##fileformat=VCFv4.3
##fileDate=20230117
##source=nanomonsv-0.5.0
##reference=/projects/jfan_prj/jfan_prj/Nanopore_Testing/2021_nanopore_sv_testing/scratch/depth_testing/POG/COLO829/hg38_no_alt.fa
##contig=<ID=chr1,length=248956422>
##contig=<ID=chr2,length=242193529>
##contig=<ID=chr3,length=198295559>
##contig=<ID=chr4,length=190214555>
##contig=<ID=chr5,length=181538259>
##contig=<ID=chr6,length=170805979>
##contig=<ID=chr7,length=159345973>
##contig=<ID=chr8,length=145138636>
##contig=<ID=chr9,length=138394717>
##contig=<ID=chr10,length=133797422>
##contig=<ID=chr11,length=135086622>
##contig=<ID=chr12,length=133275309>
##contig=<ID=chr13,length=114364328>
##contig=<ID=chr14,length=107043718>
##contig=<ID=chr15,length=101991189>
##contig=<ID=chr16,length=90338345>
##contig=<ID=chr17,length=83257441>
##contig=<ID=chr18,length=80373285>
##contig=<ID=chr19,length=58617616>
##contig=<ID=chr20,length=64444167>
##contig=<ID=chr21,length=46709983>
##contig=<ID=chr22,length=50818468>
##contig=<ID=chrX,length=156040895>
##contig=<ID=chrY,length=57227415>
##contig=<ID=chrM,length=16569>
##contig=<ID=chr1_KI270706v1_random,length=175055>
##contig=<ID=chr1_KI270707v1_random,length=32032>
##contig=<ID=chr1_KI270708v1_random,length=127682>
##contig=<ID=chr1_KI270709v1_random,length=66860>
##contig=<ID=chr1_KI270710v1_random,length=40176>
##contig=<ID=chr1_KI270711v1_random,length=42210>
##contig=<ID=chr1_KI270712v1_random,length=176043>
##contig=<ID=chr1_KI270713v1_random,length=40745>
##contig=<ID=chr1_KI270714v1_random,length=41717>
##contig=<ID=chr2_KI270715v1_random,length=161471>
##contig=<ID=chr2_KI270716v1_random,length=153799>
##contig=<ID=chr3_GL000221v1_random,length=155397>
##contig=<ID=chr4_GL000008v2_random,length=209709>
##contig=<ID=chr5_GL000208v1_random,length=92689>
##contig=<ID=chr9_KI270717v1_random,length=40062>
##contig=<ID=chr9_KI270718v1_random,length=38054>
##contig=<ID=chr9_KI270719v1_random,length=176845>
##contig=<ID=chr9_KI270720v1_random,length=39050>
##contig=<ID=chr11_KI270721v1_random,length=100316>
##contig=<ID=chr14_GL000009v2_random,length=201709>
##contig=<ID=chr14_GL000225v1_random,length=211173>
##contig=<ID=chr14_KI270722v1_random,length=194050>
##contig=<ID=chr14_GL000194v1_random,length=191469>
##contig=<ID=chr14_KI270723v1_random,length=38115>
##contig=<ID=chr14_KI270724v1_random,length=39555>
##contig=<ID=chr14_KI270725v1_random,length=172810>
##contig=<ID=chr14_KI270726v1_random,length=43739>
##contig=<ID=chr15_KI270727v1_random,length=448248>
##contig=<ID=chr16_KI270728v1_random,length=1872759>
##contig=<ID=chr17_GL000205v2_random,length=185591>
##contig=<ID=chr17_KI270729v1_random,length=280839>
##contig=<ID=chr17_KI270730v1_random,length=112551>
##contig=<ID=chr22_KI270731v1_random,length=150754>
##contig=<ID=chr22_KI270732v1_random,length=41543>
##contig=<ID=chr22_KI270733v1_random,length=179772>
##contig=<ID=chr22_KI270734v1_random,length=165050>
##contig=<ID=chr22_KI270735v1_random,length=42811>
##contig=<ID=chr22_KI270736v1_random,length=181920>
##contig=<ID=chr22_KI270737v1_random,length=103838>
##contig=<ID=chr22_KI270738v1_random,length=99375>
##contig=<ID=chr22_KI270739v1_random,length=73985>
##contig=<ID=chrY_KI270740v1_random,length=37240>
##contig=<ID=chrUn_KI270302v1,length=2274>
##contig=<ID=chrUn_KI270304v1,length=2165>
##contig=<ID=chrUn_KI270303v1,length=1942>
##contig=<ID=chrUn_KI270305v1,length=1472>
##contig=<ID=chrUn_KI270322v1,length=21476>
##contig=<ID=chrUn_KI270320v1,length=4416>
##contig=<ID=chrUn_KI270310v1,length=1201>
##contig=<ID=chrUn_KI270316v1,length=1444>
##contig=<ID=chrUn_KI270315v1,length=2276>
##contig=<ID=chrUn_KI270312v1,length=998>
##contig=<ID=chrUn_KI270311v1,length=12399>
##contig=<ID=chrUn_KI270317v1,length=37690>
##contig=<ID=chrUn_KI270412v1,length=1179>
##contig=<ID=chrUn_KI270411v1,length=2646>
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##contig=<ID=chrUn_KI270419v1,length=1029>
##contig=<ID=chrUn_KI270418v1,length=2145>
##contig=<ID=chrUn_KI270420v1,length=2321>
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##contig=<ID=chrUn_KI270587v1,length=2969>
##contig=<ID=chrUn_KI270580v1,length=1553>
##contig=<ID=chrUn_KI270581v1,length=7046>
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##contig=<ID=chrUn_KI270589v1,length=44474>
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##contig=<ID=chrUn_KI270582v1,length=6504>
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##contig=<ID=chrUn_KI270330v1,length=1652>
##contig=<ID=chrUn_KI270329v1,length=1040>
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##contig=<ID=chrUn_KI270366v1,length=8320>
##contig=<ID=chrUn_KI270378v1,length=1048>
##contig=<ID=chrUn_KI270379v1,length=1045>
##contig=<ID=chrUn_KI270389v1,length=1298>
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##contig=<ID=chrUn_KI270386v1,length=1788>
##contig=<ID=chrUn_KI270391v1,length=1484>
##contig=<ID=chrUn_KI270383v1,length=1750>
##contig=<ID=chrUn_KI270393v1,length=1308>
##contig=<ID=chrUn_KI270384v1,length=1658>
##contig=<ID=chrUn_KI270392v1,length=971>
##contig=<ID=chrUn_KI270381v1,length=1930>
##contig=<ID=chrUn_KI270385v1,length=990>
##contig=<ID=chrUn_KI270382v1,length=4215>
##contig=<ID=chrUn_KI270376v1,length=1136>
##contig=<ID=chrUn_KI270374v1,length=2656>
##contig=<ID=chrUn_KI270372v1,length=1650>
##contig=<ID=chrUn_KI270373v1,length=1451>
##contig=<ID=chrUn_KI270375v1,length=2378>
##contig=<ID=chrUn_KI270371v1,length=2805>
##contig=<ID=chrUn_KI270448v1,length=7992>
##contig=<ID=chrUn_KI270521v1,length=7642>
##contig=<ID=chrUn_GL000195v1,length=182896>
##contig=<ID=chrUn_GL000219v1,length=179198>
##contig=<ID=chrUn_GL000220v1,length=161802>
##contig=<ID=chrUn_GL000224v1,length=179693>
##contig=<ID=chrUn_KI270741v1,length=157432>
##contig=<ID=chrUn_GL000226v1,length=15008>
##contig=<ID=chrUn_GL000213v1,length=164239>
##contig=<ID=chrUn_KI270743v1,length=210658>
##contig=<ID=chrUn_KI270744v1,length=168472>
##contig=<ID=chrUn_KI270745v1,length=41891>
##contig=<ID=chrUn_KI270746v1,length=66486>
##contig=<ID=chrUn_KI270747v1,length=198735>
##contig=<ID=chrUn_KI270748v1,length=93321>
##contig=<ID=chrUn_KI270749v1,length=158759>
##contig=<ID=chrUn_KI270750v1,length=148850>
##contig=<ID=chrUn_KI270751v1,length=150742>
##contig=<ID=chrUn_KI270752v1,length=27745>
##contig=<ID=chrUn_KI270753v1,length=62944>
##contig=<ID=chrUn_KI270754v1,length=40191>
##contig=<ID=chrUn_KI270755v1,length=36723>
##contig=<ID=chrUn_KI270756v1,length=79590>
##contig=<ID=chrUn_KI270757v1,length=71251>
##contig=<ID=chrUn_GL000214v1,length=137718>
##contig=<ID=chrUn_KI270742v1,length=186739>
##contig=<ID=chrUn_GL000216v2,length=176608>
##contig=<ID=chrUn_GL000218v1,length=161147>
##contig=<ID=chrEBV,length=171823>
##FILTER=<ID=Duplicate_with_close_SV,Description="When multiple SVs that share breakpoints in close proximity are detected, all but one SVs are filtered.">
##FILTER=<ID=Duplicate_with_insertion,Description="Breakend SVs that are inferred to be the same as any of detected insertions">
##FILTER=<ID=Duplicate_with_close_insertion,Description="When multiple insertions in close proximity are detected, all but one insertions are filtered.">
##FILTER=<ID=SV_with_decoy,Description="SVs involving decoy contigs">
##FILTER=<ID=Too_small_size,Description="Insertions whose size is below the threshould (currently 100bp)">
##FILTER=<ID=Too_low_VAF,Description="SVs whose variant allele frequencies are inferred to be low">
##INFO=<ID=SVTYPE,Number=1,Type=String,Description="Type of structural variant">
##INFO=<ID=SVLEN,Number=1,Type=Integer,Description="Difference in length between REF and ALT alleles">
##INFO=<ID=END,Number=1,Type=Integer,Description="End position of the variant described in this record">
##INFO=<ID=MATEID,Number=1,Type=String,Description="ID of mate breakend">
##INFO=<ID=SVINSLEN,Number=1,Type=Integer,Description="Length of insertion">
##INFO=<ID=SVINSSEQ,Number=1,Type=String,Description="Sequence of insertion">
##ALT=<ID=DEL,Description="Deletion">
##ALT=<ID=INS,Description="Insertion">
##ALT=<ID=DUP,Description="Duplication">
##FORMAT=<ID=TR,Number=1,Type=Integer,Description="The number of reads around the breakpoints">
##FORMAT=<ID=VR,Number=1,Type=Integer,Description="The number of variant supporting reads determined in the validation realignment step">
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	TUMOR	CONTROL
chr1	105993333	d_23	A	<DEL>	.	PASS	END=105993488;SVTYPE=DEL;SVLEN=-155	TR:VR	32:7	17:0
chr10	6210693	i_61	A	<INS>	.	PASS	END=6210693;SVTYPE=INS;SVINSLEN=607;SVINSSEQ=TAGACGGGGGTTTCGCCATGTTAGCCAGGATGGTCTTGATAGTGTTTTTAATAGACGGGGTTTCGCCATGTTAGCCAGGATGGTCTTGATAGTGTTTTTAATAGACGGGGTTTCGCCATGTTAGCCAGGATGGTCTTGATAGTGTTTTTACTAGACGGGGTTTCGCCATGTTAGCCAGGATAGTCTTGATAGTGTTTTTAATAGACGGGGTTTCGCCATGTTAGCCAGGATGGTCTTGATAGTGTTTTTAATAGACGGGGTTTCGCCATGTTAGCCAGGATGGTCTTGATAGTGTTTTTACTAGACGGGGTTTCGCCATGTTAGCCAGGATGGTCTTGATAGTGTTTTTAATAGACGGGGTTTCGCCATGTTAGCCAGGATGGTCTTGATAGTGTTTTTAATAGAGACGGGGTTTCGCCATGTTAGCCAGGATGGTCTTGACTGGTGTGTTTTTAATAGACGGGGTTTCGCCATGTTAGCCAGGATGGTCTTGATAGTGTTTTTAATAGACGGGGTTTCGCCATGTTGGCCAGGATGGTCTTGATAGTGTTTTTAATAGACGGGGTTTCGCCATGTTAGCCAGGATGGTCTTGATAGTGTTTTTACT	TR:VR	34:4	25:0
chr12	93360919	r_68_0	C	]chr2:169764318]A	.	PASS	SVTYPE=BND;MATEID=r_68_1	TR:VR	86:10	57:0
chr2	169764318	r_68_1	A	A[chr12:93360919[	.	PASS	SVTYPE=BND;MATEID=r_68_0	TR:VR	86:10	57:0
chr17	50672396	r_164	T	<DUP>	.	PASS	END=50905286;SVTYPE=DUP;SVLEN=232890	TR:VR	88:6	48:0
chr19	48532195	r_187_0	C	]chr2:169463638]A	.	Too_low_VAF	SVTYPE=BND;MATEID=r_187_1	TR:VR	91:4	53:0
chr2	169463638	r_187_1	A	A[chr19:48532195[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_187_0	TR:VR	91:4	53:0
chr10	130975221	i_82	T	<INS>	.	PASS	END=130975221;SVTYPE=INS;SVINSLEN=1049;SVINSSEQ=ATGATTAATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTCAGTAGATGTTTATTGAATGAATTAACAAATGAATGCATACCTCACAAAGTTCCCAACACTCAAAATACCAAAATCTTGATTGGTATACTTCATTGTGAAAAGCATTATAAAGACATCCCTAGAAAATAATATCAAATTTCATGAGAAGGAGATCACAACTAATAATCCATAAATATAACTTTTGCCAGCATTTAAGTGTCTTAGATTGCAGGCTTCTGCAAGATACACATTACTTGTAGTTTTGTATCCCCAGCATTTCCCATCCCAGTGTTGACATGCAATAGGCACCCAGCAGGTACTTACAAATTGAACTTATCCAATAACCCTTGCTCTTGTAACCAATCTTACAATAATATCTCTTCATAATGAATCATTCTTAATTCTCTTATTTCCTCCAAACTCTCCCTTGTTCTCTGTGTCAGTAAAACTCTGAAATTAAAAAGGGCTTTCAAGGTATATGATTTAAATGGATAAATTGCCAACTGCACTTCTATTTTAAATTTACGTTGTTACCTTTACAGCTAAAAAGTGCTTGAGAAAACATACTTTGTATTATAGGAGATCCAGTAGAATAGTTTCAACTCATATGGTATCTTACCCAAATCAAACTTCAGAAATTCACTAGTGATTCTTGCTAGTATGAATGGCTTCCATCATGCAAGTCCATTACACCTTGGAGCATAATCATGACCAAATCTAGGAGTTTCTCACTGATGGGACCAGTTCTTCATGCTCTTTTCTCAGCCTTAGAGAGTGGCCCTTCCATGTCCAAGAACAATGTGCTCAAATGTGAAATCTTAAGCAGCTTGTCAGTTTCACACAGCCTGTTGAATCCTTGAAGTAGTGACCATTTGCTTGTTAAAATAGAGAGTGACTTTGGAGAATAAGCATGTGGTGCATTTTATGGAAATTGCTCCATTTGGCAGCATCTGAGTATAAATTGGCATCTCAGCAGTGCAGCTGTGATTGTAATTGACTAAAGTTCTCAGCAGAAAGAGCTCTGACCA	TR:VR	27:11	29:0
chr17	59842643	r_165	A	<DUP>	.	PASS	END=59890695;SVTYPE=DUP;SVLEN=48052	TR:VR	80:9	35:0
chr20	26599966	i_488	A	<INS>	.	PASS	END=26599966;SVTYPE=INS;SVINSLEN=61;SVINSSEQ=GCATTCTCAGAAACTTGTTTGTGATGTGTGCCCTCAACTAACAGAGTTGAACCTTTCTTTT	TR:VR	19:3	9:0
chr5	176829881	i_702	C	<INS>	.	PASS	END=176829881;SVTYPE=INS;SVINSLEN=1873;SVINSSEQ=TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCACTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTACCACCTATGAGTGAGAATATGCGGTGATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGAGACAAACAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTTGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGCCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATTGCTCCTTTT	TR:VR	47:11	25:0
chr1	110690284	d_24	A	<DEL>	.	PASS	END=110692340;SVTYPE=DEL;SVLEN=-2056	TR:VR	36:4	24:0
chr10	131042423	i_83	T	<INS>	.	PASS	END=131042423;SVTYPE=INS;SVINSLEN=1454;SVINSSEQ=GGGTAAGATAGGGTATGGGGGGTGGGGGTAAAAGATAGGGTATCGGGGTGGGGTAAGATAGGGTATGGGGGTGGGGGTGTAGATAGGGTATGGGGGGTGGGTAAGATAGGGTATGGGGGTGGGGGTAGATAGGGTATGGGGGGTGGGGTAAGATAGGGTATGGGGGTGGGGTAAGATAGGGTATGGGGGTGGGTAAGATAGGGTATCAGGGGGTGGGTAAGATAGGGTATGGGGGGGGGTGGGGTAAAGATAGGGTGTCGGGGGGTGGGAGTAAGATAGGGTATGGGGGTGGGGTAAGATAGGGTATGGGGGTGGGGTAAGATAGGGTATGGGGGTGGGTAAGATAGGGTATCGGGGGGGTGGGTAAGATAGGGTATGGGGGGTGGGGTAAAGATAGGGTATGGGGGTGGGTAAGATAGGGTATCGGGGGTGCGGTAAGATAGAGGGTATGGGGGTGGGGTAAAGATAGGGTATGGGGGTGGGTAAGATAGGGTAAATCGGGGTGCGGTAAGATAGGGTATGGGGGGTGGGGGTAAGATAGGGTGTGGGGGGTGGGGTAAGATAGGGTATGGGGGGTGGGGTAAGATAGGGTGTCGGGGGTGGGGTAAGATAGGGTATGGGGGGTGGGGTAAGATAGGGTATGGGGGTGGGTAAGATAGGGTATGGGGGATGGGGTAAGATAGGGTATGGGGGGTGGGGTAAGATGGGGTATGGGGGTGGGTAAGATAGGGTATCGGGGGTGGGGGAGGTAAGATAGGGTATGGGGGGTGGGGTAAGATAGGGTATGGGGGGTGGGGTAAGATAGGGTATGGGGGTGGGGTAAGATAGGGTATGGGGGGTGGGGTAAGATAGGGTATGGGGGTGGGGGTAAGATAGGGTATGGGGAGTGAGGTAAGATAGGGTGTCGGGGGTGGGAGTAAGATAGGGTATGGGGGTGGGGTAAGATAGGGTATGGGGGTGGGTAGATAGGGTATCGGGGTGCGGTAAGATAGGGTATGGGGGTGGGGTAAGATAGGGTATGGGGGTGGGTAGAATAGGGTATCGGGGTGCGGTAAGATAGGGTATGGGGGGTGGGGTAAGATAGGGTATGGGGGGTGGGGTAAAGATAGGGTATGGGGGGTGGGGTAAGATAGGGTGTCGGGGGTGGGAGTAAGATAGGGTATGGGGGGTAGGGGGTAAGATAGGGTATGGGGTGGGTAAGATAGGGTATCGGGGATGGGGTAAAAGATAGGGTATGGGGGGTGGGGTAAGATAGGGTATCGGGGTGCGGTAAGATAGGGTATGGGGTGGGGTAGATAGGGTATGGGGGTGGGTAAGATAGGGTATCGGGGTGCGGTAAGATAGGGTATGGGGGGGTGGGGTAAGATAGGGTATGGGGGGTGGGGTAAGATAGGGTATCGGGGTGCGGTAAGATAGGGTATGGGGGTGGGGTAAGATAGGGTATGGGGGGGTGG	TR:VR	24:4	25:0
chr12	100171780	r_82_0	C	C[chr2:195296887[	.	PASS	SVTYPE=BND;MATEID=r_82_1	TR:VR	61:13	43:0
chr2	195296887	r_82_1	C	]chr12:100171780]C	.	PASS	SVTYPE=BND;MATEID=r_82_0	TR:VR	61:13	43:0
chr12	93411718	r_70_0	G	[chr12:94782803[T	.	Too_low_VAF	SVTYPE=BND;MATEID=r_70_1	TR:VR	94:3	58:0
chr12	94782803	r_70_1	T	[chr12:93411718[T	.	Too_low_VAF	SVTYPE=BND;MATEID=r_70_0	TR:VR	94:3	58:0
chr19	49949139	r_189	C	<DUP>	.	Too_low_VAF	END=50117201;SVTYPE=DUP;SVLEN=168062	TR:VR	101:3	64:0
chr2	172241299	r_222	A	<DUP>	.	PASS	END=204532904;SVTYPE=DUP;SVLEN=32291605	TR:VR	68:9	41:0
chr12	108597273	r_83	G	<DUP>	.	Too_low_VAF	END=108709315;SVTYPE=DUP;SVLEN=112042	TR:VR	68:3	49:0
chr12	94222287	r_71_0	A	A]chr12:97884895]	.	PASS	SVTYPE=BND;MATEID=r_71_1	TR:VR	86:7	57:0
chr12	97884895	r_71_1	G	G]chr12:94222287]	.	PASS	SVTYPE=BND;MATEID=r_71_0	TR:VR	86:7	57:0
chr17	7671492	d_401	G	<DEL>	.	PASS	END=7673765;SVTYPE=DEL;SVLEN=-2273	TR:VR	28:10	36:0
chr2	174875499	r_223_0	A	A]chr2:176950423]	.	PASS	SVTYPE=BND;MATEID=r_223_1	TR:VR	94:15	49:0
chr2	176950423	r_223_1	C	C]chr2:174875499]	.	PASS	SVTYPE=BND;MATEID=r_223_0	TR:VR	94:15	49:0
chr12	94474003	r_72_0	T	TGAAAATGTCACAGGCCAAGCCACAAAACGAGCATTCTTTAAA[chr2:203864554[	.	PASS	SVTYPE=BND;MATEID=r_72_1;SVINSLEN=42;SVINSSEQ=GAAAATGTCACAGGCCAAGCCACAAAACGAGCATTCTTTAAA	TR:VR	78:8	50:0
chr2	203864554	r_72_1	C	]chr12:94474003]TTTAAAGAATGCTCGTTTTGTGGCTTGGCCTGTGACATTTTCC	.	PASS	SVTYPE=BND;MATEID=r_72_0;SVINSLEN=42;SVINSSEQ=TTTAAAGAATGCTCGTTTTGTGGCTTGGCCTGTGACATTTTC	TR:VR	78:8	50:0
chr2	174933618	r_224_0	C	[chr2:198020871[CT	.	PASS	SVTYPE=BND;MATEID=r_224_1;SVINSLEN=1;SVINSSEQ=C	TR:VR	92:10	61:0
chr2	198020871	r_224_1	T	[chr2:174933618[GT	.	PASS	SVTYPE=BND;MATEID=r_224_0;SVINSLEN=1;SVINSSEQ=G	TR:VR	92:10	61:0
chr20	63404635	r_246_0	G	[chr20:63490524[G	.	PASS	SVTYPE=BND;MATEID=r_246_1	TR:VR	61:5	48:0
chr20	63490524	r_246_1	G	[chr20:63404635[G	.	PASS	SVTYPE=BND;MATEID=r_246_0	TR:VR	61:5	48:0
chr3	52407099	r_264_0	C	C[chr6:24397956[	.	PASS	SVTYPE=BND;MATEID=r_264_1	TR:VR	43:9	47:0
chr6	24397956	r_264_1	T	]chr3:52407099]T	.	PASS	SVTYPE=BND;MATEID=r_264_0	TR:VR	43:9	47:0
chr7	158910064	r_313	G	<DUP>	.	PASS	END=159298783;SVTYPE=DUP;SVLEN=388719	TR:VR	75:9	51:0
chr10	70130264	r_35	C	<DUP>	.	PASS	END=70376020;SVTYPE=DUP;SVLEN=245756	TR:VR	73:8	62:0
chr12	97618083	r_73_0	A	[chr12:100085022[CA	.	Too_low_VAF	SVTYPE=BND;MATEID=r_73_1;SVINSLEN=1;SVINSSEQ=C	TR:VR	67:3	57:0
chr12	100085022	r_73_1	A	[chr12:97618083[GA	.	Too_low_VAF	SVTYPE=BND;MATEID=r_73_0;SVINSLEN=1;SVINSSEQ=G	TR:VR	67:3	57:0
chr18	2100141	r_169	T	<DUP>	.	PASS	END=2128253;SVTYPE=DUP;SVLEN=28112	TR:VR	70:5	41:0
chr2	174939529	r_225_0	T	TTGTTGAAAAATAGCTATATTATTCCTTTCTTAAAATAATTTGAGAC]chr2:195708205]	.	PASS	SVTYPE=BND;MATEID=r_225_1;SVINSLEN=46;SVINSSEQ=TGTTGAAAAATAGCTATATTATTCCTTTCTTAAAATAATTTGAGAC	TR:VR	80:10	58:0
chr2	195708205	r_225_1	T	TGTCTCAAATTATTTTAAGAAAGGAATAATATAGCTATTTTTCAACA]chr2:174939529]	.	PASS	SVTYPE=BND;MATEID=r_225_0;SVINSLEN=46;SVINSSEQ=GTCTCAAATTATTTTAAGAAAGGAATAATATAGCTATTTTTCAACA	TR:VR	80:10	58:0
chr20	63458592	r_247_0	A	ATGGATGTGGGGTCAGAGGGACATGTTTCTAGAAATGGAGGTGGGGTCAGAGGGGCATGTTT]chr20:63607864]	.	PASS	SVTYPE=BND;MATEID=r_247_1;SVINSLEN=61;SVINSSEQ=TGGATGTGGGGTCAGAGGGACATGTTTCTAGAAATGGAGGTGGGGTCAGAGGGGCATGTTT	TR:VR	68:5	39:0
chr20	63607864	r_247_1	G	GAAACATGCCCCTCTGACCCCACCTCCATTTCTAGAAACATGTCCCTCTGACCCCACATCCA]chr20:63458592]	.	PASS	SVTYPE=BND;MATEID=r_247_0;SVINSLEN=61;SVINSSEQ=AAACATGCCCCTCTGACCCCACCTCCATTTCTAGAAACATGTCCCTCTGACCCCACATCCA	TR:VR	68:5	39:0
chr3	52408943	r_265_0	A	]chr6:24398023]CG	.	PASS	SVTYPE=BND;MATEID=r_265_1;SVINSLEN=1;SVINSSEQ=C	TR:VR	39:14	49:0
chr6	24398023	r_265_1	G	GG[chr3:52408943[	.	PASS	SVTYPE=BND;MATEID=r_265_0;SVINSLEN=1;SVINSSEQ=G	TR:VR	39:14	49:0
chr7	106027108	r_307	C	<DUP>	.	Too_low_VAF	END=106231984;SVTYPE=DUP;SVLEN=204876	TR:VR	74:3	49:0
chr12	98937763	r_74_0	T	[chr4:188931707[T	.	Too_low_VAF	SVTYPE=BND;MATEID=r_74_1	TR:VR	62:3	57:0
chr4	188931707	r_74_1	T	[chr12:98937763[T	.	Too_low_VAF	SVTYPE=BND;MATEID=r_74_0	TR:VR	62:3	57:0
chr2	174984087	r_226_0	A	A]chr2:177312924]	.	PASS	SVTYPE=BND;MATEID=r_226_1	TR:VR	79:10	47:0
chr2	177312924	r_226_1	T	T]chr2:174984087]	.	PASS	SVTYPE=BND;MATEID=r_226_0	TR:VR	79:10	47:0
chr2	175937651	r_227_0	T	T[chr5:106083615[	.	PASS	SVTYPE=BND;MATEID=r_227_1	TR:VR	102:9	53:0
chr5	106083615	r_227_1	A	]chr2:175937651]A	.	PASS	SVTYPE=BND;MATEID=r_227_0	TR:VR	102:9	53:0
chr2	87413963	i_410	C	<INS>	.	Too_low_VAF	END=87413963;SVTYPE=INS;SVINSLEN=268;SVINSSEQ=AGCCAGCAGCCAAGCCAAGCCTGCCAGCCAAGGTCAGCCAAGCCAGCCAAGCCAGCCAAGCCAGCCAAGCCAGCCCAGCCATCCTAAGCCAGCCAGCCAGCCAAGCCAGATGAAGCCAGCCCAAGCCAGCCAAGCCAGCCAAGCAAGCCCAGCCAGCCAAGCCAGCCAGCCAGCCAGCCAAGCCAGCCAGCCAGTCATGTAGCCAAGCCAAGCCAGCCAGCCGGCCAGGCCAGCCAAACCAGCCAGCCAGCCAGGCCAGACCAGCCAA	TR:VR	200:4	189:0
chr10	83183620	i_78	T	<INS>	.	PASS	END=83183620;SVTYPE=INS;SVINSLEN=357;SVINSSEQ=AAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGTAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGTGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAA	TR:VR	29:10	26:0
chr12	98971933	r_76_0	T	]chr2:195425501]G	.	PASS	SVTYPE=BND;MATEID=r_76_1	TR:VR	76:7	47:0
chr2	195425501	r_76_1	G	G[chr12:98971933[	.	PASS	SVTYPE=BND;MATEID=r_76_0	TR:VR	76:7	47:0
chr15	34688407	i_228	G	<INS>	.	PASS	END=34688407;SVTYPE=INS;SVINSLEN=72;SVINSSEQ=CTGTTACACAGGAACAATAGATTAACTGGAAGTCTTAGAGCCCTTCCTGGAACGGGTTAATCAGAACCCAAC	TR:VR	33:8	26:0
chr2	1778963	r_191	G	<DUP>	.	PASS	END=1823397;SVTYPE=DUP;SVLEN=44434	TR:VR	76:10	59:0
chr9	136494151	r_329	T	<DUP>	.	PASS	END=137828370;SVTYPE=DUP;SVLEN=1334219	TR:VR	54:3	49:0
chr10	85743504	i_79	T	<INS>	.	PASS	END=85743504;SVTYPE=INS;SVINSLEN=477;SVINSSEQ=ATAAAATACCTTAACATGTTCACATTACTTTTTTAATTCACAAAAACGTTCTTATCTATCTTTATTTTAAGATGTTTTCCACATACATGCTTAGTGAATTTTCTTTTAGGAGATGTAAGAGAGTCTACAAATCTTTATTCTACTATTTCCCAAAATATACCCAATTACTGGCAAAAAATGTTATTATTAAACTGATGAGAAAATATAAAGGTTTATTACTGGATTAAATAAGTTTTTCCATATGCTTGAATTTTTATACACACAGTATATACTCTATTATATGTATACACAGAATACAACTCTATCAGTATTGAACTTAGTTTGTCATTCCATAAAATGGCCATAGATGGCCAGATCAAGTAATCCTACTCATTTTACCCTGTATTACTGAAAATAAAAATGGGGGGGCAAATAAAGACTTTAATATCTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	TR:VR	42:6	19:0
chr12	99479270	r_77_0	T	T]chr2:167370219]	.	PASS	SVTYPE=BND;MATEID=r_77_1	TR:VR	95:5	47:0
chr2	167370219	r_77_1	A	A]chr12:99479270]	.	PASS	SVTYPE=BND;MATEID=r_77_0	TR:VR	95:5	47:0
chr15	34848859	r_120	A	<DUP>	.	PASS	END=34979297;SVTYPE=DUP;SVLEN=130438	TR:VR	49:6	56:0
chr2	179909873	d_558	A	<DEL>	.	PASS	END=179910381;SVTYPE=DEL;SVLEN=-508	TR:VR	41:10	28:0
chr12	99479578	r_78	G	<DUP>	.	PASS	END=99622817;SVTYPE=DUP;SVLEN=143239	TR:VR	58:8	58:0
chr15	35445917	r_121	T	<DUP>	.	PASS	END=35474667;SVTYPE=DUP;SVLEN=28750	TR:VR	44:3	48:0
chr2	182145318	r_228_0	T	TAA]chr7:29622449]	.	PASS	SVTYPE=BND;MATEID=r_228_1;SVINSLEN=2;SVINSSEQ=AA	TR:VR	89:9	61:0
chr7	29622449	r_228_1	T	TTT]chr2:182145318]	.	PASS	SVTYPE=BND;MATEID=r_228_0;SVINSLEN=2;SVINSSEQ=TT	TR:VR	89:9	61:0
chr10	95205394	r_38_0	T	]chr19:1149220]TAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAATAT	.	PASS	SVTYPE=BND;MATEID=r_38_1;SVINSLEN=47;SVINSSEQ=TAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAATA	TR:VR	47:4	50:0
chr19	1149220	r_38_1	T	TTATTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTA[chr10:95205394[	.	PASS	SVTYPE=BND;MATEID=r_38_0;SVINSLEN=47;SVINSSEQ=TATTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTA	TR:VR	47:4	50:0
chr12	99494881	r_79_0	A	A[chr2:177934978[	.	PASS	SVTYPE=BND;MATEID=r_79_1	TR:VR	66:6	48:0
chr2	177934978	r_79_1	A	]chr12:99494881]A	.	PASS	SVTYPE=BND;MATEID=r_79_0	TR:VR	66:6	48:0
chr15	36802885	r_122_0	C	[chr6:1746840[T	.	PASS	SVTYPE=BND;MATEID=r_122_1	TR:VR	45:3	59:0
chr6	1746840	r_122_1	T	[chr15:36802885[T	.	PASS	SVTYPE=BND;MATEID=r_122_0	TR:VR	45:3	59:0
chr16	914488	r_133	A	<DUP>	.	PASS	END=914857;SVTYPE=DUP;SVLEN=369;SVINSLEN=26;SVINSSEQ=CCCTCCCTCCCTCCATGACTATCGGT	TR:VR	29:8	26:0
chr7	120530129	r_308	G	<DUP>	.	Too_low_VAF	END=122477850;SVTYPE=DUP;SVLEN=1947721	TR:VR	76:3	46:0
chr12	125946881	r_84_0	G	]chr2:194660856]T	.	PASS	SVTYPE=BND;MATEID=r_84_1	TR:VR	46:6	52:0
chr2	194660856	r_84_1	T	T[chr12:125946881[	.	PASS	SVTYPE=BND;MATEID=r_84_0	TR:VR	46:6	52:0
chr12	99620104	r_80_0	T	]chr2:167373061]AACCTTATGTAAAAATCAATTGGCTATATAGGTATAGGCCTAG	.	PASS	SVTYPE=BND;MATEID=r_80_1;SVINSLEN=42;SVINSSEQ=AACCTTATGTAAAAATCAATTGGCTATATAGGTATAGGCCTA	TR:VR	97:8	41:0
chr2	167373061	r_80_1	G	GTAGGCCTATACCTATATAGCCAATTGATTTTTACATAAGGTT[chr12:99620104[	.	PASS	SVTYPE=BND;MATEID=r_80_0;SVINSLEN=42;SVINSSEQ=TAGGCCTATACCTATATAGCCAATTGATTTTTACATAAGGTT	TR:VR	97:8	41:0
chr15	49369559	r_123	G	<DUP>	.	PASS	END=101775257;SVTYPE=DUP;SVLEN=52405698	TR:VR	51:4	44:0
chr2	193347909	i_471	T	<INS>	.	PASS	END=193347909;SVTYPE=INS;SVINSLEN=289;SVINSSEQ=AAGATGGAGTTACTCTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGTGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAGAATTGTAAAAAAAAAAAAAATTATAAATAAAACAAAGAAGAATATGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	TR:VR	29:12	31:0
chr7	126022273	r_309	T	<DUP>	.	PASS	END=126428013;SVTYPE=DUP;SVLEN=405740	TR:VR	92:8	53:0
chr8	141590995	r_319	A	<DUP>	.	PASS	END=141885998;SVTYPE=DUP;SVLEN=295003	TR:VR	72:8	47:0
chr10	95525011	r_39_0	C	CCTGCTATTAAC[chr19:860855[	.	PASS	SVTYPE=BND;MATEID=r_39_1;SVINSLEN=11;SVINSSEQ=CTGCTATTAAC	TR:VR	60:4	64:0
chr19	860855	r_39_1	C	]chr10:95525011]GTTAATAGCAGC	.	PASS	SVTYPE=BND;MATEID=r_39_0;SVINSLEN=11;SVINSSEQ=GTTAATAGCAG	TR:VR	60:4	64:0
chr12	99623326	r_81_0	T	]chr2:168742596]A	.	PASS	SVTYPE=BND;MATEID=r_81_1	TR:VR	99:9	57:0
chr2	168742596	r_81_1	A	A[chr12:99623326[	.	PASS	SVTYPE=BND;MATEID=r_81_0	TR:VR	99:9	57:0
chr15	54781969	r_124	C	<DUP>	.	PASS	END=56406390;SVTYPE=DUP;SVLEN=1624421	TR:VR	60:5	32:0
chr2	90391531	d_525	A	<DEL>	.	Too_low_VAF	END=90393385;SVTYPE=DEL;SVLEN=-1854	TR:VR	564:5	413:1
chr8	142757412	d_895	C	<DEL>	.	PASS	END=142757463;SVTYPE=DEL;SVLEN=-51;SVINSLEN=2;SVINSSEQ=TG	TR:VR	25:7	26:0
chr9	137026645	r_330	G	<DUP>	.	PASS	END=137058648;SVTYPE=DUP;SVLEN=32003	TR:VR	76:11	38:0
chr10	99196782	d_95	A	<DEL>	.	PASS	END=99197985;SVTYPE=DEL;SVLEN=-1203	TR:VR	25:8	16:0
chr18	506091	r_167_0	G	G]chr18:8306233]	.	PASS	SVTYPE=BND;MATEID=r_167_1	TR:VR	78:6	54:0
chr18	8306233	r_167_1	T	T]chr18:506091]	.	PASS	SVTYPE=BND;MATEID=r_167_0	TR:VR	78:6	54:0
chr2	198020901	r_230_0	A	A]chr2:198021319]	.	PASS	SVTYPE=BND;MATEID=r_230_1	TR:VR	47:10	33:0
chr2	198021319	r_230_1	A	A]chr2:198020901]	.	PASS	SVTYPE=BND;MATEID=r_230_0	TR:VR	47:10	33:0
chr6	159142142	r_301	C	<DUP>	.	PASS	END=159226415;SVTYPE=DUP;SVLEN=84273	TR:VR	58:4	48:0
chr7	21332632	r_303	T	<DUP>	.	Too_low_VAF	END=23763293;SVTYPE=DUP;SVLEN=2430661	TR:VR	85:4	41:0
chr10	16684656	d_68	T	<DEL>	.	Too_small_size	END=16684692;SVTYPE=DEL;SVLEN=-36	TR:VR	36:6	32:0
chr15	64619269	r_125_0	G	[chr17:39797145[TGCCACGAACAA	.	Too_low_VAF	SVTYPE=BND;MATEID=r_125_1;SVINSLEN=11;SVINSSEQ=TGCCACGAACA	TR:VR	526:3	45:0
chr17	39797145	r_125_1	A	[chr15:64619269[TGTTCGTGGCAA	.	Too_low_VAF	SVTYPE=BND;MATEID=r_125_0;SVINSLEN=11;SVINSSEQ=TGTTCGTGGCA	TR:VR	526:3	45:0
chr18	5128148	r_171_0	A	A]chr6:32530482]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_171_1	TR:VR	79:3	68:0
chr6	32530482	r_171_1	T	T]chr18:5128148]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_171_0	TR:VR	79:3	68:0
chr11	103050306	r_49	A	<DUP>	.	PASS	END=103267962;SVTYPE=DUP;SVLEN=217656	TR:VR	59:5	36:0
chr15	65386092	r_126_0	G	G]chr6:41554531]	.	PASS	SVTYPE=BND;MATEID=r_126_1	TR:VR	59:9	52:0
chr6	41554531	r_126_1	A	A]chr15:65386092]	.	PASS	SVTYPE=BND;MATEID=r_126_0	TR:VR	59:9	52:0
chr17	83068637	d_421	G	<INS>	.	Too_small_size	END=83068623;SVTYPE=INS;SVINSLEN=21;SVINSSEQ=GGCGACAATGGGGGTCCCGGG	TR:VR	38:3	24:0
chr18	5161247	r_172_0	A	[chr18:10976014[A	.	PASS	SVTYPE=BND;MATEID=r_172_1	TR:VR	72:5	58:0
chr18	10976014	r_172_1	A	[chr18:5161247[A	.	PASS	SVTYPE=BND;MATEID=r_172_0	TR:VR	72:5	58:0
chr2	198951002	r_231	G	<DEL>	.	PASS	END=201074519;SVTYPE=DEL;SVLEN=-2123517	TR:VR	60:6	48:0
chr4	112313134	r_279	G	<DEL>	.	PASS	END=112463431;SVTYPE=DEL;SVLEN=-150297	TR:VR	60:6	62:0
chr7	23658531	d_829	T	<DEL>	.	Too_small_size	END=23658571;SVTYPE=DEL;SVLEN=-40	TR:VR	55:3	21:0
chr11	103298170	r_50_0	T	T]chr11:112111649]	.	PASS	SVTYPE=BND;MATEID=r_50_1	TR:VR	58:6	50:0
chr11	112111649	r_50_1	T	T]chr11:103298170]	.	PASS	SVTYPE=BND;MATEID=r_50_0	TR:VR	58:6	50:0
chr17	21399780	r_138_0	A	]chr9:61669200]G	.	PASS	SVTYPE=BND;MATEID=r_138_1	TR:VR	53:3	56:0
chr9	61669200	r_138_1	G	G[chr17:21399780[	.	PASS	SVTYPE=BND;MATEID=r_138_0	TR:VR	53:3	56:0
chr18	5162615	r_173	C	<DEL>	.	PASS	END=6533968;SVTYPE=DEL;SVLEN=-1371353	TR:VR	78:5	50:0
chr2	90392709	d_527	T	<DEL>	.	Too_low_VAF	END=90392816;SVTYPE=DEL;SVLEN=-107;SVINSLEN=12;SVINSSEQ=AGAATGGAATCG	TR:VR	549:5	406:0
chr4	11347492	r_273	G	<DUP>	.	PASS	END=11734619;SVTYPE=DUP;SVLEN=387127	TR:VR	73:6	39:0
chr7	25053311	d_830	A	<DEL>	.	PASS	END=25055095;SVTYPE=DEL;SVLEN=-1784	TR:VR	38:11	27:0
chr11	104034514	r_51_0	T	[chr15:48764381[C	.	PASS	SVTYPE=BND;MATEID=r_51_1	TR:VR	53:5	37:0
chr15	48764381	r_51_1	C	[chr11:104034514[C	.	PASS	SVTYPE=BND;MATEID=r_51_0	TR:VR	53:5	37:0
chr12	131602041	r_85_0	C	[chr2:195969746[GA	.	PASS	SVTYPE=BND;MATEID=r_85_1;SVINSLEN=1;SVINSSEQ=G	TR:VR	56:11	63:0
chr2	195969746	r_85_1	A	[chr12:131602041[CA	.	PASS	SVTYPE=BND;MATEID=r_85_0;SVINSLEN=1;SVINSSEQ=C	TR:VR	56:11	63:0
chr14	22636220	r_98_0	C	[chrX:131096752[T	.	Too_low_VAF	SVTYPE=BND;MATEID=r_98_1	TR:VR	90:3	68:1
chrX	131096752	r_98_1	T	[chr14:22636220[T	.	Too_low_VAF	SVTYPE=BND;MATEID=r_98_0	TR:VR	90:3	68:1
chr2	201271472	r_232	T	<DEL>	.	PASS	END=201887888;SVTYPE=DEL;SVLEN=-616416;SVINSLEN=17;SVINSSEQ=TAGAAATCTTTTCCCAA	TR:VR	52:5	49:0
chr10	24062374	r_28	T	<DUP>	.	PASS	END=24348994;SVTYPE=DUP;SVLEN=286620	TR:VR	78:11	53:0
chr12	131637217	r_86_0	T	]chr2:178153787]C	.	PASS	SVTYPE=BND;MATEID=r_86_1	TR:VR	65:14	61:0
chr2	178153787	r_86_1	C	C[chr12:131637217[	.	PASS	SVTYPE=BND;MATEID=r_86_0	TR:VR	65:14	61:0
chr15	78262612	r_127	A	<DUP>	.	Too_low_VAF	END=96337880;SVTYPE=DUP;SVLEN=18075268;SVINSLEN=1;SVINSSEQ=C	TR:VR	63:3	48:0
chr2	208804622	r_233_0	A	]chrUn_KI270442v1:178641]CAGGGCTG	.	Too_low_VAF	SVTYPE=BND;MATEID=r_233_1;SVINSLEN=7;SVINSSEQ=CAGGGCT	TR:VR	73:3	75:0
chrUn_KI270442v1	178641	r_233_1	G	GAGCCCTG[chr2:208804622[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_233_0;SVINSLEN=7;SVINSSEQ=AGCCCTG	TR:VR	73:3	75:0
chr4	125416284	r_280	A	<DUP>	.	PASS	END=125488209;SVTYPE=DUP;SVLEN=71925;SVINSLEN=20;SVINSSEQ=CTATATACTATACTATATAC	TR:VR	67:6	41:0
chr6	1650607	r_293	G	<DUP>	.	PASS	END=20891719;SVTYPE=DUP;SVLEN=19241112	TR:VR	57:3	44:0
chr12	131654080	r_87	T	<DUP>	.	PASS	END=131712116;SVTYPE=DUP;SVLEN=58036	TR:VR	74:4	45:0
chr2	211407632	r_234	G	<DEL>	.	PASS	END=212469578;SVTYPE=DEL;SVLEN=-1061946;SVINSLEN=46;SVINSSEQ=AAAAACCATTATAGGAAAGACAGCATTATCAGGAGATGATAATAAA	TR:VR	41:11	51:0
chr15	83820920	r_128	A	<DUP>	.	PASS	END=100100633;SVTYPE=DUP;SVLEN=16279713	TR:VR	67:10	59:0
chr18	6525863	r_174	A	<DUP>	.	PASS	END=8306882;SVTYPE=DUP;SVLEN=1781019	TR:VR	66:7	50:0
chr2	212506751	r_235	A	<DEL>	.	PASS	END=212549113;SVTYPE=DEL;SVLEN=-42362	TR:VR	47:11	45:0
chr7	142087407	r_310	G	<DEL>	.	PASS	END=142090117;SVTYPE=DEL;SVLEN=-2710	TR:VR	35:3	23:0
chrX	6653556	r_337	T	<DUP>	.	PASS	END=7170035;SVTYPE=DUP;SVLEN=516479	TR:VR	50:5	42:0
chr14	26224082	r_99_0	G	[chr22_KI270734v1_random:120689[GTAACATATATTATTTGATATATGATATATATTATGAAATATAAAATAATGTAATATGGAGTGCAATAATATGAATTCACTGATATAATATAATATATTACCTTGGTGTGACCAGAAGATCAGGCAGAGAAGGAA	.	Too_low_VAF	SVTYPE=BND;MATEID=r_99_1;SVINSLEN=134;SVINSSEQ=GTAACATATATTATTTGATATATGATATATATTATGAAATATAAAATAATGTAATATGGAGTGCAATAATATGAATTCACTGATATAATATAATATATTACCTTGGTGTGACCAGAAGATCAGGCAGAGAAGGA	TR:VR	343:3	303:0
chr22_KI270734v1_random	120689	r_99_1	A	[chr14:26224082[TCCTTCTCTGCCTGATCTTCTGGTCACACCAAGGTAATATATTATATTATATCAGTGAATTCATATTATTGCACTCCATATTACATTATTTTATATTTCATAATATATATCATATATCAAATAATATATGTTACA	.	Too_low_VAF	SVTYPE=BND;MATEID=r_99_0;SVINSLEN=134;SVINSSEQ=TCCTTCTCTGCCTGATCTTCTGGTCACACCAAGGTAATATATTATATTATATCAGTGAATTCATATTATTGCACTCCATATTACATTATTTTATATTTCATAATATATATCATATATCAAATAATATATGTTAC	TR:VR	343:3	303:0
chr15	85736793	r_129_0	C	CAGCC[chr17:81733311[	.	PASS	SVTYPE=BND;MATEID=r_129_1;SVINSLEN=4;SVINSSEQ=AGCC	TR:VR	63:4	59:0
chr17	81733311	r_129_1	T	]chr15:85736793]GGCTT	.	PASS	SVTYPE=BND;MATEID=r_129_0;SVINSLEN=4;SVINSSEQ=GGCT	TR:VR	63:4	59:0
chr2	214337368	r_236	G	<DUP>	.	PASS	END=216196518;SVTYPE=DUP;SVLEN=1859150	TR:VR	44:6	50:0
chr4	151161126	r_281	T	<DUP>	.	PASS	END=151508157;SVTYPE=DUP;SVLEN=347031	TR:VR	76:8	37:0
chrX	6734580	r_338	C	<DEL>	.	PASS	END=7368310;SVTYPE=DEL;SVLEN=-633730	TR:VR	47:7	42:0
chr10	26641807	i_63	T	<INS>	.	PASS	END=26641808;SVTYPE=INS;SVINSLEN=321;SVINSSEQ=CATATCTTTTATTTCATTTATTTTTTTGAGATGAAATTTCACTCTTGTTGCCCAGGCTGGAGTGCAATGGCACGATCTTAGGTCACTGTAACCTCTGCCTCCTGGGTTCAAGCGATTCTCCTGCCTTAGCCTCCTGAGTAGCTGGGATTAGAGTCATGCACCACCAAGCCCGACTAATTTTGTCTTTTTAGTAGAGACAGGGTTTCACCATGTTGGTCAGGCTAGTCTCGAACTCCTGACCTGAGGTGATCTGCTCACCTTGGCTTCCCAAAGTACTGGGATTACAGGTGTGAAATACCATCCCTGGCCAAAAAATTTCAT	TR:VR	37:3	21:0
chr11	107405118	r_52_0	T	T]chr11:109666207]	.	PASS	SVTYPE=BND;MATEID=r_52_1	TR:VR	51:5	58:0
chr11	109666207	r_52_1	T	T]chr11:107405118]	.	PASS	SVTYPE=BND;MATEID=r_52_0	TR:VR	51:5	58:0
chr14	27033797	r_100_0	T	T]chr14:27402222]	.	PASS	SVTYPE=BND;MATEID=r_100_1	TR:VR	61:5	46:0
chr14	27402222	r_100_1	T	T]chr14:27033797]	.	PASS	SVTYPE=BND;MATEID=r_100_0	TR:VR	61:5	46:0
chr15	92230527	r_130_0	G	G[chr6:20890315[	.	PASS	SVTYPE=BND;MATEID=r_130_1	TR:VR	51:3	51:0
chr6	20890315	r_130_1	G	]chr15:92230527]G	.	PASS	SVTYPE=BND;MATEID=r_130_0	TR:VR	51:3	51:0
chr18	682317	r_168_0	C	CATGTCCAAAATATTATA]chr18:6533906]	.	PASS	SVTYPE=BND;MATEID=r_168_1;SVINSLEN=17;SVINSSEQ=ATGTCCAAAATATTATA	TR:VR	84:10	52:0
chr18	6533906	r_168_1	G	GTATAATATTTTGGACAT]chr18:682317]	.	PASS	SVTYPE=BND;MATEID=r_168_0;SVINSLEN=17;SVINSSEQ=TATAATATTTTGGACAT	TR:VR	84:10	52:0
chr2	216715913	i_472	T	<INS>	.	Too_small_size	END=216715913;SVTYPE=INS;SVINSLEN=43;SVINSSEQ=CCTCGATGGGAGGATTACTTGAGCCTAAGAGTTTGAGACGGAC	TR:VR	39:4	19:0
chr4	76083990	r_277	T	<DUP>	.	PASS	END=77044551;SVTYPE=DUP;SVLEN=960561	TR:VR	59:4	43:0
chr7	142450120	r_311	G	<DUP>	.	Too_low_VAF	END=142526501;SVTYPE=DUP;SVLEN=76381	TR:VR	94:4	48:0
chr11	108690361	r_53_0	A	[chr11:111825935[GG	.	PASS	SVTYPE=BND;MATEID=r_53_1;SVINSLEN=1;SVINSSEQ=G	TR:VR	43:4	32:0
chr11	111825935	r_53_1	G	[chr11:108690361[CG	.	PASS	SVTYPE=BND;MATEID=r_53_0;SVINSLEN=1;SVINSSEQ=C	TR:VR	43:4	32:0
chr14	27155611	r_101_0	A	[chr14:27368458[T	.	PASS	SVTYPE=BND;MATEID=r_101_1	TR:VR	60:5	45:0
chr14	27368458	r_101_1	T	[chr14:27155611[T	.	PASS	SVTYPE=BND;MATEID=r_101_0	TR:VR	60:5	45:0
chr17	26670895	r_139	A	<DUP>	.	Too_low_VAF	END=39823971;SVTYPE=DUP;SVLEN=13153076	TR:VR	467:3	38:0
chr18	7534181	r_175_0	A	ACAAGTAACATGT]chr18:11710419]	.	PASS	SVTYPE=BND;MATEID=r_175_1;SVINSLEN=12;SVINSSEQ=CAAGTAACATGT	TR:VR	58:3	50:0
chr18	11710419	r_175_1	G	GACATGTTACTTG]chr18:7534181]	.	PASS	SVTYPE=BND;MATEID=r_175_0;SVINSLEN=12;SVINSSEQ=ACATGTTACTTG	TR:VR	58:3	50:0
chr14	27584106	r_102	T	<DEL>	.	PASS	END=28667350;SVTYPE=DEL;SVLEN=-1083244	TR:VR	73:4	59:0
chr7	44344284	r_304	G	<DUP>	.	PASS	END=44801936;SVTYPE=DUP;SVLEN=457652	TR:VR	99:5	59:0
chr8	144400196	r_320	G	<DUP>	.	PASS	END=144616638;SVTYPE=DUP;SVLEN=216442	TR:VR	56:8	38:0
chr16	1114145	i_235	C	<INS>	.	PASS	END=1114145;SVTYPE=INS;SVINSLEN=982;SVINSSEQ=CCCACTCACCACCCTCACACCCACCACCCCTCACCCCCCACTCACCACCCCTCACCCCCACTCACCACCCCTCACCCCCACTCACCACCCTCACCCCACTCACCACCCTCACCCCCACTCACCACCTCACTCTCACCACCACCCTCACCCCACTCATCACCCTCACCCCCACTCACCACCCTCACCCCCACCACCACCCTCACCCCACTCATCACCCTCACCCCACTCACCAGCCTCACCCCCACTCACCACCCTCACCCCACTCACCACCCTCACCCCCCACTCACCAGCCTCACCCCCACTCATCACCCTCACCCCCACTCACCACCCTCACCCCCACTCACCACCCCACCCCACCACCACCCCTCACCCCACTCACCACCCTCACCCCCACTCATCACCCTCACCCCCCCACTCACCAGCCACCCCCTCACCACACTCACCACACTCACCACCCTCACCCCACTCATCACCCTCACCTCCACTCACCACCCCTCACCCCCACTCACCAGCCTCACCCCACTCACCACCCCCACCCCACTCACCACCCTCACCCCACTCACCACCCTCACCCCCACTCACCACCCTCACCCCACTCACCACCCTCACCCCCACTCACCACCCTCACCCCCACTCACCACCCTCACCCCACTCACCACCCTCACCCCCACTCACCACCCTCACCCCCACTCACCACACCTCACTCCTCACCACCCTCACCCCACTCATCACCCTCACCCCCACTCACCAGCCTCACCCCACTCACCACCCTCACCCCCACTCATCACCCTCACCCCACTCATCAGCCTCACCCCCACTCACCACCCTCACCCCCACTCACCACCCCTCACCCCACTCACCTACCCTCACCCCACTCACCACCCTCACCCCCACTCACCACCCCCTCACCCCACTCACCACCCCCACCCCCTCACCAGCCTCACCCTCCACCACCACCCTCCACCCCACTCATCACCCTCAC	TR:VR	39:5	23:0
chr17	26968968	r_140	C	<DUP>	.	PASS	END=39346240;SVTYPE=DUP;SVLEN=12377272	TR:VR	104:6	45:0
chr7	44413331	r_305	G	<DUP>	.	PASS	END=44960855;SVTYPE=DUP;SVLEN=547524	TR:VR	97:7	47:0
chr14_GL000225v1_random	129504	d_302	C	<INS>	.	Too_low_VAF	END=129648;SVTYPE=INS;SVINSLEN=148;SVINSSEQ=TTGTCTACACTCTGCTTAGAGGAGGCTTTATGACTTACCAACTGCACTGATAACCTAGGTGATGTAACACTTGTCTAAGCTCGGTCTACACAGGAATTTGTGACTTATCTCTGCACTGATCAACTTAGGTGATGTAACTCTGGTCTAG	TR:VR	714:3	663:1
chr17	27231467	r_141_0	G	[chr17:27330101[C	.	PASS	SVTYPE=BND;MATEID=r_141_1	TR:VR	73:5	64:0
chr17	27330101	r_141_1	C	[chr17:27231467[C	.	PASS	SVTYPE=BND;MATEID=r_141_0	TR:VR	73:5	64:0
chr7	45818647	r_306	G	<DUP>	.	Too_low_VAF	END=46537296;SVTYPE=DUP;SVLEN=718649	TR:VR	91:4	46:0
chr11	130054368	d_116	C	<DEL>	.	PASS	END=130055971;SVTYPE=DEL;SVLEN=-1603;SVINSLEN=6;SVINSSEQ=ATATCC	TR:VR	38:4	13:0
chr14	36006868	r_103	A	<DEL>	.	PASS	END=43862663;SVTYPE=DEL;SVLEN=-7855795;SVINSLEN=69;SVINSSEQ=CTGTTTGTTCCTCCCTCTCTTTTTAACAGAAGTGTTTGGACCATTTACATTTAATATAAATGTTTATGT	TR:VR	64:6	45:0
chr17	27317984	r_142	T	<DEL>	.	Too_low_VAF	END=39737043;SVTYPE=DEL;SVLEN=-12419059;SVINSLEN=3;SVINSSEQ=GCC	TR:VR	529:3	71:0
chr3	111408705	i_614	T	<INS>	.	PASS	END=111408705;SVTYPE=INS;SVINSLEN=159;SVINSSEQ=AAAAAATACACATTGTGATCTCATTGTTCAATTACCACCTATGAGTGAGAATACACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	TR:VR	45:9	31:0
chr8	17691563	r_317	G	<DUP>	.	PASS	END=18082384;SVTYPE=DUP;SVLEN=390821	TR:VR	56:4	47:0
chr14	36166876	r_104	G	<DUP>	.	PASS	END=37994727;SVTYPE=DUP;SVLEN=1827851	TR:VR	47:3	50:0
chr16	15335372	i_239	C	<INS>	.	PASS	END=15335372;SVTYPE=INS;SVINSLEN=474;SVINSSEQ=ACAAGTCACACCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGTATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	TR:VR	34:5	29:0
chr3	11265965	r_261_0	T	T]chr3:44825596]	.	PASS	SVTYPE=BND;MATEID=r_261_1	TR:VR	73:9	53:0
chr3	44825596	r_261_1	G	G]chr3:11265965]	.	PASS	SVTYPE=BND;MATEID=r_261_0	TR:VR	73:9	53:0
chr5	47146969	i_687	G	<INS>	.	PASS	END=47146969;SVTYPE=INS;SVINSLEN=343;SVINSSEQ=GATATTTCCAGTGATTTGAGGCCGAAGAAGGAAAGGAAATACCTTCAGATACAAACTGGACAGAAGCATTCTCAGGAACTGCTTTGTGATGTGTGCATTCAACTCACGGACTTGAACCTTCTTTTTTGAGAGAGCAGTTTTGAAAGAGTCTTTTTGTAGTATCTGAAATTGGATATTTAGAGCAACTTGAGGACTATGATGGAAAAGGGAATATCTTCACATACAAATTGGACAGAAGCATTCTAAGAAACTTCTTCATGATATGTGAATTCACCTCTTGGAGTGGAAACATTCTTTTGATACAGCAGTGTTGAGGCAGTCTTTTTATGAGGATCTGCCAGTT	TR:VR	46:4	35:0
chr1	40779824	r_4	G	<DUP>	.	PASS	END=41107729;SVTYPE=DUP;SVLEN=327905;SVINSLEN=1;SVINSSEQ=A	TR:VR	59:6	49:0
chr17_GL000205v2_random	18493	d_427	G	<INS>	.	Too_small_size	END=18493;SVTYPE=INS;SVINSLEN=47;SVINSSEQ=CAGTGTTCTGGAATCTTATCTGACGGACAAATATTCAGACTAGGGGA	TR:VR	100:10	83:1
chr21	31035433	i_556	T	<INS>	.	PASS	END=31035433;SVTYPE=INS;SVINSLEN=970;SVINSSEQ=TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCGCATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCGA	TR:VR	36:19	27:0
chr3	11265985	r_262_0	G	[chr3:90645603[A	.	PASS	SVTYPE=BND;MATEID=r_262_1	TR:VR	148:13	113:0
chr3	90645603	r_262_1	A	[chr3:11265985[A	.	PASS	SVTYPE=BND;MATEID=r_262_0	TR:VR	148:13	113:0
chr5	47148879	i_688	G	<INS>	.	PASS	END=47148879;SVTYPE=INS;SVINSLEN=339;SVINSSEQ=GTAATATCGTCACTTAAACACTAGACAGAAGCATTCTCTGAAACTCCTTTGTGATGTGTGTGTTCAATTCACATCGTTGAACCTTTCTTTTGATAGAGCAGTGTTGAAACATACTTTTTGTAGAATCTGCAAGTGTTCATTTCTGAGTACTTTTTACGTATGTTGGAAAAAGTGATATCTTCACCTGAAAAATAGACAGAAGCATTCTCAGAAACTGCTTCGTAACGTGTGCATTCAACTCACAGAGTTGAACCTTCCTTTTGAGAGAGCGGTTTTGAAACAGTCTTTTTGTAGTATCTGCAAGTGGATATTTGCAGTGATTTGAGGCCGAAGAAGGAA	TR:VR	39:4	30:0
chr17	30372209	r_144_0	T	[chr17:39715006[G	.	Too_low_VAF	SVTYPE=BND;MATEID=r_144_1	TR:VR	525:4	48:0
chr17	39715006	r_144_1	G	[chr17:30372209[G	.	Too_low_VAF	SVTYPE=BND;MATEID=r_144_0	TR:VR	525:4	48:0
chr2	87426244	d_496	C	<DEL>	.	Too_low_VAF	END=87426280;SVTYPE=DEL;SVLEN=-36;SVINSLEN=35;SVINSSEQ=AAACCAGACAAGCCAGCCAGCCAAGCCAGCCAGCC	TR:VR	176:3	170:0
chr4	181123129	d_731	C	<DEL>	.	PASS	END=181125402;SVTYPE=DEL;SVLEN=-2273;SVINSLEN=1;SVINSSEQ=C	TR:VR	37:13	32:0
chr17	30379598	r_145	C	<DEL>	.	PASS	END=30391571;SVTYPE=DEL;SVLEN=-11973;SVINSLEN=22;SVINSSEQ=TCTTACTGATAACCCACCCTCC	TR:VR	52:11	26:0
chr3	11494581	d_676	T	<DEL>	.	PASS	END=11496463;SVTYPE=DEL;SVLEN=-1882	TR:VR	36:9	26:0
chr1	45957934	r_6_0	G	G]chr6:136980962]	.	PASS	SVTYPE=BND;MATEID=r_6_1	TR:VR	53:4	42:0
chr6	136980962	r_6_1	T	T]chr1:45957934]	.	PASS	SVTYPE=BND;MATEID=r_6_0	TR:VR	53:4	42:0
chr14	48073806	r_105	A	<DUP>	.	Too_low_VAF	END=63258992;SVTYPE=DUP;SVLEN=15185186;SVINSLEN=19;SVINSSEQ=AACATTTAATGTTAGATGT	TR:VR	75:3	62:0
chr17	30394496	r_146_0	T	TCTAGCTTTTATGTGAATATATTTCCTTTTCTACAATAGGGCTGATATCGCTCCAAATATCCACTTGCAGATTCTACAAAAACAGTGTTTCATAACTGCTCCATCAAAATAAAGAATCAACACTGTGAGGTGA[chr21:7255376[	.	PASS	SVTYPE=BND;MATEID=r_146_1;SVINSLEN=132;SVINSSEQ=CTAGCTTTTATGTGAATATATTTCCTTTTCTACAATAGGGCTGATATCGCTCCAAATATCCACTTGCAGATTCTACAAAAACAGTGTTTCATAACTGCTCCATCAAAATAAAGAATCAACACTGTGAGGTGA	TR:VR	182:12	128:0
chr21	7255376	r_146_1	A	]chr17:30394496]TCACCTCACAGTGTTGATTCTTTATTTTGATGGAGCAGTTATGAAACACTGTTTTTGTAGAATCTGCAAGTGGATATTTGGAGCGATATCAGCCCTATTGTAGAAAAGGAAATATATTCACATAAAAGCTAGA	.	PASS	SVTYPE=BND;MATEID=r_146_0;SVINSLEN=132;SVINSSEQ=TCACCTCACAGTGTTGATTCTTTATTTTGATGGAGCAGTTATGAAACACTGTTTTTGTAGAATCTGCAAGTGGATATTTGGAGCGATATCAGCCCTATTGTAGAAAAGGAAATATATTCACATAAAAGCTAG	TR:VR	182:12	128:0
chr2	90394257	i_456	T	<INS>	.	Too_low_VAF	END=90394257;SVTYPE=INS;SVINSLEN=961;SVINSSEQ=CATCATCGAATAAAATCAAATGGAATAATCGAATGTACTCGAATGGAATCATCAAATGGATTTGAGAGGAATCATCATCGAATGGAATTGAACAGAATCATCAAATGGACTCGAATGGAATCCTCATTGAATGGAATCGAATGGAATCATTGAATGGAGTCGAATGGAATCATCATCAAATGGAATCGAATGGAATCATTGAATATCAACGAATGGAATCATCATGGAATGCAGTCGAATGGAATCATCAAATGAACTCGAATGCAATCATCATAGAATGGAATCGAATGGAATCTTTGAATGGACCTGAATGGAATCATCATCGATTGCAAACGAATGGAATCATCATCAAATGGAATCACATGGAATCATCAAATGGAAAAGAATTGAATAATCATAGAAAGGAATTGAACAGAATCATCGAATGTAACCGAATGGAATCATCATCGAATGGAATCGAATGGAATCATCATTGAATGCAATTGAATGGAATCATCATCGAATGGAATCGAATGGAATCGTCATCGAATGGAATCGAATGGAATCATCATCGAATGCAACCAAATAGAATCATCAAATGGACTCGAAAGGAATCATCGAATGGACTCGAATGGAGTTGTCATCGAATGGAATCAAATGGAATCATCGAACGGAATTGAATCGAATCATCATTGAATGAAATCAAATGGAATCATCGAATGGACTCGAATGGAAGCAATATCAAATGGAATCGAAAGGAATCATGGAATGCATTCAAAGGGAATAATCAAATGGACTCAAATGGAATCAACATCAAGTGGAATCGAAAGGAATCATCGAATGGACTCGAATGGAATCATCATCGAATGGAATCGAATGGAATCATCGAATGGACTTGAATGGAATCACTATCTAATGGAACCGAATGGAATCATCATGGAATGGAACCGGAAGGAGTCATCATCAAATGGAATCCAAAGGA	TR:VR	542:3	396:1
chr3	11497483	d_677	C	<DEL>	.	PASS	END=11497552;SVTYPE=DEL;SVLEN=-69	TR:VR	34:9	24:0
chr5	50249172	i_689	T	<INS>	.	PASS	END=50249177;SVTYPE=INS;SVINSLEN=322;SVINSSEQ=CATGTCCTTTGTAGGGACATGGATGAAACTGGAAACCATCATTCTCAGCAAACTATCACAAGCACAAAAAACCAAACACCGCATGTTCTCACTCAAGGTCGGAATTGAACAATGAGAACACATGGACACAGGATGGGGAACATCACACTCCAAGACTGTTGTGGGGTGGGGGGAGGGGTGAGGGATAGCATTAGGAGATATACCTAATGCTAAATCACGAGTTAATGGGTGCAGCACTCCAACATGGCACATGTATACATATGTAACAAACCTGCACATTGTGCGCATGTACCCTAAAACTTAAAGTATAATAATAATAAAA	TR:VR	43:3	20:0
chr12	17024059	i_118	C	<INS>	.	PASS	END=17024059;SVTYPE=INS;SVINSLEN=301;SVINSSEQ=TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGTATATCTCCCAATGCTATCCCTCCCCCCTCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGT	TR:VR	24:8	18:0
chr14	48746509	r_106	G	<DEL>	.	PASS	END=48827505;SVTYPE=DEL;SVLEN=-80996	TR:VR	63:6	49:0
chr2	112098466	r_201_0	C	[chr2:177312800[C	.	PASS	SVTYPE=BND;MATEID=r_201_1	TR:VR	66:10	52:0
chr2	177312800	r_201_1	C	[chr2:112098466[C	.	PASS	SVTYPE=BND;MATEID=r_201_0	TR:VR	66:10	52:0
chr2	90395195	d_534	A	<INS>	.	Too_low_VAF	END=90395328;SVTYPE=INS;SVINSLEN=137;SVINSSEQ=TCACCATCGGAATGAAATCAAATGGAATCACCATCGAATGGAATGTTATGAAATTATCATTGGACTCGAAGGGAATCATCATCGAATGGAATCGAATGGAATCATTGAATGAAATGGAAAGGAATCAACATCGAATG	TR:VR	558:8	398:1
chr1	45958523	r_8_0	T	[chr1:46265164[G	.	PASS	SVTYPE=BND;MATEID=r_8_1	TR:VR	65:4	39:0
chr1	46265164	r_8_1	G	[chr1:45958523[G	.	PASS	SVTYPE=BND;MATEID=r_8_0	TR:VR	65:4	39:0
chr14	49809071	r_107	T	<DUP>	.	PASS	END=50098416;SVTYPE=DUP;SVLEN=289345	TR:VR	64:7	41:0
chr2	112099172	r_202	A	<DEL>	.	PASS	END=175004016;SVTYPE=DEL;SVLEN=-62904844	TR:VR	81:10	53:0
chr3	121340829	r_266	A	<DUP>	.	PASS	END=121535269;SVTYPE=DUP;SVLEN=194440	TR:VR	84:6	64:0
chr7	57495630	i_765	G	<INS>	.	PASS	END=57495630;SVTYPE=INS;SVINSLEN=170;SVINSSEQ=GAATCGTCATTGAATGGAATCAAATGGAATCAACATCCAATGGAATCGAATGGAATCCTCATCAAATGGACTCGAATGGAATCATCGACTGGAATCGAATGGAATAATCATCGAATGGACTCGAGTGGAATCATCATCGACTGGAATCGAATGGAATAATCATCGAATGG	TR:VR	46:4	37:1
chr1	45958791	r_9_0	A	A[chr6:137115332[	.	PASS	SVTYPE=BND;MATEID=r_9_1	TR:VR	66:4	38:0
chr6	137115332	r_9_1	G	]chr1:45958791]G	.	PASS	SVTYPE=BND;MATEID=r_9_0	TR:VR	66:4	38:0
chr17	35886595	i_282	A	<INS>	.	PASS	END=35886613;SVTYPE=INS;SVINSLEN=149;SVINSSEQ=CCCAAACAGAAAAACAACAAACCCACATATGTATGTAGTAATACACACACATTCGGAAACACATTTAAATCTATACCTTTTTTATCTACCTTGAAAACCATGAATCCATCTTAACATTTCAAAGTTCATTCTGATTTTCTCCTGTTTCA	TR:VR	28:3	28:0
chr2	112102880	r_203_0	G	[chr2:174983861[C	.	PASS	SVTYPE=BND;MATEID=r_203_1	TR:VR	77:11	48:0
chr2	174983861	r_203_1	C	[chr2:112102880[C	.	PASS	SVTYPE=BND;MATEID=r_203_0	TR:VR	77:11	48:0
chr3	132136999	r_267	C	<DUP>	.	PASS	END=132414548;SVTYPE=DUP;SVLEN=277549	TR:VR	85:10	59:0
chr1	45959127	r_10	A	<DUP>	.	PASS	END=45960585;SVTYPE=DUP;SVLEN=1458	TR:VR	32:4	17:0
chr14	66261680	r_108_0	T	[chr2:169764125[T	.	PASS	SVTYPE=BND;MATEID=r_108_1	TR:VR	92:9	54:0
chr2	169764125	r_108_1	T	[chr14:66261680[T	.	PASS	SVTYPE=BND;MATEID=r_108_0	TR:VR	92:9	54:0
chr17	36159724	r_147_0	G	[chr17:37890226[G	.	Too_low_VAF	SVTYPE=BND;MATEID=r_147_1	TR:VR	63:3	68:1
chr17	37890226	r_147_1	G	[chr17:36159724[G	.	Too_low_VAF	SVTYPE=BND;MATEID=r_147_0	TR:VR	63:3	68:1
chr2	112103627	r_204	G	<DEL>	.	PASS	END=174999113;SVTYPE=DEL;SVLEN=-62895486;SVINSLEN=4;SVINSSEQ=CGTG	TR:VR	79:12	48:0
chr4	18219971	i_635	T	<INS>	.	PASS	END=18219972;SVTYPE=INS;SVINSLEN=192;SVINSSEQ=TGTTTCCTGACCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTTGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCGGAGTAGCTGGGACTACAGGCACCCACCACCAAGCCTGGCTAATTTTG	TR:VR	36:3	37:0
chr1	45959310	r_11_0	G	G[chr6:137116027[	.	PASS	SVTYPE=BND;MATEID=r_11_1	TR:VR	67:4	40:0
chr6	137116027	r_11_1	T	]chr1:45959310]T	.	PASS	SVTYPE=BND;MATEID=r_11_0	TR:VR	67:4	40:0
chr14	66261950	r_109_0	T	T[chr7:29622284[	.	PASS	SVTYPE=BND;MATEID=r_109_1	TR:VR	80:9	59:0
chr7	29622284	r_109_1	C	]chr14:66261950]C	.	PASS	SVTYPE=BND;MATEID=r_109_0	TR:VR	80:9	59:0
chr14_GL000225v1_random	30292	r_114_0	G	[chrY:11309494[C	.	Too_low_VAF	SVTYPE=BND;MATEID=r_114_1	TR:VR	700:3	674:1
chrY	11309494	r_114_1	C	[chr14_GL000225v1_random:30292[C	.	Too_low_VAF	SVTYPE=BND;MATEID=r_114_0	TR:VR	700:3	674:1
chr2	118111968	r_205	A	<DUP>	.	PASS	END=118191115;SVTYPE=DUP;SVLEN=79147	TR:VR	61:5	57:0
chr1	45991596	r_12_0	G	[chr6:136980126[A	.	PASS	SVTYPE=BND;MATEID=r_12_1	TR:VR	61:5	50:0
chr6	136980126	r_12_1	A	[chr1:45991596[A	.	PASS	SVTYPE=BND;MATEID=r_12_0	TR:VR	61:5	50:0
chr14	67848251	r_110	T	<DUP>	.	PASS	END=68272733;SVTYPE=DUP;SVLEN=424482	TR:VR	74:9	53:0
chr17	39275085	r_148_0	C	[chr17:39277265[G	.	PASS	SVTYPE=BND;MATEID=r_148_1	TR:VR	44:12	33:0
chr17	39277265	r_148_1	G	[chr17:39275085[G	.	PASS	SVTYPE=BND;MATEID=r_148_0	TR:VR	44:12	33:0
chr19	18971129	r_183_0	G	]chr6:1751218]T	.	PASS	SVTYPE=BND;MATEID=r_183_1	TR:VR	55:3	66:0
chr6	1751218	r_183_1	T	T[chr19:18971129[	.	PASS	SVTYPE=BND;MATEID=r_183_0	TR:VR	55:3	66:0
chr3	148368471	d_684	C	<DEL>	.	PASS	END=148372087;SVTYPE=DEL;SVLEN=-3616	TR:VR	48:3	37:0
chrY	11304670	d_1026	T	<DEL>	.	Too_low_VAF	END=11304879;SVTYPE=DEL;SVLEN=-209;SVINSLEN=4;SVINSSEQ=GGGT	TR:VR	339:7	303:1
chr1	149849797	r_21_0	C	[chr14:19854358[T	.	PASS	SVTYPE=BND;MATEID=r_21_1	TR:VR	98:14	52:0
chr14	19854358	r_21_1	T	[chr1:149849797[T	.	PASS	SVTYPE=BND;MATEID=r_21_0	TR:VR	98:14	52:0
chr14	68560307	r_111_0	T	]chr16:11715331]G	.	PASS	SVTYPE=BND;MATEID=r_111_1	TR:VR	80:6	45:0
chr16	11715331	r_111_1	G	G[chr14:68560307[	.	PASS	SVTYPE=BND;MATEID=r_111_0	TR:VR	80:6	45:0
chr3	153529644	r_268	T	<DUP>	.	PASS	END=153678004;SVTYPE=DUP;SVLEN=148360	TR:VR	81:10	50:0
chr5	103976773	i_693	T	<INS>	.	PASS	END=103976773;SVTYPE=INS;SVINSLEN=534;SVINSSEQ=AGAAAGATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	TR:VR	40:9	19:0
chr1	149850143	r_22_0	C	CTGGTGTTTTCA]chr14:20463083]	.	PASS	SVTYPE=BND;MATEID=r_22_1;SVINSLEN=11;SVINSSEQ=TGGTGTTTTCA	TR:VR	77:14	37:0
chr14	20463083	r_22_1	T	TTGAAAACACCA]chr1:149850143]	.	PASS	SVTYPE=BND;MATEID=r_22_0;SVINSLEN=11;SVINSSEQ=TGAAAACACCA	TR:VR	77:14	37:0
chr14	68847084	r_112_0	C	C]chr14_GL000194v1_random:122165]	.	PASS	SVTYPE=BND;MATEID=r_112_1	TR:VR	96:8	74:0
chr14_GL000194v1_random	122165	r_112_1	A	A]chr14:68847084]	.	PASS	SVTYPE=BND;MATEID=r_112_0	TR:VR	96:8	74:0
chr17	39380248	r_150_0	C	C]chr17:39712409]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_150_1	TR:VR	535:3	46:0
chr17	39712409	r_150_1	T	T]chr17:39380248]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_150_0	TR:VR	535:3	46:0
chr1	150004279	i_33	A	<INS>	.	PASS	END=150004279;SVTYPE=INS;SVINSLEN=153;SVINSSEQ=TATTTATATTAAATTTCCTTTGTTGTTGTTATCGTCATGTGAAGCTATGAGAAAAGCTTGGGAAGCATATGCTTCAAAATGTAGTGTTTAGAAGGCAGAACCCCTGTTGAGAGCGGGGAAAAGAATTTATTTATTTATTTATTTATCTATGGC	TR:VR	35:5	24:0
chr1	51291422	r_13	C	<DUP>	.	PASS	END=51720436;SVTYPE=DUP;SVLEN=429014	TR:VR	69:6	50:0
chr11	19836563	r_41	C	<DUP>	.	PASS	END=20275674;SVTYPE=DUP;SVLEN=439111	TR:VR	58:8	54:0
chr19	22147737	r_184	A	<DEL>	.	PASS	END=22153608;SVTYPE=DEL;SVLEN=-5871	TR:VR	39:8	23:0
chr3	177534713	d_685	C	<DEL>	.	Too_small_size	END=177534758;SVTYPE=DEL;SVLEN=-45	TR:VR	38:4	25:0
chr1	52435306	i_11	C	<INS>	.	Too_small_size	END=52435306;SVTYPE=INS;SVINSLEN=37;SVINSSEQ=CATTAAAGATACTGCTATCATCAGTCAAGACTAACAC	TR:VR	30:5	28:0
chr11	35737877	r_42	G	<DUP>	.	PASS	END=35978744;SVTYPE=DUP;SVLEN=240867	TR:VR	56:3	40:0
chr17	39601118	r_152_0	A	[chr17:39601119[GTATCC	.	PASS	SVTYPE=BND;MATEID=r_152_1;SVINSLEN=5;SVINSSEQ=GTATC	TR:VR	145:108	20:0
chr17	39601119	r_152_1	C	[chr17:39601118[GATACC	.	PASS	SVTYPE=BND;MATEID=r_152_0;SVINSLEN=5;SVINSSEQ=GATAC	TR:VR	145:108	20:0
chr19	22416050	r_185_0	A	A[chr6:61624731[	.	PASS	SVTYPE=BND;MATEID=r_185_1	TR:VR	62:7	34:0
chr6	61624731	r_185_1	G	]chr19:22416050]G	.	PASS	SVTYPE=BND;MATEID=r_185_0	TR:VR	62:7	34:0
chr2	26333431	r_194_0	A	]chr4:89723827]AGGAGGGTGGGGAAGCAC	.	PASS	SVTYPE=BND;MATEID=r_194_1;SVINSLEN=17;SVINSSEQ=AGGAGGGTGGGGAAGCA	TR:VR	73:4	58:1
chr4	89723827	r_194_1	C	CTGCTTCCCCACCCTCCT[chr2:26333431[	.	PASS	SVTYPE=BND;MATEID=r_194_0;SVINSLEN=17;SVINSSEQ=TGCTTCCCCACCCTCCT	TR:VR	73:4	58:1
chr5	106901142	r_291_0	C	C[chr8:128749816[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_291_1	TR:VR	88:3	43:0
chr8	128749816	r_291_1	T	]chr5:106901142]T	.	Too_low_VAF	SVTYPE=BND;MATEID=r_291_0	TR:VR	88:3	43:0
chr8	43242195	i_838	C	<INS>	.	Too_low_VAF;Too_small_size	END=43242195;SVTYPE=INS;SVINSLEN=47;SVINSSEQ=AAAAGTACCCAAAACATGTAATTATATACTGTACATAAAATATCAAA	TR:VR	185:3	138:0
chr1	53154017	r_14	C	<DUP>	.	PASS	END=53265354;SVTYPE=DUP;SVLEN=111337	TR:VR	92:13	62:0
chr13	18214214	r_89_0	A	[chr21:10360053[AACATATATATTGTATATAAAATATATAATATATATTACG	.	Too_low_VAF	SVTYPE=BND;MATEID=r_89_1;SVINSLEN=39;SVINSSEQ=AACATATATATTGTATATAAAATATATAATATATATTAC	TR:VR	330:4	323:1
chr21	10360053	r_89_1	G	[chr13:18214214[GTAATATATATTATATATTTTATATACAATATATATGTTG	.	Too_low_VAF	SVTYPE=BND;MATEID=r_89_0;SVINSLEN=39;SVINSSEQ=GTAATATATATTATATATTTTATATACAATATATATGTT	TR:VR	330:4	323:1
chr2	286938	r_190_0	C	C[chr20:36694815[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_190_1	TR:VR	76:3	58:0
chr20	36694815	r_190_1	T	]chr2:286938]T	.	Too_low_VAF	SVTYPE=BND;MATEID=r_190_0	TR:VR	76:3	58:0
chr3	183202248	r_269	A	<DUP>	.	PASS	END=183462444;SVTYPE=DUP;SVLEN=260196	TR:VR	79:6	44:0
chr20	33885806	r_239_0	T	[chr20:34095965[T	.	PASS	SVTYPE=BND;MATEID=r_239_1	TR:VR	97:9	60:0
chr20	34095965	r_239_1	T	[chr20:33885806[T	.	PASS	SVTYPE=BND;MATEID=r_239_0	TR:VR	97:9	60:0
chr1	53283749	i_13	C	<INS>	.	PASS	END=53283749;SVTYPE=INS;SVINSLEN=964;SVINSSEQ=CACTTACTTTACTGCGATACCGGGCCACTTACTTACTTACTACATACCCGGTCACACTTACTTACTACATACCCGGCCACTTACTACCTACTACATACCCGGGCCACTTACTTACCTACTACATACCCGGGTCGCTTTTACTTACCTACTACATACCCGGGCCGCTAATTTCCCTACCTACTACATACCCGGGACGCCTTACTGTTTACTACATACCCGGGCCGCTTACTTACCTACTACATACCCGGGCCGCGCTACTTACCTACTACATACCCGGGCCGCCTACTTACCTACTACATACCCGCCGCGCGTTTACTTACCTACTACATACCCGGGCCGCCATTTACCTACTACATGCCTGGCCGCTTACTTACCTACTACATACCCGGTCTTCCTTACTTACCTACTACATACCCGGGCCGCTTTACTTACCTACTACATACCCGGGCCGCTACTTACCTCACTACATACCCGGGCCGCTTACTTACCTCACTACATACCCGGGCCGCCATACTTACCTACTACACCGGGCCGCCACTTACCCCACTACATACCCCCGTGCCGCCATACCTTACCTACTACATACCCGTCGCCGCTACTTACCTACTACATACCCGGGCCGCTACTTACCTACTACACACCCGCCCATTACCCACCTGCCGTCACCCGGGCCGCTACTTACCTACATACCCGGGCCGCTTTACTTACCTACTACATACCCGGGCCGCATGCCGGACTTACCTACTACATACCGGCCGGCTACTTACCTACCCACATACCCGGGCCGCTACTTCACCTACTACATACCCGGGCCGCGCTACTTACCTACTACATACCCGGCCGCTTACTTACCTACTACATACCCGGTCGCCATTTACCTACTACATACCCGGGCCGCTTTACTTACCTACTACATACCCGGGTCGCTTACTTACCTACTACATACCCGACGTGGCTCGCTTAC	TR:VR	40:3	35:1
chr20	34057713	r_240_0	A	ACAGCGCCCACCCCCCTTCCTCACTAAGTGCCGGGGTCACAGTGCCCACCCCTTCCTAAGTGCCGGGGTCACAGCGCCCACCCCTTCCTAAGTGCTGGGGTCACAGTGCCTGCCGGCTCTGCCGGGC[chr5:841085[	.	PASS	SVTYPE=BND;MATEID=r_240_1;SVINSLEN=126;SVINSSEQ=CAGCGCCCACCCCCCTTCCTCACTAAGTGCCGGGGTCACAGTGCCCACCCCTTCCTAAGTGCCGGGGTCACAGCGCCCACCCCTTCCTAAGTGCTGGGGTCACAGTGCCTGCCGGCTCTGCCGGGC	TR:VR	92:9	48:0
chr5	841085	r_240_1	C	]chr20:34057713]GCCCGGCAGAGCCGGCAGGCACTGTGACCCCAGCACTTAGGAAGGGGTGGGCGCTGTGACCCCGGCACTTAGGAAGGGGTGGGCACTGTGACCCCGGCACTTAGTGAGGAAGGGGGGTGGGCGCTGC	.	PASS	SVTYPE=BND;MATEID=r_240_0;SVINSLEN=126;SVINSSEQ=GCCCGGCAGAGCCGGCAGGCACTGTGACCCCAGCACTTAGGAAGGGGTGGGCGCTGTGACCCCGGCACTTAGGAAGGGGTGGGCACTGTGACCCCGGCACTTAGTGAGGAAGGGGGGTGGGCGCTG	TR:VR	92:9	48:0
chr21	5309183	d_608	C	<INS>	.	Too_low_VAF	END=5309276;SVTYPE=INS;SVINSLEN=93;SVINSSEQ=AAAGTTGAGCCTTTCTTTTGATTGAACAGTTTGGAAAATCTCTTTTTGTAGAATCTGCATGTGGACATTTGGAGCGCTTTCAGGCCTTTGGTG	TR:VR	134:4	111:0
chr1	174981623	r_23	T	<DUP>	.	PASS	END=175223993;SVTYPE=DUP;SVLEN=242370	TR:VR	62:8	53:0
chr20	34155945	r_241_0	A	AACCCCACC[chr5:841488[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_241_1;SVINSLEN=8;SVINSSEQ=ACCCCACC	TR:VR	98:3	56:0
chr5	841488	r_241_1	C	]chr20:34155945]GGTGGGGTC	.	Too_low_VAF	SVTYPE=BND;MATEID=r_241_0;SVINSLEN=8;SVINSSEQ=GGTGGGGT	TR:VR	98:3	56:0
chr22	23856326	r_254_0	A	AAAAAAA[chr3:42334544[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_254_1;SVINSLEN=6;SVINSSEQ=AAAAAA	TR:VR	78:3	57:0
chr3	42334544	r_254_1	A	]chr22:23856326]TTTTTTA	.	Too_low_VAF	SVTYPE=BND;MATEID=r_254_0;SVINSLEN=6;SVINSSEQ=TTTTTT	TR:VR	78:3	57:0
chr3	185468837	r_271_0	T	[chrX:120469240[G	.	PASS	SVTYPE=BND;MATEID=r_271_1	TR:VR	75:6	48:0
chrX	120469240	r_271_1	G	[chr3:185468837[G	.	PASS	SVTYPE=BND;MATEID=r_271_0	TR:VR	75:6	48:0
chr8	43458243	i_842	T	<INS>	.	PASS	END=43458243;SVTYPE=INS;SVINSLEN=134;SVINSSEQ=AACTTAGAGTATAATAAAAAAAAAAAAAAAAAGAATTGTAAAAAAAAAAAAATTATAAATAAAACAAAGAAGAATATGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	TR:VR	21:4	27:0
chr20	34231415	r_242_0	T	TC[chr9:70016958[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_242_1;SVINSLEN=1;SVINSSEQ=C	TR:VR	63:3	63:0
chr9	70016958	r_242_1	T	]chr20:34231415]GT	.	Too_low_VAF	SVTYPE=BND;MATEID=r_242_0;SVINSLEN=1;SVINSSEQ=G	TR:VR	63:3	63:0
chr7	6231022	r_302	C	<DUP>	.	PASS	END=8565141;SVTYPE=DUP;SVLEN=2334119	TR:VR	91:8	48:0
chr12	40675296	d_127	G	<DEL>	.	PASS	END=40675444;SVTYPE=DEL;SVLEN=-148;SVINSLEN=3;SVINSSEQ=TTG	TR:VR	33:3	27:0
chr19	248091	i_333	T	<INS>	.	PASS	END=248091;SVTYPE=INS;SVINSLEN=327;SVINSSEQ=CTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCGATCTCGGCTCAATGCAAGCTCCACTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAAGAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTATAGGCGTGAGCCACCGCGCCCATCCGATTGGGGCACC	TR:VR	41:3	45:0
chr4	189281887	r_282	T	<DEL>	.	PASS	END=189282424;SVTYPE=DEL;SVLEN=-537	TR:VR	40:3	32:0
chr5	68295268	d_770	G	<DEL>	.	Too_small_size	END=68295308;SVTYPE=DEL;SVLEN=-40;SVINSLEN=1;SVINSSEQ=C	TR:VR	27:8	24:0
chr12	40675445	r_55_0	A	ATA]chr12:40725149]	.	PASS	SVTYPE=BND;MATEID=r_55_1;SVINSLEN=2;SVINSSEQ=TA	TR:VR	67:5	53:0
chr12	40725149	r_55_1	C	CTA]chr12:40675445]	.	PASS	SVTYPE=BND;MATEID=r_55_0;SVINSLEN=2;SVINSSEQ=TA	TR:VR	67:5	53:0
chr20	38049896	r_243	G	<DUP>	.	Too_low_VAF	END=39202061;SVTYPE=DUP;SVLEN=1152165	TR:VR	87:3	43:0
chr22	29962843	r_255	C	<DUP>	.	Too_low_VAF	END=30290283;SVTYPE=DUP;SVLEN=327440	TR:VR	76:3	46:0
chr5	1099260	i_667	G	<INS>	.	PASS	END=1099261;SVTYPE=INS;SVINSLEN=324;SVINSSEQ=AGCCTGGCATCCAGCCTTCGGACCCGGTCCACCTCCTCCGGTGGGCCGGCGGGACCCAACCCGGTCCACCTCCTCTGGGGCACGGACATCAACCCAGCCCCGACCCAGTCCACCTCCTCCGGGGGACAGCAGGGCCCGACCCGGTCCACCTCCTCTGGGGCACGGACATCAACCCAGCCCCGACCCAGTCCACCTCCTCCGGGGGACAGCAGGGCCCGACCCGGTCCACCTCCTCTGGGGCACGGACATCAACCCAGCCCCGACCCAGTCCACCTCCTCCGGGGGGGACGGCAGGGCCCGACCCGGTCCACCTCCTCTGGGGCA	TR:VR	44:3	31:0
chr5	71552846	r_287_0	A	ACCGTGGGGAGAGGGAGACCGTGGGGAGAGGGAGAGGGAGAGG[chr6:33062526[	.	PASS	SVTYPE=BND;MATEID=r_287_1;SVINSLEN=42;SVINSSEQ=CCGTGGGGAGAGGGAGACCGTGGGGAGAGGGAGAGGGAGAGG	TR:VR	62:4	46:1
chr6	33062526	r_287_1	C	]chr5:71552846]CCTCTCCCTCTCCCTCTCCCCACGGTCTCCCTCTCCCCACGGC	.	PASS	SVTYPE=BND;MATEID=r_287_0;SVINSLEN=42;SVINSSEQ=CCTCTCCCTCTCCCTCTCCCCACGGTCTCCCTCTCCCCACGG	TR:VR	62:4	46:1
chr8	51912660	r_318	A	<DUP>	.	PASS	END=52262593;SVTYPE=DUP;SVLEN=349933	TR:VR	48:7	73:0
chr12	40675624	r_56	T	<DEL>	.	Too_low_VAF	END=40729246;SVTYPE=DEL;SVLEN=-53622	TR:VR	66:3	52:0
chr17	39687983	r_154_0	A	[chr17:39689406[A	.	PASS	SVTYPE=BND;MATEID=r_154_1	TR:VR	641:176	27:0
chr17	39689406	r_154_1	A	[chr17:39687983[A	.	PASS	SVTYPE=BND;MATEID=r_154_0	TR:VR	641:176	27:0
chr2	14102616	r_193_0	G	G[chr3:198122876[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_193_1	TR:VR	95:3	81:0
chr3	198122876	r_193_1	G	]chr2:14102616]G	.	Too_low_VAF	SVTYPE=BND;MATEID=r_193_0	TR:VR	95:3	81:0
chr5	112674169	i_694	T	<INS>	.	PASS	END=112674169;SVTYPE=INS;SVINSLEN=186;SVINSSEQ=TTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTTGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCGGAGTAGCTGGGACTACAGGCACCCACCACCAAGCCTGGCTAATTTTGTTTCCTGACTT	TR:VR	31:4	28:0
chr5	72305071	r_288	T	<DUP>	.	Too_low_VAF	END=72973444;SVTYPE=DUP;SVLEN=668373	TR:VR	65:3	39:0
chr1	69629760	i_18	G	<INS>	.	PASS	END=69629760;SVTYPE=INS;SVINSLEN=224;SVINSSEQ=GAAAGTGGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAG	TR:VR	43:12	24:0
chr12	40675755	d_128	T	<DEL>	.	PASS	END=40684343;SVTYPE=DEL;SVLEN=-8588;SVINSLEN=1;SVINSSEQ=A	TR:VR	39:7	37:0
chr13	51476369	r_90_0	T	[chr13:51477063[G	.	PASS	SVTYPE=BND;MATEID=r_90_1	TR:VR	40:8	29:0
chr13	51477063	r_90_1	G	[chr13:51476369[G	.	PASS	SVTYPE=BND;MATEID=r_90_0	TR:VR	40:8	29:0
chr14_GL000225v1_random	102992	i_198	G	<INS>	.	Too_low_VAF	END=102992;SVTYPE=INS;SVINSLEN=1569;SVINSSEQ=GGAATTTTGACAAATCTCTGCACTGATCACCCAGGTGATTCAACTCTTGTCTAGCATCTGCCTACAGGGTCGTATTTGGAAATATCTCTGCACTGATCATCCAAGGTGATGTAACTATTGTCTAAGCTCTGCCTACAGGGGCATTTTCACAGATTCCTGAACTGATAACAAAGGTGATGTAAATCTTCTCTAGGCTCTGCCAACAGGGGCGTTTTCAGCATATCCCTGAACTGATGACAAAGGTGATGTAACTCTTGCCTAGGCTCTGCCCACAGGATATTGTGACATATCTCTGCACTGATCACCCAGGTGATGCAAATCTTCACTATGCTCTGCCTACAGGGGCCATTGTGACTTATCTCCGCACTGATCACCCAGGTGATGTAATTCTTTTCTAGTCTCTGCCTACAGGGGATGTTGTGACATCATCTCTGCACGGATCACCCGTGGTTATGTAACTCTTGTCTAGGCTCTGCCTATGGGGGCATTGTGTCTTATCTCTGCACTGATTTCCTGGGAGATGTGACTCTTTTCTAAGTTCTGGCCAGGAGGGACTTATGGACATATCTCTGCACTGATCGCTGAGGGTGATATAAAACTTGTCTAGCGCTTGCCTACAGTCGGATTGCTGACTGTGTCTCCTGGGCAGGTGATCACCCAGGTGATGTAACTCTTGTCTAGGCTCTGCCTTGGGGGGGGTATTGTGAAATATCTCTGCACTGATAATCCAGGTGATGTAACTCTTCTGTAGGCTCTACCTACAGGGTCATTTTCACATATCACTGCACTGATCACCGAGGTGATGTAACTATTGTATAGGCTTCGCCGACAGGGGGCATTGAGACATATCTGTGCACTGATCACCCAGGTGATGTAACTCTTATGTTGGATTATGCCTATGGGGCATTGTGACATATTACTGCACTAATCATCCAGGTGATGGGACTTTGGTTCAGGCTCTGTGTATGGGAGCTTTTGTGTCATATCTCTGCCCTGATCACCCAGATGATGTAACTCTTGTATAGGCTCTGCCTACTGGAGGTATTTTTCAGCGTAGGACATATCTCCGCACTGATCATCCAGGTGATGTCACTTTTGTCAAGGATATGGCTACAGGGGCATTGTGACATGTCACTGCACTGATCACACAGCTGATGTTACTCTTGTCTAGGCTCTGGCTCACGGGGTCTTGTGACACATGTCTGCACTGATCACCCACCTGATGGAATCCTAGTCTAGGGCTCTGCCAAAAGGGGGCATTGCGACATAACTCTGCACTGATCACCCAGGTCATGCAGGACTCTTGTCCTAGGCACTGCCTACAGGTGCATTGTGACATATCTCTGCAGTGATCACAGGAGGTGAATGTACCTCGTTGTCTATCCTCTGCCTACTGGCGGCATTGTGGAATATCTCTGCACTGATCACCCAGGTGATGGACTTTTGTCTTGGATCTGACTATGGGGGCATAGTGACATATTTCTGCACTGATCACTCATATGATGTAACGTTTGTCTAAGCTGCGCCTACAGGGGAATTGTGACAGATATCCCTCCACTGATCACCCAG	TR:VR	464:5	495:0
chr22	33782841	i_581	G	<INS>	.	PASS	END=33782995;SVTYPE=INS;SVINSLEN=281;SVINSSEQ=GTGATGGAGCGAGACCCCATCACAAAATAAATAAATAAAATAAAATGAAATAAAATAAAATAAAATAAAATAAAATAAAAATTAACAGACTAGACTTCAGGGAGGTGTGGGGGGCAGGATGACTGGCCTTTTGGCTCTCGGCCGTCGGCATGGTCACTCCCCACACCTGTCCTATGTTCCAGACATACAGACCATCTCTCAGTTTCCCGCCCCCTACCCCGTGCTCTCTCTCACACCCTGGGCCTTATCATATTTAGCTTGCTCTGCAGGCATCTGTCCCG	TR:VR	27:5	24:0
chr5	7795502	d_760	G	<DEL>	.	PASS	END=7795557;SVTYPE=DEL;SVLEN=-55	TR:VR	33:5	33:0
chr11	48941824	i_99	C	<INS>	.	PASS	END=48941824;SVTYPE=INS;SVINSLEN=343;SVINSSEQ=ATCGCAAAGAAGTTTCTGAGAATGCTTCCGTCTAGTTTTTAAGTGAAGATATTCCGGTTTCCAACTGTAGGCCTCAAAGTGCTCCAAATATCCAGTTGCAGATTCTACAAAAAAAGTGTTTCAAAACTGCTCTATCAAAAGGTACATTCAACTCTGTGAGTTCAATGCAATCATCAGAAAAAGTTTCTGAGAATGCTTCTGTCTAGTTTTTATATGAAGATATTTCCTTTTCTACTGTAGTCCTCAAAGCGCTCCAAATATCCACTTGCGGATTCTACAAAAAGAGTGTTTCAAAACTGCTCTATCAAAAGGAAGGTTCAACTCTGTGATTCGAATGCACAGA	TR:VR	36:3	21:0
chr12	40781584	r_57	G	<DUP>	.	PASS	END=40782842;SVTYPE=DUP;SVLEN=1258	TR:VR	28:5	29:0
chr2	160113932	r_206	T	<DUP>	.	PASS	END=160247457;SVTYPE=DUP;SVLEN=133525	TR:VR	56:3	50:0
chr5	78154102	r_289	C	<DUP>	.	PASS	END=78407142;SVTYPE=DUP;SVLEN=253040	TR:VR	77:5	39:0
chr1	222806958	r_24	T	<DUP>	.	PASS	END=223128222;SVTYPE=DUP;SVLEN=321264	TR:VR	83:12	51:0
chr1	75064634	i_19	T	<INS>	.	PASS	END=75064634;SVTYPE=INS;SVINSLEN=273;SVINSSEQ=TCCTAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAGATATTAAAGTCTTTATTTGCCCCACCCCATTTTTATTTTCAGTAATACAGGGTAAAATGAGTAGGATTACTTGATCTGGCCATCTATGGCCATTTTATGGAATGACAAACTAAGTTCAATACTGATAGAGTTGTATTCTGTGTATACATATAATAGAGTATATACTGTGTGTATAAAAAATTCAAGCATATGGAAAAACTTATTTAATCCAGTAATAAACCT	TR:VR	41:6	23:0
chr17	39695297	r_156_0	G	G]chr17:39819825]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_156_1	TR:VR	914:4	37:0
chr17	39819825	r_156_1	C	C]chr17:39695297]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_156_0	TR:VR	914:4	37:0
chr2	161851711	r_207	A	<DUP>	.	PASS	END=161937484;SVTYPE=DUP;SVLEN=85773	TR:VR	57:10	45:0
chr2	3775631	d_476	G	<DEL>	.	PASS	END=3775783;SVTYPE=DEL;SVLEN=-152;SVINSLEN=5;SVINSSEQ=GCTGT	TR:VR	33:3	26:0
chr22	37791871	d_655	G	<DEL>	.	PASS	END=37796059;SVTYPE=DEL;SVLEN=-4188	TR:VR	26:5	31:0
chr5	841494	r_283_0	A	AGTGCAAAACCCCAAAGAGGTGGCAGTCTTACACTGCCGA]chr5:914219]	.	PASS	SVTYPE=BND;MATEID=r_283_1;SVINSLEN=39;SVINSSEQ=GTGCAAAACCCCAAAGAGGTGGCAGTCTTACACTGCCGA	TR:VR	102:9	54:0
chr5	914219	r_283_1	T	TTCGGCAGTGTAAGACTGCCACCTCTTTGGGGTTTTGCAC]chr5:841494]	.	PASS	SVTYPE=BND;MATEID=r_283_0;SVINSLEN=39;SVINSSEQ=TCGGCAGTGTAAGACTGCCACCTCTTTGGGGTTTTGCAC	TR:VR	102:9	54:0
chr8	72319528	i_845	A	<INS>	.	PASS	END=72319528;SVTYPE=INS;SVINSLEN=196;SVINSSEQ=ACTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTAATATTAGATCTGGACTCTCATCCAGCTACTTTATTGGGATAAAATGAATACTAAAGTCTCCAGGACAGGAACTTTGTTTCTTAAAATTTATCTTTGTAGTTTCATCACCTGTATTACCCTCCTAGGTCTGCTGTAATAAAGTACCACAAACTGGGTGGCTTTA	TR:VR	42:11	36:0
chr11	50440805	r_43_0	C	C[chr8:79171758[	.	Too_low_VAF	SVTYPE=BND;MATEID=r_43_1	TR:VR	61:3	61:0
chr8	79171758	r_43_1	T	]chr11:50440805]T	.	Too_low_VAF	SVTYPE=BND;MATEID=r_43_0	TR:VR	61:3	61:0
chr12	40782340	r_58	T	<DUP>	.	PASS	END=40783616;SVTYPE=DUP;SVLEN=1276	TR:VR	29:5	29:0
chr17	39698668	r_157_0	T	T]chr17:39750934]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_157_1	TR:VR	942:15	50:0
chr17	39750934	r_157_1	G	G]chr17:39698668]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_157_0	TR:VR	942:15	50:0
chr2	161873594	r_208	A	<DEL>	.	PASS	END=174064962;SVTYPE=DEL;SVLEN=-12191368	TR:VR	89:9	56:0
chr7	86111705	i_776	C	<INS>	.	PASS	END=86111705;SVTYPE=INS;SVINSLEN=1185;SVINSSEQ=ATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGATCTCAAA	TR:VR	33:4	17:0
chr1	85979102	r_16_0	A	[chr1:85987904[AACATACTCTTGTG	.	PASS	SVTYPE=BND;MATEID=r_16_1;SVINSLEN=13;SVINSSEQ=AACATACTCTTGT	TR:VR	49:3	37:0
chr1	85987904	r_16_1	G	[chr1:85979102[ACAAGAGTATGTTG	.	PASS	SVTYPE=BND;MATEID=r_16_0;SVINSLEN=13;SVINSSEQ=ACAAGAGTATGTT	TR:VR	49:3	37:0
chr12	40782342	r_59	A	<DEL>	.	PASS	END=40782848;SVTYPE=DEL;SVLEN=-506	TR:VR	28:5	29:0
chr13	72962021	r_91	G	<DUP>	.	PASS	END=73069801;SVTYPE=DUP;SVLEN=107780	TR:VR	71:11	32:0
chr2	161930717	r_209_0	C	[chr2:163118383[T	.	PASS	SVTYPE=BND;MATEID=r_209_1	TR:VR	68:8	49:0
chr2	163118383	r_209_1	T	[chr2:161930717[T	.	PASS	SVTYPE=BND;MATEID=r_209_0	TR:VR	68:8	49:0
chr1	232131586	r_25	G	<DUP>	.	PASS	END=232479672;SVTYPE=DUP;SVLEN=348086	TR:VR	78:6	42:0
chr1	86290651	r_17_0	A	AT]chr1:86397925]	.	PASS	SVTYPE=BND;MATEID=r_17_1;SVINSLEN=1;SVINSSEQ=T	TR:VR	74:4	57:0
chr1	86397925	r_17_1	T	TA]chr1:86290651]	.	PASS	SVTYPE=BND;MATEID=r_17_0;SVINSLEN=1;SVINSSEQ=A	TR:VR	74:4	57:0
chr13	73212654	r_92	G	<DUP>	.	PASS	END=73641898;SVTYPE=DUP;SVLEN=429244;SVINSLEN=14;SVINSSEQ=AATCGCTACAAAAA	TR:VR	61:4	58:0
chr14_GL000225v1_random	55194	d_202	T	<DEL>	.	Too_low_VAF	END=55964;SVTYPE=DEL;SVLEN=-770;SVINSLEN=21;SVINSSEQ=GAAAATTCCCGTGTAGACGGA	TR:VR	638:3	628:1
chr14_GL000225v1_random	96479	d_261	T	<DEL>	.	Too_low_VAF	END=97591;SVTYPE=DEL;SVLEN=-1112;SVINSLEN=21;SVINSSEQ=TCAGGGGGTTTTGTGACATAT	TR:VR	633:3	620:1
chr19	28392947	d_463	G	<DEL>	.	PASS	END=28393015;SVTYPE=DEL;SVLEN=-68	TR:VR	27:8	34:0
chr2	163122933	r_210_0	C	C]chr2:172881632]	.	PASS	SVTYPE=BND;MATEID=r_210_1	TR:VR	88:8	42:0
chr2	172881632	r_210_1	T	T]chr2:163122933]	.	PASS	SVTYPE=BND;MATEID=r_210_0	TR:VR	88:8	42:0
chr20	49633253	r_244_0	A	A]chr20:49635647]	.	PASS	SVTYPE=BND;MATEID=r_244_1	TR:VR	27:3	28:0
chr20	49635647	r_244_1	G	G]chr20:49633253]	.	PASS	SVTYPE=BND;MATEID=r_244_0	TR:VR	27:3	28:0
chr5	90457915	r_290_0	T	[chr5:91249616[A	.	PASS	SVTYPE=BND;MATEID=r_290_1	TR:VR	78:8	53:0
chr5	91249616	r_290_1	A	[chr5:90457915[A	.	PASS	SVTYPE=BND;MATEID=r_290_0	TR:VR	78:8	53:0
chr7	933908	d_822	G	<DEL>	.	PASS	END=933998;SVTYPE=DEL;SVLEN=-90;SVINSLEN=88;SVINSSEQ=AGAGCCGGGGGCCGGGGTCAGTGGTGCAGAGCCGGGGGCCGGGGTCAGTGGTGGTGCAGAGCCGGGGACCGGGGTCAGTGGTGGGTGC	TR:VR	25:4	20:0
chr12	41502882	r_60_0	A	[chr2:178031690[T	.	PASS	SVTYPE=BND;MATEID=r_60_1	TR:VR	52:7	44:0
chr2	178031690	r_60_1	T	[chr12:41502882[T	.	PASS	SVTYPE=BND;MATEID=r_60_0	TR:VR	52:7	44:0
chr19	28811511	d_464	A	<DEL>	.	Too_small_size	END=28811552;SVTYPE=DEL;SVLEN=-41;SVINSLEN=2;SVINSSEQ=CA	TR:VR	36:8	20:0
chr2	165991323	r_211	A	<DUP>	.	PASS	END=174229043;SVTYPE=DUP;SVLEN=8237720	TR:VR	106:10	43:0
chr2	4674693	d_478	G	<DEL>	.	PASS	END=4674799;SVTYPE=DEL;SVLEN=-106	TR:VR	40:8	21:0
chr2	91521863	d_550	C	<DEL>	.	Too_low_VAF;Too_small_size	END=91521880;SVTYPE=DEL;SVLEN=-17	TR:VR	144:3	140:1
chr5	90974489	d_771	T	<DEL>	.	PASS	END=90974827;SVTYPE=DEL;SVLEN=-338	TR:VR	53:9	20:0
chr9	72933971	r_324	T	<DUP>	.	PASS	END=73381217;SVTYPE=DUP;SVLEN=447246	TR:VR	58:6	51:0
chrX	144606566	i_966	G	<INS>	.	PASS	END=144606566;SVTYPE=INS;SVINSLEN=67;SVINSSEQ=AAAAGCATTTGGGCTCATAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	TR:VR	32:4	14:0
chr1	9061384	r_1_0	C	C]chr14:93246833]	.	PASS	SVTYPE=BND;MATEID=r_1_1	TR:VR	59:3	61:0
chr14	93246833	r_1_1	A	A]chr1:9061384]	.	PASS	SVTYPE=BND;MATEID=r_1_0	TR:VR	59:3	61:0
chr10	4496036	d_65	T	<DEL>	.	PASS	END=4496143;SVTYPE=DEL;SVLEN=-107	TR:VR	34:3	29:0
chr12	41516328	r_61_0	G	G]chr2:177970067]	.	PASS	SVTYPE=BND;MATEID=r_61_1	TR:VR	60:6	49:0
chr2	177970067	r_61_1	C	C]chr12:41516328]	.	PASS	SVTYPE=BND;MATEID=r_61_0	TR:VR	60:6	49:0
chr13	97083283	r_94	G	<DUP>	.	PASS	END=97253765;SVTYPE=DUP;SVLEN=170482	TR:VR	72:4	65:0
chr19	3244772	r_181_0	T	]chr6:61664179]C	.	PASS	SVTYPE=BND;MATEID=r_181_1	TR:VR	67:6	52:0
chr6	61664179	r_181_1	C	C[chr19:3244772[	.	PASS	SVTYPE=BND;MATEID=r_181_0	TR:VR	67:6	52:0
chr2	166274435	r_212_0	T	[chr2:166276632[C	.	PASS	SVTYPE=BND;MATEID=r_212_1	TR:VR	47:17	24:0
chr2	166276632	r_212_1	C	[chr2:166274435[C	.	PASS	SVTYPE=BND;MATEID=r_212_0	TR:VR	47:17	24:0
chr22	42519627	r_258	T	<DEL>	.	PASS	END=42542399;SVTYPE=DEL;SVLEN=-22772	TR:VR	39:5	41:0
chr3	195777660	i_626	C	<INS>	.	PASS	END=195777660;SVTYPE=INS;SVINSLEN=76;SVINSSEQ=CATACCTTCCACAGTCATACCTTCCACACCCATACCTTCCACAGTCATACCTTCCACACCCATACCTTCCACAGTC	TR:VR	22:5	17:0
chr4	25582440	r_274_0	G	G]chr4:27320297]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_274_1	TR:VR	64:3	48:0
chr4	27320297	r_274_1	A	A]chr4:25582440]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_274_0	TR:VR	64:3	48:0
chr8	9637089	r_314_0	A	[chr8:9669014[C	.	PASS	SVTYPE=BND;MATEID=r_314_1	TR:VR	57:6	54:0
chr8	9669014	r_314_1	C	[chr8:9637089[C	.	PASS	SVTYPE=BND;MATEID=r_314_0	TR:VR	57:6	54:0
chr9	74441361	i_867	T	<INS>	.	PASS	END=74441361;SVTYPE=INS;SVINSLEN=130;SVINSSEQ=AAGGCTTTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATACTTGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGTAATTGAACAATGAGATCACA	TR:VR	30:3	26:0
chr1	9061394	r_2_0	G	[chr14:93246136[A	.	PASS	SVTYPE=BND;MATEID=r_2_1	TR:VR	58:4	61:0
chr14	93246136	r_2_1	A	[chr1:9061394[A	.	PASS	SVTYPE=BND;MATEID=r_2_0	TR:VR	58:4	61:0
chr14_GL000225v1_random	105112	i_202	C	<INS>	.	Too_low_VAF	END=105174;SVTYPE=INS;SVINSLEN=94;SVINSSEQ=GGGCAGAGCTCTCATGCCTTTCCACCACCCCACCCCCGCCTGACCCCCCCTCCCCACCCCCACCCCCCACCCCCGGAAAATGCGTCCTCCCCTG	TR:VR	233:3	254:0
chr7	158360426	i_800	A	<INS>	.	PASS	END=158360426;SVTYPE=INS;SVINSLEN=1114;SVINSSEQ=TCCACCCTCATCCAGGGCCCGGCCACAGACCCCACATCCACCCTCACCCAGGGATGACGCACAGACTCCACATCCACCCTCACCCAGGACGACGCACAGACCCCACATCCACCCTCACCCAGGAGCGACGCACAGACTCCACATCCACCCCCACACCCAGGATGACGCACAGACCCCACATCACCCTCATCCCTGGCAACCCACAGACCCGCGTCCACCCTCACCCAGGACGACGCACAGACCCACATCCACCCTCCACCCAGGATGACGCACAGAACCCACATCCACCCTCACCAGGCCGACGCACAGACCCCACATCCCACCCACACCCAGGACGACGCACAGACCCCACATCCACCCTCACCCAGGACGACGCGCACAGACCCCACATCCACCCTCCACCCAGGACGACGCACAGACCCCACATCCACCCTCACCCAGGACGATGCACAGACCCCACATCCCCACCCTCACCCAGGGCCCGACGCACAGAACCCACATCCACCCTCACCCAGGACGATGCACAGACCCCACATCCACCCTCACACCCAGGATGACGCACAGACTCCACATCCCCACCTCACCCAGGACGACGCACAGACCCCACATCCACCCTCACCCAGGACGACGCACAGACCCCACATCCACCCACACCCAGGATGACGCACAGACCCCACATCCACCCTCATCCTGGCAACCCACCAGACCCCGCGTCCACCCTCACCCCAGAGGGCCAGACGCACAGACCCACATCCACCCCTCACCCAGGATGACGCACAGACCCCACATCCACCCTCATCCAGGCCAACCCACAGACCCCACATCCACCCTCACCCAGGGGGACGACGCACAGACCCCACATCCACCCTCCCCACCCAGGATGACGCACAGACCCCACATCCACCCTCACCCAAGCAGATGGACGCACAGACCCCACATCCACCCTCACCCAGGATGACGCACAGACCCCACATCCACCCTCATCCTGGCAACCCACAGACCCCGCGTCCACCCTCACCCAGGACGGACGCACAGACCCACATCCACCCACACCCAGGACGACGCACAGACCCACATCCACCCACACCCAGGACGACGGCCACAGACCCCACGT	TR:VR	46:3	22:0
chr8	9653876	r_315	C	<DEL>	.	PASS	END=9678707;SVTYPE=DEL;SVLEN=-24831;SVINSLEN=19;SVINSSEQ=CAAGTGTATAGTCATGGCT	TR:VR	54:8	56:0
chrX	146589172	d_1016	A	<DEL>	.	PASS	END=146589969;SVTYPE=DEL;SVLEN=-797;SVINSLEN=3;SVINSSEQ=ATT	TR:VR	42:3	29:0
chr16	55839515	r_136_0	C	C]chr16:55839909]	.	PASS	SVTYPE=BND;MATEID=r_136_1	TR:VR	37:6	26:0
chr16	55839909	r_136_1	A	A]chr16:55839515]	.	PASS	SVTYPE=BND;MATEID=r_136_0	TR:VR	37:6	26:0
chr2	63832258	r_197	T	<DUP>	.	PASS	END=63874820;SVTYPE=DUP;SVLEN=42562	TR:VR	62:4	58:0
chr8	9677490	r_316_0	T	TGGAA]chr8:9685319]	.	PASS	SVTYPE=BND;MATEID=r_316_1;SVINSLEN=4;SVINSSEQ=GGAA	TR:VR	44:9	38:0
chr8	9685319	r_316_1	T	TTTCC]chr8:9677490]	.	PASS	SVTYPE=BND;MATEID=r_316_0;SVINSLEN=4;SVINSSEQ=TTCC	TR:VR	44:9	38:0
chr12	54139442	r_62	A	<DUP>	.	PASS	END=54566084;SVTYPE=DUP;SVLEN=426642	TR:VR	50:4	49:0
chr14_GL000225v1_random	105560	i_204	T	<INS>	.	Too_low_VAF	END=105564;SVTYPE=INS;SVINSLEN=284;SVINSSEQ=GTAGCCAGAGCCTAGACAAGTGTTTACATCAGCTGTGTGATCAGTGACAGTGACATGTCACAATGTCCCTGTAGCCATATCCTTGACAAAAGTGACATCACCTGGGTGATCAGTGCAGAGATATGTCACAATGTCTCCAATAGGCAGAGCCTAGACACAGAGTTACATTAGCTAGGTGATCAGGGCAGAGATATGTCACAATGCCCCCTGTAGGCAGAGCCTAGATAAGAGTTACATCACCTGAGTAATCAGTACAGAAGATAAGTCACAATGATCCCTGTAGG	TR:VR	268:3	260:1
chr2	167368833	r_214	C	<DUP>	.	Too_low_VAF	END=168742419;SVTYPE=DUP;SVLEN=1373586	TR:VR	141:5	41:0
chr8	112935088	d_884	A	<DEL>	.	PASS	END=112935245;SVTYPE=DEL;SVLEN=-157	TR:VR	29:6	29:0
chr9	76677301	d_913	T	<DEL>	.	Too_small_size	END=76677342;SVTYPE=DEL;SVLEN=-41	TR:VR	32:4	22:0
chr11	65254305	r_44	G	<DUP>	.	PASS	END=65624041;SVTYPE=DUP;SVLEN=369736	TR:VR	50:3	41:0
chr12	55334889	r_63	T	<DUP>	.	Too_low_VAF	END=56728523;SVTYPE=DUP;SVLEN=1393634	TR:VR	62:3	45:0
chr2	168513926	r_215_0	T	[chr2:168809313[A	.	PASS	SVTYPE=BND;MATEID=r_215_1	TR:VR	115:7	55:0
chr2	168809313	r_215_1	A	[chr2:168513926[A	.	PASS	SVTYPE=BND;MATEID=r_215_0	TR:VR	115:7	55:0
chr2	9727909	r_192	G	<DUP>	.	PASS	END=10091116;SVTYPE=DUP;SVLEN=363207	TR:VR	65:5	61:0
chr6	51468630	r_297	T	<DUP>	.	PASS	END=51555777;SVTYPE=DUP;SVLEN=87147	TR:VR	64:11	48:0
chr8	112938312	d_885	T	<DEL>	.	PASS	END=112940577;SVTYPE=DEL;SVLEN=-2265	TR:VR	37:7	29:0
chrX	149501163	r_342	A	<DUP>	.	PASS	END=149685001;SVTYPE=DUP;SVLEN=183838	TR:VR	68:5	48:0
chr11	65333815	r_45	C	<DUP>	.	PASS	END=65686194;SVTYPE=DUP;SVLEN=352379	TR:VR	65:6	45:0
chr12	56832279	i_130	G	<INS>	.	PASS	END=56832279;SVTYPE=INS;SVINSLEN=528;SVINSSEQ=CAGTGGTCCTCAACTTTTGGCACCAAGGACCAGTTTCATGGAAGACAATTTTTCCACGGGCCAGGTTGAGGGGGGATGGTTTTGGGATAATTCAAGCGCATTACGTTTATTGTATACTTTGTATTATTATTAGATTATAATATATAATGAAATAATTATATAGCTCACCATAATGTAGAATCAGTGGGATACTTGAGCTTGTTTTTCCATAACTCTCCCATCTGGGGGTTATGGGAGACAGTGAGAGATCACCAGGCATTAGATTCTCATAAAGGATGCGCAACCTAGATCCCTTGCATGCAGAGCTCACAATACGGTTTGCGCTCCTGGTGAGAATCTAATGCTGCCACTGATCTGACAAGAGGCAGAGCTCAGATGAGAATGTGACTGATGGGGGGTGGCTGTAAATACAGATGAAGTTTTGCTTGCTTGCCCACCACTCATATCCTGCTGTGCAGCCCAGTTCCTAACAGGCCATGGACTGGTACTGGTCCATGGACCAGTGATTGGGCACCCCTGCCTTAAAAG	TR:VR	33:3	35:1
chr17	39819825	i_283	C	<INS>	.	Too_low_VAF	END=39819825;SVTYPE=INS;SVINSLEN=352;SVINSSEQ=CCTGGGCCCCTCTTACCCACATCTCAGGAATGCAGGCCCAGGCCCCAGGAGTAGCTTTTATCTCTCCCCAGGCTGCTCTGCTGAAACAAAAGCACTCTTCTGTCCTGCGACTCACCTCACTTTTGTGCATGTCCACAACAGTACATGTCACTCTCATCACTGCCTGCGCAGGCATGGCTGCCAGGGTCTGAGTCTCTGTGTGCTGCACTGCGTTTGTCCTGGCCATTCTACTGGTGCCCCCGTTTTATCTGTGACTCTTTGCTCAGGGAGTAGCTTTGCATGTGGTCTTGAATATAGCTTTGCTTTGCCACCTGAAATAGAAGAGTTGGACAGAATGGTTCCTGGTCACTGT	TR:VR	668:6	15:0
chr2	168742419	r_216	G	<DUP>	.	PASS	END=172178364;SVTYPE=DUP;SVLEN=3435945;SVINSLEN=26;SVINSSEQ=TGGCTTGGGCAGGCACTGTGGGAAGT	TR:VR	122:9	57:0
chr2	99795022	r_200	G	<DUP>	.	PASS	END=100468035;SVTYPE=DUP;SVLEN=673013	TR:VR	57:11	49:0
chr3	196898741	d_693	C	<DEL>	.	PASS	END=196898906;SVTYPE=DEL;SVLEN=-165;SVINSLEN=1;SVINSSEQ=A	TR:VR	42:6	41:0
chr12	64222091	r_64	G	<DUP>	.	PASS	END=64572545;SVTYPE=DUP;SVLEN=350454	TR:VR	52:9	61:0
chr17	39828326	r_161_0	T	T]chr5:107842787]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_161_1	TR:VR	433:9	48:0
chr5	107842787	r_161_1	T	T]chr17:39828326]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_161_0	TR:VR	433:9	48:0
chr2	168889839	r_217_0	C	C]chr2:171130312]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_217_1	TR:VR	124:6	48:0
chr2	171130312	r_217_1	G	G]chr2:168889839]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_217_0	TR:VR	124:6	48:0
chr20	10348343	i_486	T	<INS>	.	PASS	END=10348343;SVTYPE=INS;SVINSLEN=328;SVINSSEQ=TTTTTTTTTTTTTTTTTTTCTTTCTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCTACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGATATTTTTTAA	TR:VR	30:8	31:0
chr6	117351338	r_299	C	<DUP>	.	PASS	END=117537044;SVTYPE=DUP;SVLEN=185706	TR:VR	60:3	47:0
chr2	169463445	i_470	G	<INS>	.	PASS	END=169463445;SVTYPE=INS;SVINSLEN=199;SVINSSEQ=GGGAATCCTGTGGACGTTTCTTTCCTTTGCCCATTATAAAACACCCTTTGAAAGCATTTGTATAAAATATGCCTCATTTTTTTTTTGGTGGGAAGCCATGTTATTTTCAGTGGAAATGAAGATAATTGCAAATTAGATTTTGCCCAAGTATATATAAGAGGTGTGCATTTTATTGTTTTTCCTCCTTATGTACCTTGAG	TR:VR	58:6	25:0
chr20	15081159	r_237	A	<DEL>	.	PASS	END=15213129;SVTYPE=DEL;SVLEN=-131970	TR:VR	56:3	36:0
chr10	58748927	r_31_0	A	]chr4:65880186]C	.	PASS	SVTYPE=BND;MATEID=r_31_1	TR:VR	74:6	49:0
chr4	65880186	r_31_1	C	C[chr10:58748927[	.	PASS	SVTYPE=BND;MATEID=r_31_0	TR:VR	74:6	49:0
chr14	104961331	r_113_0	A	[chr14:104972123[GCAG	.	PASS	SVTYPE=BND;MATEID=r_113_1;SVINSLEN=3;SVINSSEQ=GCA	TR:VR	45:4	36:0
chr14	104972123	r_113_1	G	[chr14:104961331[TGCG	.	PASS	SVTYPE=BND;MATEID=r_113_0;SVINSLEN=3;SVINSSEQ=TGC	TR:VR	45:4	36:0
chr2	169763861	r_218_0	G	[chr2:182144730[T	.	PASS	SVTYPE=BND;MATEID=r_218_1	TR:VR	101:8	56:0
chr2	182144730	r_218_1	T	[chr2:169763861[T	.	PASS	SVTYPE=BND;MATEID=r_218_0	TR:VR	101:8	56:0
chr20	15213845	r_238	A	<DEL>	.	PASS	END=15215386;SVTYPE=DEL;SVLEN=-1541;SVINSLEN=8;SVINSSEQ=CATGTCCA	TR:VR	36:3	23:0
chr6	13471113	r_294	A	<DUP>	.	PASS	END=13628425;SVTYPE=DUP;SVLEN=157312	TR:VR	52:4	44:0
chr11	76269311	r_46_0	G	[chr16:34228935[TGATTGAAAGCTGAACTATGAAAGCAAGGTTCAACTCTGTGAGTTGAATGCAAACATCCAAAGAAGTTTCTCAGAATGCTTCCGTGTAGTTCTGGGAAGTTTATCCCGTTTCCAACGAAATCCTCAGAGAC	.	PASS	SVTYPE=BND;MATEID=r_46_1;SVINSLEN=130;SVINSSEQ=TGATTGAAAGCTGAACTATGAAAGCAAGGTTCAACTCTGTGAGTTGAATGCAAACATCCAAAGAAGTTTCTCAGAATGCTTCCGTGTAGTTCTGGGAAGTTTATCCCGTTTCCAACGAAATCCTCAGAGA	TR:VR	60:4	67:0
chr16	34228935	r_46_1	C	[chr11:76269311[TCTCTGAGGATTTCGTTGGAAACGGGATAAACTTCCCAGAACTACACGGAAGCATTCTGAGAAACTTCTTTGGATGTTTGCATTCAACTCACAGAGTTGAACCTTGCTTTCATAGTTCAGCTTTCAATCAC	.	PASS	SVTYPE=BND;MATEID=r_46_0;SVINSLEN=130;SVINSSEQ=TCTCTGAGGATTTCGTTGGAAACGGGATAAACTTCCCAGAACTACACGGAAGCATTCTGAGAAACTTCTTTGGATGTTTGCATTCAACTCACAGAGTTGAACCTTGCTTTCATAGTTCAGCTTTCAATCA	TR:VR	60:4	67:0
chr17	39828478	i_284	A	<INS>	.	PASS	END=39828478;SVTYPE=INS;SVINSLEN=282;SVINSSEQ=GGCCCATCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGCGAACCCTGGGCTTATTTCTAAACCTCAAGAGTTTTCATGTATACATCCCTTTTGGGTATGTGTGAAGGGGTACTATCTGTCACTAAAGGATTGTGTGAAGCTGAAAGTTAAATGGGGGTCTACTTAATACATATTTATAAAAATCCTTTAACGTTGAACCACATACTTAAAATTCCTTTTATCTTTTAGAAAGTGCAGCGGTTTTGAATGACTACAGTTTAACCAAATCTCA	TR:VR	495:88	18:0
chr17_KI270730v1_random	99404	d_444	A	<DEL>	.	Too_low_VAF	END=99700;SVTYPE=DEL;SVLEN=-296;SVINSLEN=91;SVINSSEQ=TGGTGACATGAAATGTTAACTAAGATTGTGCACTGAACTCCAGCCTGGGTGACAGAGTGAGATCCCATCAAAAGAAAGGAGTGGAATGGAA	TR:VR	160:3	135:0
chr6	136981679	r_300_0	A	A]chr6:137115948]	.	PASS	SVTYPE=BND;MATEID=r_300_1	TR:VR	65:4	47:0
chr6	137115948	r_300_1	T	T]chr6:136981679]	.	PASS	SVTYPE=BND;MATEID=r_300_0	TR:VR	65:4	47:0
chr9	124981298	d_921	C	<DEL>	.	PASS	END=124983190;SVTYPE=DEL;SVLEN=-1892	TR:VR	31:13	32:0
chr10	58870012	r_33_0	A	A]chr14:105089137]	.	PASS	SVTYPE=BND;MATEID=r_33_1	TR:VR	70:8	35:0
chr14	105089137	r_33_1	A	A]chr10:58870012]	.	PASS	SVTYPE=BND;MATEID=r_33_0	TR:VR	70:8	35:0
chr12	83617469	r_66_0	T	TTTTTTTTTTTTTTTTTTTTTTTTTT]chrX:11713316]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_66_1;SVINSLEN=25;SVINSSEQ=TTTTTTTTTTTTTTTTTTTTTTTTT	TR:VR	69:3	60:1
chrX	11713316	r_66_1	A	AAAAAAAAAAAAAAAAAAAAAAAAAA]chr12:83617469]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_66_0;SVINSLEN=25;SVINSSEQ=AAAAAAAAAAAAAAAAAAAAAAAAA	TR:VR	69:3	60:1
chr14_KI270726v1_random	32998	r_119_0	T	T[chr7:153166350[	.	PASS	SVTYPE=BND;MATEID=r_119_1	TR:VR	56:3	48:0
chr7	153166350	r_119_1	T	]chr14_KI270726v1_random:32998]T	.	PASS	SVTYPE=BND;MATEID=r_119_0	TR:VR	56:3	48:0
chr19	3641801	r_182_0	T	TG]chr6:60238220]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_182_1;SVINSLEN=1;SVINSSEQ=G	TR:VR	72:3	44:0
chr6	60238220	r_182_1	G	GC]chr19:3641801]	.	Too_low_VAF	SVTYPE=BND;MATEID=r_182_0;SVINSLEN=1;SVINSSEQ=C	TR:VR	72:3	44:0
chr2	170839952	r_219	A	<DUP>	.	PASS	END=170893548;SVTYPE=DUP;SVLEN=53596	TR:VR	112:8	61:0
chr20	62330924	r_245	C	<DUP>	.	PASS	END=62518182;SVTYPE=DUP;SVLEN=187258	TR:VR	60:7	56:0
chr22	48605525	i_587	A	<INS>	.	PASS	END=48605541;SVTYPE=INS;SVINSLEN=694;SVINSSEQ=CGGTGATGGTAATGATGGTGGTGATAGTGATGATGATGGTGATGGTGGTGGTGGTGATGGTGATGTTAATGATGGTGGTGATAGTGATGACGGTGATGGTGGCGGTGGCGGTGATGGCGATGGTGATGGTAATAATGGTGGTGATGGTGACGGTGATGATGGTGATGATGATGATGAGGGTGATGGTGATGATGTTGGTGATGGTGATGGTGGTGATGATAATGATGGTGGTGATGGTGGTGGTGGTGATGGTGATGATGGTGGTGATGGTGTTGATGGTGATCTTGGTAATGGTGATGATGGTGGTGGTGATGGCAATGGTGATGATGGTGGTGATGGTGTTGATGGTGATCATGGTGGTAATGGTGATGATGGTGGTGATGGTGGTGATGGTGATGGTAATGATGGTGATGATGGTGATGAGGGTGATGGTGAGGATGATGGTAATGATGTTGTTAATGGTGGTGATGGTGATGATGGTGGTGATGGTGATGATGGTGATGATGGTGATGGCGATGGTGATGATGGTGGTGATGGTGTTGATGGTGATCATGGTGGTAATGGTAATATGTAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATATTAGTAGTAATAATAATAATAATAACATGATGAGGCAAGCAGGCTTGCA	TR:VR	39:4	31:0
chr9	9792401	r_321	T	<DUP>	.	PASS	END=9812509;SVTYPE=DUP;SVLEN=20108;SVINSLEN=16;SVINSSEQ=TGATGATTTTAAGTGA	TR:VR	49:3	39:0
chr10	60014695	r_34	T	<DEL>	.	PASS	END=62581444;SVTYPE=DEL;SVLEN=-2566749	TR:VR	66:6	36:0
chr15	100100390	r_131_0	A	[chr6:41543107[T	.	PASS	SVTYPE=BND;MATEID=r_131_1	TR:VR	67:10	60:0
chr6	41543107	r_131_1	T	[chr15:100100390[T	.	PASS	SVTYPE=BND;MATEID=r_131_0	TR:VR	67:10	60:0
chr18	10542330	r_176_0	A	AATTT]chr2:97612379]	.	PASS	SVTYPE=BND;MATEID=r_176_1;SVINSLEN=4;SVINSSEQ=ATTT	TR:VR	52:4	47:0
chr2	97612379	r_176_1	C	CAAAT]chr18:10542330]	.	PASS	SVTYPE=BND;MATEID=r_176_0;SVINSLEN=4;SVINSSEQ=AAAT	TR:VR	52:4	47:0
chr2	170892945	r_220_0	C	[chr2:178068708[G	.	PASS	SVTYPE=BND;MATEID=r_220_1	TR:VR	105:8	66:0
chr2	178068708	r_220_1	G	[chr2:170892945[G	.	PASS	SVTYPE=BND;MATEID=r_220_0	TR:VR	105:8	66:0
chr9	128486059	r_328	C	<DUP>	.	PASS	END=129084760;SVTYPE=DUP;SVLEN=598701	TR:VR	58:6	55:0
chr12	91536893	r_67	A	<DUP>	.	PASS	END=126407148;SVTYPE=DUP;SVLEN=34870255	TR:VR	58:9	60:0
chr15	100623482	r_132	A	<DUP>	.	PASS	END=100846240;SVTYPE=DUP;SVLEN=222758	TR:VR	72:9	55:0
chr18	11976548	r_177	T	<DEL>	.	PASS	END=14529708;SVTYPE=DEL;SVLEN=-2553160;SVINSLEN=27;SVINSSEQ=ATAAACTTAACCCTAGTGCAACTAGTA	TR:VR	68:8	52:0
chr2	171655638	r_221	A	<DEL>	.	Too_low_VAF	END=171898392;SVTYPE=DEL;SVLEN=-242754	TR:VR	115:5	62:0
chr6	149984043	i_726	C	<INS>	.	PASS	END=149984043;SVTYPE=INS;SVINSLEN=213;SVINSSEQ=TTTTTTGAGTGGAAGGGCTGGGTGTCTTTTTTTTTTTTGGTGGAAGGGCTGGGTGTCTTTTTTTTTTTTTTTTGGTGGAAGGGGCTGGGTGTCTTTTTTGGTGGAAGGGCTGGGTGTCTTTTTTTTTTCTTTTTTGAGCTGGAAGGGCTGGGTGTCTTTTTCTTTTTTTTTTTTTTTGGTGGAAGGGCTGGGTGTCTTTTTCTTTTTTTTTTT	TR:VR	37:4	26:0
chr9	99005507	r_327	C	<DUP>	.	PASS	END=99098216;SVTYPE=DUP;SVLEN=92709	TR:VR	67:5	47:0