATTCCATTCATTGACGATTCCATTCAATTCCATTTGATGATGTTTCC TR:VR 72:4 33:0 chr21 9846195 r_137_0 C ]chr9:29148324]AAACCC . PASS SVTYPE=BND;MATEID=r_137_1;SVINSLEN=5;SVINSSEQ=AAACC TR:VR 165:14 83:0 chr9 29148324 r_137_1 C CGGTTT[chr21:9846195[ . PASS SVTYPE=BND;MATEID=r_137_0;SVINSLEN=5;SVINSSEQ=GGTTT TR:VR 165:14 83:0 chr7 92640757 r_227_0 T [chrUn_KI270749v1:61231[T . PASS SVTYPE=BND;MATEID=r_227_1 TR:VR 110:8 53:0 chrUn_KI270749v1 61231 r_227_1 T [chr7:92640757[T . PASS SVTYPE=BND;MATEID=r_227_0 TR:VR 110:8 53:0 chr2 112776524 i_511 A . Too_low_VAF END=112776524;SVTYPE=INS;SVINSLEN=281;SVINSSEQ=AAAACCCACAACCACGACCGCCCCCTCCTCTGAATGTCCTACCCAAAAACCCACAACCCCGACCGCCCCCTTCCTCTGAATGTCTCCCCTGCCAAACCCACAACAGCTTACCCGCCCCCTCTCTCTGAATGTCCCTGCCAAAACCCACACAACCACGACTCGCCCCCTCCTCTGAATGTCCTACCCAAAAACCCACAACCACGACCCGCCCCCTCCTCTGAATGTCACTGCCAAAAACCCACAACCACGACCCCGCCCCCTCCTCTGAATGTCCTCACCTA TR:VR 75:3 18:0 chr21 9903517 r_138_0 C ]chr9:36647415]A . PASS SVTYPE=BND;MATEID=r_138_1 TR:VR 168:9 84:0 chr9 36647415 r_138_1 A A[chr21:9903517[ . PASS SVTYPE=BND;MATEID=r_138_0 TR:VR 168:9 84:0 chr3 58992892 r_156_0 A [chr3:61772148[G . PASS SVTYPE=BND;MATEID=r_156_1 TR:VR 72:10 47:0 chr3 61772148 r_156_1 G [chr3:58992892[G . PASS SVTYPE=BND;MATEID=r_156_0 TR:VR 72:10 47:0 chr4 61135503 d_995 A . PASS END=61136235;SVTYPE=DEL;SVLEN=-732;SVINSLEN=59;SVINSSEQ=TTCCAGAAGGATCATCTAACATTGGATCTACTGTAAGTTGACAAAATCTACTGTAAGTT TR:VR 36:12 18:0 chr7 55917985 r_222_0 A [chr7:55920394[A . PASS SVTYPE=BND;MATEID=r_222_1 TR:VR 71:4 21:0 chr7 55920394 r_222_1 A [chr7:55917985[A . PASS SVTYPE=BND;MATEID=r_222_0 TR:VR 71:4 21:0 chr10 67541221 r_21 T . PASS END=67560694;SVTYPE=DEL;SVLEN=-19473 TR:VR 38:6 30:0 chr16 46398963 d_522 T . Too_low_VAF END=46400001;SVTYPE=DEL;SVLEN=-1038;SVINSLEN=252;SVINSSEQ=CATCAAATGGACTCTAATGGAATCATCATCAAATGAAATTGAATGGGATCATCATCAAATGTAATTGAATGGTATCATTATCAAAAGAAATCCAGTGGAATCACCAAATGGACTCGACTGTAATGATTAAATGGACTCGAATGGAATCATCATCAAATGGAATCGAATGGAATCATCGAATGGACTCGAATGGAATCATGTTGAATGGACTCGAATGGAGTCATTGAATGGACTCTAGTAGAATCATTTTCA TR:VR 928:3 893:0 chr17 32136935 r_92 T . PASS END=32258500;SVTYPE=DEL;SVLEN=-121565 TR:VR 43:9 43:0 chr8 42884653 i_977 C . PASS END=42884722;SVTYPE=INS;SVINSLEN=410;SVINSSEQ=GGGTGTGGTGGCTCAAGCCTGTCATCCCAGCACTTTGGGAGGCTGAGGTGGGCGGATCACGAGGTCAGGAGATCAAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATATAAAAAATTAGCCTGGCGCGATGGCGGGCGCCTATAGTCCCAGCTACTCGGGAGGCCGAGGCAGGAGAATGGCATGGTGTGAACCCGGGAGGCGGAGCTTGCAGCGAGCCGACATAGGGCGAAAGAGTGAGACGCCGTCTCAAAAAAAAAAAAAAAAAAAAATAGTCTTCGCCGGGCACGGTGGCTCACACCTGTAATCCCAACACTTTGGGAGGCTAGGGCAGGTGGATCCCCTGAGGTCAGGCGAAAGCGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAGG TR:VR 26:5 17:0 chr1 158267645 r_11_0 C ]chr11:15358714]T . PASS SVTYPE=BND;MATEID=r_11_1 TR:VR 78:4 49:1 chr11 15358714 r_11_1 T T[chr1:158267645[ . PASS SVTYPE=BND;MATEID=r_11_0 TR:VR 78:4 49:1 chr10 133322546 r_27_0 C [chr10:133348157[A . PASS SVTYPE=BND;MATEID=r_27_1 TR:VR 67:4 34:0 chr10 133348157 r_27_1 A [chr10:133322546[A . PASS SVTYPE=BND;MATEID=r_27_0 TR:VR 67:4 34:0 chr13 42495318 r_50_0 A [chr9:29148988[T . PASS SVTYPE=BND;MATEID=r_50_1 TR:VR 64:15 39:0 chr9 29148988 r_50_1 T [chr13:42495318[T . PASS SVTYPE=BND;MATEID=r_50_0 TR:VR 64:15 39:0 chr21 21789651 r_141_0 A ]chr6:49034068]G . PASS SVTYPE=BND;MATEID=r_141_1 TR:VR 57:4 32:0 chr6 49034068 r_141_1 G G[chr21:21789651[ . PASS SVTYPE=BND;MATEID=r_141_0 TR:VR 57:4 32:0 chr7 943813 d_1077 G . Too_small_size;Too_low_VAF END=943775;SVTYPE=INS;SVINSLEN=18;SVINSSEQ=GAGGAAGGAGGAGGAAGG TR:VR 74:3 17:0 chrUn_KI270442v1 96384 i_1081 A . Too_low_VAF END=96384;SVTYPE=INS;SVINSLEN=66;SVINSSEQ=CTGCAATAGATTGCAATAGAAATCTCAATGGAATGTAGAGAATGGAATTGAATGGAATGGAATGGA TR:VR 166:3 84:0 chr1 162606445 d_160 T . PASS END=162606554;SVTYPE=DEL;SVLEN=-109 TR:VR 44:10 13:0 chr10 133345365 r_28_0 C C]chr7:18789091] . PASS SVTYPE=BND;MATEID=r_28_1 TR:VR 91:8 47:0 chr7 18789091 r_28_1 C C]chr10:133345365] . PASS SVTYPE=BND;MATEID=r_28_0 TR:VR 91:8 47:0 chr13 42495500 r_51_0 A A[chr9:29147355[ . PASS SVTYPE=BND;MATEID=r_51_1 TR:VR 66:15 39:0 chr9 29147355 r_51_1 A ]chr13:42495500]A . PASS SVTYPE=BND;MATEID=r_51_0 TR:VR 66:15 39:0 chr7 56368435 d_1100 A . Too_low_VAF END=56368664;SVTYPE=DEL;SVLEN=-229 TR:VR 244:3 71:0 chr7 9694656 r_217_0 C C]chr8:53766024] . PASS SVTYPE=BND;MATEID=r_217_1 TR:VR 125:19 42:0 chr8 53766024 r_217_1 A A]chr7:9694656] . PASS SVTYPE=BND;MATEID=r_217_0 TR:VR 125:19 42:0 chrX 28218375 r_267_0 G [chrX:28241834[A . PASS SVTYPE=BND;MATEID=r_267_1 TR:VR 45:7 30:0 chrX 28241834 r_267_1 A [chrX:28218375[A . PASS SVTYPE=BND;MATEID=r_267_0 TR:VR 45:7 30:0 chr1 16544084 r_2_0 C [chr1:16731348[G . Too_low_VAF SVTYPE=BND;MATEID=r_2_1 TR:VR 225:5 147:1 chr1 16731348 r_2_1 G [chr1:16544084[G . Too_low_VAF SVTYPE=BND;MATEID=r_2_0 TR:VR 225:5 147:1 chr13 42496556 r_52_0 G G]chr9:29147612] . PASS SVTYPE=BND;MATEID=r_52_1 TR:VR 66:17 39:0 chr9 29147612 r_52_1 A A]chr13:42496556] . PASS SVTYPE=BND;MATEID=r_52_0 TR:VR 66:17 39:0 chr7 9847731 r_218 T . PASS END=55559515;SVTYPE=DEL;SVLEN=-45711784 TR:VR 109:9 40:0 chrX 28219245 r_268 A . PASS END=28238958;SVTYPE=DEL;SVLEN=-19713;SVINSLEN=4;SVINSSEQ=AAAC TR:VR 44:6 30:0 chr1 165675939 r_12_0 C ]chr16:85736362]CC . Too_low_VAF SVTYPE=BND;MATEID=r_12_1;SVINSLEN=1;SVINSSEQ=C TR:VR 66:3 42:0 chr16 85736362 r_12_1 C CG[chr1:165675939[ . Too_low_VAF SVTYPE=BND;MATEID=r_12_0;SVINSLEN=1;SVINSSEQ=G TR:VR 66:3 42:0 chr15 33045156 r_70_0 G G[chr4:32715653[ . Too_low_VAF SVTYPE=BND;MATEID=r_70_1 TR:VR 79:3 48:0 chr4 32715653 r_70_1 C ]chr15:33045156]C . Too_low_VAF SVTYPE=BND;MATEID=r_70_0 TR:VR 79:3 48:0 chr2 55906943 r_117 T . PASS END=55945399;SVTYPE=DEL;SVLEN=-38456 TR:VR 47:22 33:0 chr2 90393773 d_721 T . Too_low_VAF END=90393808;SVTYPE=INS;SVINSLEN=185;SVINSSEQ=CGAATGGAATCGAAAGGAATCAACGAATGGAATCAAATGGAATCATCATCGAATGGAATCAAATGGAATCATTGTCGAATGGAATCGAAATGAAATCATCGAATGGACTCGAATGGAATCATCATCGAATGGAATCGAATGGAATCATTGAATCAAATAGAATCGAATCATCATTGAATGGAATC TR:VR 609:5 412:1 chr22 10719946 d_869 T . Too_low_VAF END=10720397;SVTYPE=DEL;SVLEN=-451;SVINSLEN=16;SVINSSEQ=CCATTTCATTCGAGTG TR:VR 155:3 93:1 chr1 165719856 r_13_0 G GGTTTTATATATTTGAGGGGGGCAT[chr16:85736213[ . PASS SVTYPE=BND;MATEID=r_13_1;SVINSLEN=24;SVINSSEQ=GTTTTATATATTTGAGGGGGGCAT TR:VR 80:4 49:0 chr16 85736213 r_13_1 G ]chr1:165719856]ATGCCCCCCTCAAATATATAAAACG . PASS SVTYPE=BND;MATEID=r_13_0;SVINSLEN=24;SVINSSEQ=ATGCCCCCCTCAAATATATAAAAC TR:VR 80:4 49:0 chr10 133555773 r_29 A . PASS END=133587998;SVTYPE=DEL;SVLEN=-32225 TR:VR 57:13 18:0 chr2 90386260 d_683 A . Too_low_VAF END=90386269;SVTYPE=INS;SVINSLEN=64;SVINSSEQ=TGGAATCAAATGGAATCATCAAATGCAATGGAATGGAATAGAATCTTTGAATGGAATCGAATGG TR:VR 571:3 415:0 chr2 90393825 d_722 G . Too_low_VAF END=90393952;SVTYPE=INS;SVINSLEN=128;SVINSSEQ=AATGGAATCGAATGGTATAATCGAAAGGAATCAAATGGAATCATCTTCGAGTGGAACCTAAAGGAATCATCAAATGGACTCCAATGGAATTATCATCGTATGGAATCGAGTGGAATCATCGAATGTAC TR:VR 609:8 415:1 chr5 29367950 r_186 A . PASS END=131581261;SVTYPE=DUP;SVLEN=102213311 TR:VR 61:9 38:0 chr13 46808795 r_53_0 A A[chr22:39451283[ . PASS SVTYPE=BND;MATEID=r_53_1 TR:VR 57:7 52:0 chr22 39451283 r_53_1 A ]chr13:46808795]A . PASS SVTYPE=BND;MATEID=r_53_0 TR:VR 57:7 52:0 chr2 90386471 i_450 T . Too_low_VAF END=90386471;SVTYPE=INS;SVINSLEN=2098;SVINSSEQ=CAAATGGAATCGAATGCAATCATCAAATGGACTCGAATGGAATCATCGTCAAATGGAATTGAATGGAATCATCATCAAAGGGAATCGAATGGAATCCTCATCGAATGGAATCGAACGGAATCATCATCGAATGGAATCACCAAATTGAATCGAATGGAATGATGGGATCAAAGACAATCGAAAGGAAACATCGAATGGGATTGAACGGAGTCATCGAATGGAATCGATAGGAATCATCGAATGGATTCAAATGCAATCATCATCGAATGGAAACGAACGGAATCATCGAATGGACACGAATGGAATCATCATCAAATAGGATTGAATGGAATCATCAAATGGCATCGAATGGAATCACCATTGAATGGAATCGAATGGAATCATCGAATGGCATCGAATGGAATCATCATCGAATAAAATCAAATGGAATAATCGAATGTACTCGAATGGAATCATCAAATGGATTTGAGAGGAATCATCATCGAATGGAATTGAACAGAATCATCAAATGGACTCGAATGGAATCCTCATTGAATGGAATCGAATGGAATCATTGAATGGAGTCGAATGGAATCATCAGCAAATGGAATCGAATGGAATCATTGAATATCAACGAATGGAATCATCATCGAATGCAGTCGAATGGAATCATCAAACGAACTCGAATGCAATCATCATAGAATGGAATCGAATGGAATCTTTGAATGGACCTGAATGGAATCATCATCGATTGCAAACGAATGGAATCATCATCAAATGGAATCACATGGAATCATCAAATGGAAAAGAATTGAATAATCATAGAAAGGAATTGAACAGAATCATCGAATGTAACCGAATGGAATCATCATCGAATGGAATCGAATGGAATCATCATTGAATGCAATTGAATGGAATCATCATCGAATGGAATCGAATGGAATCGTCATCGAATGGAATCGAATGGAATCATCAACGAATGCAACCAAATGGAATCATCAAATGGACTCGAAAGGAATCATCGAATGGACTCGAATGGAGTTGTCATCGAATGGAATCAAATGGAATCATCGAACGGAATTGAATCGAATCATCATTGAATGAAATCAAATGGAATCATCGAATGGACTCGAATGGAAGCAATATCAAATGGAATCGAAAGGAATCATGGAATGCATTCAAAGGGAATAATCAAATGGACTCAAATGGAATCAACATCAAGTGGAATCGAAAGGAATCATCGAATGGACTCGAATGGAATCATCATCGAATGGAATCGAATGGAATCATCGAATGGACTTGAATGGAATCACTATCTAATGGAACCGAATGGAATCATCATGGAATGGAACCGGAAGGAGTCATCATCAAATGGAATCCAAAGGAAATCATTGAATGGACTCGAATGGAATCATCATCAACTGGAATTGAATGGAATCATCGAACGGACTCCAGTGGAATCATCGGAGAATGGAATCAAATGGAATTATCAAATGGACTCGAATGGAATAAACTTTGAATGCAATCGAAGGGAATCATCAAATGGAATTGAATGCAATCATCGAATGGAATCGAATGCCATCACCGAATGGAATCCAATGGAATCACCATTGAATGGACTCGAATGGAATTATCATTGAATGGAATCGAATGAAATCATCGAATGGACTCGAATGGAATCATCATCGATTGGAATCAAATGGAATCATCCAATGGAATCGAAAGGAATCATCATCAACTGTAATGAACTGGAATCACTGAATGGAATCGAATGGAATCGTCATCAAAAATAATCGAATGGAATAATCAAATGGAATCAAATGCAATCAACATCAAATGGAATCGAATGGAATCCTAGAATGACATCGAATGGAATCCTCATCGAATGGAATCAAAGGGAATCAATATCGAATGGAATCGAAAGCAATCACTGAATGGACTTGAATACAATCATCAAATGGATTTGAAGGGAATCCTCATTGAATGGAATAGAACAAAAACATTGAATGGACACGAATGGAATCATCATCGAATGGAATCAAATGGAGTCATCAAATGGACTCGAATGGAATCATCATCAAATAGGATCATCAATAAAATGGAATCGAATGGAGTCATC TR:VR 573:3 426:0 chr2 90393817 d_723 C . Too_low_VAF END=90394110;SVTYPE=DEL;SVLEN=-293 TR:VR 605:4 423:1 chr20 28549026 d_782 T . Too_low_VAF END=28549149;SVTYPE=INS;SVINSLEN=125;SVINSSEQ=CTGTAAGTGGAAACTTGGAGTGCTTTTAAGGCCTATGGTGGAAAAGGAAATATCTTCCCATAAAAAGTAGACAGAAGAATTCTCAGTAACTACTTTGTGATGTGTGTACTCAACTCACAGAGTTG TR:VR 61:3 38:1 chr22 10722000 d_871 T . Too_low_VAF END=10722196;SVTYPE=DEL;SVLEN=-196;SVINSLEN=1;SVINSSEQ=C TR:VR 166:5 104:0 chr13 49061358 r_54_0 C ]chr8:35509522]CCCTCTCCCCTCCCCTCCCTTCCCCTCTCCCCCCCCCTGCCTTCCCCTCTCTCCCTCTCCCCCTCTCCCCTCTCTCCTCCCCCTCCCCTCCCCTCTCCTCTCCCCTCCCTCCCCTCTCCCCTCTCCCCTCCCCTGCCTTCCTCCCTC . Too_low_VAF SVTYPE=BND;MATEID=r_54_1;SVINSLEN=146;SVINSSEQ=CCCTCTCCCCTCCCCTCCCTTCCCCTCTCCCCCCCCCTGCCTTCCCCTCTCTCCCTCTCCCCCTCTCCCCTCTCTCCTCCCCCTCCCCTCCCCTCTCCTCTCCCCTCCCTCCCCTCTCCCCTCTCCCCTCCCCTGCCTTCCTCCCT TR:VR 108:5 70:0 chr8 35509522 r_54_1 C CAGGGAGGAAGGCAGGGGAGGGGAGAGGGGAGAGGGGAGGGAGGGGAGAGGAGAGGGGAGGGGAGGGGGAGGAGAGAGGGGAGAGGGGGAGAGGGAGAGAGGGGAAGGCAGGGGGGGGGAGAGGGGAAGGGAGGGGAGGGGAGAGGG[chr13:49061358[ . Too_low_VAF SVTYPE=BND;MATEID=r_54_0;SVINSLEN=146;SVINSSEQ=AGGGAGGAAGGCAGGGGAGGGGAGAGGGGAGAGGGGAGGGAGGGGAGAGGAGAGGGGAGGGGAGGGGGAGGAGAGAGGGGAGAGGGGGAGAGGGAGAGAGGGGAAGGCAGGGGGGGGGAGAGGGGAAGGGAGGGGAGGGGAGAGGG TR:VR 108:5 70:0 chr14_GL000225v1_random 47745 d_342 C . Too_low_VAF END=47890;SVTYPE=DEL;SVLEN=-145;SVINSLEN=9;SVINSSEQ=CCCTGTAGG TR:VR 665:3 508:1 chr2 90386450 d_684 T . Too_low_VAF END=90386796;SVTYPE=DEL;SVLEN=-346 TR:VR 588:3 405:0 chrUn_GL000220v1 127024 i_1063 T . Too_low_VAF END=127024;SVTYPE=INS;SVINSLEN=4127;SVINSSEQ=GTCTGCCTCTCTCTTTCTTTTTCTGTGTCTCTCTGTCGGTCTCTCTCTCTCTGTCTGTCTGTCTGTCTCTCTCTCTCTCTCTCTGTGCCTATCTTCTGTCTTACTCTCTTTCTCTGCCTGTCTGTCTGTCTCTCCCTCCCTTTCTGTTTCTCTCTCTCTCTCTCTCTCTCTCCCTCTCCCTGTCTGTTTCTCTCCGTCTCTCTCTCTTTCTGTCTGTTTCTCACTGTCTCTCTCTGTCCATCTCTCTCTCTCTCTGTCTGTCTCTTTCGTTCTCTCTGTCTGTCTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCACTCTCTGTGTGTATCTTCTGTCTTACTCTCCTTCTCTGCCTGTCCGTCTGTCTGTCTGTCTGTCTGTCTCTCTCTCCCTTTCTGTCTCTCTCTCTCTCTGTCCCTCTCTCTTTCTGTCTGTTCCTCTCTCTCTCTCTGTCTCTGTCTTTCTCTGTCTGTCTGCCTCTCTCTTTCTTTCTCTTTCTGTGTCTCTCTGTCTCTCTCTCTGTGCCTATCTTCTGTCTTACTCTCTTTCTCTGCCTGCCTGCCTGTCTGTCTGTCTGTCTCTCTCTGTCTCTCTCCCTGCCTTTCTGTTTCTCTCTCTCTCTCCCTCTCTCTCTCCCTCTCTCGCTCTCTCTGTCTTTCTCTCTTTCTCTCTGTTTCTCTGTCTCTCTCTGTCCGTCTCTGTCTTTTTCTGTCTGTCTCTCTCTTTCTTTCTGTCTGTCTCTGTCTCTGTCTCTCTCTCTCTCTCTGCTTGTCTCTCTCACTGTGTCTGTCCTCTGTCTTACTCTCCTTCTCTGCCTGTCCGTCTGTCTGTCTGTCTCTCTCTCTCTCCCTCCCTTTCTGTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCCTGTTTCTCTTTCTCTCTCTGTCTGTCTCTGTCTTTCTCTGTCTGTCTCTTTCTCTGTCTGTCTGTCTCCTTCTCTCTGTCTCCGTCTCTGTCTCTCTCTCTCTGTCTCTCTCTCTCTGCCTGTCTCACTGTGTCTGTCTTCTGTCTTATTCTCTTTCTCTGTCTGTCTGTCTCTCTCTCTCCCTTCCTGTCTCTTTCTCTCTCTCTCTCTCTTTCTGTCTGTTTCTCTCTGCCTGTCTCCGTCTTTCTCTGTCTGCCTCTCTCTTTCTTTTTCTGCGTCTCTCTGTCTCTCTCTCTCTGTGCCTATCTTCTGTCTTACTCTGTTTCTCTGCCTGCCTGTCTGTCTGTCTGTCTCTCTCTCTCTCTGTCTCTCTCTCTTTCTGTCTGTTTCTCTCTGTCTCTCTGTCCATCTCTGTCTTTCTCTGTCCGTCTCTCTCTTTCTCCCTGTCTCTGTCTCTGCCTCTGCCTCTCTCTCTCTCTCTGTCTCTCTCTTTCTATCTGTTTCTCTCTGTCTCTCTGTCCATCTCTGTCTTTCTCTGTCTGTCTCTCTCTTTCTCCCTGTCTCTGTCTCTGCCTCTCTCTCTCTCTCTCTGTCTGTCTCTCTCACTGTGTGTGTGTCTCTGTCTCTGCCTCTCTCTCTCTCTCTCTCTCTGTCTGTCTCTCTCACTGTGTGTGTCTGTCTTCTGTCTTACTCTCCTTCTCTGCCTGTCCGTCTGTCTGTCTGTCTCTCCCTCTCTCTCCCTCCCTTTCTGTTTCTCTCTCTCTCTCTCTCTCTTTCTGTCTGTTTCTCTCTTTCTCTCTCTGTCTGTCTCTTTCTCTGTCTGTCTGTCTCTCTCTTTCTTTTTCTCTGTCTCTCTGTCTCTCTCTGTGCCTGTCTCTCTGTCTGTGCCTATCTTCTGTCTTACTCTCTTTCTCTGGCTGACTGCCTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCCTGTCTCCGTCCCTCCCTCCCTGTCTGTCTGTTTCTCTCTCTGTCCATTTCTGTCTGTCTCTTTCTCTTTCTCTCTCTTTCTTTCTCTCTGTCTCTCTCTGTCTCTCTCTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCCTTTCTCTCTCACTGTGTCGGTCTTCTGTCTTACTCTCTTTCTCTGCCTGCCTCTCTGTCTGTCTGTCTGTCTCTCTCCCTCCATGTCTCTCTCTCTCTCTCTCTCTCACTCACTGTCTCTCCGTCTCTCTCTCTTTCTGTCTGTTTCTCTCTGTCTCTGTCTTTCTGTGTGTCTGTCTGTCTCTCTCTCTCTATTTGTCTTTCTCCCTCCCTGTCTGTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTGTCTGTTTCTCTCTATCTCTCGCTGTCCATCTCTGTCTTTCTATGTCTGTCTCTTTCTCTGTCAGTCTGTCAGACACCCCCGTGCCGGGTAGGGCCCTGCCCCTTCCACGAAAGTGAGAAGCGCGTGCTTCGGTGCTTAGAGAGGCCGAGAGGAATCTAGACAGGCGGGCCTTGCTGGGCTTCCCCACTCGGTGTATGATTTCGGGAGGTCGAGGCCGGGTCCCCGCTTGGATGCGAGGGGCATTTTCAGACTTTTCTCTCGGTCACGTGTGGCGTCCGTACTTCTCCTATTTCCCCGATAAGCTCCTCGACTTCAACATAAACGGCGTCCTAAGGGTCGATTTAGTGTCATGCCTCTTTCACCGCCACCACCGAAGATGAAAGCAAAGATCGGCTAAATACCGCGTGTTCTCATCTAGAAGTGGGAACTTACAGATGACAGTTCTTGCATGGGCAGAACGAGGGGGACCGGGGACGCGGAAGCCTGCTTGAGGGAGGAGGGGTGGAAGGAGAGACAGCTTCAGGAAGAAAACAAAACACGAATACTGTCGGACACAGCACTGACTACCCGGGTGATGAAATCATCTGCACACTGAACACCCCCGTCACAAGTTTACCTATGTCACAGTCTTGCTCATGTATGCTTGAACGACAAATAAAAGTTCGGGGGGAGAAGAGAGAGAGAGAGAGAGAGACGGGGAGAGAGGGGGAGAGGGGGGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAAGTAAAACCAACCACCACCTCCTTGACCTGAGTCAGGGGGTTTCTGGCCTTTTGGGAGAACGTTCAGCGACAATGCAGTATTTGGGCCCGTTCTTTTTTTTCTTCTTCTTCTTTTCTTTCTTTTTTTTTGGACTGAGTCTCTCTCGCTCTGTCACCCAGGCTGCGGTGCGGTGGCGCTCTCTCGGCTCACTGAAACCTCTGCTTCCCGGGTTCAAGTGATTCTTCTTCGGTAGCTGGGATTACAGGTGCGCACCATGACGGCCGGCTCATCGTTCTATTTTTAGTAGAGACGGGGTTTCTCCACGTTGGCCACGCTGGTCTCGAACTCCTGACCACAAATGATCCACCTTCCTGGGCCTCCCAAAGTGCTGGAAACGACAGGCCTGAGCCGCCGGGATTTCAGCCTTTAAAAGCGCGGGCCCTGCCACCTTTCGCTGCGGCCCTTACGCTCAGAATGACGTGTCCTCTCTGCCATAGGTTGACTCCTTGAGTCCCCTAGGCCATTGCACTGTAGCCTGGGCAGCAAGAGCCAAACTCCGTCCCCCCACCTCCCCGCGCACATAATAACTAACTAACTAACTAACTAACTAAAATCTCTACACGTCACCCATAAGTGTGTGTTCCCGTGAGGAGTGATTTCTAAGAAATGGTACTGTACACTGAACGCAGTGGCTCACGTCTGTCATCCCGAGGTCAGGAGTTCGAGACCAGCCCGGCCAACGTGGTGAAACCCCCGTCTCTACTGAAAATACGAAATGGAGTCAGGCGCCGTGGGGCAGGCACCTGTAACCCCAGCTACTCGGGAGGCTGGGGTGGAAGAATTGCTTGAACCTGGCAGGCGGAGGCTGCAGTGACCCAAGATCGCACCACTGCACTACAGCCTGGGCGACAGAGTGAGACCCGGTCTCCAGATAAATACGTACATAAATAAATACACACATACATACATACATACATACATACATACATACATACATACATACATCCATGCATACAGATATACAAGAAAGAAAAAAAGAAAAGAAAAGAAAGAGAAAATGAAAGAAAAGGCACTGTATTGCTACTGGGCTAGGG TR:VR 894:3 871:0 chrX 363718 i_1103 A . PASS END=363718;SVTYPE=INS;SVINSLEN=98;SVINSSEQ=CCATCCCACAGTGCATCTCCCCGTGCCCACCATCCCACAGTGCATCTCCCCCGAGCCCACGATCCCACAATGCATCTCCCCGAGCTCCACGATCCCAC TR:VR 21:4 20:0 chr1 169251549 r_14_0 T [chr20:28512720[TCACCACAGACCTCAACGTGCTCCAAATGTCCACTTCCAGATACTACAAAAGGAGTGTTTCAAACCTGCTCTATGAAAGGGAATGTTCAACTCTGTGAATTGAATGCCAACATCGCAAAGAAGTTTCTGAGAATGCTGCTGTCTACA . Too_low_VAF SVTYPE=BND;MATEID=r_14_1;SVINSLEN=146;SVINSSEQ=TCACCACAGACCTCAACGTGCTCCAAATGTCCACTTCCAGATACTACAAAAGGAGTGTTTCAAACCTGCTCTATGAAAGGGAATGTTCAACTCTGTGAATTGAATGCCAACATCGCAAAGAAGTTTCTGAGAATGCTGCTGTCTAC TR:VR 146:3 85:0 chr20 28512720 r_14_1 A [chr1:169251549[GTAGACAGCAGCATTCTCAGAAACTTCTTTGCGATGTTGGCATTCAATTCACAGAGTTGAACATTCCCTTTCATAGAGCAGGTTTGAAACACTCCTTTTGTAGTATCTGGAAGTGGACATTTGGAGCACGTTGAGGTCTGTGGTGAA . Too_low_VAF SVTYPE=BND;MATEID=r_14_0;SVINSLEN=146;SVINSSEQ=GTAGACAGCAGCATTCTCAGAAACTTCTTTGCGATGTTGGCATTCAATTCACAGAGTTGAACATTCCCTTTCATAGAGCAGGTTTGAAACACTCCTTTTGTAGTATCTGGAAGTGGACATTTGGAGCACGTTGAGGTCTGTGGTGA TR:VR 146:3 85:0 chr1 61838974 r_4 A . PASS END=61877729;SVTYPE=DUP;SVLEN=38755 TR:VR 89:8 47:0 chr15 50364048 r_71_0 G [chr17:10372064[T . PASS SVTYPE=BND;MATEID=r_71_1 TR:VR 59:10 36:0 chr17 10372064 r_71_1 T [chr15:50364048[T . PASS SVTYPE=BND;MATEID=r_71_0 TR:VR 59:10 36:0 chr3 82405233 r_160_0 G G[chr7:2009648[ . PASS SVTYPE=BND;MATEID=r_160_1 TR:VR 88:10 34:0 chr7 2009648 r_160_1 A ]chr3:82405233]A . PASS SVTYPE=BND;MATEID=r_160_0 TR:VR 88:10 34:0 chr1 61856252 d_23 T . PASS END=61856619;SVTYPE=DEL;SVLEN=-367 TR:VR 47:13 26:0 chr7 56457891 r_223_0 A A]chr7:56458106] . PASS SVTYPE=BND;MATEID=r_223_1 TR:VR 79:12 22:0 chr7 56458106 r_223_1 A A]chr7:56457891] . PASS SVTYPE=BND;MATEID=r_223_0 TR:VR 79:12 22:0 chr9 133475923 r_259 T . PASS END=133611808;SVTYPE=DUP;SVLEN=135885 TR:VR 77:8 42:0 chr1 173622656 i_47 T . PASS END=173622656;SVTYPE=INS;SVINSLEN=315;SVINSSEQ=TAAGGTGCTTTGAAGACTTTTTCCTTTTCTTTTTGAGATGGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCAAGATCTTGGCTCACTGCAATCTTTGCCTCTTGGGTTCAAATGGTTCTCCTGCTTCAGCCTCCCATGTAGCTGGGACTACAGGTGCCTGCCACCACACCCAGTTAATTTTTGTATTTTTACTAGAGACGGGGTTTCACCATTTTGGCCAGGCTGGCCTCGAACTCCTGACCTCAGGTGATCCACCCACCTCAGCCTCCCAAAGTGCTGAGATTATAGACATGAGCCACTGCGCCCAAC TR:VR 41:3 20:0 chr10 97502831 r_22_0 G [chrUn_KI270442v1:132825[A . PASS SVTYPE=BND;MATEID=r_22_1 TR:VR 165:14 100:0 chrUn_KI270442v1 132825 r_22_1 A [chr10:97502831[A . PASS SVTYPE=BND;MATEID=r_22_0 TR:VR 165:14 100:0 chr13 87610721 r_55_0 A [chr17:52213643[C . PASS SVTYPE=BND;MATEID=r_55_1 TR:VR 60:16 43:0 chr17 52213643 r_55_1 C [chr13:87610721[C . PASS SVTYPE=BND;MATEID=r_55_0 TR:VR 60:16 43:0 chr14_GL000225v1_random 110395 i_237 A . Too_low_VAF END=110395;SVTYPE=INS;SVINSLEN=686;SVINSSEQ=TAAATCTCACTGTAGGCAAAGCCTAGAGCAAGTTTTACGTCACCTCAGCGATCAGTGCAGTGATATGTCCCAGTGTCCCTCTAGGCAGGCTTAGACTTGGCAGTCTCATCTCCTGGGTGATCAATGCAGAGGTAAGTCACAATGGCACCATAGGCAGAGCCTAGACAAGAGTTACATAACCCGGGTGATCTCGCAGTGATGTCACAACGCTCTGCATGCCCCAGAGGCCCAGATCAAGATAGAGTACATTACCTGGGTTATCAGTGCAGGGATGTGTCACAATGCCCCCTGTAGGCAGAGCATAGAGAAGAGTTGCATCACCTGGGTGATCAGTGCAGAGATATGTCACTGCATGTCCCCTGTAGGATAGAGCATAGAGAAGAGTTGCATCACTTGGGTGATCAGTGCAGAGATATGTCACTTTGCAGCAGGTGCAGGCAGTTCCTAGGCAGGTTACATCACCTTTGTCATCAGTTCAGGGATATGTGAAAACGGCTGCCTAGGCAGAGCCTAGACACTACCTCACCTAGTGGATCAGTGCCGAGATATGCTCAGTATCCACTGTAGGCAGATCCTGGCTGGGAGTTAAATCACCGTGATCAATGCAGGGAAATCAGCCTGCCTCTTTCGTAAGAGGGTACACAACAGTCTCTATCAGCTTAGCAGCAGTGCAGCCCCCGTTCAGA TR:VR 335:4 341:1 chr15 53793560 r_72_0 C ]chr3:70877849]A . Too_low_VAF SVTYPE=BND;MATEID=r_72_1 TR:VR 83:3 43:0 chr3 70877849 r_72_1 A A[chr15:53793560[ . Too_low_VAF SVTYPE=BND;MATEID=r_72_0 TR:VR 83:3 43:0 chr7 56457883 r_224_0 A [chr8:67253494[T . PASS SVTYPE=BND;MATEID=r_224_1 TR:VR 138:12 50:0 chr8 67253494 r_224_1 T [chr7:56457883[T . PASS SVTYPE=BND;MATEID=r_224_0 TR:VR 138:12 50:0 chr8 1180932 i_967 A . PASS END=1180932;SVTYPE=INS;SVINSLEN=113;SVINSSEQ=CTTACTGTCAGTGTGGGTGGCTGTGCAAGGGCAGTACACTTACTGTCGAGTGTGGGTGGCTGTGCCAGGGCAGTCACTTACTGTCGAGTGTGGGTGGCTGTGCAAGGGCAGTC TR:VR 37:4 25:0 chr9 133476156 i_1040 A . PASS END=133476161;SVTYPE=INS;SVINSLEN=310;SVINSSEQ=CAGTGTGGAGCGAAGCCAGGAGGCTCAAGGGAGCTGCAGTGTGGCTGGACACAGCCTCGGGCCGGGGTGCAGTGTGGCTGGACACAGCCTCGGGCCGGGGTGCAGTGTGGCTGGACACAGCCTCGGGCCGGGGTGCAGTGTGGCTGGACACAGCCTCGGGCCGGGGTGCAGTGTGGCTGGACACAGCCTCGGGCCGGGGTGCAGTGTGGCTGGACACAGCCTCGGGCCGGGGTGCAGTGTGGCTGGACACAGCCTCGGGCCGGGGTGCAGTGTGGCAGGGTTATTTTTATTTTATTTTATTTTATTTTAT TR:VR 44:8 24:0 chr13 87804565 r_56_0 C C]chr20:29336582] . PASS SVTYPE=BND;MATEID=r_56_1 TR:VR 136:12 62:0 chr20 29336582 r_56_1 A A]chr13:87804565] . PASS SVTYPE=BND;MATEID=r_56_0 TR:VR 136:12 62:0 chr3 10273837 d_924 C . PASS END=10273954;SVTYPE=DEL;SVLEN=-117;SVINSLEN=18;SVINSSEQ=ACAAGTAAAGAGATACAG TR:VR 35:16 22:0 chr3 87295289 d_932 C . PASS END=87295439;SVTYPE=DEL;SVLEN=-150 TR:VR 35:3 29:0 chr11 10249427 i_124 A . PASS END=10249427;SVTYPE=INS;SVINSLEN=180;SVINSSEQ=TTTTGGCCTGGCATGGTTGTTCATGCCTGTAAAGCACTTTGGGAGGCTGAGGAGGGCAGATCACTTGAGATTAGGAGTTGCAGTGGTTGCAGTGAGTCGAGATCATACCACTGCACCCCAGCCTGTGCCAGACAGTGAGACTCCATCTTAAAAAAAAATAAAAAAAAAATAAAAATTTTT TR:VR 34:3 28:0 chr13 87804565 r_57_0 C C]chrUn_KI270442v1:260141] . PASS SVTYPE=BND;MATEID=r_57_1 TR:VR 115:9 61:0 chrUn_KI270442v1 260141 r_57_1 A A]chr13:87804565] . PASS SVTYPE=BND;MATEID=r_57_0 TR:VR 115:9 61:0 chr20 61946656 d_823 G . PASS END=61946947;SVTYPE=DEL;SVLEN=-291 TR:VR 51:3 18:0 chr22 10724765 d_875 C . Too_small_size;Too_low_VAF END=10724785;SVTYPE=DEL;SVLEN=-20 TR:VR 140:5 82:0 chr11 10250623 i_125 T . PASS END=10250623;SVTYPE=INS;SVINSLEN=359;SVINSSEQ=CCCTTTTTTTTTTTTTTTTTTTTTTTTTGCGATAGAGTTTTGCTCTTGTTGCCCAGGTTGGAGTGTAATGGCACAATCTCAGCTGACTGCAACCTCCATCTCCTGGATTCAAGCGATTCTCCTGTCTCAGCCTCCCCAGTGGCTGGTATTACAGGTGCCTGCTACCACACTGGCTAATTTTTGTATTTTTAGTAGAGACAGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCCACCCACCTCAGTCTCCCAAAGCGCTGGGATTACAGGCATGAGCCACCATGCCCAGCCCAACTGTCATTTTCAATGAATGTTTTCTGATTGTATAAAAGCTTTCCCAT TR:VR 33:3 29:0 chr16 85412074 d_529 C . PASS END=85412122;SVTYPE=DEL;SVLEN=-48;SVINSLEN=14;SVINSSEQ=GGATAATCCTCACT TR:VR 28:3 15:0 chr3 87974067 r_161_0 G [chr3:87975327[A . PASS SVTYPE=BND;MATEID=r_161_1 TR:VR 40:3 24:0 chr3 87975327 r_161_1 A [chr3:87974067[A . PASS SVTYPE=BND;MATEID=r_161_0 TR:VR 40:3 24:0 chrX 4950326 r_266 A . PASS END=5039207;SVTYPE=DEL;SVLEN=-88881 TR:VR 36:14 50:0 chr1 177004573 r_15 C . PASS END=177013342;SVTYPE=DEL;SVLEN=-8769 TR:VR 45:17 33:0 chr17 49281345 r_93_0 A [chr17:49362419[T . PASS SVTYPE=BND;MATEID=r_93_1 TR:VR 74:12 40:0 chr17 49362419 r_93_1 T [chr17:49281345[T . PASS SVTYPE=BND;MATEID=r_93_0 TR:VR 74:12 40:0 chr17_KI270730v1_random 44590 d_582 T . PASS END=44600;SVTYPE=INS;SVINSLEN=165;SVINSSEQ=GCAATGGAATGGCACAGAGTGGAATTGAGAGGAATGGAATCGAATGGAGTGGAATTGAGAGGAATGGAATCGAATGGAATGGAATCGAATGCAATTGACTGGAATTGAATGACCTCGAATGGAATGTACTGGAATAAAATTTAATGGAACGGATTGGAATCAAAA TR:VR 32:5 26:0 chr22 10725500 d_877 C . Too_low_VAF END=10725650;SVTYPE=DEL;SVLEN=-150 TR:VR 140:3 79:0 chrX 52403845 r_271 A . PASS END=55652524;SVTYPE=DUP;SVLEN=3248679 TR:VR 85:7 52:1 chr15 59762338 r_73_0 A AAAGTATTGAGTA]chr15:60129435] . PASS SVTYPE=BND;MATEID=r_73_1;SVINSLEN=12;SVINSSEQ=AAGTATTGAGTA TR:VR 80:6 46:0 chr15 60129435 r_73_1 A ATACTCAATACTT]chr15:59762338] . PASS SVTYPE=BND;MATEID=r_73_0;SVINSLEN=12;SVINSSEQ=TACTCAATACTT TR:VR 80:6 46:0 chr17 49337977 r_94_0 A A]chr17:49343869] . Too_low_VAF SVTYPE=BND;MATEID=r_94_1 TR:VR 63:3 30:0 chr17 49343869 r_94_1 A A]chr17:49337977] . Too_low_VAF SVTYPE=BND;MATEID=r_94_0 TR:VR 63:3 30:0 chr3 90697107 d_933 C . PASS END=90697214;SVTYPE=INS;SVINSLEN=107;SVINSSEQ=AAAGCACACTAAATATACACTGGCAAATTCCAGAAAAAGGGTGTTTCAAAGCTGCTGTATCAACAGAAAGTTTAAAGTCTGTGAGGTGAACACACAAATCACAAAGT TR:VR 80:4 37:0 chr7 131463984 r_228_0 A A]chr7:131508239] . PASS SVTYPE=BND;MATEID=r_228_1 TR:VR 64:9 36:0 chr7 131508239 r_228_1 G G]chr7:131463984] . PASS SVTYPE=BND;MATEID=r_228_0 TR:VR 64:9 36:0 chr17 49375734 r_95_0 A ACTTGAGGTCAAGAGTTCAAGACCAGCCTGGCCAACAT]chr8:38808926] . Too_low_VAF SVTYPE=BND;MATEID=r_95_1;SVINSLEN=37;SVINSSEQ=CTTGAGGTCAAGAGTTCAAGACCAGCCTGGCCAACAT TR:VR 139:5 36:0 chr8 38808926 r_95_1 C CATGTTGGCCAGGCTGGTCTTGAACTCTTGACCTCAAG]chr17:49375734] . Too_low_VAF SVTYPE=BND;MATEID=r_95_0;SVINSLEN=37;SVINSSEQ=ATGTTGGCCAGGCTGGTCTTGAACTCTTGACCTCAAG TR:VR 139:5 36:0 chr15 63265698 d_482 G . PASS END=63265745;SVTYPE=DEL;SVLEN=-47 TR:VR 28:7 24:0 chr4 2567637 r_168 G . Too_low_VAF END=47773124;SVTYPE=DEL;SVLEN=-45205487 TR:VR 72:3 49:0 chr7 1393398 r_208 G . PASS END=27906236;SVTYPE=DUP;SVLEN=26512838 TR:VR 106:9 39:0 chr12 19936682 r_39_0 G [chr12:19939926[A . PASS SVTYPE=BND;MATEID=r_39_1 TR:VR 33:4 36:0 chr12 19939926 r_39_1 A [chr12:19936682[A . PASS SVTYPE=BND;MATEID=r_39_0 TR:VR 33:4 36:0 chr2 87411276 d_648 G . Too_low_VAF END=87411579;SVTYPE=DEL;SVLEN=-303 TR:VR 138:6 105:1 chrX 58330204 r_272 A . PASS END=76146024;SVTYPE=DUP;SVLEN=17815820;SVINSLEN=1;SVINSSEQ=G TR:VR 68:4 34:0 chr1 91669042 d_29 A . PASS END=91669323;SVTYPE=DEL;SVLEN=-281;SVINSLEN=31;SVINSSEQ=CCAAGTGTGTCTACGTACCGGAACTGGTCTG TR:VR 37:7 19:0 chr12 19937040 d_268 T . PASS END=19937093;SVTYPE=DEL;SVLEN=-53 TR:VR 28:4 32:0 chr14_GL000225v1_random 56318 d_351 G . Too_low_VAF END=56457;SVTYPE=DEL;SVLEN=-139;SVINSLEN=4;SVINSSEQ=TTAC TR:VR 659:5 507:1 chr16 89236713 r_79_0 C C]chr3:37043348] . PASS SVTYPE=BND;MATEID=r_79_1 TR:VR 51:17 41:0 chr3 37043348 r_79_1 C C]chr16:89236713] . PASS SVTYPE=BND;MATEID=r_79_0 TR:VR 51:17 41:0 chr3 131102131 i_708 T . PASS END=131102179;SVTYPE=INS;SVINSLEN=248;SVINSSEQ=CTCTTAAAGACAGCGGACAGTTGGATCTTGTGTTTTTATCCAGCTTGCCACTCTATGTCTTTTACATGCAGTTTTTGATTTCTGTAGGATTAGTTATAATATCATCATTGTCATTTCTCATTGGACTTATTTGGATCTCCTTTTTTTCTTTGTTAATATAGCTAGGGTGGTCTGTCTTATTTATTCTTTTGAAGAACCAATACTTGGTTTTCTGCATTGATCTTGTGTATAGATTTTTGCATCTCAGC TR:VR 38:4 18:0 chr1 92846814 i_25 T . PASS END=92846817;SVTYPE=INS;SVINSLEN=72;SVINSSEQ=GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCACGT TR:VR 56:4 23:0 chr12 2032652 d_267 C . PASS END=2032730;SVTYPE=DEL;SVLEN=-78;SVINSLEN=10;SVINSSEQ=TGAACTGTGT TR:VR 25:5 19:0 chr14_GL000225v1_random 56318 d_352 G . Too_low_VAF END=56735;SVTYPE=DEL;SVLEN=-417;SVINSLEN=83;SVINSSEQ=TTACATCTCCTGGGTGATCAGTGCAGAGATATTGTCATACAAAGCCCCCTGTAGACAGAGAGTGACACAAGAGTTACATCAAA TR:VR 658:5 520:0 chr16 89323631 r_80_0 A ]chr3:39889451]T . PASS SVTYPE=BND;MATEID=r_80_1 TR:VR 52:19 33:0 chr3 39889451 r_80_1 T T[chr16:89323631[ . PASS SVTYPE=BND;MATEID=r_80_0 TR:VR 52:19 33:0 chr2 90387683 i_455 T . Too_low_VAF END=90387683;SVTYPE=INS;SVINSLEN=636;SVINSSEQ=CATCAACTGGAAAAGAATGGAATCATCATCGAATGGAAATGAATAGAATCACAGAATGAAATCGAATGGAATCATCATCGAATGGAGTCTAATGGAATAATCATCGAATGGAATAGAATGGAATCATCGAGTGGACACGAATGGAATCATCATTGAATGGAATCGAATAGAATCATCAAATGGACTTGAATGGAAACAACATCGAATGCAATCGAATTTAGACATTGAATGGCATTGAGTGGAATCATAATTGAATGGAATCTAAAGGAATCATCGAATGGACTCGAGTGGAATCATCGAATGGACACGAGTGGAATCATCATCGAATGGAATCGACTGTAATCATCGATTGGACTCGAATGGAATCATCATTGAATGGAATCGAATGGAATCAATCGAATGGACTCGAATAGAATCATCATCGAATGGAATCGAATGGAATCAAAGAATGGACTCTAATGGAGTCATCATCAAATGGAATCTAATGGAATCATCTAATGGACCTGAAAGGAATCATCATTGAATGGAATCGAATGGAATCATCGAATGGACTCGAATGGAATCATCATCGAATGGAATCTAATGGAATCATTGAATGGACTCGAATGGAATAATCGAATGGGTTTGAGTGGAAAC TR:VR 606:4 424:1 chr2 90398496 d_731 G . Too_low_VAF END=90398528;SVTYPE=INS;SVINSLEN=32;SVINSSEQ=GAATCTTCTAATGGACTCGAAGGGAATCATCA TR:VR 582:7 411:0 chr1 190181686 r_17 T . PASS END=190374874;SVTYPE=DEL;SVLEN=-193188 TR:VR 65:18 44:0 chr12 21524734 r_40_0 T T]chrX:28242244] . PASS SVTYPE=BND;MATEID=r_40_1 TR:VR 56:7 38:0 chrX 28242244 r_40_1 G G]chr12:21524734] . PASS SVTYPE=BND;MATEID=r_40_0 TR:VR 56:7 38:0 chr14_GL000225v1_random 56318 d_353 G . Too_low_VAF END=56866;SVTYPE=DEL;SVLEN=-548;SVINSLEN=6;SVINSSEQ=CTAAGG TR:VR 655:5 519:1 chr5 49656649 i_814 T . Too_small_size;Too_low_VAF END=49656649;SVTYPE=INS;SVINSLEN=27;SVINSSEQ=CCATTCCTTTCCATTCCACTCGATTAT TR:VR 430:3 225:1 chr8 135437538 r_255 T . PASS END=135626713;SVTYPE=DEL;SVLEN=-189175 TR:VR 68:4 47:0 chrX 66216208 r_273 C . PASS END=66782074;SVTYPE=DUP;SVLEN=565866 TR:VR 86:6 47:0 chr14 105612976 r_60 A . Too_low_VAF END=105751153;SVTYPE=DUP;SVLEN=138177;SVINSLEN=6;SVINSSEQ=AAAATG TR:VR 75:3 35:0 chr14_GL000225v1_random 119525 d_457 G . Too_low_VAF END=119898;SVTYPE=DEL;SVLEN=-373;SVINSLEN=36;SVINSSEQ=CTTGCTGGCAGGGTGTATTGTGACATATCTCTGCAC TR:VR 718:3 695:1 chr14_GL000225v1_random 56327 d_354 C . Too_low_VAF END=56550;SVTYPE=DEL;SVLEN=-223;SVINSLEN=19;SVINSSEQ=CTGGGTGATCAGTGCAGAA TR:VR 637:4 516:1 chr17 59418051 r_97_0 G [chr8:82556187[A . PASS SVTYPE=BND;MATEID=r_97_1 TR:VR 119:11 50:0 chr8 82556187 r_97_1 A [chr17:59418051[A . PASS SVTYPE=BND;MATEID=r_97_0 TR:VR 119:11 50:0 chr2 90398573 i_490 C . Too_low_VAF END=90398573;SVTYPE=INS;SVINSLEN=368;SVINSSEQ=CTCATCGAATGGAATCATACGGAAACATCACAGAATGGAATTGAATGGAATCATCAGTTGGACTCGAATGGAATCATCAAATGGACTCGAAGGATCGTCAAATGGACTCGAATGGAATCATCATCGAATGGAATCGAATGGGATCATCGAAAGGACTCTTGAATCGAAATCTTCAAAGGGACTCAAAGGGAATCATTGTAGAATGGAAATGAATAGAGTCATCAGACAGCCTCGAATGGAAGCATCATTGAATGGAATTGATGGGAAACATCGAATTCACTCGAATGGAATCATCATCTGATGGAATTCAAAGGAATCATCGAATGGACACAAATGGAATCATCATCAAATGCAATCCCTTGGAACGA TR:VR 588:5 405:1 chr4 7649162 r_169 A . PASS END=18291146;SVTYPE=DEL;SVLEN=-10641984 TR:VR 77:4 49:0 chr7 15158347 r_220_0 G [chr9:31033362[A . PASS SVTYPE=BND;MATEID=r_220_1 TR:VR 67:4 40:0 chr9 31033362 r_220_1 A [chr7:15158347[A . PASS SVTYPE=BND;MATEID=r_220_0 TR:VR 67:4 40:0 chr7 6014181 d_1091 C . PASS END=6014257;SVTYPE=DEL;SVLEN=-76 TR:VR 102:22 20:0 chr17 59424127 r_98_0 A A]chr9:32754973] . PASS SVTYPE=BND;MATEID=r_98_1 TR:VR 92:7 37:0 chr9 32754973 r_98_1 G G]chr17:59424127] . PASS SVTYPE=BND;MATEID=r_98_0 TR:VR 92:7 37:0 chr2 124025330 r_121 C . PASS END=124052829;SVTYPE=DEL;SVLEN=-27499 TR:VR 44:3 36:0 chr2 90387831 d_693 A . Too_low_VAF END=90387958;SVTYPE=DEL;SVLEN=-127;SVINSLEN=6;SVINSSEQ=ATCATC TR:VR 601:3 427:1 chr2 90398656 i_491 A . Too_low_VAF END=90398659;SVTYPE=INS;SVINSLEN=471;SVINSSEQ=ATCGAATGCAATCATCATTGAATGGAATCGAATGGAATCATCGAATGGTATCCAAAGGAATCACCATTGATTGCCCTCGCATGGAATCATCATCAAATAGAGTAGAAAGGAATCATTGAATGGACTCGATTGGAACCATCATTGAAATGAATCACCAAATGGAATCAAATGGAATCATCATCCAATGGAATCAAAGGGAATCATCAAATGGAATCGAATGGAATCATCATTGAATGGATTCGAATAGAATCTTTGAATGAAATTGAATGGAATCAGCATGAAATGGAATATAAAGGAATCATAGAATGGTATCGAATGGAATCATCATCGAATGGAATGGAATGGAATGGAATGGAATCAGCATCGAATGGAATCAAAAGCAATCATTCAATGGACTCTAATAGAATCATCGAATAGACTTGAATGTAATCATCATCGAATGGAGAAGAATGGAATCATCGAATGGACACG TR:VR 576:8 401:0 chr4 82037365 d_1001 A . PASS END=82037536;SVTYPE=DEL;SVLEN=-171 TR:VR 36:7 22:0 chr6 37413750 r_199_0 C [chr6:37415002[T . PASS SVTYPE=BND;MATEID=r_199_1 TR:VR 36:3 34:0 chr6 37415002 r_199_1 T [chr6:37413750[T . PASS SVTYPE=BND;MATEID=r_199_0 TR:VR 36:3 34:0 chr7 154663993 d_1131 A . PASS END=154664057;SVTYPE=INS;SVINSLEN=64;SVINSSEQ=CCATGGCGTATCGACCGTAGTGTTCATATAGTCATGGTGAATCACCATGGCGTATCAGTCTTAG TR:VR 19:3 20:0 chrUn_KI270743v1 21777 r_263 T . PASS END=131304;SVTYPE=DUP;SVLEN=109527 TR:VR 150:13 73:0 chrX 66795123 r_274 A . PASS END=76148963;SVTYPE=DUP;SVLEN=9353840 TR:VR 82:5 31:0 chr11 19859140 r_31_0 T [chr2:85191044[A . PASS SVTYPE=BND;MATEID=r_31_1 TR:VR 59:4 38:1 chr2 85191044 r_31_1 A [chr11:19859140[A . PASS SVTYPE=BND;MATEID=r_31_0 TR:VR 59:4 38:1 chr17 59603502 r_99_0 T T]chr8:81506431] . PASS SVTYPE=BND;MATEID=r_99_1 TR:VR 134:8 37:0 chr8 81506431 r_99_1 A A]chr17:59603502] . PASS SVTYPE=BND;MATEID=r_99_0 TR:VR 134:8 37:0 chr4 85069448 r_177_0 A [chrX:11707248[G . PASS SVTYPE=BND;MATEID=r_177_1 TR:VR 61:4 40:1 chrX 11707248 r_177_1 G [chr4:85069448[G . PASS SVTYPE=BND;MATEID=r_177_0 TR:VR 61:4 40:1 chr11 19861337 r_32_0 G GC]chr2:85191055] . PASS SVTYPE=BND;MATEID=r_32_1;SVINSLEN=1;SVINSSEQ=C TR:VR 60:4 39:1 chr2 85191055 r_32_1 A AG]chr11:19861337] . PASS SVTYPE=BND;MATEID=r_32_0;SVINSLEN=1;SVINSSEQ=G TR:VR 60:4 39:1 chr16 16172601 i_277 A . PASS END=16172601;SVTYPE=INS;SVINSLEN=170;SVINSSEQ=TAAATGAGTGGGTGGGATGGATAAATGGGTGGGTGGGATGGCTAAATGAGTGGGTGGGATGGATAAATGAGTGGGTGGGATGGCGGCAAATGTAGTGAACGACGATGATAAATGAGTGGGTGGGATGGATAAATGGGGTTGTGGCATGGATAGATGGATGAGTGGTGTGA TR:VR 26:5 14:0 chr17 598339 r_82_0 G [chr8:60567704[G . PASS SVTYPE=BND;MATEID=r_82_1 TR:VR 118:12 49:1 chr8 60567704 r_82_1 G [chr17:598339[G . PASS SVTYPE=BND;MATEID=r_82_0 TR:VR 118:12 49:1 chr2 90388024 i_459 A . Too_low_VAF END=90388024;SVTYPE=INS;SVINSLEN=2878;SVINSSEQ=ATCACCATTGAATGGACTCGAATGGAATCATCATTGAATGGAATCGAATGGAATCATCGAATGGACTCGAATGGAATCATCATCGATTGGAATCAAATGGAATCATCGAATGGAATCGAAAGGAATCATCATCAACTGTAATGAACTGGAATCACTGAATGGAATCGAATGGAATCGTCATCAAAAATAATCGAATAGAATAATCAAATGGAATCAAATGCAATCAACATCAAATGGAATCGAATGGAATCGAATAGAATGACATCGAATGGAATCCTCATCGAATGGAATCAAAGGGAATCATCGAATGGAATCGAAAGCAATCACTGAATGGACTCGAATACAATCATCAAATGGATTTGAAGGGAATCCTCATTGAATGGAATAGAACAAAAACATTGAATGGACACGAATGGAATCATCATCGAATGGAATCAAATGGAGTCATCAAATGGACTCGAATGGAATCATCATCAAATGGGATCATCATCAAATGGAATCGAATGGAGTCATCGAATGGACACGAATGAATGAACAAATGGACTCGAATGGAAACATCAAATAGAATCGAATGGAATCATCGAAAGGAATTGAATGGAATGATTGAATGGACTCGAATGGAATCATCTAATGGACACGAATGGAATAATCATAAAATGGAATCGAATGGAATCATCAAATGGACTCGAATGAATGGAATCATTGAATGGACTCGAATGGAATCATCGAATGGACTCAAATGGAATCATCATCAAATGGAATCGAATGGAATCATCGAATGGACTCGAATGGAATCATCATGGAATCAAACCGAATCGTCATCGAATGGAATCGAATGGAATCATCGAATGGAATTGAAAGGCAATCATCATCGAATGGAATCGAATGGAATCATCATCAAATGGAATCAAGCGGAAGGAATCATCAAATGGAATCAAATGGAATCATTGTTGAATGGAATGGAATGGAAATCATTGAATGGAATTGAATGGGATCACCAATGAACGGAATCAAATGGAATCATCTTCTAATGGAATCGAAAGGAATCATCAAATACACTCGAATGGAATCATCATCGAATGGAATCGTGTGGAATCGTCGAATGAACTGGAAATGAATCATAATCAAATGCAATTAAAATGAATCATCATCGAAAGGAATCACATGGAATCATCATCGAATGGAATCATATGGAAACATCACAGAATGGAATTGAATGGAATCATCAAATGGACTCGAATGGAATCATCAAATGTACTCGAAGGGATATCGTCAAATGGACTCGAACGGAATCATCATCGAATGGAATCGAATGGGATCATCGAAAGGACTCGAATCAAATCTTCAAAAGGACTCAAAGGCAATCATTGTAGAATGGAAATGAATAGAGTCATCAGACAGCCTCGAATGGAAACATCATTGAATGGAATTGATTGGAAACATCGAATTCACTCGAATGGAATCATCATCTGATGGAATTCAATGGAATCATCGAATGGACACAAATGGAATCATCATCAAATGGAATCCATTGGAACGATCGAATGGAATCGCATGGAATTATCAAATGGAATCGAATGGAATCATCTTCGAATGGAATCAAATGGAATCATCGAATGGAATCGAATGGAAGGAATCATCATTGAATGGAATCGAATGGAATCATCGTAATGAAAGGAATCAACGTTGAATCACCGCATGGAATCATCATCAAATAGAGTAGAAAGGAATCATTGAATGGACTCGAATGGAATCATCATCGAATGGAATTGAATGGAATCACCAAATGGAATCAAATGGAATCATCATCAAATGAAATCAAACGGAATCATCAAATGGAATCGAATGGAATCATCATTGAATGGAATTCGAATAGAATCTTCGAATGAAATTGAATGGAATCATCATCAAATGGAATCAAATGGAATCATAGAACATCGAATGGAATCATCATCGAATGGAATCATCGGAATGGAATGGAATGGAATCAGCATCGAATGGAATCAAAAGCAATCATTCAATGGACTCTAATAGAATTATCATCGAATAGACTTGAATGGAATCATCATCGAATGGAGAAGAATGGAATCATCCAATGGACACGAATGGAATCATCATCGAATGGAATCGAATGGAATCATCATAATGGACCCGAATGGAATCATCATTGCATGGAATAGAATGGAATCGTCATCGAATGGAATCGAATGGAATCATCATCAAATGGACCCTAATGGAATCATCATCGAATTGAATCGAATGGAATCATCATCAAATGGAATCGAATGGAATCATCATCAAATAGAATCGAATGGAATCATCAAATGGAATCGAATGGAGTCATTTTCTAATGCAATCGAATGAAATCATAGAATGGAATCAAATGGAATCAACATCGAATGGAATCGATTGGAATCATTATCAAATAGAATTGAAATCATGGAATGGACTCGAATGGAATCATCATCAAATGGACTCCAACGGAATCATCGAATGGACTCTAATGGAATCATCATCGAATGGAATAGAATGGAATAATCAAATGGAAACGAATGGAATCATCATCGAATGGAATCGAATGGTATCATCAAATGCACTTGAATGGAATCATCATGAAATGGAATCGAATGGAATCATCGAATGGAATCAAATGGAATCATCTTCGAGTGGAACCTAAAGGAATTGCCAAATGGACTCGAATGGAATAATCATCGTATGGAATCGAGTGGAATCATCGAATGTACTCGAATGGAATCATCGAATGGAATCGAATGGAATCATTATCGAATGGAATCGAATGGAATCATCATCGAATGGAATCGAAGGGAATCATCAAATGGAATCGAATGGAATCATCATCGAATGGAATCGAATGGAA TR:VR 626:4 427:0 chr8 138708966 r_256 A . PASS END=138718971;SVTYPE=DEL;SVLEN=-10005 TR:VR 56:6 26:0 chr1 210654216 i_50 G . PASS END=210654270;SVTYPE=INS;SVINSLEN=317;SVINSSEQ=CAATAGTGTGATGGGAATAGTGTGACGGGAATAGTGTGATGGGAATAGTGTGACAGCAGAATAGTGTGACGGGGGGAATAGTGTGATGGAATTAGTGTGACGGTGGAATAGTGTGACGGGAATAGTGTGACGGGAATAGTGTGACGATGAATAGTGTGAAGAATAGTGTGATGGGAATAGTGTGACAGTTGGAACAGTGTGACAGGGGGAATAGTGTGATGGGAATAGTGTGACGATGGGAATAGTGTGACAGTGGAATAGTGTGACGGGAATAGTGTGACCTGGGAATAGTGTGATGGGAACAGTGTGACCGGCGG TR:VR 34:6 25:0 chrUn_KI270749v1 10750 r_265_0 C [chrUn_KI270749v1:14998[A . PASS SVTYPE=BND;MATEID=r_265_1 TR:VR 42:9 38:0 chrUn_KI270749v1 14998 r_265_1 A [chrUn_KI270749v1:10750[A . PASS SVTYPE=BND;MATEID=r_265_0 TR:VR 42:9 38:0 chr1 2123584 d_3 G . Too_small_size END=2123577;SVTYPE=INS;SVINSLEN=42;SVINSSEQ=GTCGTGGTAGTTGGGTTCATGGTGGTGGTTAGGGTCGTGGTG TR:VR 44:3 14:0 chr10 102637425 i_82 A . PASS END=102637425;SVTYPE=INS;SVINSLEN=307;SVINSSEQ=ATATATATATTATATATTATATAACTATATATTATATATAATATATATATTATATATTATATAATATATATATATATATTATAATTATATAACATATATATTATATATAATATATATATTATATGGGGTTATATAACTATATATTATATATAATATATATATTATATATAATATATATATTATATATTATAACTATATATTATATATATATTATATGTTATATATTATATATTATATATATATTATATATTATATAACTATATATTATATATAATATATATATTATATATTATATAACTATATATTA TR:VR 46:3 23:0 chr12 30247616 r_41_0 G ]chr20:22231894]A . PASS SVTYPE=BND;MATEID=r_41_1 TR:VR 71:11 41:0 chr20 22231894 r_41_1 A A[chr12:30247616[ . PASS SVTYPE=BND;MATEID=r_41_0 TR:VR 71:11 41:0 chr14_GL000225v1_random 92659 d_412 A . Too_low_VAF END=93429;SVTYPE=DEL;SVLEN=-770;SVINSLEN=87;SVINSSEQ=TGGACATTGTGACACATCTCTGAACTGTTATCAGCAAGTGATGAAACTCTTGTCTAGGCTCTACCTACCGAGGGCATAGTGAGACAT TR:VR 684:3 653:0 chr16 27516254 d_493 C . Too_small_size END=27516295;SVTYPE=DEL;SVLEN=-41 TR:VR 25:15 21:0 chr18 27619990 r_100_0 C [chr20:51771926[T . PASS SVTYPE=BND;MATEID=r_100_1 TR:VR 62:4 56:0 chr20 51771926 r_100_1 T [chr18:27619990[T . PASS SVTYPE=BND;MATEID=r_100_0 TR:VR 62:4 56:0 chr21 46698601 i_661 C . Too_small_size END=46698601;SVTYPE=INS;SVINSLEN=49;SVINSSEQ=GTCTCTGCGCCGCCGGGGACGTGTGTCTCTGCGCCGCCGGGGACGTGTG TR:VR 49:3 37:0 chr4 10643 r_166_0 C [chr4:11004[G . PASS SVTYPE=BND;MATEID=r_166_1 TR:VR 32:6 30:0 chr4 11004 r_166_1 G [chr4:10643[G . PASS SVTYPE=BND;MATEID=r_166_0 TR:VR 32:6 30:0 chrUn_KI270749v1 9059 r_264_0 A A]chrUn_KI270749v1:61186] . PASS SVTYPE=BND;MATEID=r_264_1 TR:VR 96:11 65:0 chrUn_KI270749v1 61186 r_264_1 C C]chrUn_KI270749v1:9059] . PASS SVTYPE=BND;MATEID=r_264_0 TR:VR 96:11 65:0 chr17 67983020 d_553 C . PASS END=67983099;SVTYPE=DEL;SVLEN=-79;SVINSLEN=3;SVINSSEQ=ACT TR:VR 39:20 22:0 chr19 433711 i_380 A . PASS END=433744;SVTYPE=INS;SVINSLEN=325;SVINSSEQ=TCGTGAGATTGTGAGAGTGAGATCGTGAGTCTGTGAGTGAGATCATGAGTGAGTGAGATCGTGAGATTGTGAGTGAGATCGTGAGATTGTGAGTCTGAGATCGTGAGTCTGTGAGATCATGAGTGAGTTTGAGACCGTGAGATCATGAGTTCTCATGAGTGAGATCATGAGTGAGTGAGATCGTGAGTGAGGTGAGTGAGATCATGAGTGAGATCGTGAGTCTGTGAGATTGTGAGTCTGTGAGTGAGTGAGATTGTGAGATTGTGAGTCTGTGAGATCGTGAGTCTGTGAGATCGTGAGTGAGTCTGTGAATGAGATCATGAAA TR:VR 37:3 28:0 chr2 90388178 d_696 A . Too_low_VAF END=90389295;SVTYPE=DEL;SVLEN=-1117 TR:VR 628:6 436:0 chr2 90400461 i_496 A . Too_low_VAF END=90400461;SVTYPE=INS;SVINSLEN=784;SVINSSEQ=TGGAATCGAACGGAATCATCATCGAATGGAATCACCAAATGTAATTCAATCGAATCATGAATGGAATGATCATCGAATGGAATCAATTGAATGGAGTCATCGAATGGGATCCAAACGGAATCATCGAATGGAATCGATAGGAGTCATCATAGAATGGAATCGAATGGAATCATCATCGAATGGAATCTAAAACGGAATCATCGAATGGAAACGAATGGAATCATCATCGAATGGAATTGAATGGAATCATCAGAATGGAATCGAATGGAATCATCATCGAATGGAATCGAATGGAATCATCGAATGGAATCGAATGGAATCATCATCGAATGGAATCGAATGGAATCATCATCGAATGCAATCGAATAGAATCATCAAATGGATTTGAATGGAATCATCATCGAATGGAATCGAACAGAATCATTGAATGGAATTCGAATGGAATCATCATTGAATGGAATTGAATGGAATCATCGAATGGACTCGAATGGAATCATCGAATGGACATCGAATGGAATCATCATCGAATGGAATCAAATGGAATCATCGATCAGAATGGAATCGAATGGAATCATTGAATGAACTCGAATGGAATCATCATAGAATGGAATCGAATGGAATCAATATCAAATGGACCTGAATGGAATCATCATCGAATGCAATCGAAAGGAATCATCATCAAATGGAATCACATGGAATCATCATCAAATGGAATCGAATTGGATAATCATCGAATGGACTCGAATGGAATCATCGAATGAAACCGAATGGAATCATCATCGAA TR:VR 520:6 370:0 chr20 29781000 r_130_0 C [chr20:30875953[A . Too_low_VAF SVTYPE=BND;MATEID=r_130_1 TR:VR 214:5 96:0 chr20 30875953 r_130_1 A [chr20:29781000[A . Too_low_VAF SVTYPE=BND;MATEID=r_130_0 TR:VR 214:5 96:0 chr21 5253760 r_134_0 G [chrX:28242873[T . Too_low_VAF SVTYPE=BND;MATEID=r_134_1 TR:VR 180:5 75:0 chrX 28242873 r_134_1 T [chr21:5253760[T . Too_low_VAF SVTYPE=BND;MATEID=r_134_0 TR:VR 180:5 75:0 chr4 9667883 r_170 A . PASS END=9708034;SVTYPE=DUP;SVLEN=40151 TR:VR 79:6 49:0 chr16 33046546 d_495 C . Too_small_size END=33046574;SVTYPE=DEL;SVLEN=-28;SVINSLEN=20;SVINSSEQ=ACATCACCATGCCCAGCCTT TR:VR 80:4 38:1 chr18 30268384 r_101 C . PASS END=30285501;SVTYPE=DEL;SVLEN=-17117 TR:VR 53:12 33:0 chr4 9668250 r_171 G . PASS END=9672941;SVTYPE=DEL;SVLEN=-4691;SVINSLEN=6;SVINSSEQ=GACTTT TR:VR 57:6 29:0 chr7 157606503 r_230_0 C [chr7:158268005[G . PASS SVTYPE=BND;MATEID=r_230_1 TR:VR 44:6 34:0 chr7 158268005 r_230_1 G [chr7:157606503[G . PASS SVTYPE=BND;MATEID=r_230_0 TR:VR 44:6 34:0 chr8 43851679 r_235_0 A A]chr8:43865449] . PASS SVTYPE=BND;MATEID=r_235_1 TR:VR 73:5 29:0 chr8 43865449 r_235_1 T T]chr8:43851679] . PASS SVTYPE=BND;MATEID=r_235_0 TR:VR 73:5 29:0 chr10 108313642 r_23_0 C [chr5:47115700[AAGTTTCTGAGAATGCTTCTGACTAGTGTGTATGAAGATATCCCTTTTACAAAGAATTCCTCCAAGAGCTACAAATATCCACAAGCAGATTCTACAAAACAGGGTGGTTCAAAACTGCTCAATCAAAAGAAAGAGTCAACC . Too_low_VAF SVTYPE=BND;MATEID=r_23_1;SVINSLEN=140;SVINSSEQ=AAGTTTCTGAGAATGCTTCTGACTAGTGTGTATGAAGATATCCCTTTTACAAAGAATTCCTCCAAGAGCTACAAATATCCACAAGCAGATTCTACAAAACAGGGTGGTTCAAAACTGCTCAATCAAAAGAAAGAGTCAAC TR:VR 84:4 60:1 chr5 47115700 r_23_1 C [chr10:108313642[GTTGACTCTTTCTTTTGATTGAGCAGTTTTGAACCACCCTGTTTTGTAGAATCTGCTTGTGGATATTTGTAGCTCTTGGAGGAATTCTTTGTAAAAGGGATATCTTCATACACACTAGTCAGAAGCATTCTCAGAAACTTC . Too_low_VAF SVTYPE=BND;MATEID=r_23_0;SVINSLEN=140;SVINSSEQ=GTTGACTCTTTCTTTTGATTGAGCAGTTTTGAACCACCCTGTTTTGTAGAATCTGCTTGTGGATATTTGTAGCTCTTGGAGGAATTCTTTGTAAAAGGGATATCTTCATACACACTAGTCAGAAGCATTCTCAGAAACTT TR:VR 84:4 60:1 chr2 163291871 r_123 T . PASS END=163380614;SVTYPE=DUP;SVLEN=88743;SVINSLEN=1;SVINSSEQ=G TR:VR 76:4 44:0 chr2 90388342 d_698 A . Too_low_VAF END=90388389;SVTYPE=INS;SVINSLEN=246;SVINSSEQ=TGGAATCATCATCAAATAATGAACTGGAATCACTGAATGGAATCGAATGGAATCGTCATCAAAAATAATCGAATGGAATAATCAAATGGACTCAAATGGAATCAACATCAAATGGAATCGAATGGAATCATCGAATGGACATCGAATGGAATGGAATCATCGAATGGAATCGAATGGAATCATCGAATGGAATCGAATGGAATCATCATGAATGGAATCGAATACAATCATCAAATGGACTCGAAG TR:VR 606:7 430:0 chr20 62615504 r_133 C . PASS END=62668160;SVTYPE=DUP;SVLEN=52656;SVINSLEN=1;SVINSSEQ=A TR:VR 107:10 40:0 chr21 5307450 r_135_0 T TGACGTTTGCGTTCATCTCACAGAGTTGAACCTTTCTTTTGATTGAGGAGTTCGGAAACACTCTTTTTGTAGAATCTGCAGGTGGACATTTTGAATACTTTGTGGCCTATGGTAGAAATGGAAATATCTTCATATCACAAAGAGAGTGTTTCAAAACTGCTCAATCAAAAGAAAGGTTCAACTCTGTGTGATGAATGCACTCATCACAAAGAAGTTTCTCTGAATGCTTCTGTGTAGTATTAATTTGAAGATGTTTCCGTTTCCACCATAGGGCA]chrUn_KI270442v1:173357] . Too_low_VAF SVTYPE=BND;MATEID=r_135_1;SVINSLEN=274;SVINSSEQ=GACGTTTGCGTTCATCTCACAGAGTTGAACCTTTCTTTTGATTGAGGAGTTCGGAAACACTCTTTTTGTAGAATCTGCAGGTGGACATTTTGAATACTTTGTGGCCTATGGTAGAAATGGAAATATCTTCATATCACAAAGAGAGTGTTTCAAAACTGCTCAATCAAAAGAAAGGTTCAACTCTGTGTGATGAATGCACTCATCACAAAGAAGTTTCTCTGAATGCTTCTGTGTAGTATTAATTTGAAGATGTTTCCGTTTCCACCATAGGGCA TR:VR 352:3 183:0 chrUn_KI270442v1 173357 r_135_1 G GTGCCCTATGGTGGAAACGGAAACATCTTCAAATTAATACTACACAGAAGCATTCAGAGAAACTTCTTTGTGATGAGTGCATTCATCACACAGAGTTGAACCTTTCTTTTGATTGAGCAGTTTTGAAACACTCTCTTTGTGATATGAAGATATTTCCATTTCTACCATAGGCCACAAAGTATTCAAAATGTCCACCTGCAGATTCTACAAAAAGAGTGTTTCCGAACTCCTCAATCAAAAGAAAGGTTCAACTCTGTGAGATGAACGCAAACGTC]chr21:5307450] . Too_low_VAF SVTYPE=BND;MATEID=r_135_0;SVINSLEN=274;SVINSSEQ=TGCCCTATGGTGGAAACGGAAACATCTTCAAATTAATACTACACAGAAGCATTCAGAGAAACTTCTTTGTGATGAGTGCATTCATCACACAGAGTTGAACCTTTCTTTTGATTGAGCAGTTTTGAAACACTCTCTTTGTGATATGAAGATATTTCCATTTCTACCATAGGCCACAAAGTATTCAAAATGTCCACCTGCAGATTCTACAAAAAGAGTGTTTCCGAACTCCTCAATCAAAAGAAAGGTTCAACTCTGTGAGATGAACGCAAACGTC TR:VR 352:3 183:0 chr4 38699816 d_974 T . Too_small_size END=38699852;SVTYPE=DEL;SVLEN=-36 TR:VR 40:12 22:0 chr6 54835974 r_201_0 A ]chr8:65088551]G . PASS SVTYPE=BND;MATEID=r_201_1 TR:VR 80:6 50:0 chr8 65088551 r_201_1 G G[chr6:54835974[ . PASS SVTYPE=BND;MATEID=r_201_0 TR:VR 80:6 50:0 chr8 43869146 r_236_0 G [chr9:137612885[C . PASS SVTYPE=BND;MATEID=r_236_1 TR:VR 71:6 44:0 chr9 137612885 r_236_1 C [chr8:43869146[C . PASS SVTYPE=BND;MATEID=r_236_0 TR:VR 71:6 44:0 chr16 34062745 r_75_0 C [chrY:56843876[TTGGTTGATCCAGTTCAGAGATGTGTCAGCAATGCCCATGTAGGCAGAGCCTAGGCAAGAGCTACAACATCTGGAGTGATCAATGCAGTGATATGTCACTATGCCCCAATAGGCAGAGCATAGTCTCAAGTGTTACATCACTTGGGTGATCAGTGCAGAGATAGGTCACAATGCCCACATACACAGAGACTATAAAATATTCTCCATCACG . Too_low_VAF SVTYPE=BND;MATEID=r_75_1;SVINSLEN=210;SVINSSEQ=TTGGTTGATCCAGTTCAGAGATGTGTCAGCAATGCCCATGTAGGCAGAGCCTAGGCAAGAGCTACAACATCTGGAGTGATCAATGCAGTGATATGTCACTATGCCCCAATAGGCAGAGCATAGTCTCAAGTGTTACATCACTTGGGTGATCAGTGCAGAGATAGGTCACAATGCCCACATACACAGAGACTATAAAATATTCTCCATCAC TR:VR 319:3 212:1 chrY 56843876 r_75_1 G [chr16:34062745[GTGATGGAGAATATTTTATAGTCTCTGTGTATGTGGGCATTGTGACCTATCTCTGCACTGATCACCCAAGTGATGTAACACTTGAGACTATGCTCTGCCTATTGGGGCATAGTGACATATCACTGCATTGATCACTCCAGATGTTGTAGCTCTTGCCTAGGCTCTGCCTACATGGGCATTGCTGACACATCTCTGAACTGGATCAACCAAG . Too_low_VAF SVTYPE=BND;MATEID=r_75_0;SVINSLEN=210;SVINSSEQ=GTGATGGAGAATATTTTATAGTCTCTGTGTATGTGGGCATTGTGACCTATCTCTGCACTGATCACCCAAGTGATGTAACACTTGAGACTATGCTCTGCCTATTGGGGCATAGTGACATATCACTGCATTGATCACTCCAGATGTTGTAGCTCTTGCCTAGGCTCTGCCTACATGGGCATTGCTGACACATCTCTGAACTGGATCAACCAA TR:VR 319:3 212:1 chr18 31508984 r_102_0 G [chr8:78514499[A . PASS SVTYPE=BND;MATEID=r_102_1 TR:VR 108:16 38:0 chr8 78514499 r_102_1 A [chr18:31508984[A . PASS SVTYPE=BND;MATEID=r_102_0 TR:VR 108:16 38:0 chr8 1400947 d_1146 T . PASS END=1401005;SVTYPE=INS;SVINSLEN=104;SVINSSEQ=CCCTCCTCGTTCTCCTGAGTCGTGTATTGAGTGCTTACTGAGCGCCACCTCCTCATCCTCCGGAGTCGTGTATTGAGTGCTTACTGAGCGCCACCTCCTCATCC TR:VR 24:4 6:0 chr8 43967355 i_1002 T . Too_low_VAF END=43967355;SVTYPE=INS;SVINSLEN=339;SVINSSEQ=TTGTGGTGTCTGCATTCAAGTCACAGAATTGAACATCCCTTCACATAGAGCAGTTGTGCAGCACTCTATTTGTAGAATCTCGAAGTGGACATTTGGAGGGCTTTGTAGCCTATCTGGAAAAAGGAAATATCTTCCCATGAAAGCTAGATAGAAGTAATCTCAGAAACATGTTTATGCTGTATCTACTCAACTAACTGTGCTGAACATTTCTATTGATAGAGCAGTTTTGAGACACTCTTCTTTTGGAATCTGCAAGTGGATATTTGGCTAGATTTGAGGATTTCGTTGGAAACGGGATTATATATAAAAAGTAGACAGCAGCATTCTCAGAAACTTCAT TR:VR 250:3 92:1 chr14_GL000225v1_random 125456 d_466 T . Too_low_VAF END=128225;SVTYPE=DEL;SVLEN=-2769;SVINSLEN=19;SVINSSEQ=TGTCTAGGCTCAGCCCTAC TR:VR 757:7 708:1 chr2 89790123 d_654 T . Too_low_VAF END=89790278;SVTYPE=DEL;SVLEN=-155;SVINSLEN=86;SVINSSEQ=CAAATCAATTCCGTTTGATGATGATTCCATTCAATTCCATTCAATGAAAATTCCATTCTCGTCCATTTGATTACTCCATTCATTTG TR:VR 98:4 49:1 chr2 90388428 i_461 T . Too_low_VAF END=90388428;SVTYPE=INS;SVINSLEN=808;SVINSSEQ=GGACACGAATGGAATCATCATCGAATGGAATCAAATGGAGTCATCAAATGGATCGAATGGAATCATCATCAAATAGGATCATCAATAAAATGGAATCGAATGGAGTCATCGAATGGACACGAATGAATGAACAGAATGGACTCGAATGGAAACATCAAATAGAATCGAATGGAATCATCGAAAGGAATTGAATGGAATGATTGAATGGACACGAATGGAATCATCTAATGGACACGAATGGAATAATCATAAAATGGAATCGAATGGAATCATCAAATGGACTCGAATGAATGGAATCATTGAATGGACTCGAATGGAATCATCGAATGGACTCAAATGGAATCATCATCAAATGGAATCGAATGGAATCATCGAATGGACTTGAATGGAATCACTATCAAATGGAACCGAATGGAATCATCATGGAATGGAACCGAAGGAGTCATCATCAAATGGAATCCAATGCAATCATCATCGAATGGAATCGAATGGAATCATCATCAACTGGAATTGAACGGAATCATCGAACGGAATCCAGTGGAATCATCGGAGAATGGAATCATGGAATTATCAAATGGACTCGAATGGAATCAAACTTTGAATGGAATCGAAGGGAATCATCAAATGGAATCGAATGCAATCATCGAATGGAATCGAATCATCACTGAATGGAATCCAAAGGAATCACCATTGAATGGACTCGAATGGAATCATCATTGAATGGAATCGTGTGGAATCATCGAATGGACTCGAATGGAATCATCATCGATTGGAATTCAAATGGATCATCATCGAATGGAATCACAAG TR:VR 616:6 431:0 chr8 43976604 i_1003 T . Too_low_VAF END=43976605;SVTYPE=INS;SVINSLEN=340;SVINSSEQ=GGAATCTGCAAGTGGATATTTGGATAGATTTGAGGATTTCGTTGGAAACGGGATTATATATAAAAAGTAGACAGCAGCATTCTCAGAAACTTCTTTGTGGTGTCTGCATTCAAGTCACAGAATTGAACATCCCTTCACATAGAGCAGTTGTGCAGCACTCTATTTGTAGAATCTCGAAGTGGACATTTGGAGGGCTTTGTAGCCTATCTGGAAAAAGGAAATATCTTCCCATGAAAGCGAGATAGAAGTAATCTCAGAAACATGTTTATGCTGTATCTACTCAACTAACTGTGCTGAACATTTCTATTGATAGAGCAGTTTTGAGACACTCTTCTTTGGG TR:VR 323:3 93:1 chrX 82092476 d_1300 T . PASS END=82092539;SVTYPE=DEL;SVLEN=-63 TR:VR 26:4 20:0 chr17 1041969 r_83_0 C C]chrX:80408685] . PASS SVTYPE=BND;MATEID=r_83_1 TR:VR 66:6 41:0 chrX 80408685 r_83_1 A A]chr17:1041969] . PASS SVTYPE=BND;MATEID=r_83_0 TR:VR 66:6 41:0 chr17 7687096 r_85 G . PASS END=7698142;SVTYPE=DEL;SVLEN=-11046 TR:VR 36:23 25:0 chr2 183035633 d_762 T . PASS END=183035749;SVTYPE=DEL;SVLEN=-116 TR:VR 20:7 20:0 chr2 89821004 i_434 A . Too_low_VAF END=89821004;SVTYPE=INS;SVINSLEN=947;SVINSSEQ=AATCAATTCTCATCTCATACTGTTCCTTTCTAGTCCTACTTCATTCCATTCAATTCCATTGCATTTGAGTTTCTTCCATTCAATTTTATTTCACTCTATGTTGATTCCATTCAATTCCTTTCATTCCATTGGAGTCCATTCCATTCAATTCCATTCCAGTATATTCCATTCCATACCATTCGCGTCCATTCAATTCCATTCCATTAGAGTCCATTCCTTTCTATTCCATTCTGGTCAATTGCATTCCATTCCATTCGAATCTATTCCACTCCATTACATTCGAGTCCATTCCTTTATATTCCACTCCAAATCCATTGCATTCCTTTCGACTCCATTCCATTCCACTTTATTCGAGTCCATTCCATTCCTTTCCATTCTATGTCATTCAAGTCCATTCCTTTCCATTCAACATGAGTCCATTTCATTCCATTCCGTTTGACCCCATTCCATTCCATTCCATTAAATTCAGTCTATTCCATTCCATTCGAGTCCTTTCCATTCCATTCCATTCCATTCCATTCGAGTCCTTTCCATTCCCTTCGATTCTCTTCCATTCAAGTCCAATCCATTCCATTCCATTCCAATCCATTCCTTTCCATTCAATTCCATTCCATTCAATTCCATTCCATTCCAATTCATTCCATTCCATTCCATTTAATTCCATTCCATTCAATTCGAGTCCATTCCATTCCTTTCTGTTCCATTTGATTCTTGTCCATTCTATTCCTTTCCATTCAAGACTATTCCATTCCATTCCATCCATTTGAGTCCATTCCATTGCATTCTATTCCATTCCATTCCATTCCATTCCATTCTTTTCCATTCCATTCCATTCCATTCTATCCCATTCTATTTGAGTGCTTGGATTTCCCTTCTATTACATTCGATTCCATTCCCTTCCATTCCATTCCATTTGAGTCCATTGAATTACTTTCCATTTCATTACA TR:VR 183:3 137:0 chr20 62616960 i_605 C . PASS END=62617017;SVTYPE=INS;SVINSLEN=305;SVINSSEQ=CCGGCACGTTGCCTGGGGCTGGGCTTGGATCTCTTGGGGATCGTGGTGGGTAAGAGTGAGGAGGGGTCCCCATTCTGAAAAGGCATGAACAATGCTTTCACATTTGCCCCTTACCCCCAAGATTCCAGTTGGTCAGGGGAGTCCCCCTTCTCCTGCCCTCCTGGGTTAGGGGTCCTGGCCTTTGGTGGGTAGGGGGCAAAGTGATGAGTAGAATCTAAACATGCTGTCATGGTTTCAAATGGTGGTAAGGCTGTTCATTCACCTGGGTAACCAGTGCCCCCATCTTTCAGGGTCTGTGGGATTAG TR:VR 47:8 22:0 chr8 46619508 r_237 T . PASS END=46641629;SVTYPE=DEL;SVLEN=-22121 TR:VR 58:7 43:0 chr10 117742301 r_24_0 T T[chr8:69664028[ . PASS SVTYPE=BND;MATEID=r_24_1 TR:VR 115:6 39:0 chr8 69664028 r_24_1 T ]chr10:117742301]T . PASS SVTYPE=BND;MATEID=r_24_0 TR:VR 115:6 39:0 chr2 188987586 i_533 A . PASS END=188987586;SVTYPE=INS;SVINSLEN=142;SVINSSEQ=TAAATCTCTATGTCAATTAACTCTGTGATAGATATATCAACATAATTATGGGACTTTTGGGTTGATTTACATTATTATTTTAGATACTTGATTATAGGATTTTTAGCAGTGCCAATAAATGTTTTTCTGCACTGAGTTTGGT TR:VR 31:6 26:0 chr8 49239532 r_238 T . PASS END=74704173;SVTYPE=DUP;SVLEN=25464641 TR:VR 116:27 40:0 chr14_GL000225v1_random 94481 d_420 A . Too_low_VAF END=94790;SVTYPE=DEL;SVLEN=-309;SVINSLEN=40;SVINSSEQ=CTCTTGTCTAGGCTCTGCCTACAGGTGAATATTGTGACAT TR:VR 648:3 634:0 chr2 90388504 i_464 G . Too_low_VAF END=90388504;SVTYPE=INS;SVINSLEN=388;SVINSSEQ=GAATCAAGCGGAAGGAATCATCAAATGGAATCAAATGGAATCATTGTTGAATGGAATGGAATGGAATGGAATCATTGAATGGAATTGAATGGGATCACCAATGAACGGAATCAAATGGAATCATCTTCTAATGGAATCGAAAGGAATCATCAAATACACTCGAATGGAATCATCATCGAATGGAATCGTGTGGAATCGTCGAATGAACTGGAAATGAATCATAATCAAATGCAATTCGAATGAATCATCATCGAATGGAATCACATGGAATCATCATCGAATGGAATCATACGGAAACATCACAGAATGGAATTGAATGGAATCATCAGTTGGACTCGAATGGAATCATCAAATGTACTCGAAGGGACGCGTCAAATGGACTCGAACG TR:VR 601:4 435:1 chr22 12189934 r_145_0 G ]chrUn_KI270743v1:163637]TATCACCTACAAACTCAGCAGTTTCACTGAGTTACCTCCCTGTCTCTCTCATGTCTTCACCCCCAGCCCCCTGGGACTCTCCTGTCTGTCCCAGCTACTCCCCCACCACGCCCAGATTTCAGAGGGAG . Too_low_VAF SVTYPE=BND;MATEID=r_145_1;SVINSLEN=127;SVINSSEQ=TATCACCTACAAACTCAGCAGTTTCACTGAGTTACCTCCCTGTCTCTCTCATGTCTTCACCCCCAGCCCCCTGGGACTCTCCTGTCTGTCCCAGCTACTCCCCCACCACGCCCAGATTTCAGAGGGA TR:VR 143:3 83:1 chrUn_KI270743v1 163637 r_145_1 G GTCCCTCTGAAATCTGGGCGTGGTGGGGGAGTAGCTGGGACAGACAGGAGAGTCCCAGGGGGCTGGGGGTGAAGACATGAGAGAGACAGGGAGGTAACTCAGTGAAACTGCTGAGTTTGTAGGTGATA[chr22:12189934[ . Too_low_VAF SVTYPE=BND;MATEID=r_145_0;SVINSLEN=127;SVINSSEQ=TCCCTCTGAAATCTGGGCGTGGTGGGGGAGTAGCTGGGACAGACAGGAGAGTCCCAGGGGGCTGGGGGTGAAGACATGAGAGAGACAGGGAGGTAACTCAGTGAAACTGCTGAGTTTGTAGGTGATA TR:VR 143:3 83:1 chr8 55251073 d_1160 G . PASS END=55251977;SVTYPE=DEL;SVLEN=-904 TR:VR 53:6 16:0 chr10 120450379 r_25 A . PASS END=120483443;SVTYPE=DEL;SVLEN=-33064 TR:VR 51:20 31:0 chr22 12215786 d_897 T . PASS END=12216088;SVTYPE=DEL;SVLEN=-302 TR:VR 23:3 16:0 chr22 12504489 r_146_0 A A]chrUn_KI270749v1:82481] . Too_low_VAF SVTYPE=BND;MATEID=r_146_1 TR:VR 132:4 130:0 chrUn_KI270749v1 82481 r_146_1 G G]chr22:12504489] . Too_low_VAF SVTYPE=BND;MATEID=r_146_0 TR:VR 132:4 130:0 chr4 142387487 i_771 A . PASS END=142387506;SVTYPE=INS;SVINSLEN=194;SVINSSEQ=TTAGGGCTCCCAAATTAGTCTCATCTAGGGATGCCAGCTGATATGCAGAAGGTTCTAAAAAAGATGCCAATATTTTTATTTAAAACACATACTTTGCTCTGGCTGGAATGGAAAATATTAGAATTTAGGTACTCCCATGCAGCTGGTGGGGTGGCAACTTGCAAAACTGAGACGATTTTGCCTGTGGTTCCATG TR:VR 25:3 21:0 chr5 55373769 r_187_0 G [chr5:55376185[T . PASS SVTYPE=BND;MATEID=r_187_1 TR:VR 38:7 21:0 chr5 55376185 r_187_1 T [chr5:55373769[T . PASS SVTYPE=BND;MATEID=r_187_0 TR:VR 38:7 21:0 chrX 92023960 r_276 A . PASS END=92197261;SVTYPE=DEL;SVLEN=-173301;SVINSLEN=5;SVINSSEQ=GGAGT TR:VR 52:13 39:0 chr12 37966086 r_43_0 G [chr8:79529101[C . PASS SVTYPE=BND;MATEID=r_43_1 TR:VR 130:10 56:0 chr8 79529101 r_43_1 C [chr12:37966086[C . PASS SVTYPE=BND;MATEID=r_43_0 TR:VR 130:10 56:0 chr4 47994613 d_977 C . Too_small_size END=47994652;SVTYPE=DEL;SVLEN=-39 TR:VR 49:12 27:0 chr5 55760592 r_188_0 G ]chr8:65772440]G . PASS SVTYPE=BND;MATEID=r_188_1 TR:VR 133:21 38:0 chr8 65772440 r_188_1 G G[chr5:55760592[ . PASS SVTYPE=BND;MATEID=r_188_0 TR:VR 133:21 38:0 chr7 16445536 r_221 A . PASS END=18496020;SVTYPE=DUP;SVLEN=2050484 TR:VR 101:13 46:0 chr8 57653308 r_240 C . Too_low_VAF END=63796007;SVTYPE=DUP;SVLEN=6142699 TR:VR 94:3 41:0 chr12 39190858 r_44_0 T T]chr8:84602082] . PASS SVTYPE=BND;MATEID=r_44_1 TR:VR 106:17 34:0 chr8 84602082 r_44_1 T T]chr12:39190858] . PASS SVTYPE=BND;MATEID=r_44_0 TR:VR 106:17 34:0 chr16 34765280 d_500 T . PASS END=34765299;SVTYPE=INS;SVINSLEN=65;SVINSSEQ=CAGGGATTCCAATCAATTTCATTCGATGATGATTCCTTTTGAATCCATTCGATGATTCCATTCAA TR:VR 33:4 25:0 chr18 50343942 r_104_0 T [chr2:149662436[TTTTTTTTTTTTTTTTTTTTTTTTG . PASS SVTYPE=BND;MATEID=r_104_1;SVINSLEN=24;SVINSSEQ=TTTTTTTTTTTTTTTTTTTTTTTT TR:VR 69:5 42:0 chr2 149662436 r_104_1 G [chr18:50343942[AAAAAAAAAAAAAAAAAAAAAAAAG . PASS SVTYPE=BND;MATEID=r_104_0;SVINSLEN=24;SVINSSEQ=AAAAAAAAAAAAAAAAAAAAAAAA TR:VR 69:5 42:0 chr2 219382502 d_764 T . Too_small_size END=219382546;SVTYPE=DEL;SVLEN=-44 TR:VR 26:9 19:0 chr5 55836729 r_189_0 A ]chr8:71251432]A . PASS SVTYPE=BND;MATEID=r_189_1 TR:VR 138:7 43:0 chr8 71251432 r_189_1 A A[chr5:55836729[ . PASS SVTYPE=BND;MATEID=r_189_0 TR:VR 138:7 43:0 chr7 62238196 r_225_0 C [chr8:39322167[T . Too_low_VAF SVTYPE=BND;MATEID=r_225_1 TR:VR 202:3 60:0 chr8 39322167 r_225_1 T [chr7:62238196[T . Too_low_VAF SVTYPE=BND;MATEID=r_225_0 TR:VR 202:3 60:0 chr8 57963246 d_1162 G . Too_low_VAF END=57980109;SVTYPE=DEL;SVLEN=-16863 TR:VR 86:4 24:0 chr12 39231584 r_45_0 A ]chr7:1516926]C . PASS SVTYPE=BND;MATEID=r_45_1 TR:VR 107:11 42:0 chr7 1516926 r_45_1 C C[chr12:39231584[ . PASS SVTYPE=BND;MATEID=r_45_0 TR:VR 107:11 42:0 chr16 36106416 r_76_0 C [chr17:33473266[A . PASS SVTYPE=BND;MATEID=r_76_1 TR:VR 80:5 41:0 chr17 33473266 r_76_1 A [chr16:36106416[A . PASS SVTYPE=BND;MATEID=r_76_0 TR:VR 80:5 41:0 chr18 50344835 r_105 G . PASS END=50346886;SVTYPE=DEL;SVLEN=-2051 TR:VR 39:5 29:0 chr2 90289035 d_659 G . PASS END=90289309;SVTYPE=DEL;SVLEN=-274;SVINSLEN=106;SVINSSEQ=TAAGCCAATCCACTCACCCACTCGAAGCCAGCCAGTCACCCGACCGGCCAAGCCAGCCAAGCAAAGCCCAGCCAACCCAGACAGCCTGACGCCAGCCAGCCCAGAC TR:VR 96:11 49:1 chr21 7243467 i_621 G . Too_low_VAF END=7243467;SVTYPE=INS;SVINSLEN=1045;SVINSSEQ=TTAAAATTTTCTCTTGATTGAGGAGTTTTGAAACTTTCTTTTTGTAGTATCTGCAAGTGGTCATTTGGAGCAGCTTTGAGGACTATGGTGGAAAAGGAAATATCTTCACATAAAAACTAGACAGAAGAATTCTGAGAAACTTCTTTGTGATGAGTGAGTTCATCTCACAGAGTTGAACTTTTCTTTGATTGAGCAGTTTGGAAACACTCTTTTTGTACAATCTGCAGGTGGATATTTGGAGCGCTATGCTGCCTATGGTAGAAAACGAAATATCTTCACATAAAATCTAGACAGAAGCAATCTGAGAAACTTCCGTTTGATGTGTCCGTTAATCTCACAGAGTGTAAATCTTTCTTTTGATTGAGCAGTTTTGAAACTCTCTTTTTGTAGAATCTGCAAGTGGACATTTGGAGCGCTTTTAGAACTATGGTGGAAAAGGAAATATCTTCACATAAAAACGAGACAGAAGAATTCTGAGAAACTTCATTGTGATGTGTGTGCATTCATCTCACAGAGTTGAACCTTTCTTTTGAGTTGAGCAGTTTTGAAATGGTGTTTTTTTAGAATCTGCAAGTCAGCATTTAGATAGCTTTGAGGACCATAGTGGAAAAGGAAATATCTTCACATAAAATACTAGACAGAAGAATTCCGGGTGACATCTGGCTCACGCCTGAACTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGAGTCACGAGAATCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAGGAATTAGCCAGGCATAGGTGGTGGGCGCCTGTAGTCCCAGAAACTACTCAGTGATGGCTGCAGGCAGGAGAATGGCGTGAACCCAGGGGGCGGAGCCTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAATAAAAAATAAAAAATAAAAAAAAAATACACAGAAGCAATATCACAGAAACTTCTTTTTGATGTGTGCATTCATCTCACAAAGTAAT TR:VR 157:4 70:0 chr5 110459142 r_193_0 T [chr5:120504386[T . PASS SVTYPE=BND;MATEID=r_193_1 TR:VR 43:5 43:0 chr5 120504386 r_193_1 T [chr5:110459142[T . PASS SVTYPE=BND;MATEID=r_193_0 TR:VR 43:5 43:0 chr8 64232472 i_1004 A . PASS END=64232475;SVTYPE=INS;SVINSLEN=48;SVINSSEQ=ACGAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG TR:VR 62:8 14:0 chr9 90874873 d_1186 C . PASS END=90874949;SVTYPE=DEL;SVLEN=-76 TR:VR 27:11 14:0 chr11 50772880 r_33_0 T TCACAAAGAAGTTTCCCAGATTGCTTCTGCCTAGATTTTATATGAAGATATTTCCTTTTCTACCATTTGCCACAAATCGCTCCAAATTTCCACTTGCAGATTCTACAAAGAGTCTTTCCAAAGTGCTC[chr8:43849560[ . Too_low_VAF SVTYPE=BND;MATEID=r_33_1;SVINSLEN=127;SVINSSEQ=CACAAAGAAGTTTCCCAGATTGCTTCTGCCTAGATTTTATATGAAGATATTTCCTTTTCTACCATTTGCCACAAATCGCTCCAAATTTCCACTTGCAGATTCTACAAAGAGTCTTTCCAAAGTGCTC TR:VR 109:3 75:0 chr8 43849560 r_33_1 A ]chr11:50772880]GAGCACTTTGGAAAGACTCTTTGTAGAATCTGCAAGTGGAAATTTGGAGCGATTTGTGGCAAATGGTAGAAAAGGAAATATCTTCATATAAAATCTAGGCAGAAGCAATCTGGGAAACTTCTTTGTGA . Too_low_VAF SVTYPE=BND;MATEID=r_33_0;SVINSLEN=127;SVINSSEQ=GAGCACTTTGGAAAGACTCTTTGTAGAATCTGCAAGTGGAAATTTGGAGCGATTTGTGGCAAATGGTAGAAAAGGAAATATCTTCATATAAAATCTAGGCAGAAGCAATCTGGGAAACTTCTTTGTG TR:VR 109:3 75:0 chr12 39233970 r_46_0 C C]chr8:78589611] . PASS SVTYPE=BND;MATEID=r_46_1 TR:VR 103:13 46:0 chr8 78589611 r_46_1 A A]chr12:39233970] . PASS SVTYPE=BND;MATEID=r_46_0 TR:VR 103:13 46:0 chr14 38261434 i_194 G . PASS END=38261444;SVTYPE=INS;SVINSLEN=168;SVINSSEQ=CTGAGATGCAAAAATCTATACACAAGATCAATGAAACCAAGTATTGGTTCTTCAAAAGAATAAATAAGACAGACCACCCTAGCTATATTAACAAAGAAAAAAAGGAGATCCAAATAAGTCCAATGAGAAATGACAATGATGATATTATAACTAATCCTACAGAAATCA TR:VR 37:4 22:0 chr14_GL000225v1_random 96497 d_426 A . Too_low_VAF END=96529;SVTYPE=DEL;SVLEN=-32;SVINSLEN=30;SVINSSEQ=TATCTCTGCACTGATCACCCAGGTGATGTA TR:VR 639:6 642:0 chr17 15051706 r_86_0 T [chr17:15053268[G . PASS SVTYPE=BND;MATEID=r_86_1 TR:VR 56:4 23:0 chr17 15053268 r_86_1 G [chr17:15051706[G . PASS SVTYPE=BND;MATEID=r_86_0 TR:VR 56:4 23:0 chr18 50349982 r_106_0 C C]chr2:149662450] . PASS SVTYPE=BND;MATEID=r_106_1 TR:VR 68:5 44:0 chr2 149662450 r_106_1 A A]chr18:50349982] . PASS SVTYPE=BND;MATEID=r_106_0 TR:VR 68:5 44:0 chr2 90388732 i_468 T . Too_low_VAF END=90388733;SVTYPE=INS;SVINSLEN=1300;SVINSSEQ=GGAATTGAATGGAATCATCATCAAATGGAATCGAATGGAATCATCATCAAATGGAATCGAATGGAATCATCATCGAATGGAATCGAATGGAATCATCATCAAATGGAATCGAATGAAATCATCTGAATGGACTCTAATGGAAATCATCGAATGGACTCGAATGGAATCATCGAATGGAATCGAATGGAATCATCATCGAATGGAATCGAATGGAAATCATCAAATGGAATCTACATGAATCATCATCGAATGGAATCGAATGGAATCATCGAATGGAATCGAATAGAATCATCATCGAATGGAAATCGAATGGAATCATCATCGAATGGACTCGAATGGAATCATCATCAAATGCAATTGAATGGAATCATCATGAAATGGAATCGAATGGAATCATCATTGAATGGAATCGAATGGAATCATCATCGAGAATGGAATCAAATGGAATCATCAAATGGAATCGAATGGAATCATCGATTGGACTCGAATGGAATGATCGAATGGAATTGAAGTGGAATCATCATGAATGGAATCTAATGGAATCATTGAATGGAATCGAATGGAATCATCGTTAAATGGAATCGAATGGAATAAATCATCAAATGGAATCGAATGGAATCATCATCGAATGGATTCGAAACGGAATCAATCGAATGGAAGACACCAAATGGAATCGACATCTACGAATGGACTCGAAAGGAATCAGTTATCGAATGGAATTGAATGGAATCATCATCGAATGGAATCGAATGGAATCATCGAATGGACTCAAATGGAATCATCATCGAATGGAAATCAAATGGAATCATCGAATGGAACCGGAATGGAATCATCATCAAATGGAGCTGAATGAGAATCATTGAATGGAATCGAATGGAATCATCATTGAATGGAATTGAATGGAATCATCGAATGGATACTCGAATGGAATCATCCAATTGAATGGAATCAAATGGAATAATTGAATGGACTCGAATGGAATCATCATTGAATGGAATCGAAGGAATCATCATCGAATGGAATCGAATGGAATCATCATTGAATGGACTCGAATGGAATCATCATTGAATGGAATCAAATGGAATCATCAATGAATGGACTCGAATGGAATCATCATCGAATGGAATCGAATGGAATCATCAAGAATGGACTCGAATGGAATCATCATCGAATGGAATCAAATGGAATCATCAAATGGACTCGAAAGGAATCATCATCAAATGGAATCGAATGGAATCATCATCGAATGGAATCGAATGGAATCATCATCGAATGGAATCGAATAGAAATCATCAAATGG TR:VR 605:3 422:1 chr3 195727076 r_164 G . PASS END=195746134;SVTYPE=DEL;SVLEN=-19058 TR:VR 101:6 61:1 chr5 110563445 r_194_0 T T]chr5:120504167] . PASS SVTYPE=BND;MATEID=r_194_1 TR:VR 63:12 42:0 chr5 120504167 r_194_1 C C]chr5:110563445] . PASS SVTYPE=BND;MATEID=r_194_0 TR:VR 63:12 42:0 chr8 65769671 r_241_0 A [chr8:65775714[G . PASS SVTYPE=BND;MATEID=r_241_1 TR:VR 96:19 20:0 chr8 65775714 r_241_1 G [chr8:65769671[G . PASS SVTYPE=BND;MATEID=r_241_0 TR:VR 96:19 20:0 chr1 143239773 d_141 G . Too_low_VAF END=143239941;SVTYPE=INS;SVINSLEN=173;SVINSSEQ=AATGGAATGGAATAATCCATGGACTCGAATGCAATCATCATCGAATGGAATCGAATGGAATCATCGAATGGACTCGAATGGAATAATGAAATTGAACGGAATCGAATGGAATCATCATCGGATGGAAACGAATGGAATCATCATCGAATGGAAATGAGAAGAGAATCATCATC TR:VR 940:3 931:0 chr14_GL000225v1_random 22291 d_314 C . Too_low_VAF END=22439;SVTYPE=DEL;SVLEN=-148;SVINSLEN=13;SVINSSEQ=ACAATGTGCCCTG TR:VR 224:3 201:0 chr17 15063763 r_87_0 T T]chr3:87979537] . Too_low_VAF SVTYPE=BND;MATEID=r_87_1 TR:VR 85:3 40:0 chr3 87979537 r_87_1 T T]chr17:15063763] . Too_low_VAF SVTYPE=BND;MATEID=r_87_0 TR:VR 85:3 40:0 chr2 91508442 d_741 C . PASS END=91509049;SVTYPE=DEL;SVLEN=-607;SVINSLEN=65;SVINSSEQ=ATTGGCATGGCATTGGGTGGCTTGGCTGGCTTGGCGGGCTTGACAGGTCTTGGCTGGCATTGGCT TR:VR 134:7 116:1 chr3 195746512 r_165 T . PASS END=195749161;SVTYPE=DEL;SVLEN=-2649;SVINSLEN=29;SVINSSEQ=TAATTATAATTATTAAATAATTAAATAAT TR:VR 63:6 38:1 chr5 57619110 r_190_0 C [chr5:60876399[A . PASS SVTYPE=BND;MATEID=r_190_1 TR:VR 218:35 36:0 chr5 60876399 r_190_1 A [chr5:57619110[A . PASS SVTYPE=BND;MATEID=r_190_0 TR:VR 218:35 36:0 chr14 56474042 d_297 C . PASS END=56474286;SVTYPE=DEL;SVLEN=-244 TR:VR 35:7 17:0 chr2 90388935 d_701 A . Too_low_VAF END=90389238;SVTYPE=DEL;SVLEN=-303;SVINSLEN=71;SVINSSEQ=CATGGAATCATCAAATGGACTCGAATGGAATAATCATAGAAAGGAATTGAAAGGAATCATCGAATGAAACC TR:VR 611:4 425:1 chr7 62882984 i_935 C . PASS END=62882984;SVTYPE=INS;SVINSLEN=172;SVINSSEQ=AGGGTATTCAGTGGTTTGCAAACACTGTTTTTGTCCATTCTGTGAATGGATATTTGGGAGCTCTTTCACGTCAGTGGTGAAAAAGGATATATCCCAGGATAAAAACTAGAAAGAGGCTATTTGAGAAACTGCTTTCATTGTGTGAATTCACCTCACAGAGTTAAACTTTTTT TR:VR 21:3 25:0 chr16 4344792 i_272 G . PASS END=4344792;SVTYPE=INS;SVINSLEN=346;SVINSSEQ=GGGGGGTTCTGTGAGAGGAGGGGGTTCCGTGAGAGGAGGGGATTGTGTGAGAGGAGGGGGTTCCGTGAGAGGAGGGGGTTGTGTGAGAGGAGGGGGTTCTGTGAGAGGAGGGGATTGTGTGAGAGGAGGGGGTTGTGTGAGAGGAGGGGGTTCTGTGAGAGGAGGGGGACTGTGTGAGAGGAGGGTTCCGTGAGAGGAGGGGGTTCTGTGAGAGGAGGGGACTCTGTGAGAGGAGGGGGTTCTGTGAGAGGAGGGGGTTTGTGAGAGGGGAGGGGGTTCTGTGAGAGGAGGGGGTTCCGTGAGAGGAGGGGGTTGTGTGAGAGGAGGGGGTTCTGTGAGAGAGGAG TR:VR 32:7 26:0 chr2 224564156 d_769 C . Too_small_size END=224564192;SVTYPE=DEL;SVLEN=-36;SVINSLEN=1;SVINSSEQ=T TR:VR 23:8 18:0 chr21 7299190 r_136_0 T T[chr8:48828951[ . Too_low_VAF SVTYPE=BND;MATEID=r_136_1 TR:VR 177:4 118:0 chr8 48828951 r_136_1 T ]chr21:7299190]T . Too_low_VAF SVTYPE=BND;MATEID=r_136_0 TR:VR 177:4 118:0 chr5 58598205 i_826 A . Too_low_VAF END=58598206;SVTYPE=INS;SVINSLEN=102;SVINSSEQ=TGATAACATGTAATACATTATATATAAGTATATGATAACATGTAATACATTATATATATAATTATATATGATAACATATATTACATTATATATAAGTATATG TR:VR 108:3 21:0 chrUn_GL000216v2 115216 r_260 T . Too_low_VAF END=129353;SVTYPE=DUP;SVLEN=14137 TR:VR 194:6 137:0 chr5 58601030 r_191_0 T [chr7:836148[T . Too_low_VAF SVTYPE=BND;MATEID=r_191_1 TR:VR 182:5 53:0 chr7 836148 r_191_1 T [chr5:58601030[T . Too_low_VAF SVTYPE=BND;MATEID=r_191_0 TR:VR 182:5 53:0 chr7 6593147 d_1092 A . PASS END=6593840;SVTYPE=DEL;SVLEN=-693 TR:VR 106:14 28:0 chr6 64538661 r_202_0 T T[chrUn_KI270442v1:378834[ . Too_low_VAF SVTYPE=BND;MATEID=r_202_1 TR:VR 222:11 142:0 chrUn_KI270442v1 378834 r_202_1 A ]chr6:64538661]A . Too_low_VAF SVTYPE=BND;MATEID=r_202_0 TR:VR 222:11 142:0 chr7 27987607 i_915 G . Too_small_size END=27987607;SVTYPE=INS;SVINSLEN=41;SVINSSEQ=TGGGGGACAGCCCCCACCCGGCCGGCCGCTGCCCCGTCCAG TR:VR 32:4 17:0 chr7 6594563 r_214 C . PASS END=14907280;SVTYPE=DEL;SVLEN=-8312717 TR:VR 131:14 46:0 chr8 67300324 d_1163 G . PASS END=67302325;SVTYPE=DEL;SVLEN=-2001 TR:VR 71:6 27:0 chr11 62523681 d_258 A . PASS END=62523760;SVTYPE=DEL;SVLEN=-79 TR:VR 46:14 30:0 chr14 74995120 d_300 T . PASS END=74995359;SVTYPE=DEL;SVLEN=-239;SVINSLEN=79;SVINSSEQ=CTGTATCTAGCTCAAGGTTTGTAAACACACCAATCAGCACCCTGTGTTTAGCTCAAGGTTTGTGAGTGCACCAATCGAC TR:VR 38:4 26:0 chr14_GL000225v1_random 28830 d_317 A . Too_low_VAF END=29004;SVTYPE=DEL;SVLEN=-174;SVINSLEN=39;SVINSSEQ=CCCAAATGATGCAAATCTTCTCTAGGCTCCGCAGGGAGT TR:VR 210:3 138:1 chr14_GL000225v1_random 99493 d_432 G . Too_low_VAF END=101307;SVTYPE=DEL;SVLEN=-1814;SVINSLEN=14;SVINSSEQ=GGACATTGTGACAT TR:VR 673:3 678:0 chr2 227481859 r_125 A . PASS END=227545235;SVTYPE=DEL;SVLEN=-63376 TR:VR 43:11 51:0 chr4 143578880 r_179_0 T TTTTTTTTTTTTTTTTTTTTTT]chrX:11713316] . Too_low_VAF SVTYPE=BND;MATEID=r_179_1;SVINSLEN=21;SVINSSEQ=TTTTTTTTTTTTTTTTTTTTT TR:VR 71:3 52:1 chrX 11713316 r_179_1 A AAAAAAAAAAAAAAAAAAAAAA]chr4:143578880] . Too_low_VAF SVTYPE=BND;MATEID=r_179_0;SVINSLEN=21;SVINSSEQ=AAAAAAAAAAAAAAAAAAAAA TR:VR 71:3 52:1 chr8 144126058 i_1020 C . PASS END=144126059;SVTYPE=INS;SVINSLEN=121;SVINSSEQ=GCGGAGGGAGGAATATTGTACCGGACAGCCCGCGGTGGAGGAATATTGTACCGGACCGCCCGCGGTGGAGGAATTAGCACCGGACCGCTCCCGCGGCGGGGAATTGTACCGGACAGCCCGC TR:VR 50:5 15:0 chr14 76187623 r_59_0 G [chr8:12560068[CACACACACACACACT . Too_low_VAF SVTYPE=BND;MATEID=r_59_1;SVINSLEN=15;SVINSSEQ=CACACACACACACAC TR:VR 131:4 60:0 chr8 12560068 r_59_1 T [chr14:76187623[GTGTGTGTGTGTGTGT . Too_low_VAF SVTYPE=BND;MATEID=r_59_0;SVINSLEN=15;SVINSSEQ=GTGTGTGTGTGTGTG TR:VR 131:4 60:0 chr2 229693518 i_537 T . PASS END=229693518;SVTYPE=INS;SVINSLEN=55;SVINSSEQ=TCCTAGCAATTTGGAGGACTCAAAGACTGGAAGATGTTTGAAACTTTGAAACTGC TR:VR 37:3 23:0 chr6 66572898 r_203_0 G G]chr6:66834850] . PASS SVTYPE=BND;MATEID=r_203_1 TR:VR 62:6 47:0 chr6 66834850 r_203_1 A A]chr6:66572898] . PASS SVTYPE=BND;MATEID=r_203_0 TR:VR 62:6 47:0 chr7 661441 d_1071 A . PASS END=661420;SVTYPE=INS;SVINSLEN=182;SVINSSEQ=TACCTACTCTCCCCACCATGGCACAGGTCCCCACCCCAACGGGTCCAAATACCTACTCTCTCCCCCCCCATATGGCACAGTTCCCCACTACAACGGGTCCAAATACTTACTCTTCCCCTCCATGGCACAGGTCCCCACCCCCAACAGATCCAAATACCTACTCTCCCCCACATGGCACAGGT TR:VR 67:4 20:0 chr17 21399778 r_88_0 T ]chr20:30285566]G . Too_low_VAF SVTYPE=BND;MATEID=r_88_1 TR:VR 74:3 33:0 chr20 30285566 r_88_1 G G[chr17:21399778[ . Too_low_VAF SVTYPE=BND;MATEID=r_88_0 TR:VR 74:3 33:0 chr20 64088549 i_615 G . PASS END=64088563;SVTYPE=INS;SVINSLEN=349;SVINSSEQ=GAGGCCAGGATCTGTGCAGAGTGGCCAGGATCTGTGCAGAGTGGCCAGGATCTGTGCAGGGTGGCCAGGATCTGTGCAGAGTGGCCAGGATCTGTGCAGAGTGGCCAGGATCTGTGCAGAGTGGCCAGGATCTGTGCAGAGTGGCCAGGATCTGTGCAGAGTGGCCAGGATCTGTGCAGAGTGGCCAGGATCTGTGCAGAGTGGCCAGGATCTGTGCAGAGAGGCCAGGATCTGTGCAGAGTGGCCAGGATCTGTGCAGAGTGGCCAGGATCTGTGCAGAGTGGCCAGGATCTGTGCAGAGTGGCCAGGATCTGTGCAGGGAGGGCAGGATCTGTGCAGAGTGGCCAGG TR:VR 47:16 14:0 chr6 66670409 r_204 G . PASS END=66902857;SVTYPE=DUP;SVLEN=232448;SVINSLEN=3;SVINSSEQ=GCC TR:VR 48:4 55:0 chr12 69575251 d_274 C . Too_small_size END=69575289;SVTYPE=DEL;SVLEN=-38 TR:VR 23:8 22:0 chr17 21501969 r_89_0 A A[chr7:8985205[ . PASS SVTYPE=BND;MATEID=r_89_1 TR:VR 136:7 43:0 chr7 8985205 r_89_1 G ]chr17:21501969]G . PASS SVTYPE=BND;MATEID=r_89_0 TR:VR 136:7 43:0 chr22 44952058 d_903 A . PASS END=44958703;SVTYPE=DEL;SVLEN=-6645 TR:VR 64:10 32:0 chr4 1524566 i_736 C . PASS END=1524566;SVTYPE=INS;SVINSLEN=156;SVINSSEQ=AGCCTTTGTCCTAACAGAAGCACTGGGAGCACGTAGGAGGGGGCCGCGCCAGCCGTCCTCCTGGCTTCTCATCACTGGCATTGTTTCAGAAGACAGCCTTTGTCCTAACAGAAGCACTGGGAGCACGCTGAGGGGGCGCGCGTCCTAGCCGTCCTC TR:VR 48:3 24:0 chr5 60935542 r_192_0 T T]chr5:60937500] . PASS SVTYPE=BND;MATEID=r_192_1 TR:VR 95:10 26:0 chr5 60937500 r_192_1 C C]chr5:60935542] . PASS SVTYPE=BND;MATEID=r_192_0 TR:VR 95:10 26:0 chr6 66838803 r_205_0 A [chr6:66871773[G . PASS SVTYPE=BND;MATEID=r_205_1 TR:VR 60:6 53:0 chr6 66871773 r_205_1 G [chr6:66838803[G . PASS SVTYPE=BND;MATEID=r_205_0 TR:VR 60:6 53:0 chr2 234813765 i_540 C . PASS END=234813768;SVTYPE=INS;SVINSLEN=509;SVINSSEQ=ACATCAGCAAGTCCACAACATGTCAAAGCATCATAAAATACAGAAGCTAAATAAATGGCCAAAAAGGTAATATGTAACGAAAACATATGAAAGTTCTATGGATATAAATAGGGCACAGTGGATTCAGAATAAGAGAGAATAGGCAGTAGAGTGTGGCAGAATTCATCTCTGCGAGTACACGCTACTTATTATAAAGTGACACCTTCATGGGAGTAACAGAGCAAATGAATATGCAATGAGAAATATGCAATGAGAAATCATGAAAAATTCTGCCTACTTGAGAATAGCTGGCTGGGAACCAACCCTGCAAATCAACAAAAGGCTGGAAGGAACACATGCAAGTCAGAGCAAGGAAACAGAGGTTTTGTGTGGAGGTCATGTGGGTGCCTCCTTGGGTTCAAGTCCTGGCTTCTCTACTTACCTGTGTGGGACCCTGGGCACATTCCTTAACTTCTCTCTCAGTTTTCTCATTTGTAAAGTGGGGTTAACAGTATCATCTACCCCTTAGG TR:VR 28:4 14:0 chr4 152957 r_167_0 T [chr9:107775288[G . PASS SVTYPE=BND;MATEID=r_167_1 TR:VR 83:11 51:1 chr9 107775288 r_167_1 G [chr4:152957[G . PASS SVTYPE=BND;MATEID=r_167_0 TR:VR 83:11 51:1 chr6 66870678 r_206 G . PASS END=66872025;SVTYPE=DUP;SVLEN=1347 TR:VR 42:5 27:0 chr11 65501503 r_35 G . Too_low_VAF END=65522272;SVTYPE=DUP;SVLEN=20769 TR:VR 93:3 34:0 chr2 234814340 r_126 T . PASS END=234835446;SVTYPE=DEL;SVLEN=-21106 TR:VR 41:3 28:0 chr6 66902630 i_870 T . PASS END=66902630;SVTYPE=INS;SVINSLEN=108;SVINSSEQ=CAATAGAGAATGATTTATTGAGGAATTATAACAGTAAATAATAAAATGTTAGTTCTCAGATTGTTCTACATCCTTTTGGTCTGTGCTAGGTTCTGTTGAAAATTTTGC TR:VR 33:4 30:0 chr7 3954443 i_908 A . PASS END=3954443;SVTYPE=INS;SVINSLEN=155;SVINSSEQ=CCCTCCCCCTCCCACATCCCCTCTACACCCTCCACCCTCCCCTCCTGCCTCCCCTCTACACCCTCCCCTCCCCTCCTGCCTCCCCTCTACACCCTCCCCCTCCTGCCTCCCCTCTACACCCTCCCTTCCCTCCCCTCCTCCCTCCCCTCTACACC TR:VR 70:18 12:0 chr4 157100696 r_181_0 A [chr9:42788724[G . PASS SVTYPE=BND;MATEID=r_181_1 TR:VR 42:5 54:0 chr9 42788724 r_181_1 G [chr4:157100696[G . PASS SVTYPE=BND;MATEID=r_181_0 TR:VR 42:5 54:0 chr8 69391409 r_242_0 C [chr8:70564812[G . Too_low_VAF SVTYPE=BND;MATEID=r_242_1 TR:VR 184:9 35:0 chr8 70564812 r_242_1 G [chr8:69391409[G . Too_low_VAF SVTYPE=BND;MATEID=r_242_0 TR:VR 184:9 35:0 chr1 143502941 d_150 A . Too_small_size END=143502967;SVTYPE=DEL;SVLEN=-26 TR:VR 99:5 43:1 chr1 2660134 d_9 G . Too_low_VAF END=2663012;SVTYPE=DEL;SVLEN=-2878;SVINSLEN=188;SVINSSEQ=AGCAGCACCCACACACCCAGGTGAGCAACTGACAGCCTGGAGCAGCACCCACACACCCAGGTGATCATCTGACAGCCTGGAACAGCACGCTGTTCCCCAAGGTGAGCATCTGACAGCCTGGAACAGCACACACACCCCCAGGCAGGCATCTGACAACCTGGAACAGCACCCATACGCCCAGATGAGCA TR:VR 230:4 100:0 chr3 33752727 r_150 T . PASS END=33781564;SVTYPE=DEL;SVLEN=-28837 TR:VR 67:16 38:0