##fileformat=VCFv4.3 ##fileDate=20230117 ##source=nanomonsv-0.5.0 ##reference=/projects/jfan_prj/jfan_prj/Nanopore_Testing/2021_nanopore_sv_testing/scratch/depth_testing/POG/COLO829/hg38_no_alt.fa ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##FILTER= ##FILTER= ##FILTER= ##FILTER= ##FILTER= ##FILTER= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##ALT= ##ALT= ##ALT= ##FORMAT= ##FORMAT= #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT TUMOR CONTROL chr1 204858009 d_209 T . PASS END=204858069;SVTYPE=DEL;SVLEN=-60 TR:VR 27:13 17:0 chr10 105752947 r_81 A . PASS END=108677656;SVTYPE=DEL;SVLEN=-2924709 TR:VR 54:15 28:0 chr10 42167869 r_70_0 A ATTGAATGCAATCATCATCGAATGGAATAGAACGGAATCATTGAATGGACTCGAATGGAATCATCATCAAATGGAATCGAGTGGAATCATCGAATGGACTCGA]chr14_KI270725v1_random:99254] . Too_low_VAF SVTYPE=BND;MATEID=r_70_1;SVINSLEN=102;SVINSSEQ=TTGAATGCAATCATCATCGAATGGAATAGAACGGAATCATTGAATGGACTCGAATGGAATCATCATCAAATGGAATCGAGTGGAATCATCGAATGGACTCGA TR:VR 93:4 43:0 chr14_KI270725v1_random 99254 r_70_1 C CTCGAGTCCATTCGATGATTCCACTCGATTCCATTTGATGATGATTCCATTCGAGTCCATTCAATGATTCCGTTCTATTCCATTCGATGATGATTGCATTCAA]chr10:42167869] . Too_low_VAF SVTYPE=BND;MATEID=r_70_0;SVINSLEN=102;SVINSSEQ=TCGAGTCCATTCGATGATTCCACTCGATTCCATTTGATGATGATTCCATTCGAGTCCATTCAATGATTCCGTTCTATTCCATTCGATGATGATTGCATTCAA TR:VR 93:4 43:0 chr12 46385812 d_423 C . PASS END=46386196;SVTYPE=DEL;SVLEN=-384 TR:VR 25:12 15:0 chr14_GL000225v1_random 30734 r_176_0 G GTT[chrY:11309246[ . Too_low_VAF SVTYPE=BND;MATEID=r_176_1;SVINSLEN=2;SVINSSEQ=TT TR:VR 841:4 408:0 chrY 11309246 r_176_1 G ]chr14_GL000225v1_random:30734]AAG . Too_low_VAF SVTYPE=BND;MATEID=r_176_0;SVINSLEN=2;SVINSSEQ=AA TR:VR 841:4 408:0 chr2 91513452 d_1197 C . Too_low_VAF END=91513827;SVTYPE=DEL;SVLEN=-375 TR:VR 270:5 72:1 chr20 24836160 i_863 C . PASS END=24836193;SVTYPE=INS;SVINSLEN=196;SVINSSEQ=CCCTCCACCTGCCTACCCACACACACACCCCCCTCCACCTGCCTACCTCTCCACACACCCCCCTCCACCTGCCTACCTTCCACACACCCACCCTCCACCTGCCTACCCTCCACACACCCCCCTCCACCTGCCTACCCTCCACCCACCCACCCTCCACATGCCTACCCTCCACACACCCACCCTCCACCCACCCACC TR:VR 44:10 13:0 chr3 128501069 r_418 G . PASS END=128668460;SVTYPE=DUP;SVLEN=167391 TR:VR 190:15 28:0 chr3 38084437 i_1081 G . PASS END=38084437;SVTYPE=INS;SVINSLEN=882;SVINSSEQ=GCGGTAGTAGCGGCGGCAGCAGCAGCAACAGCAGCGGCGGCGGCGGCAGCAGCGGCGGCAGCAGCAGTGGCAGCAGCAGCGGCAGCAGCAGCAGCGGCGGCGGCAGCGGCAGCAGCAGCGGCAGCAGCAGCAGCGGGGGCGGCAGCAGCAGCGGCAGCAGCAGCAGCGGCAGCAGCAGCAGCGGCGGCGGCAGCGGCAATAGTAGCGGTAGTGGTGGTTGTGGTAGTAGTAGTGGTAGTAGTGGTAGTAGTAGTAGTAGTAGTGGTAGTAGTAGTGGTGGCGGCAGTAGTAGCGGCAGCAGCAGCAGTGGCGGCAGTAGTGGTGGTAGTAGTGGTACCAGCAGTAGTGGTGGTGGTAGTAGTAGTAGTGGTTGTGGTGGTAGTAGTGGTAGTAGTAGTGGTGGTGGTGGTGGTGGTAGTGGTGGTGGTGGTAGTAGTAGTGGTGGTGGTAGTAGTAGTAGTAGTGGTGGTGGTAGTAGTAGTAGTAGTAGTGGTGGTGGTGGTAGTAGTAGTAGTAGTAGTGGTGGTGGTGGTAGTGGCTACGGCGGTAGTAGTGGTGGTTGTGGTGGTAGTAGCAGTAGTAGTAGTGGTGGTGGTATTATTATTAGTAGCAGTATTAGTGAGCAGCGGTAGTGGTTAGTAGTAGTGGTGGTGGTAGCAGTAGTGGTGGTTGCGGTTAGTTAGCAGCGGTGGTGGTTACAGCAGCAGGCGGCCGCGGCAGCAGTATTGGCAGCAGTGGTAGCGGTGGTGGTGGTAGTAGTGGCGGTTGTGGTTGGCAGCAGTTGGTAGCGGCGAGCAAGAAAGCAGCTACCGGCGGTAGTAGCTAGTGGGCAGTTGTTAGTTATTAGTGGCAGTGGCGGCCGCGTTGTTACTGCTTTCGCAG TR:VR 46:3 21:0 chr5 151445246 r_471 T . PASS END=151446129;SVTYPE=DEL;SVLEN=-883 TR:VR 37:17 18:0 chr6 134191150 d_1881 T . PASS END=134191650;SVTYPE=DEL;SVLEN=-500;SVINSLEN=5;SVINSSEQ=CGCCC TR:VR 47:19 12:0 chr8 125337944 r_534 C . PASS END=125360202;SVTYPE=DUP;SVLEN=22258 TR:VR 105:8 17:0 chr9 3703385 r_546 A . PASS END=3759487;SVTYPE=DUP;SVLEN=56102 TR:VR 90:15 24:0 chrX 48092645 d_2284 T . PASS END=48096110;SVTYPE=DEL;SVLEN=-3465 TR:VR 42:12 12:0 chr1 10037333 d_35 T . PASS END=10043257;SVTYPE=DEL;SVLEN=-5924;SVINSLEN=75;SVINSSEQ=ATTTTTAGTAGCGACGGGGTTTCTCCATGTTGGTCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCTGCCTGC TR:VR 50:6 20:0 chr1 209115060 i_71 A . PASS END=209115079;SVTYPE=INS;SVINSLEN=195;SVINSSEQ=CAGTTAGCTACCAATCTGATTAATTATAATTAATAAATTATTGTTGTGGAAGGTGAGATATTTCCTTGATTCATCTGGGAATTTCCCTATTAGCCATTGCTAAGATTAGTAAGTTAAATGTGGGAAACCTAGATATTTTTTTCCTTAAAAATCCCATTTACTTCTCTGAGAGAACAATTGGCACCAGCCAATATA TR:VR 35:17 14:0 chr10 109612903 r_82_0 T T[chr2:178678445[ . PASS SVTYPE=BND;MATEID=r_82_1 TR:VR 76:14 26:0 chr2 178678445 r_82_1 A ]chr10:109612903]A . PASS SVTYPE=BND;MATEID=r_82_0 TR:VR 76:14 26:0 chr11 69101267 r_96 A . PASS END=69117431;SVTYPE=DUP;SVLEN=16164 TR:VR 94:13 20:0 chr15 48785790 r_198 T . PASS END=48789474;SVTYPE=DUP;SVLEN=3684 TR:VR 58:9 12:0 chr16 83569903 d_903 A . PASS END=83570321;SVTYPE=DEL;SVLEN=-418;SVINSLEN=3;SVINSSEQ=AAT TR:VR 65:39 24:0 chr2 20438218 r_287_0 T ]chr3:181922655]GGTTATTA . PASS SVTYPE=BND;MATEID=r_287_1;SVINSLEN=7;SVINSSEQ=GGTTATT TR:VR 142:11 34:0 chr3 181922655 r_287_1 A AAATAACC[chr2:20438218[ . PASS SVTYPE=BND;MATEID=r_287_0;SVINSLEN=7;SVINSSEQ=AATAACC TR:VR 142:11 34:0 chr20 36913049 r_358 T . PASS END=36931163;SVTYPE=DEL;SVLEN=-18114;SVINSLEN=76;SVINSSEQ=ACAAGTCCTTCATTGCAAGAACTTTCATTCTTTTTCTTTTCTTTCTTCCTTTTTTTTTTTTTTTGAGATGGAGTCC TR:VR 57:17 21:0 chr21 39181287 r_376 C . PASS END=39455768;SVTYPE=DUP;SVLEN=274481 TR:VR 71:9 43:0 chr3 128627964 r_419 T . PASS END=128628305;SVTYPE=DEL;SVLEN=-341 TR:VR 100:11 11:0 chr3 42104825 d_1537 G . PASS END=42104974;SVTYPE=DEL;SVLEN=-149 TR:VR 33:14 12:0 chr6 134191150 d_1882 T . PASS END=134191824;SVTYPE=DEL;SVLEN=-674 TR:VR 47:21 12:0 chr8 127081665 d_2035 A . PASS END=127081807;SVTYPE=DEL;SVLEN=-142 TR:VR 56:23 28:0 chr1 10037324 d_36 G . PASS END=10037968;SVTYPE=DEL;SVLEN=-644 TR:VR 48:8 16:0 chr1 32066072 i_36 A . PASS END=32066093;SVTYPE=INS;SVINSLEN=38;SVINSSEQ=TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT TR:VR 40:4 6:0 chr10 117489817 r_83 G . PASS END=117621140;SVTYPE=DUP;SVLEN=131323;SVINSLEN=8;SVINSSEQ=CTCAGGAA TR:VR 68:14 23:0 chr13 37292257 d_467 G . PASS END=37294429;SVTYPE=DEL;SVLEN=-2172 TR:VR 31:9 26:0 chr14 29128734 r_159 T . PASS END=29185701;SVTYPE=DUP;SVLEN=56967 TR:VR 92:9 29:0 chr16 33336554 d_812 C . Too_low_VAF END=33336593;SVTYPE=INS;SVINSLEN=39;SVINSSEQ=TTGCCTGGCTGGGTTGGTTGGCTGGCTTGGATGGCTTGG TR:VR 159:4 59:0 chr2 119857245 d_1240 A . PASS END=119857296;SVTYPE=DEL;SVLEN=-51 TR:VR 27:8 15:0 chr2 20447298 r_288_0 C C[chr3:181916142[ . PASS SVTYPE=BND;MATEID=r_288_1 TR:VR 125:14 32:0 chr3 181916142 r_288_1 C ]chr2:20447298]C . PASS SVTYPE=BND;MATEID=r_288_0 TR:VR 125:14 32:0 chr20 2603913 r_346_0 G [chr3:10004[A . Too_low_VAF SVTYPE=BND;MATEID=r_346_1 TR:VR 522:5 166:0 chr3 10004 r_346_1 A [chr20:2603913[A . Too_low_VAF SVTYPE=BND;MATEID=r_346_0 TR:VR 522:5 166:0 chr21 39476875 d_1424 T . Too_small_size END=39476914;SVTYPE=DEL;SVLEN=-39;SVINSLEN=2;SVINSSEQ=GG TR:VR 34:10 20:0 chr3 47876215 d_1538 T . PASS END=47876350;SVTYPE=DEL;SVLEN=-135 TR:VR 44:16 15:0 chrX 112864357 d_2297 G . PASS END=112864573;SVTYPE=DEL;SVLEN=-216 TR:VR 38:16 18:0 chr1 33730174 r_11_0 A [chr10:128534896[T . PASS SVTYPE=BND;MATEID=r_11_1 TR:VR 63:11 26:0 chr10 128534896 r_11_1 T [chr1:33730174[T . PASS SVTYPE=BND;MATEID=r_11_0 TR:VR 63:11 26:0 chr10 119102203 d_318 A . PASS END=119104686;SVTYPE=DEL;SVLEN=-2483 TR:VR 27:19 13:0 chr15 100710634 i_464 G . PASS END=100710634;SVTYPE=INS;SVINSLEN=377;SVINSSEQ=TGGAGGTGGTGGTGGAGGTCATGGTGGAGGTGGAGGTGGTGGTGGAGGTCATGGTGGAGGTGGAGGTGGTGGTGGAGGTCATGGTGGAGGTGGAGGTCGTGGTGGAGGTGGAGGTCAGTGATGGAGGTGGAGGTGGAAGTGGGAGGTCATGGTGGAGGTGGAGGTGGTGGTGGAGGTCCTGGTGGAGGTGGAGGTCATGGTGGAGGTGGAGGTGGTGGTGGAGGGCATGGTGGAGGTGGAGGTCATGGTGGGAGGTGGAGGTCATGGTGGAGGTGGGGAGGTGGAGGTCATGGTGGAGATGGAGGTGTGGAGGTCATGGTGGAGGGGGAGGTCATGGTGAAGGTGGAGGTGGAGGTCATGGTGGAGGTGGAGGTCAT TR:VR 72:4 13:0 chr15 57119247 d_767 C . PASS END=57119305;SVTYPE=DEL;SVLEN=-58 TR:VR 32:14 13:0 chr18 78563752 r_261_0 C [chr5:1482462[CACACCCCACCCCACCCCACCCCACCCCACCCCACCCCAACATCCCCACATCCCCACACCCCACATCCCCACACCCCACACCCCACACCCCACACCCCACACCCCACAG . Too_low_VAF SVTYPE=BND;MATEID=r_261_1;SVINSLEN=108;SVINSSEQ=CACACCCCACCCCACCCCACCCCACCCCACCCCACCCCAACATCCCCACATCCCCACACCCCACATCCCCACACCCCACACCCCACACCCCACACCCCACACCCCACA TR:VR 663:7 75:0 chr5 1482462 r_261_1 G [chr18:78563752[TGTGGGGTGTGGGGTGTGGGGTGTGGGGTGTGGGGTGTGGGGATGTGGGGTGTGGGGATGTGGGGATGTTGGGGTGGGGTGGGGTGGGGTGGGGTGGGGTGGGGTGTGG . Too_low_VAF SVTYPE=BND;MATEID=r_261_0;SVINSLEN=108;SVINSSEQ=TGTGGGGTGTGGGGTGTGGGGTGTGGGGTGTGGGGTGTGGGGATGTGGGGTGTGGGGATGTGGGGATGTTGGGGTGGGGTGGGGTGGGGTGGGGTGGGGTGGGGTGTG TR:VR 663:7 75:0 chr2 204535847 d_1263 T . PASS END=204536195;SVTYPE=DEL;SVLEN=-348 TR:VR 34:27 13:0 chr20 2603913 r_347_0 G ]chrX:156030267]T . Too_low_VAF SVTYPE=BND;MATEID=r_347_1 TR:VR 468:9 144:0 chrX 156030267 r_347_1 T T[chr20:2603913[ . Too_low_VAF SVTYPE=BND;MATEID=r_347_0 TR:VR 468:9 144:0 chr3 55286125 d_1539 A . PASS END=55286175;SVTYPE=DEL;SVLEN=-50 TR:VR 36:12 16:0 chr4 174893264 r_452 T . PASS END=174911997;SVTYPE=DUP;SVLEN=18733 TR:VR 51:15 22:0 chr5 154931829 d_1827 A . PASS END=154931970;SVTYPE=DEL;SVLEN=-141 TR:VR 38:17 10:0 chr8 128124878 r_535 C . PASS END=128189650;SVTYPE=DUP;SVLEN=64772 TR:VR 135:13 34:0 chrX 11482342 r_573_0 C [chrX:11485892[C . PASS SVTYPE=BND;MATEID=r_573_1 TR:VR 59:10 16:0 chrX 11485892 r_573_1 C [chrX:11482342[C . PASS SVTYPE=BND;MATEID=r_573_0 TR:VR 59:10 16:0 chr1 34677114 r_12 A . PASS END=34752995;SVTYPE=DUP;SVLEN=75881 TR:VR 133:17 27:0 chr15 58256120 d_768 A . Too_small_size END=58256164;SVTYPE=DEL;SVLEN=-44 TR:VR 35:12 17:0 chr2 204843637 r_334 A . PASS END=204861949;SVTYPE=DUP;SVLEN=18312 TR:VR 64:8 22:0 chr20 26069904 r_353 A . PASS END=26121029;SVTYPE=DUP;SVLEN=51125 TR:VR 99:12 31:0 chr3 195786290 d_1628 T . PASS END=195787705;SVTYPE=DEL;SVLEN=-1415;SVINSLEN=24;SVINSSEQ=GACAGGAAGAGGAGGTGGCGTGAC TR:VR 53:4 18:0 chr3 56551050 r_394 A . PASS END=56733892;SVTYPE=DUP;SVLEN=182842 TR:VR 89:17 27:0 chr4 17516491 r_433 T . PASS END=17674480;SVTYPE=DUP;SVLEN=157989 TR:VR 84:14 22:0 chr4 68763741 r_441_0 T TG[chrX:81805740[ . Too_low_VAF SVTYPE=BND;MATEID=r_441_1;SVINSLEN=1;SVINSSEQ=G TR:VR 81:3 27:0 chrX 81805740 r_441_1 T ]chr4:68763741]CT . Too_low_VAF SVTYPE=BND;MATEID=r_441_0;SVINSLEN=1;SVINSSEQ=C TR:VR 81:3 27:0 chr6 134191716 d_1885 T . PASS END=134191806;SVTYPE=INS;SVINSLEN=220;SVINSSEQ=GCAGTGCAGTGGTGTGACCTCGGCTCACTGAAACCTCCACCTCCGGGTTTCAAGGGATGCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACGGGGGCCCGCCACCATGCCCAGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGAATGGTCTCAATCTCCTGACCTCGTGATCCGCCCGCCTTGGCGTCCTAAAGTGCTGGGAT TR:VR 47:19 12:0 chr8 128131903 d_2037 T . PASS END=128131978;SVTYPE=DEL;SVLEN=-75 TR:VR 80:19 15:0 chr1 210717074 r_50 A . PASS END=210813692;SVTYPE=DUP;SVLEN=96618 TR:VR 74:12 26:0 chr12 46854658 d_428 G . PASS END=46854805;SVTYPE=DEL;SVLEN=-147 TR:VR 17:10 17:0 chr13 44764635 r_147 C . PASS END=44812027;SVTYPE=DUP;SVLEN=47392 TR:VR 57:13 30:0 chr15 59554072 d_769 G . PASS END=59554119;SVTYPE=DEL;SVLEN=-47 TR:VR 46:14 16:0 chr16 84009250 d_907 C . PASS END=84009689;SVTYPE=DEL;SVLEN=-439 TR:VR 32:20 13:0 chr17 26756952 r_244_0 C C[chr22:10691586[ . Too_low_VAF SVTYPE=BND;MATEID=r_244_1 TR:VR 196:4 68:0 chr22 10691586 r_244_1 T ]chr17:26756952]T . Too_low_VAF SVTYPE=BND;MATEID=r_244_0 TR:VR 196:4 68:0 chr2 24401593 d_1099 T . PASS END=24404228;SVTYPE=DEL;SVLEN=-2635 TR:VR 32:20 15:0 chr20 2610540 r_348_0 T T]chr20:2616571] . PASS SVTYPE=BND;MATEID=r_348_1 TR:VR 128:11 18:0 chr20 2616571 r_348_1 G G]chr20:2610540] . PASS SVTYPE=BND;MATEID=r_348_0 TR:VR 128:11 18:0 chr20 43652437 d_1361 A . PASS END=43654127;SVTYPE=DEL;SVLEN=-1690 TR:VR 43:16 15:0 chr22 15420593 d_1487 A . PASS END=15420631;SVTYPE=INS;SVINSLEN=83;SVINSSEQ=GACTGCGTGGGTCTGAAAGTTTGTCTCTCATAAAGGACTCTAGAACACTGCTGCCGGGTTCTCAGTGTTTGTCACTCAAATAA TR:VR 33:10 10:0 chr3 129798583 d_1558 A . Too_small_size END=129798625;SVTYPE=DEL;SVLEN=-42 TR:VR 69:16 12:0 chr3 59991692 d_1540 C . Too_small_size END=59991734;SVTYPE=DEL;SVLEN=-42 TR:VR 36:14 15:0 chr6 170495841 i_1426 A . PASS END=170495841;SVTYPE=INS;SVINSLEN=810;SVINSSEQ=AGGAGGATGGGGTTGGAGGAACAACAGGCGGTGGTAAAAAGGAGGATGGGGTTGGAGGAACTTCTGGAGACGGTGGTGAAGAGGAGGATGGGGTTGGAGGAACTACAGAGAGGTGGTGAAGAGGAGGACAGGGTTGGAGGAACTACTAGAGCGGTGGTGAAGAGGAGGATGGGGTTGGAGGAACTACAGAGCGGTGGTAAAAATGAGGATGGGGTTGGAGGAACTACAGAGCGGTGGTGAAGAGGAGGACAGGGGTTGGAGGAACTAGAGGCGGTGGTGAAAAGGAGGACAGGGTTGGAGGAACTACAGAGCGGTGGTGAAGAGGAGGATGGGGTTGGAGGAACTACAGAGCGGTGGTGAAAAGGAGGACGGGGGTTGGAGGAACTACAGAGCGGTGGTGAAGAGGAGGATGGGGTTGGAGGAACTACAGAGCGGTGGTGAAAGAGGAGGACGTGGGGTTGGAGGAACTACAGAGGAGCGGTGGTGAAGAGGGAGGATGGGGTTGGAGGAACTACAGAGCGGTGGTGAAGAGGAGGACGGGGTTGGAGGAACTACAGAGCGGTGGTGAAGAGGAGGATGGGGTTGGAGGAACTACAGAGGCGGTGGTAAAAATGAGGATGGGGTTGGAGGAACTACAGAGGCGGTGGTGAAGAGGAGGATGGGGTTGGAGGAACTACAGAGCGGTGGTGAAGAGGATGGGGTTGGAGGAACTACAGAGCGGTGGTAAAAATGAGGACAGGGTTGGAGGAACTGCAGAGCAGTGGTGAAGAGGAGGATGGGGTTGGAGGAACTACAGAGGGTCGTGAAAGA TR:VR 52:6 10:0 chr6 858972 i_1351 G . PASS END=858972;SVTYPE=INS;SVINSLEN=1919;SVINSSEQ=CACTGCATCATGTTTCTAGTTAACTGCAAAGCAAATAGTCCATGGCCTTCTAAGGTTGGACATTTTATAAATGTGGCTAGATATTCAGGCTTATTGCACCATCGCTGCATTTTTTTCTTAGATTGCTCTCTTCAGAGGAAATAAATTAAAATATACTAATTGTGTTAGAAAAGCCTAAACCTTAAAATTCAATATAATTGTGGTCAAATAATGCAGATTATGAAATGTGCATGTGAGGAGTCCTAGCTCAAGGAGAAGTCGTGCCTCAGTCACTGCCACTCGTCCACCCATCCATCCTCCTATCCGCTCATTTATCCATCCATCCACCTATCCATCCATCCATCCATCCATCCATCCATCCATCCTCCTATCCTCTCATTTATCCATCCATCCACCTATCCACCCATCCATCCATCCTCCTATCCTCTCATTTATCCATCCATCCACCTATCCATTCCTCCATCCATCCTCTCTCATTTATCCATCCATCCACCTATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCTCCTGTCCTCTCATTTATCCATCCATCCACCTATCCACCCATCCATCCATCCTCTATCCTCTCATTTATCCATCCATCCACCTAGTCACCCATCCATCCATCCTCTTATCCTCTCATTTATCCATCCATCCACCTATCCGTCCATCCATCCTCCTATCCTCTCATTTATCCATCCATCCACCTATCAATCCATCCATCCATCCACCTATCAATCCATCCATCCATCCTCCTATCCTCTCATTTATCCATCGATCCACCTATCCACCTATCCATCCATCCTCCTATCCTCTCATTTATCCATCCATCCACCTATCCATCCATCCATCCATCTATGTGTCTATCCAACAAATAGTTACTCAGCACCTACTGTGTACCCAGCAGTATTTTAGGAGCTGAGGTCACACGTCACACAACTGAGTAAAAGAGATAAAAAAAGTCCCTGCTGTATTGGAGCTCACACCCTGGGCCAACTTCTGTCTTTGAGCCTCTTCCAGATGAGGCTGATGCCAATGGGAAACTTTCCTCCAAGGGGAAGGTGTGCACTTAGTCCCTACACTTTCTCCAAGTGGTTAGTATTTGGTAAGTTCATAAGTTAGGAAACCTTTATGGTGGTCCCACACTCCTGGGCATACATCAGGAGAGTACAGTTTTCATAACATGCGTGACTAATCTTTGCATTTCTTTTTCTTGAAATCAAGAATATGAAGGCAATTAAAGAACAAAAACCATAGCATGCCCCAAATTACGAAAAGAACTGGCATTTGCAAAGAATAGCATCCTCACTCAGGCCTCATGTTGTAGAGTGAGGAAACTACGAATCAAAGACAACAAGCAGCCCTCTGCTTAGCTCAGCTCCCAGGAACCATTCTCTTCCCAGAGCACATGTTCTGGAGAGGGCCTGGTTTTCCATCTTCTCTGGGTAAGTTACCCGATAGAGCCTTCGCTGTCAGGCTCTGGCTTCTCTATGTGTGCACTTTTTGCCATTTCTCTGTCTCCTATTCCTGATAATATCGTTTAAGTCAGTTTAGGTGCCAGCCACCTGTCGTTAGTTTCATTTTATTCCTCGATGGATCTTGTCTCTATGATTTTCTCATCAAATTTACTTGTTCAATCTCATTTATCTTTGTTTTCCCCTATCCCGCCTTTTGGCAATAAAGCTCACTGCCTGGCATATAATAGATGATCAATTAATTATTGGTAAATGAGGCAATGGATAGTGATAGATCTTTTATATGTAAGATACTTAAAAATCTTTCTCTTTTTCCCAGAGATCCTCTGATGAAAGCATAACCAGAGGGAGGCTTACACCTCTACTTGCTCACCTTCTCCCCTGCTGAGATGGCCTTTGGAGGCTCTTCCAGTTAATTTGCCTTACATGAC TR:VR 34:10 6:0 chr8 128132743 r_536 A . PASS END=128144667;SVTYPE=DEL;SVLEN=-11924 TR:VR 99:19 17:0 chr10 45205825 d_304 C . PASS END=45205892;SVTYPE=DEL;SVLEN=-67;SVINSLEN=1;SVINSSEQ=A TR:VR 35:3 20:0 chr11 74048144 d_380 G . PASS END=74048947;SVTYPE=DEL;SVLEN=-803 TR:VR 56:18 17:0 chr12 48081525 d_429 A . PASS END=48081602;SVTYPE=DEL;SVLEN=-77 TR:VR 24:15 23:0 chr14 34771950 r_160 T . PASS END=34821648;SVTYPE=DUP;SVLEN=49698 TR:VR 81:14 33:0 chr16 34062745 r_227_0 C [chrY:56843872[TTGATCAGTTCAGAGATGTGTCACAATGCCCATGTAGGCAGAGCCTAGGCAAGAGCTACAACATCTGAGTGATCAATGCAGTGATATGTCACTATGCCCCAATAGGCAGAGCATAGTCAAGTGTTACATCACTTGGGTGATCAGTGCAGAGATAGGTCACAATGCCCACATACACAGAGACTATAAAATATTCTCATCACC . Too_low_VAF SVTYPE=BND;MATEID=r_227_1;SVINSLEN=200;SVINSSEQ=TTGATCAGTTCAGAGATGTGTCACAATGCCCATGTAGGCAGAGCCTAGGCAAGAGCTACAACATCTGAGTGATCAATGCAGTGATATGTCACTATGCCCCAATAGGCAGAGCATAGTCAAGTGTTACATCACTTGGGTGATCAGTGCAGAGATAGGTCACAATGCCCACATACACAGAGACTATAAAATATTCTCATCAC TR:VR 423:8 142:0 chrY 56843872 r_227_1 C [chr16:34062745[GTGATGAGAATATTTTATAGTCTCTGTGTATGTGGGCATTGTGACCTATCTCTGCACTGATCACCCAAGTGATGTAACACTTGACTATGCTCTGCCTATTGGGGCATAGTGACATATCACTGCATTGATCACTCAGATGTTGTAGCTCTTGCCTAGGCTCTGCCTACATGGGCATTGTGACACATCTCTGAACTGATCAAC . Too_low_VAF SVTYPE=BND;MATEID=r_227_0;SVINSLEN=200;SVINSSEQ=GTGATGAGAATATTTTATAGTCTCTGTGTATGTGGGCATTGTGACCTATCTCTGCACTGATCACCCAAGTGATGTAACACTTGACTATGCTCTGCCTATTGGGGCATAGTGACATATCACTGCATTGATCACTCAGATGTTGTAGCTCTTGCCTAGGCTCTGCCTACATGGGCATTGTGACACATCTCTGAACTGATCAA TR:VR 423:8 142:0 chr2 2516534 d_1090 G . Too_small_size END=2516569;SVTYPE=DEL;SVLEN=-35 TR:VR 34:10 16:0 chr20 44214583 r_359_0 T T]chr20:44226751] . PASS SVTYPE=BND;MATEID=r_359_1 TR:VR 69:17 27:0 chr20 44226751 r_359_1 T T]chr20:44214583] . PASS SVTYPE=BND;MATEID=r_359_0 TR:VR 69:17 27:0 chr3 60332689 d_1541 T . Too_small_size END=60332728;SVTYPE=DEL;SVLEN=-39 TR:VR 27:14 18:0 chr4 176065891 d_1742 C . PASS END=176067281;SVTYPE=DEL;SVLEN=-1390 TR:VR 23:15 19:0 chr5 159815063 d_1828 A . PASS END=159815416;SVTYPE=DEL;SVLEN=-353 TR:VR 29:13 16:0 chr6 170496879 i_1427 A . PASS END=170496898;SVTYPE=INS;SVINSLEN=352;SVINSSEQ=CGGGGGTTGGAGGAACTACAGAGCGGTGGTGAAGAGGAGGATGGGGTTGGAGGAACTACAGAGCGGTGGTGAAAAGGAGGACGGGGTTGGAGGAACTACAGACGGTGGTGAAGAGGAGGAGGATGGGGTTGGAGGAACTACAGAGGGGTCGTGAAGAGGAGGATGGGGTTGGAGGAACTACAGAGCGGTGGTAAAAATGAGGATGACAACAGAGGAACCACAGGAGCTGCATGCAGGCATGAGGATGGGGGTTGGAGGAACTACAGAGCAGAGCTGCAGAGGAGGGGAGCTGGCTGGAGGAACCGCAGAAAGCAGCAGCTCCAGGATGGAGGCTGGAGGAACTACACAGCGG TR:VR 58:11 11:0 chrX 18143441 r_576 A . PASS END=18146893;SVTYPE=DUP;SVLEN=3452 TR:VR 65:7 16:0 chr11 74662819 r_97 C . PASS END=74667101;SVTYPE=DUP;SVLEN=4282 TR:VR 70:9 14:0 chr12 51763336 i_281 A . PASS END=51763344;SVTYPE=INS;SVINSLEN=79;SVINSSEQ=TTTGTATAATATAATATACAAATATTATATTATATATATTCAATACTTTATTATATTTGTATAATATAATATAATAAAT TR:VR 27:16 19:0 chr16 34062703 i_499 G . Too_small_size END=34062744;SVTYPE=DEL;SVLEN=-41 TR:VR 212:15 74:1 chr19 36234332 r_281_0 A A]chr9:129442928] . PASS SVTYPE=BND;MATEID=r_281_1 TR:VR 63:4 40:1 chr9 129442928 r_281_1 G G]chr19:36234332] . PASS SVTYPE=BND;MATEID=r_281_0 TR:VR 63:4 40:1 chr2 26333431 r_290_0 A ]chr4:89723827]AGGGAGGGTGAGAAGCAC . PASS SVTYPE=BND;MATEID=r_290_1;SVINSLEN=17;SVINSSEQ=AGGGAGGGTGAGAAGCA TR:VR 47:3 27:0 chr4 89723827 r_290_1 C CTGCTTCTCACCCTCCCT[chr2:26333431[ . PASS SVTYPE=BND;MATEID=r_290_0;SVINSLEN=17;SVINSSEQ=TGCTTCTCACCCTCCCT TR:VR 47:3 27:0 chr20 44214598 r_360_0 A [chr20:44226874[T . PASS SVTYPE=BND;MATEID=r_360_1 TR:VR 69:18 27:0 chr20 44226874 r_360_1 T [chr20:44214598[T . PASS SVTYPE=BND;MATEID=r_360_0 TR:VR 69:18 27:0 chr21 7932926 d_1385 T . Too_low_VAF END=7932943;SVTYPE=INS;SVINSLEN=357;SVINSSEQ=CCATTATATTCGTTTTGGTTCCATTCAATTTCATTCTATTGGATTCCACTCTATTTTACTCCATTCCATTCGATTTCATTCTTTTCGATTCCATTATTTTGGACTCCATTCCTTTTGATTTCATTCTTTTTGATTCCATTCTTTTCGTCTCCATTCCATTCGACTCCATTCCATTCGAGTCCATTCCTTTCCATTCCATTTCATTGCATTCCATTCCATTCTGTTCCATTTTATTCCAATCCTTTTGATACCATTTTGTTCCAGTCCATTCCATTCGAGTCCATTCCATTCCAGTCCATTCCATTCACTTCCATTGCATTCGAGTCTATTCCACTCCAGTCCATTCCTGTCGAGTCC TR:VR 270:7 115:1 chr4 73184444 d_1722 A . PASS END=73184499;SVTYPE=DEL;SVLEN=-55 TR:VR 35:16 21:0 chr6 149298093 r_489 A . PASS END=149302834;SVTYPE=DUP;SVLEN=4741 TR:VR 23:6 8:0 chr8 99303697 d_2023 C . Too_small_size END=99303733;SVTYPE=DEL;SVLEN=-36 TR:VR 56:21 29:0 chr10 47452061 r_71 G . PASS END=47649259;SVTYPE=DUP;SVLEN=197198 TR:VR 89:18 28:0 chr11 74770543 r_98 T . PASS END=74892905;SVTYPE=DEL;SVLEN=-122362 TR:VR 96:14 36:0 chr12 51938596 d_430 A . Too_small_size END=51938638;SVTYPE=DEL;SVLEN=-42;SVINSLEN=1;SVINSSEQ=A TR:VR 18:12 20:0 chr15 101752073 d_790 T . Too_small_size END=101752112;SVTYPE=DEL;SVLEN=-39 TR:VR 53:25 8:0 chr20 45006511 d_1362 T . PASS END=45009469;SVTYPE=DEL;SVLEN=-2958;SVINSLEN=1;SVINSSEQ=G TR:VR 38:16 10:0 chr3 101755149 r_403 G . PASS END=101767740;SVTYPE=DUP;SVLEN=12591 TR:VR 72:7 21:0 chr3 61752795 i_1083 A . PASS END=61752795;SVTYPE=INS;SVINSLEN=271;SVINSSEQ=AAAAAAAGAAAAAGAAAAAAAAAAGAAAATATTTGCCAACTCCTGCTTATAGTTCGAGACCTGCCAACATGGTGAAACCCCATTTCTACTAAAAATACAAAAATTAGCTGGGTGTGGTGGCGGGCACCTATAATCCCAGCTACTCGGGAGGCTGAGGGAAGAGAATTGTTTGAACCTGGGAGGTGGAGGTTGCAGTAAGCTGAAATCGTGCCACTGTATATTCCAGCCTGGGTGATAGAGCAAGACTGTCTCAAAAAAAAAAAAAAAAAGA TR:VR 43:4 12:0 chr4 178005726 r_453 C . PASS END=178006243;SVTYPE=DUP;SVLEN=517 TR:VR 24:3 12:0 chr4 73250717 d_1723 T . PASS END=73251246;SVTYPE=DEL;SVLEN=-529 TR:VR 30:10 15:0 chr6 86631881 r_484 A . PASS END=86690544;SVTYPE=DEL;SVLEN=-58663 TR:VR 24:9 40:0 chr8 99361579 r_527_0 T T]chr8:99404905] . PASS SVTYPE=BND;MATEID=r_527_1 TR:VR 89:20 34:0 chr8 99404905 r_527_1 T T]chr8:99361579] . PASS SVTYPE=BND;MATEID=r_527_0 TR:VR 89:20 34:0 chrX 116154013 r_582 A . PASS END=116157985;SVTYPE=DUP;SVLEN=3972 TR:VR 38:5 20:0 chr1 10043710 d_43 G . PASS END=10050019;SVTYPE=DEL;SVLEN=-6309;SVINSLEN=57;SVINSSEQ=GGCCACTGCGCCCGGCCAACACTTTCTAAAATCTTGACCACACCCGGAATCCCAGCC TR:VR 51:10 23:0 chr1 143497360 i_55 T . PASS END=143497360;SVTYPE=INS;SVINSLEN=279;SVINSSEQ=CGGCTTTTTACCCGCCGTGGCTTTTTCCCCCCCGCCGCCGCGGACGCGTTTCCACCGCCGCGGCACCCGCGACCCGCGCCGCGGCTTTTTGTCCCCCGCCGCCGCTTTTTACCCCGCCGCCGCGGCACCGCCTGTCGCCGTGGTTTTTTGCCCCCCACCCCGCCGCGGCTTTTTGCCCGCCGCGGCGATCGCCTGCCCGCGCGCCGCCGCTTTTTTGCCCGCCCTGCCCCGCCGCCGCGGCGCACCCCGCCGCCATCCGCGGCTGTTTTTGCCAGTCGC TR:VR 81:6 35:1 chr11 75908931 r_99_0 T ]chrX:11490209]A . PASS SVTYPE=BND;MATEID=r_99_1 TR:VR 106:10 38:0 chrX 11490209 r_99_1 A A[chr11:75908931[ . PASS SVTYPE=BND;MATEID=r_99_0 TR:VR 106:10 38:0 chr12 17674269 d_414 G . PASS END=17674514;SVTYPE=DEL;SVLEN=-245 TR:VR 37:16 25:0 chr12 52192123 r_126 A . PASS END=52302168;SVTYPE=DEL;SVLEN=-110045 TR:VR 32:10 18:0 chr13 56665090 r_148 T . PASS END=56697755;SVTYPE=DUP;SVLEN=32665 TR:VR 49:11 30:0 chr3 101916352 d_1552 G . PASS END=101916466;SVTYPE=DEL;SVLEN=-114 TR:VR 36:10 17:0 chr4 179542538 i_1248 C . PASS END=179542540;SVTYPE=INS;SVINSLEN=75;SVINSSEQ=CAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA TR:VR 18:9 17:0 chr7 158147653 i_1488 A . PASS END=158147654;SVTYPE=INS;SVINSLEN=3969;SVINSSEQ=CGCCGCGTGTCTTTCCCCCTCAATAAGCACCCCATCTCACGCCACGTGTCTTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCACTGACACCCCATCTCACGCCACGTGTCTTTCCCCCCTCAATGACACCCCATCTCACGCCCACGTGTCATTCCCCCTCACTGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCTTCAATGACATGCCCCATCTCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCATTCCCCCTCACCCCGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCACTGACACCCCATCTCATCGCCACACGTCTTTCCCCCTCACTGAAACCCCATCTCACGCCCGTGTCTTTCCCCCTCAATGACACACCCCATCTCCGCCACGTGTCATTCCCCCTCAATGACACCCCATCTCACGCCACACGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCTTCAATGACACCCCATCTCACGCCACGTGTCTTTTCCCCCTCACTGACACCCAATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGCCCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCACACTGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCCGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCTTCAATGACACCCCATGTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCAGGTGTCTTTCCCCTCCAGCTGACACCCCATCTCCGCCAGGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACACGTCTTTCCCCCTCACTGACACCCCATCTCACGCCACACGTCTTTCCCCCTCACTGACACCCCCCATCTCACGCCACACGTCTTTCCCCCTCACTGACACCCCATCTCACGCCACGTATCTTTCCCCCTCAATGACACCCCCATCTCACGCCACGTGTCATTTCCCCCTCACCCTGACACCCCATCTCCCACGCCACGTGTCATTCCCCCTTCAATGACACCCCATCTCACGCCACTTGTCTTTCCCCCTCACTGACACCCCATCTCACGCCACGTGTCTTTTCCCCCTCAATGACACCCCATCTCACGCCACACGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACACGTCTTTCCCCCTCAGCTGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCCGTGTCTTTCCCCTTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCCACGCCACGTGTCTTTCCCCTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCTTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCCCTCACTGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACACGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCACTGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCATTCCCCCTCACTGACACCCCATTTCACGCCACGTGTCTTTTTCCCCCTCAATGACACCCCATCTCACGCCCGTGTCTTTTCCCCTTCAATGACACCCCATCTCATGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCATTCCCCCTCACCTGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCAAGCGAGCACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCACTGACACCCCATCTCCCATGCCACACGTCTTTCCCCCTCACTGAAACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCATTCCCCCTCCACTGACACCCCATCTCACGCCACACGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACACGTCTTTCCCCCTCACTGACACCCCATCTCACGCCACACGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCATTCCCCCTCACTGACACCCCATCTCACGCCCGTATCTTTCCCCCTCAATGACACCCCATCTCACGCCGCGTGTCATTCCCCCTCACACTGACACCCCATCTCACGCCACGTGTCATTCCCCCTTCAATGACACCCCATCTCACGCCACTTGTCTTTCCCCCTCACTGACACCCCATCTCACGCCACCGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACACGTCTTTCCCCCTCAATGACACCCATCTCACGCCACACGTCTTTCCCCCTCACTGACACCCCCATCTCACGCCACATGTCTTTCCCCCTCAATGACACCCCCATCTCCGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCCATCTCACGCCGCGTGTGTCTTTCCCCCTCAATGACACCCCATCTCCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCCGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCCTTTCCCCCCTCAATGACACCCATCTCCCGCCACACGTCTTTCCCCCTCAATGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCACTGACACCCCATCTCATACCACGTGTCTTTCCCCCCTCACTGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCACTGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCAATGACACCCCATCTCACGCCAGGTGTCTTTCCTCCTCAGTGACACCACCCCATCTCACGCCACGAGTCTTTCCCCCTCAGTGACACCCCATCTCACGCCACGAGTCTTTCCCCCTCAGTGACACCCCATCTCACGCCACGTGTCTTTCCCCCTCACTGACACCCCATCTCACGCCACGTGTCTTTCCCCTTCAATGACACCCCATCTCCATGCCACGTGTCTTTCCCCCTCACCGACACCCCATCTCATGCCACGTGTCTTTCCCCCTCACCCGACACCCCATCTCACGCCACGTGTCTTCCCCCTCAATGACACCCCATCTCCCGCCACGTGTCTTTCCCCTTCAATGACACCCCATCTCATGCCACACGTCTTTCCCCCTCAATGACACCCCATCTCATGCCACGTGTCTTTCCCCCTCACCTGACACCCCATCTCACGCCACAGGTCTTTCCCCTCACTGACACCCCATCTCACGCCACACGTCTTTCCCCTCTCACATGACACCCCATCTCTCACG TR:VR 60:3 24:0 chr8 99370797 r_528_0 A [chr8:99425728[A . PASS SVTYPE=BND;MATEID=r_528_1 TR:VR 80:18 35:0 chr8 99425728 r_528_1 A [chr8:99370797[A . PASS SVTYPE=BND;MATEID=r_528_0 TR:VR 80:18 35:0 chr1 10047005 d_44 G . PASS END=10050019;SVTYPE=DEL;SVLEN=-3014;SVINSLEN=191;SVINSSEQ=CGCCACCATACCCGGCTAATTTTGTATTTTTAGTAGCGACGGGGTTTCTCCATGTTGGTCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCTGCCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGGGCCACTGCGCCCGGCCAACACTTTCTAAAATCTTGACCACACCCGGAATCCCAGCC TR:VR 45:10 20:0 chr10 39379839 d_261 C . Too_small_size END=39379878;SVTYPE=DEL;SVLEN=-39 TR:VR 33:5 14:0 chr12 5547763 r_119 G . PASS END=5575300;SVTYPE=DUP;SVLEN=27537 TR:VR 73:14 34:0 chr13 63765059 d_471 A . PASS END=63765252;SVTYPE=DEL;SVLEN=-193 TR:VR 14:5 9:0 chr14 45834130 d_500 T . PASS END=45834182;SVTYPE=DEL;SVLEN=-52 TR:VR 27:13 11:0 chr15 65747992 d_772 A . PASS END=65748079;SVTYPE=DEL;SVLEN=-87 TR:VR 35:19 12:0 chr18 80258565 r_262_0 G GAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGGTGAGGGTGAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTGAGGGTTAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGGTGAGGG[chr19:6982560[ . Too_low_VAF SVTYPE=BND;MATEID=r_262_1;SVINSLEN=168;SVINSSEQ=AGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGGTGAGGGTGAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTGAGGGTTAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGGTGAGGG TR:VR 139:4 76:0 chr19 6982560 r_262_1 T ]chr18:80258565]CCCTCACCCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACCCTAACCCTCACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTCACCCTCACCCCTCACCCTCACCCTCACCCTCACCCTCACCCTT . Too_low_VAF SVTYPE=BND;MATEID=r_262_0;SVINSLEN=168;SVINSSEQ=CCCTCACCCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACCCTAACCCTCACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTCACCCTCACCCCTCACCCTCACCCTCACCCTCACCCTCACCCT TR:VR 139:4 76:0 chr19 38647152 r_282_0 C C]chr3:40714825] . PASS SVTYPE=BND;MATEID=r_282_1 TR:VR 62:9 28:0 chr3 40714825 r_282_1 G G]chr19:38647152] . PASS SVTYPE=BND;MATEID=r_282_0 TR:VR 62:9 28:0 chr2 30443739 r_291 C . PASS END=47853993;SVTYPE=DUP;SVLEN=17410254 TR:VR 95:20 23:0 chr20 45900130 d_1363 A . PASS END=45900179;SVTYPE=DEL;SVLEN=-49 TR:VR 39:13 11:0 chr22 17876831 i_1016 G . PASS END=17876831;SVTYPE=INS;SVINSLEN=882;SVINSSEQ=AGGTTAGGGAGGTTGGTGGAGGTTAGGGGAGGTTAGGGAAGTTAGGGAGGTTATGGAGGTGAGGGAGGTTATGGAGGTGAGGGAGGTTATGGAGGTTAGGGAGGTGAGGGAGGTTATGGAGGTTAGGGAGGTTATGGAGTTAGGGAGGTTAGGGAGGTTATGGAGGTTAGGGAAGTTAGGAGGTTATGGAGGTGAGGGAGGTTATGGAGGTTAGGGAGGTTAGGGAGATTATGGAGGTTCGGGAGGTTGGGTGGAGGTTAGTGGAGGTTAGGGGAGGTTATGGAGGTGAGGGAGGTTATGGGAGGTTAGGAGGTTATGGAGGTTAGGGGAGGTTATGGAGGTGAGGGAGGTTATGGAGGTTAGGGGGAGGTTAGGGAGGGTGAGGGATGGAGGTTATGGAGGTTAGAGGAGGGAGATTATGGAGGTTAGGGAGGTTAAGGAGGTTAGGGAGCTTATGGAGGTTAGGGGGGGTTAAAGGTGGAGGTTAGGGAAGTTATGGAGGTTAGGGAGGTTAGGGAGGTTAGGGAAGTTATGGAGGTTATGGCGGTTATGGAGGTTAGGGAGATTATGGAGGTTATGGGAAGTTATGGAGGTTATGGAGGTTAGGGGAGGTTATGGAGGTTAGGGAGGTTATGGAGGTGAGGGAGGTTATGGAGGTTAGGGGAGGGTGAGGGAGGTTATGGAGGTTAGGGGGAGGTTGTGGAGGTTAGGGAGGTTATGAGGGGAGGTTATGGAGGTTATGGAGGTTAGAGGGAGGTTATGGAGGTTAGGAGGTTAGGGGAGGTGAGGGAGGTTATGGAGGTGAGGGAGGTTATGTGGAGGTGAGGGGGTTATGGAGGTTAGGGAGGTGAAGGAGGTTATGGAGGGTTAGGAGGTTATGGA TR:VR 51:8 13:0 chr3 65538881 r_395 G . PASS END=65540771;SVTYPE=DUP;SVLEN=1890 TR:VR 30:5 20:0 chr8 143988439 i_1570 C . Too_low_VAF END=143988440;SVTYPE=INS;SVINSLEN=106;SVINSSEQ=GCGCCCAGCCCCTTACTCTGTTTTTAAAGCAGATTTAACATAAATCTAAAAACACTTAGGGACTCTGCCTACATGACCCCTCCTGAAGCCCTTTACTCAACTTTGT TR:VR 61:3 17:0 chr8 99426000 r_529 C . PASS END=99427939;SVTYPE=DEL;SVLEN=-1939 TR:VR 54:17 22:0 chrX 121115067 r_583 A . PASS END=121147632;SVTYPE=DUP;SVLEN=32565 TR:VR 69:16 15:0 chr1 10047780 d_45 C . PASS END=10050019;SVTYPE=DEL;SVLEN=-2239;SVINSLEN=51;SVINSSEQ=TGCGCCCGGCCAACACTTTCTAAAATCTTGACCACACCCGGAATCCCAGCC TR:VR 46:10 19:0 chr1 214168939 r_51 A . PASS END=214195110;SVTYPE=DUP;SVLEN=26171;SVINSLEN=1;SVINSSEQ=T TR:VR 80:10 28:0 chr10 39534402 i_155 A . PASS END=39534403;SVTYPE=INS;SVINSLEN=682;SVINSSEQ=AATTCTCTTTTCATAGAGCAGTTTTGATACACTTTTTTTTTAGAATCTGCAAGGGGACATTTGGAGCGACGTGAGGGCTATGGTTGAATTGGAAATATATTCATATAAAAACCACACAGAAGCATTCTCAGAAACTTCTTTGTGATGTTTGCATTCAATTCACAGAGTTGAAACTTCCTTTTGATAGAGTAGTTTTGTAACACTCTTTTTGTAGAATGTGCAAGTAGATATGTGGACCGCTTTGAGGTCTTTGTTGGAAACGGGAATATCTTCACCTAAAAAGTAGACATAAGAATTCTCAGAATTTCTTTTTGATGGGTGCATTCAACTAACAGAGTTGAACCTTCCTTTTGATAGCACAGCTTTTAAATGCTCTTTTTGTAGAATCTGCAAGTGGACATTTGGAGGACTTTGAGTGCTAGTGTAGTAAAGGAAATATCTTCACCTAAAAACTAGACATAAGCATTATCAGAAATTTCTTTGTGATGTGTCCATTCAACTCAGAGTTGACCTTTCTTTTGATAGAGTAGTTTTGAAGCACTCTTTTTGTAGAATCTGCAAGTGAATATTTGTAGCCCTTTGAGGCCCATGGTACAAAGGGAAATTTCTTCATATAAAAACTAGAAAGAAGCATTCTCAGAAAATACATTGTGATGTGTGCCTTCATTTCACAGAGTTTAAC TR:VR 49:6 18:0 chr11 78500261 r_100_0 A A]chr11:78502183] . Too_low_VAF SVTYPE=BND;MATEID=r_100_1 TR:VR 62:3 12:0 chr11 78502183 r_100_1 T T]chr11:78500261] . Too_low_VAF SVTYPE=BND;MATEID=r_100_0 TR:VR 62:3 12:0 chr12 55531895 d_431 T . PASS END=55532247;SVTYPE=DEL;SVLEN=-352 TR:VR 27:17 9:0 chr13 72890895 d_472 T . PASS END=72892653;SVTYPE=DEL;SVLEN=-1758 TR:VR 17:12 13:0 chr17_KI270730v1_random 99871 d_999 A . Too_low_VAF END=101923;SVTYPE=DEL;SVLEN=-2052 TR:VR 191:3 105:1 chr19 38647287 r_283_0 G [chr3:40714846[C . PASS SVTYPE=BND;MATEID=r_283_1 TR:VR 62:20 28:0 chr3 40714846 r_283_1 C [chr19:38647287[C . PASS SVTYPE=BND;MATEID=r_283_0 TR:VR 62:20 28:0 chr2 31463325 r_292_0 T T]chr2:236411645] . PASS SVTYPE=BND;MATEID=r_292_1 TR:VR 82:27 35:0 chr2 236411645 r_292_1 C C]chr2:31463325] . PASS SVTYPE=BND;MATEID=r_292_0 TR:VR 82:27 35:0 chr20 46043974 r_361 G . PASS END=46060474;SVTYPE=DUP;SVLEN=16500 TR:VR 65:13 15:0 chr3 66483799 d_1542 A . PASS END=66483849;SVTYPE=DEL;SVLEN=-50 TR:VR 37:15 10:0 chr4 74902165 r_442 A . PASS END=74953259;SVTYPE=DUP;SVLEN=51094 TR:VR 84:12 27:0 chr6 24118089 i_1360 T . PASS END=24118089;SVTYPE=INS;SVINSLEN=228;SVINSSEQ=AAAGAATTATTCCTCCTCGGAATCAGCTGCTGGGCGGCGAGACCAAGCCATGTGTGTTTCTCTGCTCATGCACTGCTATCTTCAGAGGACTCCTCCTGTCCCGCGAAGGCTTGTCTTGAAAATTGGGCCCTGGAATAAAGGCTGAGAACGTAACCTTCTGAATAAACTCAGTGGCTCACTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA TR:VR 45:16 17:0 chr6 99916443 r_485 T . PASS END=99932019;SVTYPE=DUP;SVLEN=15576 TR:VR 34:10 24:0 chr8 144094981 r_543 C . PASS END=144196830;SVTYPE=DUP;SVLEN=101849 TR:VR 118:16 28:0 chr8 99634480 d_2024 G . Too_small_size END=99634516;SVTYPE=DEL;SVLEN=-36 TR:VR 71:12 16:0 chr1 10050488 d_46 A . PASS END=10050557;SVTYPE=DEL;SVLEN=-69 TR:VR 44:19 19:0 chr1 217649711 d_210 T . Too_small_size END=217649753;SVTYPE=DEL;SVLEN=-42 TR:VR 37:17 19:0 chr1 39664529 r_13_0 T TCCTC]chr12:26566580] . Too_low_VAF SVTYPE=BND;MATEID=r_13_1;SVINSLEN=4;SVINSSEQ=CCTC TR:VR 129:3 35:0 chr12 26566580 r_13_1 A AGAGG]chr1:39664529] . Too_low_VAF SVTYPE=BND;MATEID=r_13_0;SVINSLEN=4;SVINSSEQ=GAGG TR:VR 129:3 35:0 chr10 127848087 i_183 G . PASS END=127848087;SVTYPE=INS;SVINSLEN=53;SVINSSEQ=AAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA TR:VR 23:6 15:0 chr12 55532428 i_282 T . PASS END=55532434;SVTYPE=INS;SVINSLEN=70;SVINSSEQ=AAGAGTTGTGAGACAGAAGCATCTGGTAACCTATAAATGAAAAAGTATCAGATTAATAGCAGATTTCTCA TR:VR 27:17 9:0 chr14 51023885 r_161 A . PASS END=51035923;SVTYPE=DUP;SVLEN=12038 TR:VR 59:12 21:0 chr18 10026 r_252_0 C [chr20:2603913[AG . PASS SVTYPE=BND;MATEID=r_252_1;SVINSLEN=1;SVINSSEQ=A TR:VR 194:11 36:0 chr20 2603913 r_252_1 G [chr18:10026[TG . PASS SVTYPE=BND;MATEID=r_252_0;SVINSLEN=1;SVINSSEQ=T TR:VR 194:11 36:0 chr2 91515295 d_1209 C . Too_low_VAF END=91515390;SVTYPE=DEL;SVLEN=-95 TR:VR 274:6 75:1 chr20 47023901 i_887 G . PASS END=47023901;SVTYPE=INS;SVINSLEN=106;SVINSSEQ=GGCTGGGATTATAGGTATGAGCCACTGCACTTGGCCTGTTTTTAAGTCTCCCTACAACACAGAGTTCACTGGAAGGGGAGTTTATGTGGATGCAGACAGGCATGAT TR:VR 45:14 12:0 chr21 9706943 d_1418 T . PASS END=9711970;SVTYPE=DEL;SVLEN=-5027 TR:VR 72:4 44:1 chr3 192552897 r_431 A . PASS END=192559265;SVTYPE=DUP;SVLEN=6368 TR:VR 70:10 15:0 chr6 25604619 r_473 A . PASS END=27507477;SVTYPE=DEL;SVLEN=-1902858 TR:VR 65:17 24:0 chr9 100018339 r_553 A . PASS END=100113799;SVTYPE=DUP;SVLEN=95460;SVINSLEN=11;SVINSSEQ=TAGTTATAGTC TR:VR 105:33 26:0 chr9 41766478 d_2080 G . PASS END=41766740;SVTYPE=DEL;SVLEN=-262 TR:VR 53:12 25:0 chr1 218619685 r_52 G . PASS END=218684806;SVTYPE=DUP;SVLEN=65121 TR:VR 85:7 28:0 chr10 128239471 r_85 T . PASS END=128242429;SVTYPE=DUP;SVLEN=2958 TR:VR 26:4 14:0 chr12 23091941 d_415 A . PASS END=23092774;SVTYPE=DEL;SVLEN=-833;SVINSLEN=1;SVINSSEQ=C TR:VR 46:24 17:0 chr12 55533145 i_283 T . PASS END=55533148;SVTYPE=INS;SVINSLEN=320;SVINSSEQ=GGAAATCATCATTCTCAGTAAACTATTGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATAAGAACACATGGACACAGGAAAGGGAACATCACACTCTGGGGACTGTTGTGGGGGGAGGGGGGAGGGATAGCTTTAGGAGATATACCTAATGCTAAATGATGAGTTAATGGGTGCAGCACACCAGCATGGCACATGTATACATATGTAACTAACCTGCACATTGTGCACATGTACCCTAAAACTTAAAGTATAATAATAATAAAATAAAATAAAAATAAAAACAAAACGATTACCA TR:VR 27:16 9:0 chr13 78846488 r_149 G . PASS END=78866116;SVTYPE=DEL;SVLEN=-19628;SVINSLEN=2;SVINSSEQ=GG TR:VR 17:12 31:0 chr14 52053910 r_162 T . PASS END=52056791;SVTYPE=DUP;SVLEN=2881 TR:VR 50:8 10:0 chr15 71514615 r_199 T . PASS END=71580561;SVTYPE=DUP;SVLEN=65946 TR:VR 70:9 32:0 chr16 34097616 r_228_0 T ]chrY:11316379]TTCCACTCCACTCCACTCCACAACATTCCATCCCATTCCACT . Too_low_VAF SVTYPE=BND;MATEID=r_228_1;SVINSLEN=41;SVINSSEQ=TTCCACTCCACTCCACTCCACAACATTCCATCCCATTCCAC TR:VR 580:6 443:0 chrY 11316379 r_228_1 T TGTGGAATGGGATGGAATGTTGTGGAGTGGAGTGGAGTGGAA[chr16:34097616[ . Too_low_VAF SVTYPE=BND;MATEID=r_228_0;SVINSLEN=41;SVINSSEQ=GTGGAATGGGATGGAATGTTGTGGAGTGGAGTGGAGTGGAA TR:VR 580:6 443:0 chr19 44088247 r_284 G . PASS END=44109917;SVTYPE=DEL;SVLEN=-21670 TR:VR 29:15 23:0 chr2 135117615 i_828 G . PASS END=135117615;SVTYPE=INS;SVINSLEN=241;SVINSSEQ=CTTCTTCTTCTTCTTCTGCTTCTTCTGCTTCTTCTTCTTCTTCTGCTTCTTCTGCTTCTTCTTCTTCTGCTTCTTCTTCTGCTTCTTCTGCTTCTTCTTCTTCTTCTTCTGCTTCTTCTGCTTCTTCTTCTTCTGCTTCTTCTTCTTCTTCTGCTTCTGCTTCTTCTTCTTCTTCTTCTTCTTCTGCTTCTTCTTCTGCTTCTTCTGCTTCTTCTGTTTCTTCTTCTGCTTCTTCTGCTTC TR:VR 53:4 17:0 chr20 49772721 d_1364 C . PASS END=49773110;SVTYPE=DEL;SVLEN=-389 TR:VR 39:13 20:0 chr22 10691589 r_379_0 A ]chrUn_KI270746v1:14193]C . Too_low_VAF SVTYPE=BND;MATEID=r_379_1 TR:VR 178:6 48:1 chrUn_KI270746v1 14193 r_379_1 C C[chr22:10691589[ . Too_low_VAF SVTYPE=BND;MATEID=r_379_0 TR:VR 178:6 48:1 chr4 77783790 d_1725 C . PASS END=77783931;SVTYPE=DEL;SVLEN=-141 TR:VR 33:14 16:0 chr6 159781363 r_490 A . PASS END=159936943;SVTYPE=DUP;SVLEN=155580 TR:VR 49:13 29:0 chrX 122357414 d_2299 A . PASS END=122357586;SVTYPE=DEL;SVLEN=-172 TR:VR 35:12 10:0 chr1 108070972 d_69 A . PASS END=108071023;SVTYPE=DEL;SVLEN=-51;SVINSLEN=3;SVINSSEQ=AAA TR:VR 36:19 11:0 chr10 54577898 d_306 T . PASS END=54578462;SVTYPE=DEL;SVLEN=-564 TR:VR 41:14 12:0 chr11 21396870 d_349 G . PASS END=21397474;SVTYPE=DEL;SVLEN=-604 TR:VR 23:12 6:0 chr12 23259924 d_416 T . Too_small_size END=23259962;SVTYPE=DEL;SVLEN=-38 TR:VR 23:11 17:0 chr12 55533642 i_285 A . Too_small_size END=55533642;SVTYPE=INS;SVINSLEN=48;SVINSSEQ=AGATAAAATTTATAGCCCTAAACACCTACATCAAAAAGACTGAAACAG TR:VR 25:15 9:0 chr15 72111513 i_450 A . PASS END=72111582;SVTYPE=INS;SVINSLEN=252;SVINSSEQ=TAAATAAATAAAGATTGGTTCAGTCGCCACAGGTTATTAAAACACGCCTCCAGTCCTAAATGATGACCAATCATTTCTTTTTTTTTTTTTTCATTCTTGTTGCCCAGGCTGGAGTGCAAATGGTGTGATCTTGGCTCACTGCAACCTCTGCCTCCCGGGTTCAAGCGATTTTCCTGCCTCAGCCTCCCTAGTAGCTGAAATTACAGGTGCCCGCCACCACGCCCAGCAAATTTTTTGTATTTTTAGTAGAGA TR:VR 65:18 13:0 chr16 34097873 i_501 C . PASS END=34097907;SVTYPE=INS;SVINSLEN=96;SVINSSEQ=TTTCTTTCATGCTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTATTAGTACCAAAACAGAGATATAGACCAATGGA TR:VR 101:18 32:0 chr17 31213179 r_245 A . PASS END=31281289;SVTYPE=DUP;SVLEN=68110 TR:VR 53:8 33:0 chr17_GL000205v2_random 18895 d_976 A . Too_small_size;Too_low_VAF END=18848;SVTYPE=INS;SVINSLEN=1;SVINSSEQ=T TR:VR 185:4 78:1 chr19 44490096 i_694 G . PASS END=44490096;SVTYPE=INS;SVINSLEN=75;SVINSSEQ=AAAGGGAAGGGAAGGGAAAGAGCGAAAGGAAGGGAAAGAAAGAGGGAGAGGAAGGGAAAGAGAGAGAAGGGGAAA TR:VR 33:4 17:0 chr22 10715706 i_999 G . Too_low_VAF END=10715706;SVTYPE=INS;SVINSLEN=424;SVINSSEQ=ATAACTTAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCACTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAATGTGGCACATATACACCATGGAA TR:VR 206:10 69:0 chr3 133257311 i_1111 A . PASS END=133257311;SVTYPE=INS;SVINSLEN=64;SVINSSEQ=TTCATCAAAGTAATTTGTCTATGTTGCTGTGGACAGATTACATTCTTATTCACTCTCTGAAAGT TR:VR 71:5 11:0 chr3 194086047 d_1590 A . PASS END=194086109;SVTYPE=DEL;SVLEN=-62 TR:VR 53:20 12:0 chr3 6867498 r_390 C . PASS END=6873322;SVTYPE=DUP;SVLEN=5824 TR:VR 56:14 12:0 chr4 81884375 r_443 A . PASS END=81891437;SVTYPE=DUP;SVLEN=7062 TR:VR 48:5 15:0 chr7 62281151 d_1951 C . Too_small_size END=62281188;SVTYPE=DEL;SVLEN=-37;SVINSLEN=1;SVINSSEQ=A TR:VR 54:10 20:0 chr8 144125916 i_1573 G . PASS END=144125916;SVTYPE=INS;SVINSLEN=479;SVINSSEQ=GAATATTCTACAGGACAGCCTCAGTGGGGGAGGAATATTCTACCGGACAGCCCGCGGCGGGGAATATTCTACCGGACAGCCCGCGGTGGAGGAATATTGTACCGGACAGCCCGCGGTGAGGAGGAGCGAGATCGCCGCCGGACAGCCCGCGGTGGAGGAATATTGTACCGGACGGCCCGCGGTGAGGGAGGAATATTGCACCGGACAGCCCCGCGGTGGAGGAATATTGTACACCGGACGAAAACGCCCTTCGGTGGAGGAAATATTGTACCGGGACCGCCCGCGGTGGAGGGGAATATTCTACCGGACGGCCCCGCGGTGGAGGAATATTCTGCACGGACGGCCCTCGGTGTGAGGGAATATCTGCCCGGACAGCCCGCGGTGGAGGGAATATTCTACCGGACGGCCCGCGGTGGAAGAATATTGTACCGGACAGCCCGCGGTGAGGGAACATTCTGCCCGGACAGCCCGCGGTGGAG TR:VR 98:7 19:0 chrX 64158238 i_1801 A . PASS END=64158238;SVTYPE=INS;SVINSLEN=242;SVINSSEQ=TTTATGTTTATTTTGCCAAGGTTAAGGACATGCCTGGGAGACAAGTCTATGCCTTTATCCAAAGATGATTTGGGGGGCTTCGATATTTAAAGGAGAAAAGCAGGCTAGAAGGGAAAGTGGGAGGCTATGGTCACATTATTGAATCTGCATGTTGCAAGAGAAGAGGAGCAGGTAGGGGAATAGTCAGTTATGTATTACTCTCTCATGCTCAGTAAATCTGCACTTTACATAAACATAAATTG TR:VR 36:13 15:0 chr1 109233382 r_28 G . PASS END=109481306;SVTYPE=DUP;SVLEN=247924 TR:VR 108:23 18:0 chr1 39797203 d_53 G . PASS END=39804459;SVTYPE=DEL;SVLEN=-7256;SVINSLEN=173;SVINSSEQ=GGCGCCCGGCCCCCACCAATTCTTTTTTTTTTTTTTTTGAGATGGAGTCTTGCTCTCTTGCCCAGGCTGGGTGCAATGGCAAAATCTTGGTTCACTGCAACCTCTGCCTCCCAGGTTCAAGGGACTTGGAGGCATCCCTGCCTCCTGCCTCAGCCTTCCGAGTAGCTGGGATT TR:VR 72:6 21:0 chr11 27522551 r_88_0 G ]chr6:45344477]T . PASS SVTYPE=BND;MATEID=r_88_1 TR:VR 64:11 40:0 chr6 45344477 r_88_1 T T[chr11:27522551[ . PASS SVTYPE=BND;MATEID=r_88_0 TR:VR 64:11 40:0 chr11 84255393 d_381 G . Too_small_size END=84255435;SVTYPE=DEL;SVLEN=-42 TR:VR 29:10 9:0 chr12 2447943 r_116 T . PASS END=2486462;SVTYPE=DUP;SVLEN=38519 TR:VR 82:10 27:0 chr12 55533642 i_284 A . Too_small_size END=55533642;SVTYPE=INS;SVINSLEN=49;SVINSSEQ=AGATAAAATTTATAGCCCTAAACACCTACATCAAAAAGACCAGAAACAG TR:VR 25:14 9:0 chr14 55036573 d_502 A . PASS END=55046039;SVTYPE=DEL;SVLEN=-9466 TR:VR 43:19 22:0 chr15 72111585 r_200 A . PASS END=72193407;SVTYPE=DUP;SVLEN=81822 TR:VR 108:18 27:0 chr16 34098032 r_229_0 C CCAGTCCACTCCATTCCAATCCATTCCATTCCATTCCTTTCTTTCATGCTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTATTAGTACCAAAACAGAGATATAGACCAATGGATCTCACTCTGTCACAGGGGCTGGAGTGCTGTGGCACAATCTCAGCTCACATTTCTTTTCACCATTCAATTACGTTCCATTCCATCCCATTCCATTCCTCT]chr21:9084001] . Too_low_VAF SVTYPE=BND;MATEID=r_229_1;SVINSLEN=232;SVINSSEQ=CAGTCCACTCCATTCCAATCCATTCCATTCCATTCCTTTCTTTCATGCTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTATTAGTACCAAAACAGAGATATAGACCAATGGATCTCACTCTGTCACAGGGGCTGGAGTGCTGTGGCACAATCTCAGCTCACATTTCTTTTCACCATTCAATTACGTTCCATTCCATCCCATTCCATTCCTCT TR:VR 119:4 47:0 chr21 9084001 r_229_1 G GAGAGGAATGGAATGGGATGGAATGGAACGTAATTGAATGGTGAAAAGAAATGTGAGCTGAGATTGTGCCACAGCACTCCAGCCCCTGTGACAGAGTGAGATCCATTGGTCTATATCTCTGTTTTGGTACTAATACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGCATGAAAGAAAGGAATGGAATGGAATGGATTGGAATGGAGTGGACTG]chr16:34098032] . Too_low_VAF SVTYPE=BND;MATEID=r_229_0;SVINSLEN=232;SVINSSEQ=AGAGGAATGGAATGGGATGGAATGGAACGTAATTGAATGGTGAAAAGAAATGTGAGCTGAGATTGTGCCACAGCACTCCAGCCCCTGTGACAGAGTGAGATCCATTGGTCTATATCTCTGTTTTGGTACTAATACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGCATGAAAGAAAGGAATGGAATGGAATGGATTGGAATGGAGTGGACTG TR:VR 119:4 47:0 chr17 32435897 d_949 G . PASS END=32435945;SVTYPE=DEL;SVLEN=-48 TR:VR 15:10 8:0 chr20 28782492 d_1324 A . PASS END=28782606;SVTYPE=INS;SVINSLEN=116;SVINSSEQ=CAGTAGGTCTAAAAGCGCTCCAAATATCCACTTGCAGATTCTACAAAAAGAGTGTTTCAAAAGTTCTCAATCAAAAGAAACTTTCATCTCTGTGGGATGAATGCACACATCACAAA TR:VR 217:11 99:1 chr20 53563667 i_889 T . Too_small_size END=53563667;SVTYPE=INS;SVINSLEN=38;SVINSSEQ=CCCCTCCCCTCCCTTCCCCTCCCTTCCCCTTCCCTTCC TR:VR 40:8 6:0 chr3 72534997 r_396 T . PASS END=72543390;SVTYPE=DUP;SVLEN=8393 TR:VR 51:6 17:0 chr4 49286134 d_1682 G . Too_low_VAF END=49286220;SVTYPE=INS;SVINSLEN=87;SVINSSEQ=AGTCCCAGGGGGCTGGGGGTGAAGACATGAGAGAGACTGGGGAGTAACTCAGTGAAACTGCTGGAGTTTGTAGGTAATTCCTGGGTG TR:VR 660:5 380:1 chr6 29905693 d_1846 T . PASS END=29905752;SVTYPE=DEL;SVLEN=-59 TR:VR 28:3 14:0 chr9 102311386 r_554_0 A A]chrX:121266953] . Too_low_VAF SVTYPE=BND;MATEID=r_554_1 TR:VR 86:3 36:0 chrX 121266953 r_554_1 A A]chr9:102311386] . Too_low_VAF SVTYPE=BND;MATEID=r_554_0 TR:VR 86:3 36:0 chrX 64824127 d_2286 G . Too_small_size END=64824164;SVTYPE=DEL;SVLEN=-37 TR:VR 46:19 14:0 chrY 11309099 d_2335 T . Too_low_VAF END=11309248;SVTYPE=DEL;SVLEN=-149;SVINSLEN=13;SVINSSEQ=CAGGCAATGAGTT TR:VR 729:7 311:1 chr1 110515812 r_29 G . PASS END=110543587;SVTYPE=DUP;SVLEN=27775;SVINSLEN=4;SVINSSEQ=TGCC TR:VR 72:10 24:0 chr1 40293053 r_15_0 G ]chr15:95859337]A . PASS SVTYPE=BND;MATEID=r_15_1 TR:VR 99:12 28:0 chr15 95859337 r_15_1 A A[chr1:40293053[ . PASS SVTYPE=BND;MATEID=r_15_0 TR:VR 99:12 28:0 chr10 56894028 r_72 T . PASS END=56978640;SVTYPE=DEL;SVLEN=-84612 TR:VR 69:14 34:0 chr11 27876515 r_89 A . PASS END=28072394;SVTYPE=DUP;SVLEN=195879 TR:VR 78:15 27:0 chr11 87070485 r_101 T . PASS END=87159554;SVTYPE=DUP;SVLEN=89069 TR:VR 90:12 38:0 chr12 55605606 r_127_0 G ]chr6:135352886]C . PASS SVTYPE=BND;MATEID=r_127_1 TR:VR 60:17 21:0 chr6 135352886 r_127_1 C C[chr12:55605606[ . PASS SVTYPE=BND;MATEID=r_127_0 TR:VR 60:17 21:0 chr13 85586117 r_150 G . PASS END=85591464;SVTYPE=DUP;SVLEN=5347;SVINSLEN=1;SVINSSEQ=T TR:VR 24:3 15:0 chr16 34098032 r_230_0 C CCAGTCCACTCCATTCCAATCCATTCCATTCCATTCCTTTCTTTCATGCTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTATTAGTACCAAAACAGAGATATAGACCAATGGATCTCACTCTGTCACAGGGGCTGGAGTGCTGTGGCACAATCTCAGCTCACATTTCTTTTCACCATTCAATTACGTTCCATTCCATCCCATTCCATTCCTCT]chrUn_GL000218v1:54429] . PASS SVTYPE=BND;MATEID=r_230_1;SVINSLEN=232;SVINSSEQ=CAGTCCACTCCATTCCAATCCATTCCATTCCATTCCTTTCTTTCATGCTACCTGACTTCAAACTATACTACAAGGCTACAGTAACCAAAACAGCATGGTATTAGTACCAAAACAGAGATATAGACCAATGGATCTCACTCTGTCACAGGGGCTGGAGTGCTGTGGCACAATCTCAGCTCACATTTCTTTTCACCATTCAATTACGTTCCATTCCATCCCATTCCATTCCTCT TR:VR 124:7 52:0 chrUn_GL000218v1 54429 r_230_1 G GAGAGGAATGGAATGGGATGGAATGGAACGTAATTGAATGGTGAAAAGAAATGTGAGCTGAGATTGTGCCACAGCACTCCAGCCCCTGTGACAGAGTGAGATCCATTGGTCTATATCTCTGTTTTGGTACTAATACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGCATGAAAGAAAGGAATGGAATGGAATGGATTGGAATGGAGTGGACTG]chr16:34098032] . PASS SVTYPE=BND;MATEID=r_230_0;SVINSLEN=232;SVINSSEQ=AGAGGAATGGAATGGGATGGAATGGAACGTAATTGAATGGTGAAAAGAAATGTGAGCTGAGATTGTGCCACAGCACTCCAGCCCCTGTGACAGAGTGAGATCCATTGGTCTATATCTCTGTTTTGGTACTAATACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGCATGAAAGAAAGGAATGGAATGGAATGGATTGGAATGGAGTGGACTG TR:VR 124:7 52:0 chr2 206239908 r_336 C . PASS END=206348786;SVTYPE=DUP;SVLEN=108878 TR:VR 105:21 25:0 chr20 54677073 r_362 A . PASS END=54730970;SVTYPE=DUP;SVLEN=53897 TR:VR 86:12 33:0 chr21 7939737 i_924 A . Too_low_VAF END=7939737;SVTYPE=INS;SVINSLEN=166;SVINSSEQ=TTCAAGTCCATTCCACTCCAGTCCATTCCATTCGATTCCACTCCATTCCAGTACATTCCATTCGAGTCTATTCCATTGCATTCCATTCAATTCCATTCCATTCTATCCGATTCCATTCCATTTTATTCCTTTCCATTCCATTTCATTCCTTTCTAATCCATTTCAT TR:VR 370:7 144:1 chr22 20068858 r_384_0 T T]chr22:20068888] . PASS SVTYPE=BND;MATEID=r_384_1 TR:VR 40:6 14:0 chr22 20068888 r_384_1 A A]chr22:20068858] . PASS SVTYPE=BND;MATEID=r_384_0 TR:VR 40:6 14:0 chr3 74659521 r_397 T . PASS END=74707222;SVTYPE=DUP;SVLEN=47701;SVINSLEN=32;SVINSSEQ=ATACTGCATACAGTATATACTGTGTGTAGAGT TR:VR 82:11 24:0 chr4 83259327 d_1727 A . PASS END=83259840;SVTYPE=DEL;SVLEN=-513 TR:VR 37:16 27:0 chr7 62372107 d_1953 C . Too_small_size END=62372144;SVTYPE=DEL;SVLEN=-37;SVINSLEN=1;SVINSSEQ=T TR:VR 42:4 12:0 chr9 5402967 r_547_0 A [chrX:131361170[TTTTAAAAATTGA . Too_low_VAF SVTYPE=BND;MATEID=r_547_1;SVINSLEN=12;SVINSSEQ=TTTTAAAAATTG TR:VR 82:3 31:0 chrX 131361170 r_547_1 A [chr9:5402967[CAATTTTTAAAAA . Too_low_VAF SVTYPE=BND;MATEID=r_547_0;SVINSLEN=12;SVINSSEQ=CAATTTTTAAAA TR:VR 82:3 31:0 chr1 146042550 d_186 G . PASS END=146047282;SVTYPE=DEL;SVLEN=-4732;SVINSLEN=1;SVINSSEQ=A TR:VR 42:6 18:0 chr1 221703331 d_212 A . Too_small_size END=221703368;SVTYPE=DEL;SVLEN=-37;SVINSLEN=1;SVINSSEQ=G TR:VR 48:24 18:0 chr12 2841612 r_117 G . PASS END=3403538;SVTYPE=DUP;SVLEN=561926 TR:VR 79:15 21:0 chr12 55835579 d_432 A . Too_small_size END=55835614;SVTYPE=DEL;SVLEN=-35 TR:VR 36:28 18:0 chr13 93077943 r_151_0 T TACTAAGATC[chr9:88615060[ . PASS SVTYPE=BND;MATEID=r_151_1;SVINSLEN=9;SVINSSEQ=ACTAAGATC TR:VR 57:16 33:0 chr9 88615060 r_151_1 A ]chr13:93077943]GATCTTAGTA . PASS SVTYPE=BND;MATEID=r_151_0;SVINSLEN=9;SVINSSEQ=GATCTTAGT TR:VR 57:16 33:0 chr15 81591591 d_776 C . PASS END=81592035;SVTYPE=DEL;SVLEN=-444 TR:VR 40:18 13:0 chr19 4685146 r_266 G . PASS END=4857909;SVTYPE=DUP;SVLEN=172763 TR:VR 68:19 35:0 chr22 10718340 i_1002 T . Too_low_VAF END=10718340;SVTYPE=INS;SVINSLEN=260;SVINSSEQ=TCCATTCCATTCGATACCATTCCAATCCATTACATTCCATTCGAGTCCATTCCATTGTATTCGAGTCCTTTCCATTCTGTTTCATTCGAGTCCATTCCATTCCACTCCATTCCATTCCACTTCATTCCATTCCATTCGTGTCCATTCAATTCCATTCCTTTCGAGTACATTCCATTCCATTCCATTCGTGTCCATTCAATTCCATTCCTTTCGATTACATTCCATTCCATTCCTTTCTATTCCATTCCAGTCTATTCAAT TR:VR 187:3 60:0 chr3 135919173 r_421 T . PASS END=145320211;SVTYPE=DEL;SVLEN=-9401038 TR:VR 108:60 36:0 chr3 196118853 d_1634 T . Too_small_size END=196118888;SVTYPE=DEL;SVLEN=-35 TR:VR 57:50 11:0 chr3 77290448 i_1084 A . PASS END=77290449;SVTYPE=INS;SVINSLEN=270;SVINSSEQ=AAATTGACGGTTAAACGGGAAAGCTGAGGCTAGATCACTAAAGACATAAAGTAAAATTGACGGTTAAATGGGTAAGCTGAGGCTAGATCACTAAAGACATAAAGTAAAATTGACAGTTAAACAGGTAAGCTGAGGCTAGATCACCCCAGACATAAAGTAAAATTGATGGTTAAGCAGGAAGGCTGAGGCTAGATCACCCCAGACATAAAGTAAAATTGATGGTTAAACTTAGGGTAAGCTGAGGCTACATCACCCCAGACATAAAGTAAA TR:VR 48:3 11:0 chr4 83634748 r_444 C . PASS END=158391535;SVTYPE=DEL;SVLEN=-74756787 TR:VR 42:16 27:0 chr6 159905756 d_1886 T . PASS END=159905817;SVTYPE=DEL;SVLEN=-61 TR:VR 40:8 17:0 chr7 62878825 d_1954 G . PASS END=62878935;SVTYPE=INS;SVINSLEN=282;SVINSSEQ=CTTTGTGATGCGTAAATTCATTTCACAGAGTTAAAAGTTTATTTTCATACATCAGTCTGGAAACACTGTTTTGGCAAAATATGCAAAGGGATATTTGGGAGCACATTGAGGCGTATGGTGAAAAAGGAAATATCTTCACATAAAAACTAGAAGGAAGCTTTCTGAGAAACTGCTTTGTGACGGGTGCATTCATCTCACAGAGTTTAACATTTCTCTGCATTCAGCAGTTTGGAAACACTGTTTTTGTAGAATATGCAAAAGGATATCTGGGAGCTCATTGAA TR:VR 38:3 15:0 chr8 144417065 d_2064 G . PASS END=144417563;SVTYPE=DEL;SVLEN=-498 TR:VR 63:19 12:0 chr1 115151939 r_30_0 A AAACCTTGCTTTTTATTGAGCAGTTTTGAAACTCTCTTTTTGTAGAATCTGCAAGTGGACATTTGGAGCAGTTCAAGGCCTATAGTGGAAAAGGAAATATCTTCACATAAAAACTAGAAGAGAATTCTGAGAAACTT]chr15:19813410] . Too_low_VAF SVTYPE=BND;MATEID=r_30_1;SVINSLEN=136;SVINSSEQ=AACCTTGCTTTTTATTGAGCAGTTTTGAAACTCTCTTTTTGTAGAATCTGCAAGTGGACATTTGGAGCAGTTCAAGGCCTATAGTGGAAAAGGAAATATCTTCACATAAAAACTAGAAGAGAATTCTGAGAAACTT TR:VR 96:3 42:0 chr15 19813410 r_30_1 G GAAGTTTCTCAGAATTCTCTTCTAGTTTTTATGTGAAGATATTTCCTTTTCCACTATAGGCCTTGAACTGCTCCAAATGTCCACTTGCAGATTCTACAAAAAGAGAGTTTCAAAACTGCTCAATAAAAAGCAAGGTT]chr1:115151939] . Too_low_VAF SVTYPE=BND;MATEID=r_30_0;SVINSLEN=136;SVINSSEQ=AAGTTTCTCAGAATTCTCTTCTAGTTTTTATGTGAAGATATTTCCTTTTCCACTATAGGCCTTGAACTGCTCCAAATGTCCACTTGCAGATTCTACAAAAAGAGAGTTTCAAAACTGCTCAATAAAAAGCAAGGTT TR:VR 96:3 42:0 chr10 60698629 r_73 A . PASS END=66493104;SVTYPE=DUP;SVLEN=5794475 TR:VR 88:10 36:0 chr11 30998769 d_351 T . Too_small_size END=30998810;SVTYPE=DEL;SVLEN=-41 TR:VR 28:12 12:0 chr12 56647877 r_128 C . PASS END=56719843;SVTYPE=DUP;SVLEN=71966 TR:VR 95:17 24:0 chr13 93079425 r_152_0 T ]chr9:88778386]T . PASS SVTYPE=BND;MATEID=r_152_1 TR:VR 71:23 32:0 chr9 88778386 r_152_1 T T[chr13:93079425[ . PASS SVTYPE=BND;MATEID=r_152_0 TR:VR 71:23 32:0 chr14 59624104 d_504 T . PASS END=59624152;SVTYPE=DEL;SVLEN=-48 TR:VR 30:14 17:0 chr15 81701271 r_201 A . PASS END=81711306;SVTYPE=DEL;SVLEN=-10035 TR:VR 43:6 29:0 chr19 11136613 r_270 G . PASS END=11205250;SVTYPE=DUP;SVLEN=68637 TR:VR 114:17 25:0 chr2 139234742 d_1243 T . PASS END=139235023;SVTYPE=DEL;SVLEN=-281 TR:VR 30:15 15:0 chr2 89789997 d_1125 C . Too_small_size END=89789979;SVTYPE=INS;SVINSLEN=51;SVINSSEQ=TACTCGATTCCTTTCGATGATTGCATTTGATTCCATTCGATGATTCCGTTG TR:VR 73:5 31:0 chr20 58405548 d_1366 T . PASS END=58405608;SVTYPE=DEL;SVLEN=-60 TR:VR 40:15 10:0 chr22 10718421 d_1443 T . Too_low_VAF END=10718499;SVTYPE=DEL;SVLEN=-78;SVINSLEN=3;SVINSSEQ=CCA TR:VR 181:6 58:1 chr3 83360039 r_398 C . PASS END=83381294;SVTYPE=DUP;SVLEN=21255;SVINSLEN=1;SVINSSEQ=T TR:VR 71:12 33:0 chr4 83648979 i_1242 T . PASS END=83648979;SVTYPE=INS;SVINSLEN=114;SVINSSEQ=CTCTATATATATTTTGATAAATATATATAATATATATATATTTTAAATATATATATTATATATATATATATATATATATATATATAATATATATATTTTGAGAAATATATATAA TR:VR 26:9 11:0 chrX 66644701 d_2287 G . PASS END=66645106;SVTYPE=DEL;SVLEN=-405 TR:VR 41:16 20:0 chr1 222138404 i_76 A . PASS END=222138404;SVTYPE=INS;SVINSLEN=150;SVINSSEQ=TATATACATACACACACATATATGTGTATATATACATATATACATACACGCACATATATGTGTATATATACACATATATACATACACGCACATATATGTGTATATATACATATATACATACACGCACATATATGTGTGTATATATACATA TR:VR 36:7 10:0 chr1 42262788 d_55 G . PASS END=42262842;SVTYPE=DEL;SVLEN=-54 TR:VR 47:14 11:0 chr11 32431002 d_352 A . PASS END=32431499;SVTYPE=DEL;SVLEN=-497 TR:VR 39:17 9:0 chr12 58324202 d_433 T . PASS END=58324265;SVTYPE=DEL;SVLEN=-63 TR:VR 32:23 13:0 chr13 95588849 r_153 C . PASS END=95667073;SVTYPE=DUP;SVLEN=78224 TR:VR 58:17 22:0 chr14 60936013 r_164 G . PASS END=76189384;SVTYPE=DUP;SVLEN=15253371 TR:VR 93:5 40:0 chr2 143099981 r_322 A . PASS END=143184045;SVTYPE=DUP;SVLEN=84064 TR:VR 80:11 33:0 chr20 28810139 d_1327 A . Too_low_VAF END=28810262;SVTYPE=INS;SVINSLEN=126;SVINSSEQ=GGCACCAAATATCCAGTTGCAGATTCTATGAAAGAGAGATTCAATATTGCTCAATGAAAAGATAGGTTCAACTATGTGAGTTGAATGCACACATCACGAAGAAGTTTCTCAGAATGCCTCAGTGTA TR:VR 231:4 86:0 chr21 44022422 d_1431 T . PASS END=44023115;SVTYPE=DEL;SVLEN=-693;SVINSLEN=114;SVINSSEQ=ACAGGCACATGGCACCATGCCTGGCTAAATTTTTTTTTTTTTTTTTTTGAGATGGAATTTCACTCTTGTTGCCCATGCTGGAGTGCAGTGGTGCGATCTTGGCTCACTGCAACC TR:VR 59:19 18:0 chr3 83556971 r_399 T . PASS END=83578963;SVTYPE=DUP;SVLEN=21992 TR:VR 81:16 25:0 chr4 86885568 d_1728 A . PASS END=86885893;SVTYPE=DEL;SVLEN=-325 TR:VR 29:16 16:0 chr8 130547463 d_2048 G . PASS END=130547530;SVTYPE=DEL;SVLEN=-67 TR:VR 70:10 21:0 chr9 102366724 d_2097 T . PASS END=102376160;SVTYPE=DEL;SVLEN=-9436;SVINSLEN=238;SVINSSEQ=TATTGTATGTTATATGTATTACATATATATCATGTATCATATGTATCACACTGTTTTATTGATGATGTTACAGAAAGCAGAAAAAAGTTGTTATAGCGAGATTAAACATTTGGATAATGTTATGTCAGTACTACCATATGTCATACATGATTACTGGCATAACATTATCCAAATGTATTACAACTATACGATGATTGGCATATAGTTGTAATACATGAGAACTGCCATAACATTATCC TR:VR 48:8 20:0 chr9 61933449 d_2083 A . PASS END=61933961;SVTYPE=DEL;SVLEN=-512 TR:VR 56:3 12:0 chr1 146956976 r_39_0 A A]chr1:148127549] . Too_low_VAF SVTYPE=BND;MATEID=r_39_1 TR:VR 105:3 27:0 chr1 148127549 r_39_1 A A]chr1:146956976] . Too_low_VAF SVTYPE=BND;MATEID=r_39_0 TR:VR 105:3 27:0 chr1 248754646 r_57_0 C CACACACACCACACACACC[chr21:43173683[ . Too_low_VAF SVTYPE=BND;MATEID=r_57_1;SVINSLEN=18;SVINSSEQ=ACACACACCACACACACC TR:VR 80:3 15:0 chr21 43173683 r_57_1 A ]chr1:248754646]GGTGTGTGTGGTGTGTGTA . Too_low_VAF SVTYPE=BND;MATEID=r_57_0;SVINSLEN=18;SVINSSEQ=GGTGTGTGTGGTGTGTGT TR:VR 80:3 15:0 chr1 43220859 d_56 A . PASS END=43220933;SVTYPE=DEL;SVLEN=-74 TR:VR 58:19 16:0 chr10 608442 d_240 C . Too_small_size END=608459;SVTYPE=DEL;SVLEN=-17 TR:VR 59:4 15:0 chr11 89563415 i_222 G . Too_small_size END=89563415;SVTYPE=INS;SVINSLEN=39;SVINSSEQ=AACCTGGGAAGTGGCTCCTTGGGAGATTGATATACTCCA TR:VR 37:12 19:0 chr14 60989843 r_165_0 A A[chr15:99559680[ . PASS SVTYPE=BND;MATEID=r_165_1 TR:VR 90:11 22:0 chr15 99559680 r_165_1 G ]chr14:60989843]G . PASS SVTYPE=BND;MATEID=r_165_0 TR:VR 90:11 22:0 chr15 82272706 r_202_0 T [chr15:82434589[G . PASS SVTYPE=BND;MATEID=r_202_1 TR:VR 94:11 27:0 chr15 82434589 r_202_1 G [chr15:82272706[G . PASS SVTYPE=BND;MATEID=r_202_0 TR:VR 94:11 27:0 chr2 37090223 r_294 T . PASS END=37208152;SVTYPE=DUP;SVLEN=117929 TR:VR 79:15 39:0 chr21 44241393 d_1432 C . PASS END=44241926;SVTYPE=DEL;SVLEN=-533 TR:VR 43:8 17:0 chrUn_KI270442v1 203796 d_2214 A . Too_low_VAF END=205105;SVTYPE=DEL;SVLEN=-1309;SVINSLEN=108;SVINSSEQ=AGAAAGCACACATCACAAAGAAGTTTCTCAGAAAGTTTCTGTCTAGTTTTTATATGAAGATATTTCCTTTTTCACCTTAGGCCTCAAAGCACTCCAAATATCTGTTTG TR:VR 210:4 84:1 chrX 127331015 d_2303 T . PASS END=127331515;SVTYPE=DEL;SVLEN=-500 TR:VR 40:20 9:0 chr1 147258303 d_187 G . PASS END=147259362;SVTYPE=DEL;SVLEN=-1059 TR:VR 58:15 18:0 chr1 43314711 i_39 C . PASS END=43314711;SVTYPE=INS;SVINSLEN=64;SVINSSEQ=CAGCTACTTGGAAGGGTGAAGCAGAAGAATCGCTTGAACCCAGGAGGTGGAGGTTGCAGTGAGC TR:VR 58:16 21:0 chr11 89563446 i_223 T . Too_small_size END=89563446;SVTYPE=INS;SVINSLEN=37;SVINSSEQ=ATACTCCAACCTGGGAAGTGGCTCCTTGGGAGATTGA TR:VR 37:13 19:0 chr12 32576084 d_418 G . PASS END=32576145;SVTYPE=DEL;SVLEN=-61 TR:VR 37:15 14:0 chr14 66653825 r_166_0 G [chr4:16483954[A . PASS SVTYPE=BND;MATEID=r_166_1 TR:VR 67:17 24:0 chr4 16483954 r_166_1 A [chr14:66653825[A . PASS SVTYPE=BND;MATEID=r_166_0 TR:VR 67:17 24:0 chr15 101980999 d_793 A . Too_small_size;Too_low_VAF END=101980974;SVTYPE=INS;SVINSLEN=1;SVINSSEQ=C TR:VR 113:3 34:0 chr17 45031878 d_952 T . PASS END=45032562;SVTYPE=DEL;SVLEN=-684 TR:VR 30:24 15:0 chr19 12187199 d_1043 A . PASS END=12187515;SVTYPE=DEL;SVLEN=-316;SVINSLEN=64;SVINSSEQ=CACTGGAGAGAAACCCTATGAATGTCAGGAATGTGGAAAAGCCTTCACTTGTATCACAAGTGTT TR:VR 39:5 15:0 chr22 20360780 i_1021 C . PASS END=20360780;SVTYPE=INS;SVINSLEN=190;SVINSSEQ=GGCATCGCCAACGAGGACGCTGCCCAGGGCATCGCGAACGAGGACGCCGCCCAGGACATCGCAAACGAGGACGCTGCCCAGGGCATCTCTAAGGAGGACGCCGTCCAGGGCATCGCGAACCAGGACGCCGCCCAGGGCATCGCTAAGGAGGACGCCGTCCAGGGCATCGCTAACGAGGACGCCGCCCAGG TR:VR 28:4 10:0 chr3 145053965 r_422 T . PASS END=145061517;SVTYPE=DUP;SVLEN=7552 TR:VR 20:6 17:0 chr7 66098890 r_500_0 A [chrX:1587596[C . Too_low_VAF SVTYPE=BND;MATEID=r_500_1 TR:VR 469:5 121:0 chrX 1587596 r_500_1 C [chr7:66098890[C . Too_low_VAF SVTYPE=BND;MATEID=r_500_0 TR:VR 469:5 121:0 chr9 6416506 d_2069 G . Too_small_size END=6416547;SVTYPE=DEL;SVLEN=-41 TR:VR 48:22 18:0 chrX 128696312 r_584 G . PASS END=128761217;SVTYPE=DEL;SVLEN=-64905;SVINSLEN=1;SVINSSEQ=G TR:VR 47:9 25:0 chrX 8130536 r_570 C . PASS END=8148718;SVTYPE=DUP;SVLEN=18182;SVINSLEN=1;SVINSSEQ=T TR:VR 69:11 25:0 chrY 56838989 i_1871 T . Too_low_VAF END=56838989;SVTYPE=INS;SVINSLEN=562;SVINSSEQ=CCACCTACAGGGGGTATTCTGACGTATTTCACGGATGCAGACTGGTCACAGAGAGGCCAGCGGGCTCCCTTGCACATCAGCCAGTGTGCGCAATTAGAGCAGGTCTAACCAGGAGGCAGGCAAAGAGAGCTAGAGGTCTGCGTTCTGCCGCCAGGTGATGCAACACTGGTGGCAGCTGGGAGGCTGCAGGGGTACGGGGTGGGTTACAAATTGTGGCACTGAGGCACAGAAGGGGCGAGCCGACGGAGGGGTGTCAGGCCTGGACGCTGCCCGTGTCCGGTGTTTCGCGGGACCGGGGTCTCCACCCAGCCCAGGGGATGACGCATTTTCCGGGTGTGGGGTTGAGGGTGGGGATGGTGTGCTCAGCGGGGGTGGGGTGGAGGAAAGGGCAGGAGAGCTCTGCATGGGCTGCCTCCCAGCCAGCCTAGGCAGCTGTCCCTGCAAACTGATGAACGTAGGTGATGTAACACTTGTCTATGCTTTGTCTACACTGGGATCATTGGGACATATTAGTCTGCATGAGTTCACCTCAGGTGGTGACTGGACCTTTCCTCTATGCTCT TR:VR 414:3 116:0 chr1 147797533 d_188 T . PASS END=147797605;SVTYPE=DEL;SVLEN=-72 TR:VR 49:18 14:0 chr12 6584890 r_120 T . PASS END=6629116;SVTYPE=DUP;SVLEN=44226;SVINSLEN=4;SVINSSEQ=ACAG TR:VR 87:12 24:0 chr16 89587126 i_525 G . PASS END=89587126;SVTYPE=INS;SVINSLEN=135;SVINSSEQ=CCGCCCCATGCCGCCCCCTCGGTCCGTGGCCCGCCCCTCCCCGCCCCCCCCCCTCAGTCTGTGGCCCCGCCCCATCCCCGCCCCCTCAGTCCGTGGCCCCGCCCCTCCCCGCCCCCTCAGTCTGTGGCCCCGCCC TR:VR 22:3 14:0 chr17 48457546 d_953 A . PASS END=48458330;SVTYPE=DEL;SVLEN=-784 TR:VR 21:12 13:0 chr18 11825622 d_1006 T . PASS END=11825677;SVTYPE=DEL;SVLEN=-55 TR:VR 45:23 12:0 chr2 14961042 d_1094 A . PASS END=14961333;SVTYPE=DEL;SVLEN=-291 TR:VR 38:9 21:0 chr2 212421502 r_337_0 A A]chr2:212423230] . PASS SVTYPE=BND;MATEID=r_337_1 TR:VR 48:41 17:0 chr2 212423230 r_337_1 A A]chr2:212421502] . PASS SVTYPE=BND;MATEID=r_337_0 TR:VR 48:41 17:0 chr2 39619836 r_295 T . PASS END=39686808;SVTYPE=DUP;SVLEN=66972 TR:VR 91:14 27:0 chr20 28841358 r_354_0 T TGTTTGAAGAATTAGCAAGTGGATATTTGGAGAGCTTTGAGGCCTATTGTGGAAAAGGAAATATCTTCAAATAAAAACTACACAGAAACATTCTGAGAAACTTCTTTGTGAATTGTGTGCATTCAACTCACCGGGGAGAGCCTGTTTAAACAAATGAGAGGTTTAACTCTGTGAGATGAATGCACACATCACAAAGAAGTTTCTCAGATTGCTTCTGTCTGCATTCTATGTGAAGATATTTCCTTTTCTAAGATAGGCAGCAAAGCCTTCCA]chrUn_KI270757v1:39189] . Too_low_VAF SVTYPE=BND;MATEID=r_354_1;SVINSLEN=271;SVINSSEQ=GTTTGAAGAATTAGCAAGTGGATATTTGGAGAGCTTTGAGGCCTATTGTGGAAAAGGAAATATCTTCAAATAAAAACTACACAGAAACATTCTGAGAAACTTCTTTGTGAATTGTGTGCATTCAACTCACCGGGGAGAGCCTGTTTAAACAAATGAGAGGTTTAACTCTGTGAGATGAATGCACACATCACAAAGAAGTTTCTCAGATTGCTTCTGTCTGCATTCTATGTGAAGATATTTCCTTTTCTAAGATAGGCAGCAAAGCCTTCCA TR:VR 207:4 94:0 chrUn_KI270757v1 39189 r_354_1 T TTGGAAGGCTTTGCTGCCTATCTTAGAAAAGGAAATATCTTCACATAGAATGCAGACAGAAGCAATCTGAGAAACTTCTTTGTGATGTGTGCATTCATCTCACAGAGTTAAACCTCTCATTTGTTTAAACAGGCTCTCCCCGGTGAGTTGAATGCACACAATTCACAAAGAAGTTTCTCAGAATGTTTCTGTGTAGTTTTTATTTGAAGATATTTCCTTTTCCACAATAGGCCTCAAAGCTCTCCAAATATCCACTTGCTAATTCTTCAAAC]chr20:28841358] . Too_low_VAF SVTYPE=BND;MATEID=r_354_0;SVINSLEN=271;SVINSSEQ=TGGAAGGCTTTGCTGCCTATCTTAGAAAAGGAAATATCTTCACATAGAATGCAGACAGAAGCAATCTGAGAAACTTCTTTGTGATGTGTGCATTCATCTCACAGAGTTAAACCTCTCATTTGTTTAAACAGGCTCTCCCCGGTGAGTTGAATGCACACAATTCACAAAGAAGTTTCTCAGAATGTTTCTGTGTAGTTTTTATTTGAAGATATTTCCTTTTCCACAATAGGCCTCAAAGCTCTCCAAATATCCACTTGCTAATTCTTCAAAC TR:VR 207:4 94:0 chr21 7940895 d_1391 C . Too_low_VAF END=7940941;SVTYPE=INS;SVINSLEN=86;SVINSSEQ=CACTCATTTCCACTCGATTCCAATCTATTCCATTCTATTCCATTCCATTCCATTCCATTCAATTCGCTTCCATGTGATTTCATTTG TR:VR 390:5 155:1 chr3 145742378 d_1567 T . PASS END=145742447;SVTYPE=DEL;SVLEN=-69;SVINSLEN=1;SVINSSEQ=T TR:VR 68:19 13:0 chr4 99390262 r_445 T . PASS END=99396601;SVTYPE=DUP;SVLEN=6339 TR:VR 35:7 16:0 chr5 54788765 r_463 C . PASS END=54836825;SVTYPE=DEL;SVLEN=-48060 TR:VR 62:18 35:0 chr7 104357917 d_1973 A . Too_small_size END=104357963;SVTYPE=DEL;SVLEN=-46 TR:VR 34:7 11:0 chr7 67376872 d_1958 G . PASS END=67377422;SVTYPE=DEL;SVLEN=-550 TR:VR 40:18 16:0 chr9 106587889 d_2098 G . PASS END=106590006;SVTYPE=DEL;SVLEN=-2117;SVINSLEN=1;SVINSSEQ=A TR:VR 36:26 12:0 chr9 65524091 d_2085 A . PASS END=65524586;SVTYPE=DEL;SVLEN=-495 TR:VR 47:12 8:0 chrUn_KI270519v1 41558 d_2225 A . PASS END=41913;SVTYPE=DEL;SVLEN=-355 TR:VR 76:6 18:0 chr1 147879826 d_189 A . Too_small_size END=147879866;SVTYPE=DEL;SVLEN=-40 TR:VR 54:13 16:0 chr10 41831807 d_263 T . PASS END=41832189;SVTYPE=DEL;SVLEN=-382 TR:VR 43:16 13:0 chr11 38859698 r_90 A . PASS END=38912824;SVTYPE=DUP;SVLEN=53126;SVINSLEN=2;SVINSSEQ=AG TR:VR 87:11 37:0 chr12 66406992 d_435 C . Too_small_size END=66407036;SVTYPE=DEL;SVLEN=-44 TR:VR 40:10 12:0 chr14 70463703 d_505 G . Too_small_size END=70463749;SVTYPE=DEL;SVLEN=-46 TR:VR 41:34 16:0 chr15 91011817 d_778 A . PASS END=91013852;SVTYPE=DEL;SVLEN=-2035 TR:VR 34:13 13:0 chr2 150476759 d_1244 T . PASS END=150478167;SVTYPE=DEL;SVLEN=-1408 TR:VR 33:13 12:0 chr2 212421677 r_338_0 A [chr2:213165223[A . PASS SVTYPE=BND;MATEID=r_338_1 TR:VR 51:39 36:0 chr2 213165223 r_338_1 A [chr2:212421677[A . PASS SVTYPE=BND;MATEID=r_338_0 TR:VR 51:39 36:0 chr2 40515042 d_1104 T . PASS END=40515132;SVTYPE=DEL;SVLEN=-90 TR:VR 34:14 11:0 chr7 107546401 d_1974 A . Too_small_size END=107546439;SVTYPE=DEL;SVLEN=-38 TR:VR 38:11 17:0 chr7 215265 d_1907 T . PASS END=215333;SVTYPE=DEL;SVLEN=-68;SVINSLEN=24;SVINSSEQ=GGGGCTGGGTGGGGGGAGCAGGGC TR:VR 39:3 10:0 chr7 6790860 i_1440 A . PASS END=6790860;SVTYPE=INS;SVINSLEN=75;SVINSSEQ=CCCAGGAGGTGGAGATTGCAGTGAGCTCAGATCGTGCCACTGCACTCCAGCCTGGGGAACAGAGCGAGACTCTGC TR:VR 48:22 26:0 chr8 133307755 r_538 T . PASS END=133313846;SVTYPE=DUP;SVLEN=6091 TR:VR 83:14 21:0 chr8 16858580 r_516_0 G G]chr8:27799028] . PASS SVTYPE=BND;MATEID=r_516_1 TR:VR 54:22 32:0 chr8 27799028 r_516_1 G G]chr8:16858580] . PASS SVTYPE=BND;MATEID=r_516_0 TR:VR 54:22 32:0 chrX 129036203 r_585 A . PASS END=129040747;SVTYPE=DUP;SVLEN=4544 TR:VR 48:5 12:0 chr1 148530845 r_40_0 T T]chr18:48486771] . PASS SVTYPE=BND;MATEID=r_40_1 TR:VR 81:12 17:0 chr18 48486771 r_40_1 A A]chr1:148530845] . PASS SVTYPE=BND;MATEID=r_40_0 TR:VR 81:12 17:0 chr14 75978973 r_168 T . PASS END=76158033;SVTYPE=DUP;SVLEN=179060 TR:VR 89:14 32:0 chr15 17033978 d_740 G . PASS END=17034086;SVTYPE=INS;SVINSLEN=110;SVINSSEQ=TGCATTCAACTCACAGAGTTGAACTTATCTTTGGATTGAGCAGTTTTGAAACTTTCCTTTTGTAGAATCTGCAAGTGGATATTTGGAGCCCGTTTTGGCTTGTGGTGTAA TR:VR 90:7 36:1 chr15 91261920 r_203_0 A [chr15:91263668[A . PASS SVTYPE=BND;MATEID=r_203_1 TR:VR 40:8 16:0 chr15 91263668 r_203_1 A [chr15:91261920[A . PASS SVTYPE=BND;MATEID=r_203_0 TR:VR 40:8 16:0 chr16 914494 r_215 G . PASS END=914855;SVTYPE=DUP;SVLEN=361 TR:VR 58:9 11:0 chr17 61109319 r_246_0 A [chr2:211217471[TATATATATATACACACACACT . PASS SVTYPE=BND;MATEID=r_246_1;SVINSLEN=21;SVINSSEQ=TATATATATATACACACACAC TR:VR 63:4 48:1 chr2 211217471 r_246_1 T [chr17:61109319[GTGTGTGTGTATATATATATAT . PASS SVTYPE=BND;MATEID=r_246_0;SVINSLEN=21;SVINSSEQ=GTGTGTGTGTATATATATATA TR:VR 63:4 48:1 chr18 12202408 r_256_0 T ]chr2:6658156]TTTTTTTTTTTTTTTTTTTTT . Too_low_VAF SVTYPE=BND;MATEID=r_256_1;SVINSLEN=20;SVINSSEQ=TTTTTTTTTTTTTTTTTTTT TR:VR 68:3 34:0 chr2 6658156 r_256_1 T TAAAAAAAAAAAAAAAAAAAA[chr18:12202408[ . Too_low_VAF SVTYPE=BND;MATEID=r_256_0;SVINSLEN=20;SVINSSEQ=AAAAAAAAAAAAAAAAAAAA TR:VR 68:3 34:0 chr2 214519947 r_339 A . PASS END=214521780;SVTYPE=DUP;SVLEN=1833 TR:VR 29:4 14:0 chr2 40548567 r_296 T . PASS END=40603493;SVTYPE=DUP;SVLEN=54926 TR:VR 79:9 25:0 chr3 195493960 d_1593 T . Too_low_VAF END=195494761;SVTYPE=DEL;SVLEN=-801;SVINSLEN=14;SVINSSEQ=ATCACAGTGGTGGA TR:VR 134:3 30:0 chr7 21624971 d_1923 C . PASS END=21626259;SVTYPE=DEL;SVLEN=-1288 TR:VR 39:16 12:0 chr7 6900556 r_493 C . PASS END=6911785;SVTYPE=DUP;SVLEN=11229 TR:VR 51:6 27:0 chr8 133519932 d_2052 A . PASS END=133520106;SVTYPE=DEL;SVLEN=-174 TR:VR 65:14 9:0 chr8 16858588 r_517_0 T [chr8:27799039[A . PASS SVTYPE=BND;MATEID=r_517_1 TR:VR 54:16 32:0 chr8 27799039 r_517_1 A [chr8:16858588[A . PASS SVTYPE=BND;MATEID=r_517_0 TR:VR 54:16 32:0 chr12 71166572 d_437 T . Too_small_size END=71166610;SVTYPE=DEL;SVLEN=-38 TR:VR 31:13 14:0 chr14 103715561 d_520 C . PASS END=103715756;SVTYPE=DEL;SVLEN=-195 TR:VR 40:15 13:0 chr15 91264055 r_204_0 T T]chr15:91264178] . PASS SVTYPE=BND;MATEID=r_204_1 TR:VR 38:5 16:0 chr15 91264178 r_204_1 C C]chr15:91264055] . PASS SVTYPE=BND;MATEID=r_204_0 TR:VR 38:5 16:0 chr17 61674652 r_247_0 C ]chr8:141257753]C . PASS SVTYPE=BND;MATEID=r_247_1 TR:VR 92:20 26:0 chr8 141257753 r_247_1 C C[chr17:61674652[ . PASS SVTYPE=BND;MATEID=r_247_0 TR:VR 92:20 26:0 chr2 1525065 i_715 G . PASS END=1525065;SVTYPE=INS;SVINSLEN=413;SVINSSEQ=AGCAACCTCCCCAAATCCCTCCCACTGTGTGCAGCCTCCCCAAATCCTCCCGACTCTGTGCAACCTCCCAAAATTGCCCCCACTGTGTGCAACCTCCTCAAATCCCTCCCACTCTGTGCAAACTCCCCAAACCCCCACACTCTGTGCAACCGCCCCATATATCCCCCACTCTGTGCAACCTCCCCAAAACACCCCTCAATGTGTGCAACCTCGCCCAATCACGACACTGTGTGCAATCTCCCCAAATCCCCGCCCCACTCTTTGCAACCTCGCCAAATCCCCCCCACTCTCTGCAACCTCCCCAAATCACCCCCCACTCTCTGTAACCTCCCCCAAATCACCCCCACTCTCTGCAACCTCCTCCCCAAATCACCCCCACTCTCTGCAACCTCCCCAAATCACCCCCACTCTCT TR:VR 54:5 15:0 chr2 21580939 d_1096 G . PASS END=21581015;SVTYPE=DEL;SVLEN=-76 TR:VR 38:9 14:0 chr20 29208044 r_355_0 A [chrUn_KI270442v1:353598[TGCTCAATCAAAAGAAAGGTTTAACTCTGTGAGATGAAAAGAGTTTCAAAACTGCTCAATCAAAACAAAGGTTTAACTCTGTGAGATGAAAGCACACATCACAAAGAAGTTTCTCAGATTGTTTCTGCCTAGATTTTATATGAAGATATTTGTTTTTCTACCACTGGCCGCAAAGCGCTCCAATGGTGCCTATGGTGGAAAAGGAAATATCTTCACATAAAAACTACACAGAAGCATTCTGAGAAACTGCTCTGTGATGTGCGCATTCAACTCAAAAATTTTGAACCTATCTTTTGAGAGCAGTTTTGAAACTCTCTTTTTCTACG . Too_low_VAF SVTYPE=BND;MATEID=r_355_1;SVINSLEN=325;SVINSSEQ=TGCTCAATCAAAAGAAAGGTTTAACTCTGTGAGATGAAAAGAGTTTCAAAACTGCTCAATCAAAACAAAGGTTTAACTCTGTGAGATGAAAGCACACATCACAAAGAAGTTTCTCAGATTGTTTCTGCCTAGATTTTATATGAAGATATTTGTTTTTCTACCACTGGCCGCAAAGCGCTCCAATGGTGCCTATGGTGGAAAAGGAAATATCTTCACATAAAAACTACACAGAAGCATTCTGAGAAACTGCTCTGTGATGTGCGCATTCAACTCAAAAATTTTGAACCTATCTTTTGAGAGCAGTTTTGAAACTCTCTTTTTCTAC TR:VR 157:4 67:1 chrUn_KI270442v1 353598 r_355_1 G [chr20:29208044[GTAGAAAAAGAGAGTTTCAAAACTGCTCTCAAAAGATAGGTTCAAAATTTTTGAGTTGAATGCGCACATCACAGAGCAGTTTCTCAGAATGCTTCTGTGTAGTTTTTATGTGAAGATATTTCCTTTTCCACCATAGGCACCATTGGAGCGCTTTGCGGCCAGTGGTAGAAAAACAAATATCTTCATATAAAATCTAGGCAGAAACAATCTGAGAAACTTCTTTGTGATGTGTGCTTTCATCTCACAGAGTTAAACCTTTGTTTTGATTGAGCAGTTTTGAAACTCTTTTCATCTCACAGAGTTAAACCTTTCTTTTGATTGAGCAG . Too_low_VAF SVTYPE=BND;MATEID=r_355_0;SVINSLEN=325;SVINSSEQ=GTAGAAAAAGAGAGTTTCAAAACTGCTCTCAAAAGATAGGTTCAAAATTTTTGAGTTGAATGCGCACATCACAGAGCAGTTTCTCAGAATGCTTCTGTGTAGTTTTTATGTGAAGATATTTCCTTTTCCACCATAGGCACCATTGGAGCGCTTTGCGGCCAGTGGTAGAAAAACAAATATCTTCATATAAAATCTAGGCAGAAACAATCTGAGAAACTTCTTTGTGATGTGTGCTTTCATCTCACAGAGTTAAACCTTTGTTTTGATTGAGCAGTTTTGAAACTCTTTTCATCTCACAGAGTTAAACCTTTCTTTTGATTGAGCA TR:VR 157:4 67:1 chr3 14912579 d_1531 A . Too_small_size END=14912618;SVTYPE=DEL;SVLEN=-39 TR:VR 50:23 17:0 chr3 86790844 r_400 T . PASS END=86883291;SVTYPE=DUP;SVLEN=92447 TR:VR 84:12 40:0 chr5 56259069 d_1815 G . Too_small_size END=56259110;SVTYPE=DEL;SVLEN=-41 TR:VR 41:13 13:0 chr7 111594639 r_506_0 T TTGA]chr7:111904034] . PASS SVTYPE=BND;MATEID=r_506_1;SVINSLEN=3;SVINSSEQ=TGA TR:VR 96:12 27:0 chr7 111904034 r_506_1 A ATCA]chr7:111594639] . PASS SVTYPE=BND;MATEID=r_506_0;SVINSLEN=3;SVINSSEQ=TCA TR:VR 96:12 27:0 chr7 70630792 r_501 C . PASS END=70699626;SVTYPE=DUP;SVLEN=68834 TR:VR 81:16 34:0 chr9 694292 r_544 C . PASS END=724859;SVTYPE=DUP;SVLEN=30567 TR:VR 77:14 23:0 chrUn_KI270442v1 253695 i_1685 C . Too_low_VAF END=253695;SVTYPE=INS;SVINSLEN=337;SVINSSEQ=TAACAACTGCCCAGCTTTGAGGAAATCTGAAATAGAGTACTATGCTATGTTGGCTAAAACTGGTGTCCATCACTACAGTGGCAATAATATTGAACTGGGCACAGCATGCGGGAAAATACTACAGAGTGTGCACACTGGCTATCATTGATCCAGGTGACTCTGACATCATTAGAAGCATGCCAGAACAGACTGGTGAAAAGTAAACCTTTTCACCTACAAAATTTCACCTGCAAACCTTAAACCTGCAAAATTTTCCTTTAATAAAATTTGCTTGTTTTAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA TR:VR 81:3 35:0 chrY 56839171 d_2387 G . Too_low_VAF END=56839318;SVTYPE=DEL;SVLEN=-147;SVINSLEN=78;SVINSSEQ=TGAGGTACAACTTGTCAAAGCTCTGCCTACAAGGGGTTTGCTATGTATCTCTGCACTGATCATATAGGTCATGTATCT TR:VR 386:5 109:1 chr1 227398710 d_217 T . PASS END=227399339;SVTYPE=DEL;SVLEN=-629 TR:VR 47:18 21:0 chr11 99881642 i_227 A . PASS END=99881645;SVTYPE=INS;SVINSLEN=69;SVINSSEQ=TTTTGAATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTT TR:VR 42:12 15:0 chr14 104215716 i_347 T . PASS END=104215717;SVTYPE=INS;SVINSLEN=446;SVINSSEQ=CAGTGTGTAGGGAAGTGAGTGTGGGGGTGAGTGTGTGTGGGGAGATGAATGTGTGGGAGGTGTGAGTGTGTAGGGAGGTCAGTGTGTAGGGAAGTGAGTGTGTAGGGAGGTGAGTGTGTGGGGAGATGAATGTGTGGGGAGGGTAGGGGGTGAGTGTGTGGGGAGATGAATGTGTGGGGAGGTGAGTGTGTAGGGAGGTGAGTGTGTAGGGAGGTGAGTGTGTAGGGGGAGTGTGTGAGTGTGAATGTGGGGAGGTGAGTGTGTAGGGAGGGTGAGTGTGTAGGGGGTGAGTGTGTGGGGAGATGAATGTGTGGGGAGGTGAGTGTGTAGGGGGCGAGTGTGTAGGGAGGCGAGTGTGTAGGGGGAGGTGAGTGTGTAGGGAAGTGAGTGTGTGTGGAGATGAATGTGTGGGGAGGCAGTGTGTAGGGAGAGAGTGTGGCCCACCA TR:VR 34:5 19:0 chr15 91743235 r_205_0 T ]chr9:92057679]C . PASS SVTYPE=BND;MATEID=r_205_1 TR:VR 94:21 32:0 chr9 92057679 r_205_1 C C[chr15:91743235[ . PASS SVTYPE=BND;MATEID=r_205_0 TR:VR 94:21 32:0 chr2 43895442 r_297 C . PASS END=43968240;SVTYPE=DUP;SVLEN=72798 TR:VR 82:12 35:0 chr20 29230559 r_356_0 T TAAAGCTTCTGTCTGGTTTTTATGTGAAGATATGTCTTTTTCACCATAGGTCACAAATGACTAAGAAATACCCCTTTGCAGATTGAACAAAAAGACGTTTCCAAATTGCTCAATGAAAAGACAGGTTCAACTCT[chr22:12434544[ . Too_low_VAF SVTYPE=BND;MATEID=r_356_1;SVINSLEN=133;SVINSSEQ=AAAGCTTCTGTCTGGTTTTTATGTGAAGATATGTCTTTTTCACCATAGGTCACAAATGACTAAGAAATACCCCTTTGCAGATTGAACAAAAAGACGTTTCCAAATTGCTCAATGAAAAGACAGGTTCAACTCT TR:VR 170:3 49:0 chr22 12434544 r_356_1 G ]chr20:29230559]AGAGTTGAACCTGTCTTTTCATTGAGCAATTTGGAAACGTCTTTTTGTTCAATCTGCAAAGGGGTATTTCTTAGTCATTTGTGACCTATGGTGAAAAAGACATATCTTCACATAAAAACCAGACAGAAGCTTTG . Too_low_VAF SVTYPE=BND;MATEID=r_356_0;SVINSLEN=133;SVINSSEQ=AGAGTTGAACCTGTCTTTTCATTGAGCAATTTGGAAACGTCTTTTTGTTCAATCTGCAAAGGGGTATTTCTTAGTCATTTGTGACCTATGGTGAAAAAGACATATCTTCACATAAAAACCAGACAGAAGCTTT TR:VR 170:3 49:0 chr3 152326778 i_1112 A . Too_small_size END=152326778;SVTYPE=INS;SVINSLEN=37;SVINSSEQ=TTATTTATTTATTTATTTATTTATTTATTTATTTATT TR:VR 65:16 12:0 chr7 111645754 r_507 T . PASS END=111819068;SVTYPE=DUP;SVLEN=173314 TR:VR 118:14 25:0 chr7 71072814 d_1959 A . PASS END=71072993;SVTYPE=DEL;SVLEN=-179 TR:VR 45:26 13:0 chr8 19628069 d_2006 A . PASS END=19628168;SVTYPE=DEL;SVLEN=-99 TR:VR 27:18 15:0 chr9 70306941 r_549 A . PASS END=70414829;SVTYPE=DUP;SVLEN=107888 TR:VR 105:18 25:0 chrUn_KI270519v1 85872 i_1692 T . PASS END=85872;SVTYPE=INS;SVINSLEN=494;SVINSSEQ=CTTCACATAAATACTACACAGAAGCATTCTGAGAAACTTCCTTGTGATATATGCATTCATCTCCCAGAGATAAAACTTTCTTTTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTACTCCCAACTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAACTTTCTTTTGACTGAGCAGCTTTGAAGCACTCTTTTTGTAGAATCTGCAAGTGGATATTTGGAGACCTTTGTGGCTTATGGTGGAAAGAGAAATACC TR:VR 95:5 28:0 chr1 2281431 i_12 C . PASS END=2281431;SVTYPE=INS;SVINSLEN=567;SVINSSEQ=CCGAGAAGACAGGCGGAGGCGGAGATCTTCAGAGAGAGGACGCCCGAGAAGACAGGCGGTGGCGGAGATCTTCAGAGAGAGGACGCCCCGAGAAGACAGGCGGTGGCGGAGATCTTCAGAGAGAGAGATGCCCGAGAAGACAGGCGGCGGCGGCGATCTTCAGAGAGAGGAAGCCCGAGAAGACAGGCGGCGGCGGCGATCTTCAGAGAGAGGACACCCGAGAAGACAGGCGGCGGCGGCGATCTTCAGAGAGAGGACGCCCCCGAGAAGACAGGCGGCGGCGGCGATCTTCAGAGAGAGGACGCCCGAGAAGACAGAAGGCGGCGGCGATCTTCAGAGAGGACGCCCGAGAAGACAGGCGGCGGCGGCGATCTTCAGAAGAGAGAGGACGCCCCGAGAAGACAGGCGGCGGCGGCGATCTTCAGGAGAGAGGACGCCCGAGAAGACAGGCGGCGGCGGCGATCTTCAGAGAGCGGACGCCCGAGAGGACAGGCGGCGGCGGAGATCTTCAGAGAGCGGACGCCCGAGAGGACAGGCGGCGGCGGAGATCTTCAGAGAGAGGACGCC TR:VR 32:3 6:0 chr10 67273535 d_312 C . Too_small_size END=67273577;SVTYPE=DEL;SVLEN=-42 TR:VR 35:19 17:0 chr12 37621798 d_421 A . PASS END=37622423;SVTYPE=DEL;SVLEN=-625;SVINSLEN=127;SVINSSEQ=CAGAAGCATTCTCAGAAATTTCTTTGCGATGTGTGCATTCAACTCAGAGAGTTGAACATTCGTATTCATACAGCAGTTTTAAAACAGTCTTTTTGTAGAATCTGCAAGTGGATGTTTGGAGCACTTT TR:VR 37:15 18:0 chr12 7222475 r_121_0 G [chr16:30314607[TCTCAT . PASS SVTYPE=BND;MATEID=r_121_1;SVINSLEN=5;SVINSSEQ=TCTCA TR:VR 77:16 23:0 chr16 30314607 r_121_1 T [chr12:7222475[TGAGAT . PASS SVTYPE=BND;MATEID=r_121_0;SVINSLEN=5;SVINSSEQ=TGAGA TR:VR 77:16 23:0 chr14 77713395 i_340 A . PASS END=77713395;SVTYPE=INS;SVINSLEN=318;SVINSSEQ=GGCTGGACACGGTGACTCACACCTGTAATCCCAGCACTCTGGGAGGCCGAAGCAGGCAGATCACTTGAGGCGAAGAGTTTGAGACCAGCCTGGGCAACATTGTGAAACCCCGTCTCTACTATAAAAGTACAAAAATTAGCTGGGCGTGGTGGTGTATGCCTATAGTCCCAGCTACTCAGAGGTTGAGGCAGGAGAATTGCTCGAACCCAGGAGGTAGAGGTTGCATTGAGCTGAGATCGTGCCACTAAACTCCTGGGTGACACAGCGAGACTTGGTCTAAAATAAATAATAATAATAATAATGAAACAAACAAACAAA TR:VR 39:3 13:0 chr15 92180996 r_206_0 T [chr2:44091831[C . PASS SVTYPE=BND;MATEID=r_206_1 TR:VR 110:22 27:0 chr2 44091831 r_206_1 C [chr15:92180996[C . PASS SVTYPE=BND;MATEID=r_206_0 TR:VR 110:22 27:0 chr19 1528971 r_263 C . PASS END=1531335;SVTYPE=DEL;SVLEN=-2364 TR:VR 23:16 14:0 chr19 6982560 r_267_0 T [chr3:10004[GAGGAGTTAGGGTGAGGTGAGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGAGTGAGGGTGAGGGTGAGGGTGAGGGA . Too_low_VAF SVTYPE=BND;MATEID=r_267_1;SVINSLEN=77;SVINSSEQ=GAGGAGTTAGGGTGAGGTGAGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGAGTGAGGGTGAGGGTGAGGGTGAGGG TR:VR 418:4 173:0 chr3 10004 r_267_1 A [chr19:6982560[CCCTCACCCTCACCCTCACCCTCACTCCTCACCCTCACCCTCACCCTCACCCTCACCTCACCTCACCCTAACTCCTCA . Too_low_VAF SVTYPE=BND;MATEID=r_267_0;SVINSLEN=77;SVINSSEQ=CCCTCACCCTCACCCTCACCCTCACTCCTCACCCTCACCCTCACCCTCACCCTCACCTCACCTCACCCTAACTCCTC TR:VR 418:4 173:0 chr2 218206111 r_340 G . PASS END=218649003;SVTYPE=DUP;SVLEN=442892 TR:VR 96:15 34:0 chr20 29231446 i_869 T . Too_small_size;Too_low_VAF END=29231449;SVTYPE=INS;SVINSLEN=17;SVINSSEQ=GGTTTAACTCCGGGAGA TR:VR 114:4 37:0 chr21 7944775 d_1392 T . Too_small_size;Too_low_VAF END=7944804;SVTYPE=DEL;SVLEN=-29 TR:VR 451:4 172:1 chr5 179364586 i_1339 A . PASS END=179364586;SVTYPE=INS;SVINSLEN=157;SVINSSEQ=GAGGGAGAGAGGGAGAGGGAGAGAGGGAGAGGGAGAGACGGAGAGGGGGAGGGAGAGGGAGAGGGAGACGGAGGAGGGAGGGAGAGGGAGAGGGACGGAGGGAGAGGGAGGGAGAGAGAGAGGGGGAGGAGAGAGAGGGAGAGACGGAGGGAGAGGG TR:VR 33:5 12:0 chr7 117938248 d_1975 C . PASS END=117938643;SVTYPE=DEL;SVLEN=-395 TR:VR 43:20 15:0 chr8 20091121 r_518 G . PASS END=20100876;SVTYPE=DEL;SVLEN=-9755 TR:VR 22:17 17:0 chr9 7254402 r_548 G . PASS END=7383219;SVTYPE=DUP;SVLEN=128817 TR:VR 102:13 35:0 chrX 13673303 r_574_0 G [chrX:117006143[C . PASS SVTYPE=BND;MATEID=r_574_1 TR:VR 87:13 38:0 chrX 117006143 r_574_1 C [chrX:13673303[C . PASS SVTYPE=BND;MATEID=r_574_0 TR:VR 87:13 38:0 chrX 829933 d_2264 G . PASS END=831644;SVTYPE=DEL;SVLEN=-1711 TR:VR 38:10 13:0 chr1 229442593 d_218 G . PASS END=229442679;SVTYPE=DEL;SVLEN=-86 TR:VR 44:21 10:0 chr1 51377868 r_19 T . PASS END=51832513;SVTYPE=DUP;SVLEN=454645 TR:VR 128:14 27:0 chr10 67465136 r_74_0 T T[chr4:46795300[ . Too_low_VAF SVTYPE=BND;MATEID=r_74_1 TR:VR 78:3 29:0 chr4 46795300 r_74_1 C ]chr10:67465136]C . Too_low_VAF SVTYPE=BND;MATEID=r_74_0 TR:VR 78:3 29:0 chr11 48831451 d_356 T . PASS END=48831567;SVTYPE=INS;SVINSLEN=116;SVINSSEQ=GGAATGCTTTTAGTCCTATGCTGGAAAAGGATATATCTTCACATAAAAACTAGAGAGAAGCATTCTCAGAAACTTCCTTGTGATGTGTCCATTCAACTCACAGAGTTGAATCTTTG TR:VR 52:7 12:0 chr12 73594723 d_438 T . PASS END=73595083;SVTYPE=DEL;SVLEN=-360 TR:VR 34:12 13:0 chr14 77713762 r_169_0 A AGAATGAGGCATGGCTG]chr14:77714300] . PASS SVTYPE=BND;MATEID=r_169_1;SVINSLEN=16;SVINSSEQ=GAATGAGGCATGGCTG TR:VR 41:3 13:0 chr14 77714300 r_169_1 C CCAGCCATGCCTCATTC]chr14:77713762] . PASS SVTYPE=BND;MATEID=r_169_0;SVINSLEN=16;SVINSSEQ=CAGCCATGCCTCATTC TR:VR 41:3 13:0 chr14_GL000225v1_random 44269 r_177 C . Too_low_VAF END=53356;SVTYPE=DUP;SVLEN=9087;SVINSLEN=2;SVINSSEQ=AG TR:VR 817:4 407:0 chr15 93333369 i_453 C . PASS END=93333369;SVTYPE=INS;SVINSLEN=92;SVINSSEQ=CTATTACAACCTGGTGGGGGATGCTCTCGTGCGGGCGGTGCATGTCTATGTACAACCTGGTGGGGGATGCTCTCGTGCGGGCGGTGCATGTC TR:VR 52:5 11:0 chr18 167400 r_253 T . PASS END=369857;SVTYPE=DUP;SVLEN=202457 TR:VR 79:14 35:0 chr19 15316033 d_1044 G . PASS END=15316183;SVTYPE=DEL;SVLEN=-150 TR:VR 37:17 9:0 chr19 6982560 r_268_0 T ]chr3:198174527]GAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTGAGGGTTAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGT . Too_low_VAF SVTYPE=BND;MATEID=r_268_1;SVINSLEN=257;SVINSSEQ=GAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTGAGGGTTAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGG TR:VR 394:6 152:0 chr3 198174527 r_268_1 T TCCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACCCTAACCCTCACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTCACCCTCACCCTCACCCTCACCCTCACCCTC[chr19:6982560[ . Too_low_VAF SVTYPE=BND;MATEID=r_268_0;SVINSLEN=257;SVINSSEQ=CCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACCCTAACCCTCACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACCCTCACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTCACCCTCACCCTCACCCTCACCCTCACCCTC TR:VR 394:6 152:0 chr2 1530739 d_1083 A . PASS END=1530994;SVTYPE=DEL;SVLEN=-255;SVINSLEN=1;SVINSSEQ=T TR:VR 50:3 15:0 chr2 219082195 d_1274 A . Too_small_size END=219082233;SVTYPE=DEL;SVLEN=-38;SVINSLEN=2;SVINSSEQ=CC TR:VR 44:14 17:0 chr2 45459053 d_1105 C . PASS END=45459712;SVTYPE=DEL;SVLEN=-659 TR:VR 48:14 18:0 chr3 152739237 d_1570 C . PASS END=152740160;SVTYPE=DEL;SVLEN=-923 TR:VR 79:39 21:0 chr3 87152214 d_1545 T . PASS END=87152261;SVTYPE=DEL;SVLEN=-47 TR:VR 46:15 20:0 chr9 115770312 r_556 T . PASS END=115775216;SVTYPE=DUP;SVLEN=4904 TR:VR 50:11 19:0 chrX 13707540 r_575_0 T T]chrX:117011026] . PASS SVTYPE=BND;MATEID=r_575_1 TR:VR 88:17 32:0 chrX 117011026 r_575_1 C C]chrX:13707540] . PASS SVTYPE=BND;MATEID=r_575_0 TR:VR 88:17 32:0 chr1 148807109 d_191 A . PASS END=148807250;SVTYPE=DEL;SVLEN=-141 TR:VR 39:6 20:0 chr1 51834897 r_20 C . PASS END=51841182;SVTYPE=DUP;SVLEN=6285 TR:VR 73:7 12:0 chr10 70219239 d_313 T . PASS END=70220860;SVTYPE=DEL;SVLEN=-1621 TR:VR 38:21 17:0 chr11 48831794 d_357 G . PASS END=48831885;SVTYPE=INS;SVINSLEN=342;SVINSSEQ=GAATGCTTTTAGTCCTATGCTGGAAAAGGATATATCTTCACATAAAAACTAGAGAGAAGCATTCTCAGAAACTTCCTTGTGATGTGTCCATTCAACTCACAGAGTTGAATCTTTGTTTTGATACAGCAGCTTTGAAACTCTCTTTCTGTGGAATCTGCAAGCGGATATTTGGAGGGCTTTGAGGCCTAGGGTGGAAAAGGAAATATCTTCACAGAAAAACTAGACAGAAGCATTCTCAGAGATATTTGGAGCACTTTCAGACCAATGATGGAAAGGAAATATCTTCACATATAAACTAGACAGAAGCATTCTCAGAAACATCTTTGAAATGTGTGATTTCAA TR:VR 52:30 12:0 chr15 93818145 i_454 T . PASS END=93818145;SVTYPE=INS;SVINSLEN=74;SVINSSEQ=AAAAAAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAA TR:VR 74:13 7:0 chr17 71854703 r_249_0 A [chr17:73243198[A . PASS SVTYPE=BND;MATEID=r_249_1 TR:VR 94:10 34:0 chr17 73243198 r_249_1 A [chr17:71854703[A . PASS SVTYPE=BND;MATEID=r_249_0 TR:VR 94:10 34:0 chr2 46823246 r_298 G . PASS END=84359864;SVTYPE=DUP;SVLEN=37536618 TR:VR 86:8 28:0 chr3 154688594 d_1571 A . PASS END=154688652;SVTYPE=DEL;SVLEN=-58 TR:VR 53:19 15:0 chr5 57547366 d_1816 C . Too_small_size END=57547401;SVTYPE=DEL;SVLEN=-35 TR:VR 38:15 13:0 chr7 119204382 d_1977 T . Too_small_size END=119204417;SVTYPE=DEL;SVLEN=-35 TR:VR 31:13 13:0 chr7 26574254 r_494 T . PASS END=26728120;SVTYPE=DUP;SVLEN=153866;SVINSLEN=1;SVINSSEQ=A TR:VR 96:16 25:0 chr7 72424892 r_502 T . PASS END=72426242;SVTYPE=DEL;SVLEN=-1350 TR:VR 38:16 11:0 chr8 22936672 r_519 A . PASS END=22966463;SVTYPE=DUP;SVLEN=29791 TR:VR 40:3 24:0 chrY 56839779 d_2388 C . Too_low_VAF END=56840203;SVTYPE=DEL;SVLEN=-424;SVINSLEN=82;SVINSSEQ=ACCCAGGTGATGTAACAATTTTCTGGTATTTGTCTACAGGGTGCTTTGTGACATATCTTTGCACTGATCACCCAAGAGATGT TR:VR 314:5 95:1 chr1 15093182 d_48 T . PASS END=15093244;SVTYPE=DEL;SVLEN=-62 TR:VR 37:11 11:0 chr1 230335108 d_220 C . PASS END=230335581;SVTYPE=DEL;SVLEN=-473;SVINSLEN=101;SVINSSEQ=AGATACACAGATACAGACACATACACATACATACACAGGTACACATACAGACACACACAGACACACAGACACACAGACTTACAGACACACACAGATATACA TR:VR 45:4 20:0 chr12 76046246 r_130_0 A [chr3:38408054[T . PASS SVTYPE=BND;MATEID=r_130_1 TR:VR 92:14 33:0 chr3 38408054 r_130_1 T [chr12:76046246[T . PASS SVTYPE=BND;MATEID=r_130_0 TR:VR 92:14 33:0 chr15 94520272 r_207_0 A [chr2:63495652[T . PASS SVTYPE=BND;MATEID=r_207_1 TR:VR 134:12 30:0 chr2 63495652 r_207_1 T [chr15:94520272[T . PASS SVTYPE=BND;MATEID=r_207_0 TR:VR 134:12 30:0 chr17 71988521 r_250_0 T T]chr17:73243183] . PASS SVTYPE=BND;MATEID=r_250_1 TR:VR 74:12 31:0 chr17 73243183 r_250_1 T T]chr17:71988521] . PASS SVTYPE=BND;MATEID=r_250_0 TR:VR 74:12 31:0 chr22 31119662 d_1494 G . PASS END=31120973;SVTYPE=DEL;SVLEN=-1311 TR:VR 22:11 18:0 chr5 57776445 d_1817 A . PASS END=57779606;SVTYPE=DEL;SVLEN=-3161 TR:VR 41:19 18:0 chr8 27986838 r_520_0 G [chr8:127806019[CAATAGAC . PASS SVTYPE=BND;MATEID=r_520_1;SVINSLEN=7;SVINSSEQ=CAATAGA TR:VR 99:19 23:0 chr8 127806019 r_520_1 C [chr8:27986838[TCTATTGC . PASS SVTYPE=BND;MATEID=r_520_0;SVINSLEN=7;SVINSSEQ=TCTATTG TR:VR 99:19 23:0 chr9 115802144 i_1598 T . PASS END=115802196;SVTYPE=INS;SVINSLEN=294;SVINSSEQ=TGACTTCTGAGATTTTGGTGCACACATCACCCGAGCAGTGTACACTATATCCAACGTGTAGTCTTTTATCCCTCACCCCCGTCCCACCTTTTTCCCCAAGTCCCCAACGTCCATTGTATCATTCTTATGCCTTTGCATCTTCATAGCTTAGCTCCCACTTATCAGTGAGAACATACGAAGTTTAGTTTTCCGTTCCTGAGAAACTCCTCACTTTAGCATGTGGACCTCTTTAGCTTTATAATCTCAATGTTTTTCCCCAGTTTCTCTTGTTCTTTCCTCCTCCCACTCTTGTCC TR:VR 41:32 13:0 chr9 77558007 d_2090 T . Too_small_size END=77558055;SVTYPE=DEL;SVLEN=-48;SVINSLEN=1;SVINSSEQ=A TR:VR 35:12 12:0 chr1 151416191 d_192 C . PASS END=151416248;SVTYPE=DEL;SVLEN=-57 TR:VR 56:22 18:0 chr1 55196226 d_58 T . Too_small_size END=55196261;SVTYPE=DEL;SVLEN=-35 TR:VR 63:13 16:0 chr10 72634249 d_314 T . PASS END=72634372;SVTYPE=DEL;SVLEN=-123 TR:VR 30:9 9:0 chr11 48832129 d_359 T . PASS END=48832233;SVTYPE=INS;SVINSLEN=105;SVINSSEQ=GGGAATGCTTTTAGTCCTATGCTGGAAAAGGATATATCTTCACATAAAAACTAGAGAGAAGCATTCTCAGAAACTTCCTTGTGATGTGTCCATTCAACTCACAGA TR:VR 53:12 11:0 chr12 1058646 r_113_0 C [chr7:135137653[A . PASS SVTYPE=BND;MATEID=r_113_1 TR:VR 106:9 26:0 chr7 135137653 r_113_1 A [chr12:1058646[A . PASS SVTYPE=BND;MATEID=r_113_0 TR:VR 106:9 26:0 chr12 76059018 r_131_0 C C]chr3:38423805] . PASS SVTYPE=BND;MATEID=r_131_1 TR:VR 93:14 30:0 chr3 38423805 r_131_1 G G]chr12:76059018] . PASS SVTYPE=BND;MATEID=r_131_0 TR:VR 93:14 30:0 chr15 94660519 d_779 T . PASS END=94660695;SVTYPE=DEL;SVLEN=-176 TR:VR 79:13 19:0 chr2 1532820 d_1084 C . PASS END=1532901;SVTYPE=DEL;SVLEN=-81 TR:VR 48:5 14:0 chr21 45531071 i_983 G . PASS END=45531072;SVTYPE=INS;SVINSLEN=130;SVINSSEQ=AGGTGGCGGGAGCCTCCGGGGGAAGGATCCACGGGGCAGGGGAGGTGGCAGGGAGCCTCCGGGGGAAGGATCCACGGGGCAGGGGGCGGGGAGGGGGAGCCTCCGGGGGAAGGATCCACGGGGCAGGGGG TR:VR 54:3 12:0 chr3 155702275 r_423 T . PASS END=155709697;SVTYPE=DUP;SVLEN=7422;SVINSLEN=13;SVINSSEQ=CTGCTAGTCAACA TR:VR 85:13 21:0 chr5 57934948 r_464 G . PASS END=57967248;SVTYPE=DUP;SVLEN=32300 TR:VR 78:13 28:0 chr7 120126000 d_1978 C . Too_small_size END=120126041;SVTYPE=DEL;SVLEN=-41 TR:VR 29:12 16:0 chr7 74479681 d_1962 T . PASS END=74479880;SVTYPE=DEL;SVLEN=-199 TR:VR 37:11 21:0 chr8 29638455 d_2008 C . PASS END=29638504;SVTYPE=DEL;SVLEN=-49 TR:VR 39:16 10:0 chr9 792500 r_545 C . PASS END=816209;SVTYPE=DUP;SVLEN=23709;SVINSLEN=4;SVINSSEQ=CCGT TR:VR 59:6 24:0 chr1 1266773 i_4 G . PASS END=1266773;SVTYPE=INS;SVINSLEN=169;SVINSSEQ=CCGAGATTGCGCCACTGCACTCCAGCCTGGAGACACAGCGAGACTCCGTCTCAAGAAAAAAAAAAAAAAAAAAAAAAAGGCAGCTGCAACTCAGGAACAGAGAACAGCCCCCTCAGACACAAGGCTGACGGCCCACCAGGGAGAGGCTTCTAAAACTTACCGTGAAGTC TR:VR 43:17 14:0 chr1 55321477 r_21_0 A A]chr12:43912105] . PASS SVTYPE=BND;MATEID=r_21_1 TR:VR 81:13 34:0 chr12 43912105 r_21_1 C C]chr1:55321477] . PASS SVTYPE=BND;MATEID=r_21_0 TR:VR 81:13 34:0 chr12 1071330 r_114_0 G G]chr12:1080156] . PASS SVTYPE=BND;MATEID=r_114_1 TR:VR 56:7 18:0 chr12 1080156 r_114_1 A A]chr12:1071330] . PASS SVTYPE=BND;MATEID=r_114_0 TR:VR 56:7 18:0 chr12 79125154 r_132_0 C C]chr12:85308653] . PASS SVTYPE=BND;MATEID=r_132_1 TR:VR 80:15 19:0 chr12 85308653 r_132_1 T T]chr12:79125154] . PASS SVTYPE=BND;MATEID=r_132_0 TR:VR 80:15 19:0 chr14 104979543 r_173 A . PASS END=105338254;SVTYPE=DUP;SVLEN=358711 TR:VR 74:6 22:0 chr15 95641051 r_208_0 C C]chr15:96136947] . PASS SVTYPE=BND;MATEID=r_208_1 TR:VR 117:20 39:0 chr15 96136947 r_208_1 G G]chr15:95641051] . PASS SVTYPE=BND;MATEID=r_208_0 TR:VR 117:20 39:0 chr19 17316709 i_678 C . PASS END=17316709;SVTYPE=INS;SVINSLEN=68;SVINSSEQ=AGTGAGCCAAGATCGCGCCACTGCACGCCAGTCTGGGCAACAAGAGCAAACCTCCATCTCAAAAAAAT TR:VR 32:13 16:0 chr2 221366399 d_1277 G . PASS END=221366619;SVTYPE=DEL;SVLEN=-220;SVINSLEN=201;SVINSSEQ=ACAAGGGGACCCCCCAGTGCCTGGATTAAGGGGACAAGGAGACCTCCCCAAGTACCTGGATTAAGGGGACAAGGGGACCCTCCAGTGCCTGGTTAAGGGGACAAGGAGACCCCCAGTGCCTGGATTAAGGGGACAAGGGGGACCCTCAGTGCCTGGATTAAGGGGACAAGAGGACCCCCAGTACCCTGGATTAAGGGGAAA TR:VR 53:4 16:0 chr2 49413710 d_1106 G . Too_small_size END=49413753;SVTYPE=DEL;SVLEN=-43 TR:VR 58:13 13:0 chr3 110397975 r_404 G . PASS END=182151041;SVTYPE=DUP;SVLEN=71753066 TR:VR 122:13 25:0 chr3 155813974 i_1115 T . PASS END=155813974;SVTYPE=INS;SVINSLEN=494;SVINSSEQ=AAGAGATAAAATTGCCCCGGGCGTGGTGGCTCATGCCTATAATCCCAGCACTTTGGGAGGCCGAGGCGGGCAGATCACAAGGTCAGGAGATCGAGACCATCCTGGCTAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCAGGCACCTGTAGTCCCAGCTACTTGGGAGGCTGGGGCAGGAGAATGGCGTGAACCCAGGAGGCGGAGCTTGCAGTGAGCTGAGATCGCGCCACCGGACTCCAGCCTGGGTGACAGAGTGAGACTCCATCCCCCCCAAAAAAAAAAAGAGATAAATTGCAAGAAAAATAAAAAAAAAGATAACGAGAGTACCTATAGATTATAAAACTCTTAGCACCAACCAAAACATATGAATCATGATGCAAACAATGTGTTAATATACATGCATAAATCATGAGGAGACATCCAACAAACCAAATTGAGGGACATTTTTCAGGTTTCTTTTTTTTTGT TR:VR 74:8 13:0 chr6 32776975 d_1853 A . PASS END=32777058;SVTYPE=DEL;SVLEN=-83 TR:VR 46:32 12:0 chr7 123044990 r_508 T . PASS END=123082879;SVTYPE=DEL;SVLEN=-37889;SVINSLEN=3;SVINSSEQ=AAA TR:VR 48:13 31:0 chr8 31315195 r_521 A . PASS END=31364467;SVTYPE=DUP;SVLEN=49272 TR:VR 92:15 26:0 chr1 152202279 r_41 C . PASS END=152211269;SVTYPE=DUP;SVLEN=8990 TR:VR 85:5 19:0 chr12 37742486 i_275 A . PASS END=37742493;SVTYPE=INS;SVINSLEN=693;SVINSSEQ=ACAGTGTTTTCATAGAATCTTCAAAGGGATATACACAATGAATTGAGGTCTTTGGTGAAAAAAGAAATATATTCACATAAAAACTAGACAGAAACTTTCTGAGAAACTTCTTTTTGATGTTTGCATTCATCTGACAGAGTTAAACCTTTCTTTTGATTGAGCAATTTGGAAACAGTCTTTTTGTACAATACACACAGGAATATCCGTGAGCGGTTTGTGGCCTATGGTGAAAAAGGAAATATCTTTACATAAAAACTAGACAGAAGTATTCTGAGAAACATCTTTGTGATGTGTGCATTCATCTCACAGAGTTGAACTTTTCTTTTGATTAAGCAGTTTTGAAACAATCTTTTTCTAGAATCTGCACACGGATATTTGTGAGTGGTTTGAGGCCTATGGTGAAATAGGAAATATCTCCACGTAAAAACGAGACAGAAATTATGTAAAACTTCTTTGGGAAGTTTGCATTCATCTCACAGTGTTGACTATTTCTTTTCATTGATCAGTTTGGAAACAGTCTTTTTGTACAATCTGCAAAGGGATATTTCTGAGTGGTTTAAGAACTATGGTGAAAAAGGAAATATCTTCACTTAAAAACTAGGCAGAAGCATTCTGAGAAACTTCTTTGTGATATGTGCATTCATCTCATAGAGATGAATATGTCTTTTGATTGAGCAGTTTAGAAACAGATGT TR:VR 50:3 14:0 chr12 79125200 r_133_0 A [chr12:85288061[T . PASS SVTYPE=BND;MATEID=r_133_1 TR:VR 87:16 21:0 chr12 85288061 r_133_1 T [chr12:79125200[T . PASS SVTYPE=BND;MATEID=r_133_0 TR:VR 87:16 21:0 chr16_KI270728v1_random 330202 i_527 C . PASS END=330202;SVTYPE=INS;SVINSLEN=320;SVINSSEQ=CCAAATATACATTCACAGAAATGGACAAAAACAGTGTTTACAAGTTTTTGCATGTAAAAGAGAGAGGTGTAACTGTGTGAGCGGAATGTATACATAACAAAGCAGTTTCTCAGAAAGCTTCTTTATAGTTTTTATCTGAAGATATTTCTTTTTTCACCATAGTCCTCAATGCACTCCTAAAAGTCCCTTTGCAGATTCTAAAAATATACTGTTTCAAAACTGCTCACTGAAAAGAAAGGTTTAACTCTGAGGGATGAATGCACATATCACAAAGTGGTTTCTAGATAGTTTCCTTCTAGTTTTTATCCTGGGATATTTGC TR:VR 15:4 4:0 chr2 5022745 d_1092 C . Too_small_size END=5022729;SVTYPE=INS;SVINSLEN=14;SVINSSEQ=TACTACCACCACCT TR:VR 42:3 14:0 chr3 156249140 d_1572 T . PASS END=156249233;SVTYPE=DEL;SVLEN=-93 TR:VR 61:9 22:0 chr7 123856407 r_509 G . PASS END=123918563;SVTYPE=DUP;SVLEN=62156 TR:VR 89:14 35:0 chr8 137617330 d_2053 T . PASS END=137617948;SVTYPE=DEL;SVLEN=-618 TR:VR 64:15 14:0 chr9 120654679 r_557 G . PASS END=120689137;SVTYPE=DUP;SVLEN=34458 TR:VR 98:27 18:0 chrUn_KI270589v1 42249 d_2231 C . PASS END=42231;SVTYPE=INS;SVINSLEN=156;SVINSSEQ=TATTCCATTCCCCTCCATTCCGTTCCATTCCACTCCATTCCACTCCATTTTTTTCCATTCTACTCCATTCCATTCCATTCCTTTATTTCGAATGGATCTCACACTGTCAAAAAGACTGGGAGTGCAGTGGCAAAATCTTAGCTCACATTTCATTTT TR:VR 56:7 21:0 chr1 248946243 i_127 T . Too_low_VAF END=248946243;SVTYPE=INS;SVINSLEN=444;SVINSSEQ=GAGGGGGGACTGGGGTTAGGGTTAGGGGTTAGGGTTAGGGGTTGAGGGTTAAGGTTAGGGTTAGGGAGTTGAGTTGGGGGCCAGGGCCAGGGCCAGGGCTGGGGGCCAGGGCCAGGCCAGGTGCCAGGGCCAGGGCCAGGCCTGGCCAGTCCAGGGCCAGGGGCTGGGGGCTGGGGTTGGGCAGTGAGGGCCAGGCTGGGTGCCAGGGCCAGGCCAGGCCAGGCCAGGCTGGGGCCAGGGCCCAGGCCAGGCCAGGGTTGAGGCCAGGGCCAGGCTGCCAGGGCCAGTGGCCAGCCAGGCCAGGCCAGTCAGGGCCAGGCCAGGGCCAGGCCGCTGGCCAGGGCCAGGGCCAGGCCAGGGCCAGGGCCAGGGCCAGGAGCCAGGGCCAGCTGCCCAGCAGGGCCAGGGCCAGGGCCAGGCCAGGCCAGGCCAGGCCAGGCTTCA TR:VR 302:3 111:0 chr11 48832749 d_362 A . PASS END=48832774;SVTYPE=INS;SVINSLEN=272;SVINSSEQ=CCTTTCTTTTGATAGAGCAGTTTTGAAACACCCTTTTTGTAGAATTAGCAAGTGCATATTGGGAGGAATTTGAGGGCTACGGTGGAAAAGGAAATATCTTCACATAAGAACTAGACAGAAGCATTCTCAGAGATATTTGGAGCACTTTGAGGCCTACGGTGGAAAAGGAAATATGTTCACATAGAAACTACACAGTAGCAATCTCAGAAACATCTTGTAATGGTTGCAATCAACTCACACGTTTGAACCTTCCTTTTGATAGAGCAGTTTTG TR:VR 54:28 11:0 chr15 96133641 r_209_0 T ]chr3:43740908]A . PASS SVTYPE=BND;MATEID=r_209_1 TR:VR 94:20 32:0 chr3 43740908 r_209_1 A A[chr15:96133641[ . PASS SVTYPE=BND;MATEID=r_209_0 TR:VR 94:20 32:0 chr18 21511849 i_646 G . Too_small_size END=21511849;SVTYPE=INS;SVINSLEN=36;SVINSSEQ=TATTTTTGGTACAGACGGGGGTTTCACCATGTTAAC TR:VR 62:17 20:0 chr2 221366888 d_1278 G . PASS END=221366952;SVTYPE=DEL;SVLEN=-64 TR:VR 50:3 16:0 chr20 29283691 i_873 G . Too_low_VAF END=29283695;SVTYPE=INS;SVINSLEN=688;SVINSSEQ=TCCTCAGAGGGCTCAAAACTATCCTTTTGCAGATTCTACAAAAAGATTGTTTCCAAACTGCTAAACCAAAAGAAAGGTTCAACTCTATGGGATGAATGCACACATCACAAAGAAGTTTCTCAAAATGCTTCTGTCTAGTTTTTATGTGAAGATATTTCCTATTTCACCAAAGTTCTCAAAGGGCTCAAAACTATCTCTTTGCAGATTCCACAAAAAGACCATTTCCAAACTGCTCTATGAATAGTAAGGTTCAATTCTATCCAATGAATGAAAAAATCACAAAGAAGTTTCTCAAAAATTTTCTGTCTAGTTTTCATATGAGGATATTTCCTATTTCACCATAGTCCTCAAAGGGCTCAAAGTATCCCTTTGCACATTCTACAAAAAGACTGCTTCCAAACTGCTCAATCAAAAGAAAGGTTCAACCTTGTGCATTTGATGAACACATCACAAAGATGTTTATCAGAATCCTTCTGTCTAGTTTTTATGGGAAGATATCTCCTTTTTCACCATAGTTCTCAAACCTCTCACAAATATCCCTCTGCAGATTTTCAAAAAGATTGTTTCCAAAGTGCTCAATCAAAAGAAAGATTCACCTCTGTTAAGCGAATGCACACATCAGAAAGAAGTTTCTCAAAATGTTTCTGTCTAGTTTTAATGTGAAGATAATTCCTTTTTGACTTTAGTC TR:VR 72:3 21:0 chr22 36226348 r_387_0 A ]chr9:124924574]G . PASS SVTYPE=BND;MATEID=r_387_1 TR:VR 71:17 38:0 chr9 124924574 r_387_1 G G[chr22:36226348[ . PASS SVTYPE=BND;MATEID=r_387_0 TR:VR 71:17 38:0 chr3 157220189 r_424 T . PASS END=157223567;SVTYPE=DUP;SVLEN=3378 TR:VR 76:5 9:0 chr7 124218132 d_1979 T . PASS END=124220286;SVTYPE=DEL;SVLEN=-2154 TR:VR 32:9 17:0 chr7 34276568 d_1928 C . PASS END=34276915;SVTYPE=DEL;SVLEN=-347 TR:VR 34:20 12:0 chr7 75764767 d_1965 C . PASS END=75765778;SVTYPE=DEL;SVLEN=-1011 TR:VR 44:4 14:0 chr8 137852524 r_539 T . PASS END=137958261;SVTYPE=DUP;SVLEN=105737 TR:VR 157:17 26:0 chr9 120756482 r_558 G . PASS END=120815075;SVTYPE=DUP;SVLEN=58593 TR:VR 85:17 37:0 chr9 82977389 r_550 G . PASS END=83006046;SVTYPE=DUP;SVLEN=28657 TR:VR 86:13 21:0 chrX 143653778 d_2307 T . PASS END=143653915;SVTYPE=DEL;SVLEN=-137 TR:VR 32:6 10:0 chrX 24540319 r_577 A . PASS END=24546324;SVTYPE=DUP;SVLEN=6005 TR:VR 60:13 15:0 chrY 56839811 d_2393 G . Too_low_VAF END=56840235;SVTYPE=DEL;SVLEN=-424;SVINSLEN=149;SVINSSEQ=TCTACATGGGAATTTTCACATATCTCTACACTAATCCCCTAAGTGATGTAACCCTTGTCTAGGTTCAGCCTACTGGGGATTTCTGACATACCTATGCACTGATCACTGAGGTGATGTAAATCATTTCCAGGATTTTTGTACAGGGGACC TR:VR 302:5 92:1 chr1 58527772 d_59 A . Too_small_size END=58527816;SVTYPE=DEL;SVLEN=-44 TR:VR 49:15 14:0 chr10 133222491 d_336 G . PASS END=133223042;SVTYPE=DEL;SVLEN=-551;SVINSLEN=27;SVINSSEQ=CGTGTGTGTGTGTGTGAGAGCCCATCC TR:VR 40:4 13:0 chr11 48832747 d_363 G . PASS END=48833025;SVTYPE=DEL;SVLEN=-278;SVINSLEN=107;SVINSSEQ=AACATTCCTTATGATATCGCAGTTTTGAAACACTATTTTTGTAGAATCTGCAACTGGATATTTGGAGAGCTTTAAGGGCTATGATAGAAAAGGAAATATCTTCACCG TR:VR 54:29 11:0 chr12 108763396 i_287 C . PASS END=108763396;SVTYPE=INS;SVINSLEN=166;SVINSSEQ=GAGAGTTCTTCTATATTCTTGCTGATTTTCTGTCAAGTTATTCTATCAGTTATTGAGAGAAGAGTATTGAAATCTTAAACTATAGGGCCAGGCGCAATGGTGCATGCCTGTAATACCAGCACTTTTGGAGGCCGAAGTGGGTGAATCACTTGAGGTCAGGAGTTTG TR:VR 52:17 10:0 chr12 80735520 r_134 C . PASS END=80753636;SVTYPE=DUP;SVLEN=18116 TR:VR 59:9 13:0 chr14 105478384 d_522 G . Too_small_size END=105478426;SVTYPE=DEL;SVLEN=-42 TR:VR 40:26 8:0 chr14 86439389 r_171 T . PASS END=86480325;SVTYPE=DUP;SVLEN=40936 TR:VR 95:31 28:0 chr16_KI270728v1_random 334479 i_529 A . PASS END=334479;SVTYPE=INS;SVINSLEN=150;SVINSSEQ=AGAAAGGTAAAGTCTGTAAGATGAATGCACGCGTCACAAAGCAGTTTATCAGAAAGCTTCTTTCTAGTTTTTATGTGAAGATGATTTCTGTTTCACCATAGGCCTCAAAGCGCTCCCAAATATCCCTTTGCAGATAACTGCTGATTGAAA TR:VR 17:4 4:0 chr17 76808912 d_955 G . PASS END=76810477;SVTYPE=DEL;SVLEN=-1565 TR:VR 50:17 9:0 chr18 21757448 d_1011 T . PASS END=21757516;SVTYPE=DEL;SVLEN=-68 TR:VR 35:15 14:0 chr19 9480375 r_269 A . PASS END=9486737;SVTYPE=DUP;SVLEN=6362 TR:VR 51:6 17:0 chr2 56345182 r_299 G . PASS END=56347786;SVTYPE=DUP;SVLEN=2604 TR:VR 55:5 24:0 chr21 45924448 i_986 G . PASS END=45924448;SVTYPE=INS;SVINSLEN=926;SVINSSEQ=TAGAAACAGCACACGTAAGATCAGGTGTGCGTGAGGAGATGCGAACACCGGGAACAGTCGAGTGGATAGAAACAGCACACGTAAGATCGGGTGTGCGTGAGGAGATGCGAACACCGGGAACAGTCGCGTGGATAGAAACAGCACACGTAAGATCGGGTGTGCGTGAGGAGATGCGAACACCGGGAACAGTCGAGTGGGTAGAAACAGCACACGTAAGATCGGGTGTGCGTGAGGAGATGCGAACACCGGGAACAGTCGAGTGGGTAGAAACAGCACACGTAAGATCGGGTGTGCGTGAGGAGATGCGAACACCGGGAACAGTCGCGTGGATAGAAACAGCACACGTAAGATCGGGTGTGCACGAGGAGATGCGAACACCGGGAACAGTCGAGTGGATAGAAACAGCACACGTAAGATCGGGTGTGCGTGAGGAGATGCGAACACCGGGAACAGTCGAGTGGGTAGAAACAGCACACGTAAGATCGGGTGTGCACGAGGAGATGCGAACACCGGGAACAGTCGAGTGGGTAGAAACAGCACACGTAAGATCGGGTGTGCGTGAGGAGATGCGAACACCGGGAACAGTCGAGTGGGTAGAAACAGCACACGTAAGATCGAGGTGTGCACGAGGAGATGCGAACACCGGGAACAGTCGAGTGGATAGAAACAGCTTACGTAAGATCGGGTGTGCGTGAGGAGATGCGAACACCGGGAACAGTTGCGTGGATAGAAACAGCACACGTAAGATCGGGTGTGCACGAGGAGATGCGAACACCGGGAACAGTCGAGTGGATAGAAACAGCACACGTAAGATCGGGTGTGCGTGAGGAGATGCGAACACCGGGAACAGTCGAGTGGGTAGAAACAGCACACGTAAGATCGGGTGTGCACGAGGAGATGCGAACACCGGGAACAGTCGAGTGGAT TR:VR 47:9 15:0 chr22 36270680 r_388_0 T T[chr9:124920519[ . PASS SVTYPE=BND;MATEID=r_388_1 TR:VR 68:18 35:0 chr9 124920519 r_388_1 C ]chr22:36270680]C . PASS SVTYPE=BND;MATEID=r_388_0 TR:VR 68:18 35:0 chr3 112166385 r_405_0 G GCTGTTCGAATCTTGGCTCACAGCCCTCAATAAGTTATTT[chr4:75154801[ . Too_low_VAF SVTYPE=BND;MATEID=r_405_1;SVINSLEN=39;SVINSSEQ=CTGTTCGAATCTTGGCTCACAGCCCTCAATAAGTTATTT TR:VR 124:6 36:1 chr4 75154801 r_405_1 A ]chr3:112166385]AAATAACTTATTGAGGGCTGTGAGCCAAGATTCGAACAGA . Too_low_VAF SVTYPE=BND;MATEID=r_405_0;SVINSLEN=39;SVINSSEQ=AAATAACTTATTGAGGGCTGTGAGCCAAGATTCGAACAG TR:VR 124:6 36:1 chr3 15734735 r_391 G . PASS END=15748239;SVTYPE=DUP;SVLEN=13504 TR:VR 54:8 28:0 chr4 49649308 d_1694 G . PASS END=49649307;SVTYPE=INS;SVINSLEN=111;SVINSSEQ=GAATAGAATGCCATGGGATCAACCTGGAGTGGAAGCAGTATAGAATGTAATGGAATGTAATGGAATGGAATGGAAACAACCTGATGTGGAATGGAATGGGATAACCGGAGA TR:VR 212:14 59:0 chr5 20293879 d_1788 G . PASS END=20295138;SVTYPE=DEL;SVLEN=-1259 TR:VR 41:10 12:0 chr7 124255253 d_1980 A . PASS END=124255327;SVTYPE=DEL;SVLEN=-74 TR:VR 38:13 16:0 chr7 76168452 d_1966 T . Too_small_size END=76168489;SVTYPE=DEL;SVLEN=-37 TR:VR 47:12 14:0 chr8 138368358 r_540 C . PASS END=141005763;SVTYPE=DEL;SVLEN=-2637405 TR:VR 121:13 38:0 chr9 121385396 r_559 G . PASS END=121388846;SVTYPE=DEL;SVLEN=-3450 TR:VR 44:28 18:0 chr1 24927877 r_8_0 T ]chr8:11847316]T . PASS SVTYPE=BND;MATEID=r_8_1 TR:VR 79:21 22:0 chr8 11847316 r_8_1 T T[chr1:24927877[ . PASS SVTYPE=BND;MATEID=r_8_0 TR:VR 79:21 22:0 chr1 58706557 d_60 A . PASS END=58707520;SVTYPE=DEL;SVLEN=-963 TR:VR 36:15 11:0 chr10 75408936 r_75 A . PASS END=75561794;SVTYPE=DEL;SVLEN=-152858;SVINSLEN=3;SVINSSEQ=TTC TR:VR 63:7 35:0 chr12 109368273 d_446 A . Too_small_size END=109368309;SVTYPE=DEL;SVLEN=-36 TR:VR 34:13 7:0 chr12 80855895 d_440 T . PASS END=80856223;SVTYPE=DEL;SVLEN=-328 TR:VR 36:13 10:0 chr14 87614523 d_512 T . PASS END=87614579;SVTYPE=DEL;SVLEN=-56 TR:VR 41:30 19:0 chr16 34800965 r_231_0 A [chr7:62275023[TGAG . Too_low_VAF SVTYPE=BND;MATEID=r_231_1;SVINSLEN=3;SVINSSEQ=TGA TR:VR 142:4 52:0 chr7 62275023 r_231_1 G [chr16:34800965[TCAG . Too_low_VAF SVTYPE=BND;MATEID=r_231_0;SVINSLEN=3;SVINSSEQ=TCA TR:VR 142:4 52:0 chr17 77263163 d_956 T . PASS END=77263237;SVTYPE=DEL;SVLEN=-74;SVINSLEN=5;SVINSSEQ=GTGCC TR:VR 40:16 21:0 chr18 2247693 d_1004 C . Too_small_size END=2247736;SVTYPE=DEL;SVLEN=-43 TR:VR 40:8 14:0 chr3 114087517 r_406 T . PASS END=114099431;SVTYPE=DUP;SVLEN=11914 TR:VR 114:8 23:0 chr4 49651359 i_1233 T . PASS END=49651359;SVTYPE=INS;SVINSLEN=330;SVINSSEQ=GGAATGGAATGGAATCAACACGAGTGGAAAGCACAGGAATGAAATGGAATGGAATGGATCGGAATGGAACGGAATGGAAATGGAGTGGAATGAAATCAACCCGAGTAGAATGGAACGGAATGCAATGGAATGGAATGGAATGGAATGGAATGGAGTGGAATAACATGCAATCAACATTGGTGGAATGGTATGGAAGGGAATGGAATGGAATGGAAAGGAACAAAAGGGCATGGAGTGGAACGGAATCAACCCGAATGGAATGGAACGGAATGGAGTGAAATGGTATGGAATGGAATGGAATGGAAAGGAATCAACCCGAAAGGAATGGAA TR:VR 190:24 56:1 chr8 138837239 d_2054 C . Too_small_size END=138837274;SVTYPE=DEL;SVLEN=-35 TR:VR 56:35 11:0 chr1 24928067 r_9_0 T T]chr2:96379981] . PASS SVTYPE=BND;MATEID=r_9_1 TR:VR 106:20 22:0 chr2 96379981 r_9_1 A A]chr1:24928067] . PASS SVTYPE=BND;MATEID=r_9_0 TR:VR 106:20 22:0 chr1 5897856 d_33 T . PASS END=5897906;SVTYPE=DEL;SVLEN=-50 TR:VR 37:14 17:0 chr10 75958610 i_178 T . Too_small_size END=75958610;SVTYPE=INS;SVINSLEN=36;SVINSSEQ=TTTAATAATTTTTTGGATAATTGATGTTTTATGGAT TR:VR 31:7 23:0 chr12 37989332 i_279 G . PASS END=37989332;SVTYPE=INS;SVINSLEN=347;SVINSSEQ=TGATGTATTTATTCATCTCACAGACTTAAACCTTTCTTTTTATGGATCAGTTTGGAAACACTGTTTTTGTAGAATCTGCAACTGGATATTTGGGAGTGCATTGAGGCCTGTGATGACACAGGAAGTATCTTCAGAGAAAAACTAGAAATAAGCTTTCTGAGAAACTGCTTTGTGACGTGTCCTTTTATTTCACAAAGCTAAAGCTTTCCTTTTGATAGAGCAGTTTCAAAACACTGTTTTTGTAGAATCTGCAAAGGGATATTTGGGAGCATACTGAGGTCTGTGGTCAAAAAGAGAAATAACTTCAGAGAGAAATTAGAAAGAGGCTTTCTGAGAAACTGCTTCAT TR:VR 48:3 8:0 chr12 82768930 d_441 C . Too_small_size END=82768965;SVTYPE=DEL;SVLEN=-35 TR:VR 45:15 13:0 chr18 23030107 r_257_0 C C]chr18:23041713] . PASS SVTYPE=BND;MATEID=r_257_1 TR:VR 49:10 16:0 chr18 23041713 r_257_1 A A]chr18:23030107] . PASS SVTYPE=BND;MATEID=r_257_0 TR:VR 49:10 16:0 chr19 17331932 i_679 T . Too_small_size END=17331932;SVTYPE=INS;SVINSLEN=44;SVINSSEQ=GAGATTTTTAATCATGTGTACACATTTCACCATTCAGAAAAGAT TR:VR 34:10 17:0 chr2 15729862 d_1095 A . Too_small_size END=15729900;SVTYPE=DEL;SVLEN=-38 TR:VR 47:16 19:0 chr2 59167374 r_300_0 C ]chr20:44378458]G . PASS SVTYPE=BND;MATEID=r_300_1 TR:VR 82:12 24:0 chr20 44378458 r_300_1 G G[chr2:59167374[ . PASS SVTYPE=BND;MATEID=r_300_0 TR:VR 82:12 24:0 chr3 114299116 r_407_0 C CTACAGAGCT]chrX:2723235] . PASS SVTYPE=BND;MATEID=r_407_1;SVINSLEN=9;SVINSSEQ=TACAGAGCT TR:VR 117:18 24:0 chrX 2723235 r_407_1 C CAGCTCTGTA]chr3:114299116] . PASS SVTYPE=BND;MATEID=r_407_0;SVINSLEN=9;SVINSSEQ=AGCTCTGTA TR:VR 117:18 24:0 chr3 167835168 d_1573 T . PASS END=167835311;SVTYPE=DEL;SVLEN=-143 TR:VR 67:40 21:0 chr8 43218330 r_523 T . Too_low_VAF END=43419320;SVTYPE=DUP;SVLEN=200990;SVINSLEN=8;SVINSSEQ=CCGGACGG TR:VR 97:3 27:0 chr9 123357968 d_2105 C . PASS END=123358036;SVTYPE=DEL;SVLEN=-68 TR:VR 36:23 8:0 chr9 89959550 r_551 A . PASS END=90506861;SVTYPE=DUP;SVLEN=547311 TR:VR 91:17 29:0 chr10 76215830 r_76 A . PASS END=76218239;SVTYPE=DUP;SVLEN=2409 TR:VR 39:6 14:0 chr12 109979770 d_447 T . Too_small_size END=109979810;SVTYPE=DEL;SVLEN=-40 TR:VR 35:16 18:0 chr12 38009796 r_124_0 A A]chr12:42895361] . PASS SVTYPE=BND;MATEID=r_124_1 TR:VR 87:21 24:0 chr12 42895361 r_124_1 C C]chr12:38009796] . PASS SVTYPE=BND;MATEID=r_124_0 TR:VR 87:21 24:0 chr12 84585000 r_135 T . PASS END=84634557;SVTYPE=DUP;SVLEN=49557 TR:VR 76:9 23:0 chr14 106183626 r_174_0 T ]chr9:113059720]TT . Too_low_VAF SVTYPE=BND;MATEID=r_174_1;SVINSLEN=1;SVINSSEQ=T TR:VR 102:3 38:1 chr9 113059720 r_174_1 T TA[chr14:106183626[ . Too_low_VAF SVTYPE=BND;MATEID=r_174_0;SVINSLEN=1;SVINSSEQ=A TR:VR 102:3 38:1 chr18 23033050 r_258_0 C [chr18:23072574[A . PASS SVTYPE=BND;MATEID=r_258_1 TR:VR 63:12 20:0 chr18 23072574 r_258_1 A [chr18:23033050[A . PASS SVTYPE=BND;MATEID=r_258_0 TR:VR 63:12 20:0 chr2 159332337 r_324 A . PASS END=159345480;SVTYPE=DUP;SVLEN=13143 TR:VR 73:6 21:0 chr2 59167612 r_301_0 G G[chr20:44375708[ . PASS SVTYPE=BND;MATEID=r_301_1 TR:VR 83:12 23:0 chr20 44375708 r_301_1 T ]chr2:59167612]T . PASS SVTYPE=BND;MATEID=r_301_0 TR:VR 83:12 23:0 chr2 91444781 r_308 C . Too_low_VAF END=91556778;SVTYPE=DUP;SVLEN=111997 TR:VR 376:15 119:0 chr3 90576328 i_1090 T . PASS END=90576328;SVTYPE=INS;SVINSLEN=339;SVINSSEQ=TTAATGCACACATCAAAAAGAAGTTTCTGAGAATTCTTCTGTCAAATTTATATGAAGAAATCCCGTTTCCAACGAAGGCCTCAAAAAGTCCCAAATATTCACTTACAGATTCTACAAAAAGAGTGTTTCAAAACTGCTCTATCAAGAGGAATGTTTAATAATTTGAATTGAATGAAAACATCTCAAAGTAGTTTCTGACGTTGCTTCTGTATATTTTTTATGTGAAGATATTCACTTTTCTACCGTAGGCCTCAAAGCGATCGGAATATAGACTTGCAAATTCCCAAAAAGAGTGTTTCAAAACTGCTCTATCAAAAGAAAGATTAAACACAGTAAACT TR:VR 59:3 15:0 chr5 68265964 r_465 T . PASS END=73523935;SVTYPE=DEL;SVLEN=-5257971;SVINSLEN=6;SVINSSEQ=TTTTTT TR:VR 74:19 24:0 chr7 84723374 d_1967 A . PASS END=84723465;SVTYPE=DEL;SVLEN=-91 TR:VR 36:13 17:0 chr9 124135930 r_560_0 C ]chrX:151227952]C . PASS SVTYPE=BND;MATEID=r_560_1 TR:VR 88:14 31:0 chrX 151227952 r_560_1 C C[chr9:124135930[ . PASS SVTYPE=BND;MATEID=r_560_0 TR:VR 88:14 31:0 chr9 90500009 d_2092 A . PASS END=90500268;SVTYPE=DEL;SVLEN=-259;SVINSLEN=1;SVINSSEQ=C TR:VR 55:9 13:0 chr1 67645383 d_61 G . PASS END=67645524;SVTYPE=DEL;SVLEN=-141 TR:VR 30:13 22:0 chr12 38009954 r_125_0 T [chr12:42895369[C . PASS SVTYPE=BND;MATEID=r_125_1 TR:VR 87:12 24:0 chr12 42895369 r_125_1 C [chr12:38009954[C . PASS SVTYPE=BND;MATEID=r_125_0 TR:VR 87:12 24:0 chr12 8683538 r_122 G . PASS END=8686506;SVTYPE=DUP;SVLEN=2968 TR:VR 80:6 10:0 chr18 24676720 r_259 C . PASS END=24693860;SVTYPE=DUP;SVLEN=17140 TR:VR 58:6 24:0 chr2 223373734 d_1284 G . PASS END=223374237;SVTYPE=DEL;SVLEN=-503;SVINSLEN=1;SVINSSEQ=T TR:VR 32:26 15:0 chr2 61952994 d_1108 A . PASS END=61953019;SVTYPE=INS;SVINSLEN=230;SVINSSEQ=TGCCTAGCTAGCCACCATGCCTAGCTAAGTTTTGTATTTTTAGTGGTGACGGGGTTTCACCTTGTGGGCCAGGCTGATCTCGAACTCCTGACCTCAGGTAATCTGCCAGCCTCGGCCTCCCAACGTGCTGCTGGGATTACAGGTGTGAGCCACCATACCCAGCCTAGTTTTTATATTTCTGAGAGTTTTAGGATTATTTATGTAAGTATTTCTTTTTCTTTTCTTTTTTT TR:VR 61:18 19:0 chr2 91468166 r_309_0 C C[chr22:10691586[ . Too_low_VAF SVTYPE=BND;MATEID=r_309_1 TR:VR 330:3 95:0 chr22 10691586 r_309_1 T ]chr2:91468166]T . Too_low_VAF SVTYPE=BND;MATEID=r_309_0 TR:VR 330:3 95:0 chr2 96367425 r_310_0 G [chr8:11847035[C . PASS SVTYPE=BND;MATEID=r_310_1 TR:VR 86:13 26:0 chr8 11847035 r_310_1 C [chr2:96367425[C . PASS SVTYPE=BND;MATEID=r_310_0 TR:VR 86:13 26:0 chr20 29515823 r_357 T . PASS END=29617246;SVTYPE=DUP;SVLEN=101423 TR:VR 139:22 55:0 chr3 115564098 d_1553 C . Too_small_size END=115564136;SVTYPE=DEL;SVLEN=-38 TR:VR 55:23 22:0 chr7 37179189 d_1932 T . Too_small_size END=37179226;SVTYPE=DEL;SVLEN=-37 TR:VR 26:8 8:0 chr7 87793984 r_504 G . PASS END=87908944;SVTYPE=DUP;SVLEN=114960;SVINSLEN=5;SVINSSEQ=TAATT TR:VR 83:15 53:0 chr9 124159645 r_561_0 C CCTCTCCCCACTCC[chrX:151228004[ . PASS SVTYPE=BND;MATEID=r_561_1;SVINSLEN=13;SVINSSEQ=CTCTCCCCACTCC TR:VR 79:24 34:0 chrX 151228004 r_561_1 A ]chr9:124159645]GGAGTGGGGAGAGA . PASS SVTYPE=BND;MATEID=r_561_0;SVINSLEN=13;SVINSSEQ=GGAGTGGGGAGAG TR:VR 79:24 34:0 chr9 96066271 d_2093 C . PASS END=96066336;SVTYPE=DEL;SVLEN=-65 TR:VR 15:12 15:0 chrY 11319631 d_2352 G . Too_low_VAF END=11320519;SVTYPE=DEL;SVLEN=-888;SVINSLEN=3;SVINSSEQ=TAA TR:VR 737:3 342:1 chr1 69876465 r_23 A . PASS END=69885234;SVTYPE=DUP;SVLEN=8769 TR:VR 59:7 25:0 chr10 133681476 r_87_0 C ]chrY:11313125]TCAAAGACAAGTGTCCCTCACTTGGGTGATCAGTGCAGAAATATGCCACAATGCCGCCAGTAGGCAGATATAGACAAGTGTTACATCACCTGCGTGATCACTGCAGGATGCACTGCAGGATCACTGCAGGATGCAA . Too_low_VAF SVTYPE=BND;MATEID=r_87_1;SVINSLEN=135;SVINSSEQ=TCAAAGACAAGTGTCCCTCACTTGGGTGATCAGTGCAGAAATATGCCACAATGCCGCCAGTAGGCAGATATAGACAAGTGTTACATCACCTGCGTGATCACTGCAGGATGCACTGCAGGATCACTGCAGGATGCA TR:VR 588:4 455:1 chrY 11313125 r_87_1 A ATGCATCCTGCAGTGATCCTGCAGTGCATCCTGCAGTGATCACGCAGGTGATGTAACACTTGTCTATATCTGCCTACTGGCGGCATTGTGGCATATTTCTGCACTGATCACCCAAGTGAGGGACACTTGTCTTTGA[chr10:133681476[ . Too_low_VAF SVTYPE=BND;MATEID=r_87_0;SVINSLEN=135;SVINSSEQ=TGCATCCTGCAGTGATCCTGCAGTGCATCCTGCAGTGATCACGCAGGTGATGTAACACTTGTCTATATCTGCCTACTGGCGGCATTGTGGCATATTTCTGCACTGATCACCCAAGTGAGGGACACTTGTCTTTGA TR:VR 588:4 455:1 chr12 88416433 d_442 T . PASS END=88416741;SVTYPE=DEL;SVLEN=-308 TR:VR 22:15 28:0 chr17 77484827 i_561 T . PASS END=77484827;SVTYPE=INS;SVINSLEN=719;SVINSSEQ=GATGGTAATGTGGGTGATGGTGATTGTGGTGGTAGTGGTGGTGATGGTGATGATTGTGATTGTGGTGAAGGGGGTGATGGTGGTGATTGTGATGGTGAAGGGGGTGATGGTGATTGTGATGGTGGTGAAGGGGGTGATGGTGGCGATTGTGGTGGTGAAGGGGGTGATGGTGGCGATTGTGGTGGTGAAGGGGGTGATGGTGGCGATTGTGGTGGTGAAGGGGGTGATGGTGATTGTGATGGTGGTGAAGGGGGTGATGGTGATTGTGATGGTGGGTGAAGGGGGTGATGGTGATTGTGATGGTGGTGATGGGGTGATGGTGGTGATGGCGATGGTGGTGATTGTGATGGTGGTGAAGGGGTGATGGTGGTGATTGTGATGGTGGTGATGGTGATGGTGGTGATTGTGGTGGTGGTGATGTGGGTGGTGGTGGTGATGTGGGTGGTGGTGGTGATTGTGATGGGGTGATGGTAATGTGGGTGATGGTGATTGTGGTGGTAGTGGTGGTGATGGTGATGATTGTGATTGTGGTGAAGGGGGTGATGGTGGTGATTGTGATGGTGAAGGGGGTGATGGTGATTGTGATGGTGGTGAAGGGGGTGATGGTGGCGATTGTGGTGGTGAAGGGGGTGATGGTGGCGATTGTGGTGGTGAAGGGGGTGATGGTGGCGATTGTGGTGGTGAAGGGGGTGATGGTGATTGTGATGGTGGTGAAGGGG TR:VR 45:17 14:0 chr18 2889133 r_254 C . PASS END=2918120;SVTYPE=DUP;SVLEN=28987;SVINSLEN=6;SVINSSEQ=ATTCTT TR:VR 72:6 25:0 chr19 21516376 r_271 C . Too_low_VAF END=21560072;SVTYPE=DEL;SVLEN=-43696;SVINSLEN=10;SVINSSEQ=GCACCTGGCC TR:VR 84:3 31:0 chr2 160169107 r_325 A . PASS END=160326141;SVTYPE=DUP;SVLEN=157034 TR:VR 100:17 30:0 chr2 223443294 r_341 A . PASS END=223484918;SVTYPE=DUP;SVLEN=41624;SVINSLEN=5;SVINSSEQ=TTAAT TR:VR 81:26 23:0 chr22 45208290 i_1034 G . PASS END=45208291;SVTYPE=INS;SVINSLEN=525;SVINSSEQ=CTTGAGCTGTTGTGAGGTAGACTGGGAATACCACGACTCCTGCAGGTAAGGTCAGTGGGGGCTCCTGGGCTCCACACACACGAGCGGTGAGAACAGGCAGAACCCGCCAAGCTCCACACACATGAGCTGTGAGAACAGGCAGAACCCAACTCCACACACACGAGCTGTGAGAACACAGGCAGAATCCGCCAACTCACACACGAGCTGTGAGAACAGGCAGAACCACCGACTCACACACATGAGCTGTGGAGAACAGGCAGAACCACCGACCCCACACGCAGGAGCTGTGAGAACAGGCAGAACTCACTGACTCCACACGCACGAGCTGTAAGAACAGGTAGAACCCGCCAACTCCACAGCCACACGAGCTGTGAGAACAGGCAGAACCCAACTCCACACGTGCAGGAGCTGTGAGAACAGGCAGAACCACCGACTCCACACGGCGCACGAGCTGTGAGAACAGGCAGAACCCAACTCCACACGCAGGAGCTGTGAGAACAGGCAGAACCACCGACTCCACACACA TR:VR 23:5 15:0 chr3 169770567 i_1118 C . Too_small_size END=169770567;SVTYPE=INS;SVINSLEN=44;SVINSSEQ=ATAAATATAAATATATAAAAAATTATATTTATATATCATAAATA TR:VR 83:10 19:0 chr3 91365198 d_1551 A . Too_small_size END=91365236;SVTYPE=DEL;SVLEN=-38 TR:VR 30:12 11:0 chr5 77201368 r_466 A . PASS END=150213878;SVTYPE=DEL;SVLEN=-73012510 TR:VR 51:15 21:0 chr7 37264509 d_1933 G . PASS END=37264565;SVTYPE=DEL;SVLEN=-56;SVINSLEN=1;SVINSSEQ=T TR:VR 48:18 22:0 chr9 97170173 d_2094 G . PASS END=97172462;SVTYPE=DEL;SVLEN=-2289 TR:VR 31:9 22:0 chr10 78519183 d_315 A . PASS END=78519247;SVTYPE=DEL;SVLEN=-64 TR:VR 31:18 12:0 chr11 48919865 i_202 G . PASS END=48919865;SVTYPE=INS;SVINSLEN=341;SVINSSEQ=TTCAACACAGTGAGTTGAATGCACACATCACAAAGAGTTTTCTGAGAATGCTTCTGTCTGGTTTTTATGTGAGGATATTCCCATTTCCAACAAAGGCCTCAAGGCATTCCAGTTGTCCACTTGCAGATTGTACAAAAAGAGTGTTTGAAACCGCTCTATGAAAACGTGTGTTCAAATATGTGAGTTGAATGCAATAATTCCAAAGAAGTTTCTGAGAATGCTTCTGTCTTGTTTTTATGTGAAGATATTTCATTTTGCACAACAGGCCTCAATAGGCTCGAAATATCCACTTGCAGATTCTACAAAAAGGGTGTTTGAAAACTGCTCTATCAACAGAAGTT TR:VR 45:5 15:0 chr12 4071871 r_118 T . PASS END=4082429;SVTYPE=DUP;SVLEN=10558 TR:VR 54:9 23:0 chr12 89029921 r_136 C . PASS END=89178541;SVTYPE=DUP;SVLEN=148620 TR:VR 71:12 20:0 chr14 93200388 d_516 T . PASS END=93200706;SVTYPE=DEL;SVLEN=-318 TR:VR 38:17 13:0 chr17 77639757 d_958 T . PASS END=77639960;SVTYPE=DEL;SVLEN=-203 TR:VR 39:13 10:0 chr18 29698568 d_1012 C . Too_small_size END=29698604;SVTYPE=DEL;SVLEN=-36 TR:VR 35:12 19:0 chr2 165798595 r_326 A . PASS END=165861133;SVTYPE=DUP;SVLEN=62538 TR:VR 88:10 27:0 chr2 223810883 d_1285 A . PASS END=223811231;SVTYPE=DEL;SVLEN=-348 TR:VR 40:34 12:0 chr2 61953087 d_1110 G . PASS END=61953149;SVTYPE=DEL;SVLEN=-62 TR:VR 61:12 19:0 chr2 91477371 d_1180 C . Too_low_VAF END=91477481;SVTYPE=INS;SVINSLEN=112;SVINSSEQ=GCCGCCTCGGGTTTATGCCCACCGCGGCTTTTTGCACCCCGCGGCCTTGCCAGCTTTTTGTCCACCGCGGCTTTTGCGCCCCCGCCGCCGCGGCTTTTTACATTGCCGCGGC TR:VR 151:4 46:1 chr5 10354799 d_1782 T . PASS END=10354906;SVTYPE=DEL;SVLEN=-107;SVINSLEN=7;SVINSSEQ=CTACATA TR:VR 22:10 12:0 chr5 82140612 d_1818 C . PASS END=82140585;SVTYPE=INS;SVINSLEN=327;SVINSSEQ=CTGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCTGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGTGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCTGGCCAGCCGCCCCATCCG TR:VR 26:3 9:0 chr6 396649 i_1348 G . PASS END=396649;SVTYPE=INS;SVINSLEN=109;SVINSSEQ=ATGCCAAAAGTGCAGCTTCTTATCTCAGCTCCTCCTGCACTCCTTTACCCCCGTCTCAATGCCAGTGCTTCCTATCTCAGCCTCTCCCACTCCTTTACCCCTGTCTCAA TR:VR 34:5 8:0 chr7 134581836 d_1982 C . PASS END=134586418;SVTYPE=DEL;SVLEN=-4582 TR:VR 33:14 13:0 chr9 127857357 i_1602 G . PASS END=127857358;SVTYPE=INS;SVINSLEN=221;SVINSSEQ=TGGGTGGGGGGTGAAGCGGAAGTCACCTCTGGCTCCCACAGCATCCTGACCTTCCCTGTCACACCTAAGCCTGTGTGCAGCCATCTGCATGTATCTCTCTACTTGATTAGACCCAATGGATTCTCTAGAAAGTAGGAGAGACTCCAGATGGACTCCAGGAAGAACTGGGGCCCCGACCCCAGACACCTCATGGAGGAAGGAAGAGATTGGGGACCACCGTG TR:VR 30:23 17:0 chrX 146411008 d_2313 G . PASS END=146411367;SVTYPE=DEL;SVLEN=-359 TR:VR 36:17 15:0 chr1 73132536 d_62 A . Too_small_size END=73132574;SVTYPE=DEL;SVLEN=-38 TR:VR 38:16 15:0 chr10 133687823 i_190 A . Too_low_VAF END=133687823;SVTYPE=INS;SVINSLEN=415;SVINSSEQ=TAATGCCCGCTGTAGGCAGAGCCTAGACAAATGTTGCATGACCTAGGTGATCAGTGCAGAGATACATCACAATAACCCCTGTAAGCAGAGCCTAGACAAGAGGTACATCACCTGGGTGATCAGTGCAAGTGACATGTCACAAAGCACCCTGTAGGCAGATCCTAGAAAAAAGCTACATCACCTAGGTGATCAGTGCAGAGATATGTCCCAATGTCCCTGTAGGCAGAGCCTAGACAAGAGTTACATCACCTGGGTGATCATTGCAGAGATATGTCACAATGCCCCTGTAGTCAGATCCTAGACAAGAGTTACATCGCCTGGGTGATCAGTGCAGTGATATGTCACAATGCCCTGTCGTAGAAGCCTAGACTACAAGTTACATCACCTGGGTGATCAGTGCACAGAGATATGTCCC TR:VR 327:8 132:0 chr10 80497426 r_77 C . PASS END=100498282;SVTYPE=DEL;SVLEN=-20000856 TR:VR 50:14 26:0 chr11 48920315 i_203 C . PASS END=48920316;SVTYPE=INS;SVINSLEN=1464;SVINSSEQ=CAAACATCCATTTGCAGATTCTACAAAAAGAGTGAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAATTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAAACTTAAATGTTAGACCTAAAACTATTAAAAACCCTAGAAGAAAATCTAGGCATTACCATTCAGGACATAGGCATGGGCAAGGACTTCATGTCTAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTATCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCACAACCTACTCATCTGACAAAGGACTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAACCCGATCAAAAAGTGGGTGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAAAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACAATGAGATACCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATGGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGAGACTCCTCAGGGATCTAGAACTGGAAATACCATTTGACCCAGCCATCCCATTACTGGGTACATACCCAAAGGACTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCATTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGGAAATGTGGCACATATACACCATGGCATACTAAGCAGCCATAAAAAATGATGAGTCCATGTCGTTTGTAGGGACATGGATGAAATTCGAAATCATCATTCTCAGTAATCTATCGCAAGAACAAAAAACCAAACACTGCATATTCTCACTCATAGGTGGGAACTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTTATGGGGTGGTGGGAGGGGGGAGGGATAGCATCGGGAGATATACCTAATGCTAGATGACGAGTTAGTAGGTGCAGCGCACCAGCATGGCACATGTATACATATATAACTAACCTGCACAAAGTGCACATGTACGCTAAAACTTAAAAGTATAATAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAGAATGCAACAACAACAAAAAAAGAGTGTCTCAAAACTGCTCTATCAAAAGGCAGGTTCAACTCCGTGAGTTGATTGAACACATAACAAAGAAGTTTCTGAGAATGCTTCTGTCTATTTTTTCTGTGAAGATATTCCCGTTTCAACCATAGGTCTCAAAGTGCTCCA TR:VR 46:4 16:0 chr12 110885760 r_141_0 G G[chr3:159750894[ . PASS SVTYPE=BND;MATEID=r_141_1 TR:VR 138:25 34:0 chr3 159750894 r_141_1 C ]chr12:110885760]C . PASS SVTYPE=BND;MATEID=r_141_0 TR:VR 138:25 34:0 chr12 89137446 r_137 A . PASS END=89201427;SVTYPE=DUP;SVLEN=63981 TR:VR 69:17 36:0 chr15 20105528 i_436 G . PASS END=20105528;SVTYPE=INS;SVINSLEN=771;SVINSSEQ=CTGGATGGCTGGCTGGCTTGGCTTGGCTGGCTGGTTGGCTTGGCTGGCTGGCTTGGCTGGCTTGGCTGGCTGGCTGGCTTGGCTGGCTGACTGGCTGGTTGGCTTCGCTGCCTTGACTGTTTGGGTGGCTTGGCCAGCTTGGCTGGCTGAGTGGCTTGGCTGGCTTTGCTGGCTGGGTGGCTTGGCTGGCTTGGTGGCTTGGCTGGCTTGCCTGGCTGGAGTGGCTTGGCTGGCTTGGCTGGCTGGCTGGCTTGGCTGGCTTGGCTGGCTTGCTGGCTTGGCTGGCTTGGTGGGCTTGGCTGGCTGGCTTGGGTGGCTTGGCTGGCTTGGCTGGCTGGCAGGCTTGGCTGGCTTGGCTGGGTTGGCTGGCTGGCTGTCTTGGCCGGCTTGGCTGGCTGGCTGGCATGGCTTGCTTGGCTGCCTGTGCTGGCTGGCTGGCTGGGCTGTCTCTGGCTGGTTGGCTGGCTTGTCTGGCTTGGCTGTCTGTGCTGGCTGGCTGGCTGGGCTGTCTGGCTGGTTGGCTGGCTTGGCTGGCTTGGCTGGCTTGACTGACCGGCTTGGCTGGCTTTGCTCTCTTGGCTGGCTTGGCTGGGTGGCTGGCTTTGCTGGGTGGCTGGCTGGCTGGCTGGTGGTCTGGTTTGGCTGGCTGGTTGGCTGGGCTGGCTGGGCTCGCTGGCTGGCTTGCCCGGCTTGGCTGGCTGGAGGCTGGCTGGGCTCGCTGGCTGGCTTGCCTGGCTTGGCTGGCTGGCTGGCTGGGCTGGCTTGGCTGCC TR:VR 106:9 40:1 chr18 30287850 d_1013 G . PASS END=30287951;SVTYPE=DEL;SVLEN=-101 TR:VR 38:22 26:0 chr2 168972520 r_327_0 T ]chr21:40119671]T . PASS SVTYPE=BND;MATEID=r_327_1 TR:VR 84:22 40:0 chr21 40119671 r_327_1 T T[chr2:168972520[ . PASS SVTYPE=BND;MATEID=r_327_0 TR:VR 84:22 40:0 chr2 22584633 d_1098 G . PASS END=22585220;SVTYPE=DEL;SVLEN=-587 TR:VR 24:9 14:0 chr2 62242121 d_1111 G . Too_small_size END=62242158;SVTYPE=DEL;SVLEN=-37 TR:VR 41:14 12:0 chr6 40398107 d_1858 G . PASS END=40398191;SVTYPE=DEL;SVLEN=-84 TR:VR 42:15 16:0 chr1 240205324 r_54 C . PASS END=240214534;SVTYPE=DEL;SVLEN=-9210 TR:VR 34:14 17:0 chr1 73530091 i_44 C . PASS END=73530091;SVTYPE=INS;SVINSLEN=78;SVINSSEQ=CACTTGCCGTAATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTATTCTC TR:VR 38:17 18:0 chr10 16306832 d_251 G . PASS END=16306901;SVTYPE=DEL;SVLEN=-69 TR:VR 29:15 13:0 chr15 20214357 d_751 C . PASS END=20214456;SVTYPE=DEL;SVLEN=-99 TR:VR 116:12 54:0 chr15 99927904 d_788 C . PASS END=99927955;SVTYPE=INS;SVINSLEN=53;SVINSSEQ=GAGTGAGGAGGGCGGGGTGCGCGAGTGAGGAGGGCGGGGAGTGCGCGAGTGAG TR:VR 71:6 14:0 chr17 78978104 d_960 A . PASS END=78978348;SVTYPE=DEL;SVLEN=-244 TR:VR 47:18 27:0 chr18 36232690 r_260 A . PASS END=36385394;SVTYPE=DUP;SVLEN=152704 TR:VR 102:24 29:0 chr2 169008871 r_328_0 T TGAT[chr21:40113681[ . PASS SVTYPE=BND;MATEID=r_328_1;SVINSLEN=3;SVINSSEQ=GAT TR:VR 91:12 44:0 chr21 40113681 r_328_1 A ]chr2:169008871]ATCA . PASS SVTYPE=BND;MATEID=r_328_0;SVINSLEN=3;SVINSSEQ=ATC TR:VR 91:12 44:0 chr22 10726683 i_1003 G . Too_low_VAF END=10726683;SVTYPE=INS;SVINSLEN=55;SVINSSEQ=TCCATTCCATTCCATTCTATCCCATTCCATTCCATTACAGTCCATTCTATTCCAT TR:VR 187:3 65:0 chr3 116109076 r_408 A . Too_low_VAF END=116811781;SVTYPE=DEL;SVLEN=-702705 TR:VR 116:3 19:0 chr3 173723644 i_1121 C . PASS END=173723674;SVTYPE=INS;SVINSLEN=69;SVINSSEQ=CTGTGTGCCATAGCTCATCCCAGACTCCTCCAATCCGGGTCTTGATTCAGGCCGGAGGCAGTCATCCCT TR:VR 79:54 12:0 chr5 2651035 r_455 C . PASS END=2709697;SVTYPE=DUP;SVLEN=58662 TR:VR 90:10 20:0 chr5 82622946 r_467 A . PASS END=82702519;SVTYPE=DUP;SVLEN=79573 TR:VR 69:19 35:0 chr6 424396 i_1349 C . PASS END=424396;SVTYPE=INS;SVINSLEN=115;SVINSSEQ=TCCCCGCCGGGCCAGCTCCTCGCCTCCCCGCCGACGGAGCCCCCGCCGGGCCTTCCCGCCTCCCCGCCGACGGAGCCCCCGCCGGGCCTTCCCCGCCCTCCCCCGCCGACGGAGC TR:VR 35:3 9:0 chr7 136668687 d_1983 T . PASS END=136668869;SVTYPE=DEL;SVLEN=-182 TR:VR 33:9 13:0 chrM 16109 r_563_0 A [chrM:16203[A . Too_low_VAF SVTYPE=BND;MATEID=r_563_1 TR:VR 748:4 219:0 chrM 16203 r_563_1 A [chrM:16109[A . Too_low_VAF SVTYPE=BND;MATEID=r_563_0 TR:VR 748:4 219:0 chrX 93058072 d_2294 T . PASS END=93058281;SVTYPE=DEL;SVLEN=-209 TR:VR 25:24 6:0 chr1 158499288 r_42_0 T T]chr6:36926489] . PASS SVTYPE=BND;MATEID=r_42_1 TR:VR 125:17 39:0 chr6 36926489 r_42_1 T T]chr1:158499288] . PASS SVTYPE=BND;MATEID=r_42_0 TR:VR 125:17 39:0 chr1 2664416 d_15 A . Too_low_VAF END=2664538;SVTYPE=DEL;SVLEN=-122;SVINSLEN=1;SVINSSEQ=T TR:VR 266:4 86:1 chr10 21471248 r_62 C . PASS END=21519471;SVTYPE=DUP;SVLEN=48223 TR:VR 80:11 26:0 chr11 101027730 r_103_0 A [chr8:50327560[T . Too_low_VAF SVTYPE=BND;MATEID=r_103_1 TR:VR 72:3 33:0 chr8 50327560 r_103_1 T [chr11:101027730[T . Too_low_VAF SVTYPE=BND;MATEID=r_103_0 TR:VR 72:3 33:0 chr12 111600698 d_448 A . PASS END=111611209;SVTYPE=DEL;SVLEN=-10511 TR:VR 27:15 17:0 chr15 20250654 d_752 A . PASS END=20254771;SVTYPE=DEL;SVLEN=-4117;SVINSLEN=5;SVINSSEQ=CAGCA TR:VR 125:14 48:0 chr2 98356909 r_311 A . PASS END=98446522;SVTYPE=DUP;SVLEN=89613 TR:VR 86:15 9:0 chr3 174857022 r_425 C . PASS END=174867042;SVTYPE=DUP;SVLEN=10020 TR:VR 105:7 25:0 chr5 2668288 r_456 A . PASS END=2681408;SVTYPE=DUP;SVLEN=13120 TR:VR 77:8 11:0 chr6 42858878 r_478 A . PASS END=43018041;SVTYPE=DUP;SVLEN=159163 TR:VR 110:21 32:0 chr7 137223088 r_510 A . PASS END=137224592;SVTYPE=DEL;SVLEN=-1504 TR:VR 45:17 18:0 chr7 41536125 d_1934 A . PASS END=41536383;SVTYPE=DEL;SVLEN=-258 TR:VR 38:16 11:0 chr1 159345846 r_43 C . PASS END=159374264;SVTYPE=DUP;SVLEN=28418;SVINSLEN=3;SVINSSEQ=TAG TR:VR 74:9 20:0 chr1 241155076 r_55 A . PASS END=241158806;SVTYPE=DUP;SVLEN=3730 TR:VR 38:5 22:0 chr11 101037974 r_104_0 T TACT]chr8:50327807] . PASS SVTYPE=BND;MATEID=r_104_1;SVINSLEN=3;SVINSSEQ=ACT TR:VR 71:5 34:0 chr8 50327807 r_104_1 C CAGT]chr11:101037974] . PASS SVTYPE=BND;MATEID=r_104_0;SVINSLEN=3;SVINSSEQ=AGT TR:VR 71:5 34:0 chr11 48922923 i_206 G . PASS END=48922924;SVTYPE=INS;SVINSLEN=173;SVINSSEQ=CTGTATGAAAAGGAAAGTTCAAATCTGTGAGTTGAATGCACACATCAAAAAGCAGTTTCTGTGAATGCTTCTGTCTAGTTTTTAGGTGAAGATATTCCCGTTTCCAACGAAAGCCTCAAAGCCGTCCAAATATCCACTTACATATTCTATAAAAAGAGTGTTTGAAAACTGCT TR:VR 48:5 17:0 chr12 114325955 d_449 C . Too_small_size END=114325992;SVTYPE=DEL;SVLEN=-37 TR:VR 25:18 12:0 chr14 96191126 d_518 T . PASS END=96192323;SVTYPE=DEL;SVLEN=-1197 TR:VR 38:27 15:0 chr15 20341802 d_753 C . Too_small_size;Too_low_VAF END=20341827;SVTYPE=DEL;SVLEN=-25;SVINSLEN=17;SVINSSEQ=AGCCAAGCCAGCCAAGC TR:VR 148:4 56:0 chr2 177172968 d_1246 A . PASS END=177173028;SVTYPE=DEL;SVLEN=-60 TR:VR 34:11 13:0 chr2 63545138 d_1112 G . PASS END=63547559;SVTYPE=DEL;SVLEN=-2421 TR:VR 60:16 13:0 chr2 90387976 d_1140 G . Too_low_VAF END=90387990;SVTYPE=INS;SVINSLEN=117;SVINSSEQ=GAATCATCATCAAATGGAATCGAATGGAATCATCGAACAGACTCGAATGGAATCATCGGAGAATGGAATCGAATGGAATCATCAAATGGACTCGAATGGAATAATCGAATGGAATGA TR:VR 563:3 255:1 chr2 99018461 d_1228 C . PASS END=99018514;SVTYPE=DEL;SVLEN=-53 TR:VR 27:13 13:0 chr20 30952569 d_1334 T . PASS END=30952674;SVTYPE=INS;SVINSLEN=106;SVINSSEQ=CTGTCTAGTTTTTATGTGAAGATATTTCCTTTTCCAACATAGGCCTCAAAGTGCTGCAAATACCCACTTGCAGATGCTTCAAAAAGACTGTTTCAAAACTGCTCAG TR:VR 45:17 17:0 chr20 8951072 r_349_0 A AAAG[chr3:44329846[ . PASS SVTYPE=BND;MATEID=r_349_1;SVINSLEN=3;SVINSSEQ=AAG TR:VR 84:12 14:0 chr3 44329846 r_349_1 G ]chr20:8951072]CTTG . PASS SVTYPE=BND;MATEID=r_349_0;SVINSLEN=3;SVINSSEQ=CTT TR:VR 84:12 14:0 chr21 46034963 i_994 C . PASS END=46034963;SVTYPE=INS;SVINSLEN=220;SVINSSEQ=CCCCGTCACCTGCGGTGTGGACGGGCCTCTCCAGTGTGTGCCAGCCTCCAATACCCCCATGTCTCCTGCGGTGTGGACGGGCCTCTCCAGTGTGTGTGCCAGCCTCCAATACCCCGTCACCTGCGGTGGACGGGCCTCTCCAGTGTGTGCCAGCCTCCAATACCCCCGCATCACCTGCGGTGTGGACGGGCCTCTCCAGGTGTGCCAGCCTCCAACACTC TR:VR 57:5 12:0 chr3 116832399 r_409 T . PASS END=117446554;SVTYPE=DEL;SVLEN=-614155;SVINSLEN=5;SVINSSEQ=ACAAA TR:VR 91:15 26:0 chr3 198104122 i_1189 C . PASS END=198104122;SVTYPE=INS;SVINSLEN=346;SVINSSEQ=AGTGGGAGGAGAGACGCGTGCAAATTTAGATTCTGCTGCAGGATGTGGACAGTGGGAGGGAGACGCGTGCAAATTTAGATTCCGCTGCAGGATGTGGACAGTGGGAGGGGAGACGCGTGCAACTTAGATTTCTGCTGCAGGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATTTAGATTCTGCTACAGGATGTGGACAGTGGGGGGGAGACGCATGCAAATTTAGATTCCTGCAGCGATGTGGACAGTGGGAGGGAGACGCGTGCAAATTTAGATTCTGCTACAGGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATTTAGATTCTGCTACAGGATGTGGAC TR:VR 95:5 11:0 chr4 20626521 d_1653 T . PASS END=20628547;SVTYPE=DEL;SVLEN=-2026 TR:VR 37:12 25:0 chr5 83791039 d_1819 A . PASS END=83791737;SVTYPE=DEL;SVLEN=-698 TR:VR 24:12 22:0 chr7 43548247 r_497 T . PASS END=43625583;SVTYPE=DUP;SVLEN=77336;SVINSLEN=11;SVINSSEQ=ACATGCATCTG TR:VR 99:12 32:0 chrX 155803823 i_1825 A . PASS END=155803823;SVTYPE=INS;SVINSLEN=167;SVINSSEQ=TGCCCCCCTTTCTTTTTTGTAAAACCGCCACAGCTCTCATTGCTTGTTCTTGATGGCAGCTTTCTCTTCGGAGGTGGCTTCCTCTTCAGAGGCGGCTTCCTCTTCAGAGGCAGCTTCCACATCTGCAGACTAAAAGGAGACAGCACAAGCATACAACCACCAGAACA TR:VR 69:5 10:0 chr1 162289209 i_66 T . Too_small_size END=162289209;SVTYPE=INS;SVINSLEN=46;SVINSSEQ=TCCTTCCTTTCCTTCCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCT TR:VR 42:3 10:0 chr1 24211852 i_33 T . PASS END=24211852;SVTYPE=INS;SVINSLEN=464;SVINSSEQ=AGAAGATAGGTAGGAAGGACAGACAGAGCGTATTGATGGAAGCAAGACAGAAAGATGAGTGAGTGAGAGATGGAGAGAAAGAGGGTGGATGGAGAAAGGGAGGGAGATGGAAGAGGGTGATAGAGGTGGTGATGGAGGTAGGAGGTGGTGATGGAGGTGGTGATGGAGGTGGTGAGGGTGATGGAGGTGGTGATAGAGGTGGTGATGGAGGTAGGTAGGGTGATGGAGGTGGTGATGGAGGTGGTGAGGGTGAGAGTGAGAGAGGTGGTGAGAGAGGTGGTGAGGGTGATGGAGGTAGGTAGATAGAGGTGGTGATGGAGATGGTGAGGGTGATGAAGGTGGTGACAGGAGGTGGTGTGAGTGATGGAGGTAGGTGATAGAGGTGGTGATGGAGGTGGTGAGGGATGATGGAGGCAGTGGAGGTGGTGAAGGAGGTGGTGAGGGTGATGAAGGTGGTGATGGAG TR:VR 37:4 13:0 chr1 2665467 d_16 A . Too_low_VAF END=2665493;SVTYPE=INS;SVINSLEN=271;SVINSSEQ=GCCTGGAACAGCACCCTGCACCCCCAGGTGAGCATCCGACAGCCTGGAGCAGCACCCACCACTCCCAGGCCAGCATCCGATAACCTGGAGCAGCACCCACAACACCCCAAGTGAGCATCTGATTGTCTGGAGCAGCACCCACAACCACAGGTGAGCATCGTAGAGTCTGGAGCAGCGCCCACAGCCCCACGCGAGCATCTGACAGCCCCGGAGCAGTGACCACACCTCCAGGTGAGCAGCCTGACAACAGGGAGCAGCACCCATAGCCCAT TR:VR 272:3 86:0 chr12 95563919 r_138 A . PASS END=95570804;SVTYPE=DEL;SVLEN=-6885 TR:VR 42:14 25:0 chr14 96820068 r_172 C . PASS END=96926585;SVTYPE=DUP;SVLEN=106517 TR:VR 81:11 45:0 chr16 46861 r_211 A . PASS END=633750;SVTYPE=DUP;SVLEN=586889 TR:VR 130:40 25:0 chr2 101398964 d_1229 G . PASS END=101399837;SVTYPE=DEL;SVLEN=-873 TR:VR 29:17 14:0 chr20 11078545 i_858 T . PASS END=11078545;SVTYPE=INS;SVINSLEN=50;SVINSSEQ=TTTTTTCCCCCAGAAATGGCTATCACAAAGTTCTCTGAATAATTGAAGAT TR:VR 43:24 14:0 chr20 9107942 r_350 A . PASS END=10199174;SVTYPE=DUP;SVLEN=1091232 TR:VR 88:15 29:0 chr3 116959731 r_410 G . PASS END=117115358;SVTYPE=DEL;SVLEN=-155627;SVINSLEN=1;SVINSSEQ=A TR:VR 67:12 28:0 chr3 176888529 r_426 C . PASS END=176946979;SVTYPE=DUP;SVLEN=58450 TR:VR 138:8 24:0 chr4 22888771 d_1654 G . Too_small_size END=22888813;SVTYPE=DEL;SVLEN=-42 TR:VR 39:3 10:0 chr6 46836212 r_479 T . PASS END=47479775;SVTYPE=DUP;SVLEN=643563 TR:VR 62:16 29:0 chr7 139002471 r_511 G . PASS END=139025039;SVTYPE=DUP;SVLEN=22568 TR:VR 66:14 23:0 chr7 4481945 r_492 A . PASS END=4487735;SVTYPE=DEL;SVLEN=-5790 TR:VR 33:20 22:0 chr1 162719546 r_44 C . PASS END=163309353;SVTYPE=DUP;SVLEN=589807;SVINSLEN=26;SVINSSEQ=TGTACCATAGAACTTATGCTGTTATG TR:VR 101:23 24:0 chr1 79838366 r_24 T . PASS END=80026630;SVTYPE=DUP;SVLEN=188264 TR:VR 92:17 37:0 chr11 102235448 d_383 T . PASS END=102236323;SVTYPE=DEL;SVLEN=-875 TR:VR 41:14 15:0 chr14_GL000009v2_random 165542 d_525 G . PASS END=165589;SVTYPE=DEL;SVLEN=-47 TR:VR 113:20 36:0 chr16 15047128 d_802 G . Too_small_size END=15047164;SVTYPE=DEL;SVLEN=-36 TR:VR 82:35 13:0 chr16 47630001 r_236 A . PASS END=47767526;SVTYPE=DUP;SVLEN=137525 TR:VR 114:13 34:0 chr19 21682958 r_275_0 A A[chr6:29821415[ . Too_low_VAF SVTYPE=BND;MATEID=r_275_1 TR:VR 100:4 36:0 chr6 29821415 r_275_1 A ]chr19:21682958]A . Too_low_VAF SVTYPE=BND;MATEID=r_275_0 TR:VR 100:4 36:0 chr2 101976901 r_312_0 G ]chr21:42904874]T . PASS SVTYPE=BND;MATEID=r_312_1 TR:VR 104:14 42:0 chr21 42904874 r_312_1 T T[chr2:101976901[ . PASS SVTYPE=BND;MATEID=r_312_0 TR:VR 104:14 42:0 chr2 65965651 d_1113 C . Too_small_size END=65965687;SVTYPE=DEL;SVLEN=-36 TR:VR 67:31 24:0 chr3 117033837 r_411 A . PASS END=117063453;SVTYPE=DEL;SVLEN=-29616 TR:VR 46:3 28:0 chr4 22890482 d_1655 C . Too_small_size END=22890519;SVTYPE=DEL;SVLEN=-37 TR:VR 39:3 10:0 chr7 140776144 d_1985 T . PASS END=140776212;SVTYPE=DEL;SVLEN=-68 TR:VR 38:11 15:0 chrY 56842797 d_2400 C . PASS END=56843141;SVTYPE=DEL;SVLEN=-344;SVINSLEN=3;SVINSSEQ=TCT TR:VR 238:22 71:0 chr1 165636734 d_199 T . PASS END=165636789;SVTYPE=DEL;SVLEN=-55 TR:VR 48:23 14:0 chr1 79839081 r_25_0 T [chr3:113111644[A . Too_low_VAF SVTYPE=BND;MATEID=r_25_1 TR:VR 129:4 41:0 chr3 113111644 r_25_1 A [chr1:79839081[A . Too_low_VAF SVTYPE=BND;MATEID=r_25_0 TR:VR 129:4 41:0 chr10 41907545 d_279 T . Too_low_VAF END=41908533;SVTYPE=DEL;SVLEN=-988 TR:VR 638:3 215:1 chr11 102502085 r_105 T . PASS END=102683188;SVTYPE=DUP;SVLEN=181103 TR:VR 97:23 23:0 chr11 50145143 r_91 T . PASS END=50197064;SVTYPE=DUP;SVLEN=51921 TR:VR 85:9 34:0 chr12 121690737 r_143 A . PASS END=121701667;SVTYPE=DUP;SVLEN=10930 TR:VR 42:7 11:0 chr12 98561275 r_139 G . PASS END=98581366;SVTYPE=DEL;SVLEN=-20091 TR:VR 44:8 30:0 chr14_GL000225v1_random 80598 i_386 C . Too_small_size;Too_low_VAF END=80609;SVTYPE=INS;SVINSLEN=11;SVINSSEQ=GTGGTCTGGAC TR:VR 756:3 435:0 chr17 16162684 r_242_0 A [chr20:25756130[AATATTTAAGTG . Too_low_VAF SVTYPE=BND;MATEID=r_242_1;SVINSLEN=11;SVINSSEQ=AATATTTAAGT TR:VR 135:3 71:0 chr20 25756130 r_242_1 G [chr17:16162684[ACTTAAATATTG . Too_low_VAF SVTYPE=BND;MATEID=r_242_0;SVINSLEN=11;SVINSSEQ=ACTTAAATATT TR:VR 135:3 71:0 chr19 21697450 r_276_0 T [chr8:14487425[GT . PASS SVTYPE=BND;MATEID=r_276_1;SVINSLEN=1;SVINSSEQ=G TR:VR 96:6 43:0 chr8 14487425 r_276_1 T [chr19:21697450[CT . PASS SVTYPE=BND;MATEID=r_276_0;SVINSLEN=1;SVINSSEQ=C TR:VR 96:6 43:0 chr2 102002395 d_1230 T . PASS END=102002441;SVTYPE=INS;SVINSLEN=171;SVINSSEQ=AGGTCTAGGTCTGTGTCTAAGTCTATGTCTAGGTCTATGTCTATGTCTATGCCTATGCCTATGTCTATGTCTATGTCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTATGTTTATATCTATATCTATGTCTATATCTGTATCTATATCTATG TR:VR 50:14 17:0 chr2 179565325 d_1247 C . Too_small_size END=179565364;SVTYPE=DEL;SVLEN=-39 TR:VR 57:29 9:0 chr3 118966930 r_412 C . PASS END=118969693;SVTYPE=DUP;SVLEN=2763 TR:VR 54:4 21:0 chr3 198104492 i_1192 G . Too_low_VAF END=198104492;SVTYPE=INS;SVINSLEN=754;SVINSSEQ=CAAATTTAGATTCTGCTACAGGATGTGGACAGTGGGAGGAGACGCATGCAAATTTAGATTCTGCTACAGGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATTTAGATTCTGCTACAGGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATTTAGATTCTGCTACAGGATGTGGACAGTGGGGAGGAGACGCATGCAAATTTAGATTCTGGGCTACAGGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATTTAGGTTCTGCTACGCGATGTGGACAGTGGGAGGGGAGACGCATGCAAATTTAGATTCCGCTGCAGGATGTGGACAGTGGGAGGGGGAGACGCGTGCAAATTTAGATTCTGCTGCAGGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATTTAGATTCTGCTACAGGATGTGGACAGTGGGAGGGGAGACGCATGCAAATTTGGGATTCTGCTACAGGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATTTAGATTCTGCTACAGGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATTTAGATTCTGCTACAGGATGTGGACAGTGGGAGGGGAGACGCGTGCAAATTTAGATTCTGCTGCAGGATGTGATGACAGTGGGAGGGGAGACGCATGCGGTGGGTTAGATTCTGCTACAGGATGTGGACAGTGGGAGGGGAGACGTGCAAATTTAGATTCTGCTACAGGATGTGGACAGTGGGAGGGGAGACGCGTGC TR:VR 94:3 11:0 chr4 123529834 r_446 A . PASS END=123541032;SVTYPE=DEL;SVLEN=-11198 TR:VR 22:16 18:0 chr4 24127468 r_434 G . PASS END=24134485;SVTYPE=DUP;SVLEN=7017 TR:VR 45:3 13:0 chr5 31606622 r_459 C . PASS END=31631332;SVTYPE=DUP;SVLEN=24710;SVINSLEN=3;SVINSSEQ=CAA TR:VR 71:10 24:0 chr6 48840597 r_480_0 A ]chrUn_KI270749v1:17563]T . PASS SVTYPE=BND;MATEID=r_480_1 TR:VR 104:13 37:0 chrUn_KI270749v1 17563 r_480_1 T T[chr6:48840597[ . PASS SVTYPE=BND;MATEID=r_480_0 TR:VR 104:13 37:0 chr7 141449181 d_1986 G . PASS END=141449982;SVTYPE=DEL;SVLEN=-801 TR:VR 35:10 12:0 chrY 11327068 d_2359 A . Too_low_VAF END=11327420;SVTYPE=DEL;SVLEN=-352;SVINSLEN=147;SVINSSEQ=TGTCCCTCTAGGCAGAGCCTAGACAGAGTCTCATCTCCTGGGTGATCAATGCAGAGTTAGTGTCACAATGCCCCCATAAGCAGAGCCTAGACAAGAGTTACGTCACCTGGGTGATCTTCAGTGCAGAGATAATTCACTATGCCCCCA TR:VR 628:4 200:0 chrY 56842851 d_2401 C . PASS END=56843191;SVTYPE=DEL;SVLEN=-340;SVINSLEN=1;SVINSSEQ=T TR:VR 236:12 69:0 chr1 165888151 d_200 T . PASS END=165889193;SVTYPE=DEL;SVLEN=-1042 TR:VR 45:21 10:0 chr1 2441134 r_0_0 A [chr15:95858551[C . Too_low_VAF SVTYPE=BND;MATEID=r_0_1 TR:VR 95:3 21:0 chr15 95858551 r_0_1 C [chr1:2441134[C . Too_low_VAF SVTYPE=BND;MATEID=r_0_0 TR:VR 95:3 21:0 chr1 79839197 r_26_0 C C[chrX:2722837[ . PASS SVTYPE=BND;MATEID=r_26_1 TR:VR 129:17 32:0 chrX 2722837 r_26_1 A ]chr1:79839197]A . PASS SVTYPE=BND;MATEID=r_26_0 TR:VR 129:17 32:0 chr11 102886900 r_106 A . PASS END=102893010;SVTYPE=DUP;SVLEN=6110 TR:VR 40:8 16:0 chr12 121748255 i_289 G . PASS END=121748319;SVTYPE=INS;SVINSLEN=912;SVINSSEQ=TAGAAGGTGGGAGGCTGGGGTAGAAGGTGGGAGGCTGGGGTAGAAGGCGGGAGGCTGGGGTAGAAGGCGGGAGGCACTGGGGTAGAAGGCGGGAGGCTGGGGTAGAAGGCTGGGGAGGCTGGGGTAGAAGGCGGGAGGCACTGGGGTAGAAGGCGGGAGGCTGGGGTAGAAGGCGGAGGCTGGGGTAGAAGGTGGGAGGCACTGGGGTAGAAGGCGGGAGGCTGGGGTAGAAGGCGGGAGGCACTGGGGTAGAAGGCGGGAGGCTGGGGTAGAAGGCGGGAGGCTGGGGTAGAAGGCGGGAGGCTGGGGGTAGAAGGTGGGAGGCTGGGGTAGAAGGCGGGAGGCTGGGGTAGAAGGCGGGAGGCACTGGGGTGGAGGCGGGAAGGCGGAGGCTGGGGTAGGAAGGTGGAGGCTGGGGTAGAAGGCGGGAGGCTGGGGTAGAAGGCGGGAGGCTGGGGTAGAAGGTGGGAGGCTGGGGTAGAAGGCGGAGGCTGGGGTAGAAGGCGGGAGGCTGGGGTAGAAGGCGGAGGCTGGGGTAGAAGGCGGGAGGCACTGGGGTAGAAGGCGGGAGGCTGGGGTAGAAGGTGGGAGGCACTGGGGTAGAAGGCAGGGAGGCTGGGGTAGAAGGCGGGAGGCAGGGGGTAGAAGGTGGGAGGCACTGGGGTAGAAGGCGGGAGGCTGGGGTAGAAGGCGGGAGGCTGGGGTAGAAGGGGTGGGAGGCTGGGGTAGAAGGTGGGAGGCACTGGGGTAGCAAGGCACTGGAGGCACTGGGGGTAGAGGGCGTGGAGGCACTGGGGTGAAGGCGGGAGGCTGGGGTAGAAGGCGGGAGGCACTGGGGTAGAAGGCGGGGGGGCTGGGGTAGATAGCGAGGCTGGGGTAGAGTGGAGGCTGGGGTAGAAGGCTGGGAGGCAC TR:VR 32:9 15:0 chr13 100235224 r_155_0 G GAAAAA]chr8:85913813] . PASS SVTYPE=BND;MATEID=r_155_1;SVINSLEN=5;SVINSSEQ=AAAAA TR:VR 92:15 36:0 chr8 85913813 r_155_1 G GTTTTT]chr13:100235224] . PASS SVTYPE=BND;MATEID=r_155_0;SVINSLEN=5;SVINSSEQ=TTTTT TR:VR 92:15 36:0 chr15 22223551 r_194 T . PASS END=22224586;SVTYPE=DUP;SVLEN=1035;SVINSLEN=93;SVINSSEQ=CCCTCATTCCATCTCTATGAACAGGGCAGACGGAACCCAGGAGCCCAGGAGATTGACGGCTACACACACACACACACACACACACACACACAC TR:VR 56:11 9:0 chr19 21697956 r_277_0 A AC]chr3:77788795] . Too_low_VAF SVTYPE=BND;MATEID=r_277_1;SVINSLEN=1;SVINSSEQ=C TR:VR 106:5 36:1 chr3 77788795 r_277_1 T TG]chr19:21697956] . Too_low_VAF SVTYPE=BND;MATEID=r_277_0;SVINSLEN=1;SVINSSEQ=G TR:VR 106:5 36:1 chr2 179844791 d_1248 C . Too_small_size END=179844826;SVTYPE=DEL;SVLEN=-35 TR:VR 46:12 16:0 chr2 231383221 d_1292 A . PASS END=231383617;SVTYPE=DEL;SVLEN=-396 TR:VR 31:13 11:0 chr2 68450150 i_735 T . PASS END=68450150;SVTYPE=INS;SVINSLEN=302;SVINSSEQ=GTAATTTATATATAAATATATATATATTTATATATAAATATATATATATTTATATATATAAATATATATATTTATACATATAAATATATATAAATATATATATATTTATACATATAAATATATATAAATATATATTTATATGTAAAAATATATAAGTATATAAATATATATATAAATATATATAAATGTATTAATAGATATAATTTATATATAAATATAAATAGATATAATTTATATATAAATATATATAATTTATATATAAATATATAATTTATATATTTATATATAAGTATATATATAAA TR:VR 75:4 34:1 chr3 119313626 r_413 T . PASS END=119321909;SVTYPE=DUP;SVLEN=8283 TR:VR 76:9 19:0 chr4 27000547 d_1656 C . PASS END=27001441;SVTYPE=DEL;SVLEN=-894 TR:VR 35:12 20:0 chr9 135547368 d_2106 G . PASS END=135547439;SVTYPE=DEL;SVLEN=-71;SVINSLEN=1;SVINSSEQ=G TR:VR 23:17 28:0 chr1 176651817 r_45 T . PASS END=176938327;SVTYPE=DUP;SVLEN=286510 TR:VR 81:12 26:0 chr1 2441309 r_1_0 C C[chr12:14326448[ . PASS SVTYPE=BND;MATEID=r_1_1 TR:VR 83:12 23:0 chr12 14326448 r_1_1 A ]chr1:2441309]A . PASS SVTYPE=BND;MATEID=r_1_0 TR:VR 83:12 23:0 chr11 50756083 i_208 T . PASS END=50756086;SVTYPE=INS;SVINSLEN=174;SVINSSEQ=CCTTTTCCACAACAGACCTCAAAGCACTCCAAATGTCAACTTAAGATTCTACAAAAATAGTGTTTCCAAATTGCTCAATCAAAAGAGAAGTTCAACCCTGTGACATGAATGCACACTTAACAATGAAGTTTCTCAGAATACTTCTGAGTATTTTTTATGGGATGATATCTCCAT TR:VR 37:3 14:0 chr13 102739890 r_156 A . PASS END=102832843;SVTYPE=DUP;SVLEN=92953 TR:VR 65:14 26:0 chr16 16867401 d_804 C . PASS END=16871267;SVTYPE=DEL;SVLEN=-3866 TR:VR 73:13 14:0 chr2 102042888 r_313_0 A [chr21:42978880[G . PASS SVTYPE=BND;MATEID=r_313_1 TR:VR 124:18 25:0 chr21 42978880 r_313_1 G [chr2:102042888[G . PASS SVTYPE=BND;MATEID=r_313_0 TR:VR 124:18 25:0 chr2 72162511 d_1114 A . Too_small_size END=72162551;SVTYPE=DEL;SVLEN=-40 TR:VR 60:17 12:0 chr20 1162321 r_344_0 T [chr9:96973860[T . PASS SVTYPE=BND;MATEID=r_344_1 TR:VR 120:19 30:0 chr9 96973860 r_344_1 T [chr20:1162321[T . PASS SVTYPE=BND;MATEID=r_344_0 TR:VR 120:19 30:0 chr21 5021565 d_1372 T . PASS END=5022098;SVTYPE=DEL;SVLEN=-533 TR:VR 10:5 1:0 chr22_KI270733v1_random 151440 d_1498 T . Too_low_VAF END=169496;SVTYPE=DEL;SVLEN=-18056 TR:VR 747:3 248:0 chr4 125543565 d_1733 G . PASS END=125543680;SVTYPE=DEL;SVLEN=-115 TR:VR 21:15 13:0 chr5 115480708 r_468 T . PASS END=115518743;SVTYPE=DUP;SVLEN=38035 TR:VR 45:10 24:0 chr6 170169440 d_1896 A . PASS END=170170308;SVTYPE=DEL;SVLEN=-868;SVINSLEN=11;SVINSSEQ=CTGCCTGTTTG TR:VR 41:4 16:0 chr6 50391230 r_481 A . PASS END=57316496;SVTYPE=DEL;SVLEN=-6925266 TR:VR 68:24 19:0 chr7 97324545 r_505 A . PASS END=97333788;SVTYPE=DUP;SVLEN=9243 TR:VR 47:6 17:0 chrX 98848173 i_1810 A . PASS END=98848173;SVTYPE=INS;SVINSLEN=283;SVINSSEQ=TATATACTACATGTATATTTACATATATAAACATAAATATATACTACGTATATTTACATATATAAATATAAATATATACTACGTATATTTACATATATAAATATAAATATATACTAAGTATATTTACATATATAAATATAAATATATACTACGTATATTTACATATATAAATATAAGTATATACTACGTATATTTACATATATAAATATAAATATATACTACGTATATTTACATATATAAATATAAATATATACTACGTATATTTACATATATAAATATAAGT TR:VR 46:7 13:0 chrY 56843078 i_1882 G . Too_low_VAF END=56843078;SVTYPE=INS;SVINSLEN=70;SVINSSEQ=GGATCTGCTTACAGGGGGCATTGTGACATATCTCTGCCCTGATCACCCAGGTGATGTTACTCTTGTCTAG TR:VR 231:4 68:0 chr11 104442040 d_385 G . PASS END=104444827;SVTYPE=DEL;SVLEN=-2787 TR:VR 41:11 16:0 chr12 122440549 d_451 T . PASS END=122440760;SVTYPE=DEL;SVLEN=-211 TR:VR 21:13 15:0 chr16 16971039 r_218_0 C [chr2:28633900[T . PASS SVTYPE=BND;MATEID=r_218_1 TR:VR 98:18 37:0 chr2 28633900 r_218_1 T [chr16:16971039[T . PASS SVTYPE=BND;MATEID=r_218_0 TR:VR 98:18 37:0 chr2 102068684 r_314_0 T TGGT[chr21:42904876[ . PASS SVTYPE=BND;MATEID=r_314_1;SVINSLEN=3;SVINSSEQ=GGT TR:VR 97:28 33:0 chr21 42904876 r_314_1 T ]chr2:102068684]ACCT . PASS SVTYPE=BND;MATEID=r_314_0;SVINSLEN=3;SVINSSEQ=ACC TR:VR 97:28 33:0 chr20 1169535 r_345_0 G G]chr9:97006838] . PASS SVTYPE=BND;MATEID=r_345_1 TR:VR 140:15 26:0 chr9 97006838 r_345_1 G G]chr20:1169535] . PASS SVTYPE=BND;MATEID=r_345_0 TR:VR 140:15 26:0 chr22_KI270734v1_random 118710 d_1499 T . Too_small_size;Too_low_VAF END=118726;SVTYPE=DEL;SVLEN=-16;SVINSLEN=1;SVINSSEQ=G TR:VR 450:3 253:0 chr3 119463587 r_414 C . PASS END=119477255;SVTYPE=DUP;SVLEN=13668 TR:VR 82:18 23:0 chr3 178758521 d_1576 G . Too_small_size END=178758531;SVTYPE=DEL;SVLEN=-10 TR:VR 76:13 16:0 chr4 55168673 d_1704 T . PASS END=55171260;SVTYPE=DEL;SVLEN=-2587 TR:VR 33:10 14:0 chr8 100109454 r_530 T . PASS END=100184348;SVTYPE=DUP;SVLEN=74894 TR:VR 125:20 25:0 chr1 2445668 r_3_0 A A]chr1:40302154] . PASS SVTYPE=BND;MATEID=r_3_1 TR:VR 81:22 26:0 chr1 40302154 r_3_1 T T]chr1:2445668] . PASS SVTYPE=BND;MATEID=r_3_0 TR:VR 81:22 26:0 chr1 83961655 d_63 A . PASS END=83962522;SVTYPE=DEL;SVLEN=-867 TR:VR 33:8 15:0 chr11 107641275 d_386 G . PASS END=107641335;SVTYPE=DEL;SVLEN=-60;SVINSLEN=6;SVINSSEQ=GTAGAA TR:VR 43:18 13:0 chr12 12492392 r_123_0 G G[chr21:8214021[ . Too_low_VAF SVTYPE=BND;MATEID=r_123_1 TR:VR 540:5 499:0 chr21 8214021 r_123_1 G ]chr12:12492392]G . Too_low_VAF SVTYPE=BND;MATEID=r_123_0 TR:VR 540:5 499:0 chr16 17071772 i_496 C . PASS END=17071773;SVTYPE=INS;SVINSLEN=393;SVINSSEQ=CTCCCCTCTCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCCCTCCCCTCCCCTCTCCCCTCCCCCTCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCTCCTCCCGTCCCCTCCCCTCCCCTCTCCTCCCATCCCCTCTCCTCCCCTCCCCCCTCCCCTCCCCTTTCCTCCCATCCCCTCCCCTCACCCTCCCCTCCCCTCCCCTCCCCTCCCTGGTCCTCCCCTCCCCTCCCCTCCCCTCCCCCCTCCCCTCCCCCTCCCCTCCCCCTCCTCCCCTCCCCTCCCCTCCCCCCCCCCCTCCTCCCCTCCCCTCCCCTCCCCTCCCT TR:VR 102:11 15:0 chr19 2288898 r_264_0 G [chr2:31461277[A . PASS SVTYPE=BND;MATEID=r_264_1 TR:VR 96:18 30:0 chr2 31461277 r_264_1 A [chr19:2288898[A . PASS SVTYPE=BND;MATEID=r_264_0 TR:VR 96:18 30:0 chr2 104515312 d_1232 T . PASS END=104515359;SVTYPE=DEL;SVLEN=-47 TR:VR 29:13 6:0 chr20 11913494 d_1310 T . PASS END=11913550;SVTYPE=DEL;SVLEN=-56 TR:VR 42:15 12:0 chr3 120166969 d_1554 C . PASS END=120167080;SVTYPE=DEL;SVLEN=-111 TR:VR 54:17 15:0 chr3 178758541 d_1577 T . Too_small_size END=178758531;SVTYPE=INS;SVINSLEN=11;SVINSSEQ=ATCCAAGGAGG TR:VR 76:7 16:0 chr4 55210151 d_1705 C . PASS END=55211206;SVTYPE=DEL;SVLEN=-1055 TR:VR 53:17 19:0 chr7 147997715 r_512 A . PASS END=148035722;SVTYPE=DUP;SVLEN=38007 TR:VR 91:13 30:0 chr8 52998109 r_524 T . PASS END=53054314;SVTYPE=DUP;SVLEN=56205 TR:VR 94:18 30:0 chr1 180634 d_0 A . Too_small_size END=180659;SVTYPE=DEL;SVLEN=-25 TR:VR 88:6 29:0 chr10 27486966 r_65_0 A AAAAAAAAAGT]chr12:11139784] . PASS SVTYPE=BND;MATEID=r_65_1;SVINSLEN=10;SVINSSEQ=AAAAAAAAGT TR:VR 97:7 31:0 chr12 11139784 r_65_1 G GACTTTTTTTT]chr10:27486966] . PASS SVTYPE=BND;MATEID=r_65_0;SVINSLEN=10;SVINSSEQ=ACTTTTTTTT TR:VR 97:7 31:0 chr16 18337094 d_805 C . PASS END=18337144;SVTYPE=DEL;SVLEN=-50 TR:VR 156:10 39:0 chr19 2289220 r_265_0 C CACTGTGAGCTGTCCTTGTATCAGGTGTGAGCTGAGTGTGTCCTGCGTATGAGCTGTGTGTCCCGGGTGTGAGCTCTGTG[chr2:236407164[ . PASS SVTYPE=BND;MATEID=r_265_1;SVINSLEN=79;SVINSSEQ=ACTGTGAGCTGTCCTTGTATCAGGTGTGAGCTGAGTGTGTCCTGCGTATGAGCTGTGTGTCCCGGGTGTGAGCTCTGTG TR:VR 83:17 21:0 chr2 236407164 r_265_1 T ]chr19:2289220]CACAGAGCTCACACCCGGGACACACAGCTCATACGCAGGACACACTCAGCTCACACCTGATACAAGGACAGCTCACAGTT . PASS SVTYPE=BND;MATEID=r_265_0;SVINSLEN=79;SVINSSEQ=CACAGAGCTCACACCCGGGACACACAGCTCATACGCAGGACACACTCAGCTCACACCTGATACAAGGACAGCTCACAGT TR:VR 83:17 21:0 chr2 105054583 i_816 C . PASS END=105054583;SVTYPE=INS;SVINSLEN=109;SVINSSEQ=TTTTGGTATTGCATTTTATTAAATATAGCGGGCCCTTTTTTGGTATCGCATTTTATTAAATATAGCGGGCCCCTTTTGGTATCGCATTTTATTAAATATAGGGCCCCTT TR:VR 38:4 13:0 chr2 232946892 d_1294 T . PASS END=232946999;SVTYPE=DEL;SVLEN=-107 TR:VR 50:20 17:0 chr21 10797973 i_961 A . Too_low_VAF END=10797973;SVTYPE=INS;SVINSLEN=340;SVINSSEQ=GTTGAACCATTCCTTTGACTCAGTGGTTTGGAAACAGTCTTTTTTAGGATCTGCAAAGGGATATTTTTGAGCATTTTAAGGCCTATGGTGAAAAAGGAAACACTTTGACATAAAAACAAGATAGAAGCTTTCTGAGAATCATCTTTTTGATATTTGCATTTATCCCACAGAGGTGAACCTTTCTTTTGGTGAGCATTTTGGAAGCAGTTTTTGGTAGAATCTCCAAAGGGTTATTAGTTAGTGTTTTGTGTCCTAAGTTGGAAAATGAATTTTTTTACATAAAAACTAGACAGAATAATTCTGAGAAACTGCCTTGTGATGTGTGCTTTCATCTCACAGA TR:VR 224:8 93:1 chr4 31378978 i_1219 A . PASS END=31378978;SVTYPE=INS;SVINSLEN=107;SVINSSEQ=AGCATTATTAATAAGAGGGAACCAGGATCTCAAGGGCTCAGGGCCCTGGATGCAGAAGCCAAGAGGTGGGGAATGGCATAACAGATTGGTGCTGTGAATTAGAAGCA TR:VR 39:15 16:0 chr7 150088638 r_513 A . PASS END=150273407;SVTYPE=DUP;SVLEN=184769 TR:VR 90:16 26:0 chr7 49749336 d_1936 A . PASS END=49749492;SVTYPE=DEL;SVLEN=-156 TR:VR 40:15 14:0 chr10 27486966 r_66_0 A AAA]chr12:11038790] . Too_low_VAF SVTYPE=BND;MATEID=r_66_1;SVINSLEN=2;SVINSSEQ=AA TR:VR 123:3 38:1 chr12 11038790 r_66_1 T TTT]chr10:27486966] . Too_low_VAF SVTYPE=BND;MATEID=r_66_0;SVINSLEN=2;SVINSSEQ=TT TR:VR 123:3 38:1 chr11 110602080 r_107 A . PASS END=128653877;SVTYPE=DEL;SVLEN=-18051797 TR:VR 58:14 30:0 chr16 58178627 r_238 A . PASS END=58283888;SVTYPE=DUP;SVLEN=105261;SVINSLEN=1;SVINSSEQ=T TR:VR 79:10 33:0 chr17 19951099 r_243_0 G ]chr6:31329621]GGGTCAGCCCCCGCCCGGCCAGCCACTCCGTCAGGGAGGGAGGTGGGGGGTCAG . PASS SVTYPE=BND;MATEID=r_243_1;SVINSLEN=53;SVINSSEQ=GGGTCAGCCCCCGCCCGGCCAGCCACTCCGTCAGGGAGGGAGGTGGGGGGTCA TR:VR 59:3 27:0 chr6 31329621 r_243_1 G GTGACCCCCCACCTCCCTCCCTGACGGAGTGGCTGGCCGGGCGGGGGCTGACCC[chr17:19951099[ . PASS SVTYPE=BND;MATEID=r_243_0;SVINSLEN=53;SVINSSEQ=TGACCCCCCACCTCCCTCCCTGACGGAGTGGCTGGCCGGGCGGGGGCTGACCC TR:VR 59:3 27:0 chr2 180514554 d_1253 A . PASS END=180517037;SVTYPE=DEL;SVLEN=-2483;SVINSLEN=138;SVINSSEQ=ATAATAAACTTGGGGCCGGGCGCGGTGGCTCACGCTTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAAAA TR:VR 46:18 16:0 chr2 76081094 r_303 A . PASS END=76123252;SVTYPE=DEL;SVLEN=-42158 TR:VR 80:17 35:0 chr4 132891500 d_1734 A . PASS END=132891553;SVTYPE=DEL;SVLEN=-53 TR:VR 32:23 17:0 chr4 31378917 i_1220 C . PASS END=31378917;SVTYPE=INS;SVINSLEN=101;SVINSSEQ=GAGGCCCCCGATGCAGAAGCCAAGAGGTGGGGAATGATTAAAGTTGTGTGCTGTGAATTAGAAGCATTATTAATAAGAGGGAACCAGGATCTCAAGGGCTC TR:VR 39:17 16:0 chr4 56210591 d_1706 G . Too_small_size END=56210627;SVTYPE=DEL;SVLEN=-36 TR:VR 40:22 14:0 chr8 109339013 r_531 G . PASS END=109478092;SVTYPE=DUP;SVLEN=139079 TR:VR 103:14 19:0 chr8 142888759 d_2060 A . Too_small_size END=142888801;SVTYPE=DEL;SVLEN=-42 TR:VR 68:14 15:0 chr8 55911228 i_1516 C . Too_small_size END=55911229;SVTYPE=INS;SVINSLEN=40;SVINSSEQ=GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT TR:VR 36:7 11:0 chr11 1121054 d_345 T . PASS END=1121104;SVTYPE=DEL;SVLEN=-50 TR:VR 26:17 13:0 chr12 420937 i_246 A . PASS END=420937;SVTYPE=INS;SVINSLEN=371;SVINSSEQ=CACACATAGCAGCACACTCCATGCTCCATTACAGTGCTCTTCTGTGTGTGTGTGCTGGGAGTGAGAGGGTAAAACACACATAGCAGCACCCTCCATGTTCCATTACAGTGCACTTCTGTGTGTGTGTGCTGGGAGTGAGAGGGTAAAATACACATAGCAGCACCCTCCATGTTCCATTACAGTGCTCTTCTGTGTGTGTGTGCTGGGAGTGAGAGGGTAAACACACATAGCAGCACCCTCCATGTTCCATTACAGTGCACTTCTGTGTGTGTGTGCTGGGAGTGAGAGGGTAAACACACATAGCAGCACACTCCATGTTCCATTACAGTGCGCTTCTGTGTGTGTGTGCTGGGGAGTGAGAGGGTAAAATA TR:VR 69:7 16:0 chr18 53484790 d_1017 A . Too_small_size END=53484832;SVTYPE=DEL;SVLEN=-42 TR:VR 30:21 8:0 chr2 105922981 d_1234 G . PASS END=105923094;SVTYPE=DEL;SVLEN=-113 TR:VR 44:16 10:0 chr3 198173324 i_1199 T . Too_low_VAF END=198173324;SVTYPE=INS;SVINSLEN=111;SVINSSEQ=TAAGGTTAGGGTTAAAGATTTAGGGTTAGGGTTAAGGGTTAGGGTTAGGGTTAGGGTTTAGGGTTAGGAGTTGGGTTAAGGTTAGGGTTACAGAGGTTACAGGGTTAGGGT TR:VR 447:3 154:1 chr4 133085044 r_447 A . PASS END=133145729;SVTYPE=DUP;SVLEN=60685 TR:VR 42:10 25:0 chr4 57168052 d_1707 C . PASS END=57172244;SVTYPE=DEL;SVLEN=-4192 TR:VR 39:14 18:0 chr5 11881 i_1278 A . Too_low_VAF END=11942;SVTYPE=INS;SVINSLEN=155;SVINSSEQ=ACCCTAACCCTAACCCTAACCCTGAACCCTGAACCCCTAACCCTGACCCTGACCCCGAACGCTGACCAGCCGTGACCTTGACCCCTAACCCTATTTCGCCCCGAACCCGAACCCGAACCGGGAACCCTAACCCTCAACCCTAACCCTCACCCTCC TR:VR 120:5 51:0 chr5 37517731 r_460 A . PASS END=37557692;SVTYPE=DUP;SVLEN=39961 TR:VR 78:13 25:0 chrX 9982741 r_571 C . PASS END=10178974;SVTYPE=DEL;SVLEN=-196233 TR:VR 77:12 23:0 chr1 85764628 d_66 T . PASS END=85764675;SVTYPE=DEL;SVLEN=-47 TR:VR 43:23 17:0 chr12 421009 i_247 A . PASS END=421009;SVTYPE=INS;SVINSLEN=740;SVINSSEQ=AAACACACATAGCAGCACCCTCCATGTTCCATTACAGTGCACTTCTGTGTGTGTGTGCTGGGAGTGAGAGGGTAAAACACACATAGCAGCACCCTCCATGTTCCATTACAGTGCACTTCTGTGTGTGTGTGCTGGGAGTGAGAGGGTAAAATACACATAGCAGCACCCTCCATGTTCCATTACAGTGCTCTTCTGTGTGTGTGTGCTGGGAGTGAGAGGGTAAAACACACATAGCAGCACCCTCCATGTTCCATTACAGTGCACTTCTGTGTGTGTGTGCTGGGAGTGAGAGGGTAAACACACATAGCAGCACCCTCCATGTTCCATTACAGTGCGCTTCTGTGTGTGTGTGCTGGGAGTGAGAGGGTAAAAACACACATAGCAGCACCCTCCATGTTCCATTACAGTGCACTTCTGTGTGTGTGTGCTGGGAGTGAGAGGGTAAAAACACACATAGCAGCACACTCCATGTTCCATTACAGTGCACTTCTGTGTGTGTGTGCTGGGAGTGAGAGGGTAAAATACACACATAGCAGCACCCTCCATGCTCCATTACAGTGCACTTCTGTGTGTGTGTGCTGGGGTGAGAGGTAAATACACACATAGCAGCACCCTCCATGTTCCATTACAGTGCACTTCTGTGTGTGTGTGCTGGGAGTGAGAGGGTAAACACACATAGCAGCACCCTCCATGTTCCATTACAGTGCACTTCTGTGTGTGTGTGCTGGGGTGAGAGGGTA TR:VR 69:8 16:0 chr16 2104922 r_217_0 A [chrX:1587610[CTC . Too_low_VAF SVTYPE=BND;MATEID=r_217_1;SVINSLEN=2;SVINSSEQ=CT TR:VR 472:8 112:1 chrX 1587610 r_217_1 C [chr16:2104922[AGC . Too_low_VAF SVTYPE=BND;MATEID=r_217_0;SVINSLEN=2;SVINSSEQ=AG TR:VR 472:8 112:1 chr18 56028286 d_1018 C . PASS END=56028334;SVTYPE=DEL;SVLEN=-48;SVINSLEN=2;SVINSSEQ=TA TR:VR 23:16 16:0 chr3 182141654 d_1578 G . Too_small_size END=182141693;SVTYPE=DEL;SVLEN=-39 TR:VR 91:14 10:0 chr5 40198850 r_461 G . PASS END=40200894;SVTYPE=DEL;SVLEN=-2044 TR:VR 42:15 13:0 chr7 151104782 d_1987 C . Too_small_size END=151104817;SVTYPE=DEL;SVLEN=-35 TR:VR 37:15 17:0 chr7 52984174 d_1939 C . PASS END=52984428;SVTYPE=DEL;SVLEN=-254 TR:VR 42:14 15:0 chr8 110814986 i_1524 C . PASS END=110814986;SVTYPE=INS;SVINSLEN=110;SVINSSEQ=AACATGTACCCTAAAACTTAGAGTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAATTCAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA TR:VR 60:21 15:0 chr8 57436735 d_2014 A . PASS END=57438535;SVTYPE=DEL;SVLEN=-1800 TR:VR 35:11 14:0 chrX 99940058 d_2295 C . PASS END=99941357;SVTYPE=DEL;SVLEN=-1299 TR:VR 47:16 13:0 chr1 183333802 d_201 G . PASS END=183338086;SVTYPE=DEL;SVLEN=-4284 TR:VR 31:11 16:0 chr10 29764616 r_67 C . PASS END=29778336;SVTYPE=DUP;SVLEN=13720 TR:VR 60:9 24:0 chr18 56546165 d_1019 A . Too_small_size END=56546210;SVTYPE=DEL;SVLEN=-45 TR:VR 21:12 9:0 chr2 1106016 i_710 A . PASS END=1106016;SVTYPE=INS;SVINSLEN=104;SVINSSEQ=GTGGATGCGTGCTGTCACTCGGGTGCAGGGTGTGGAGAGCTCCTTGGTAATAGTGGACACCTGCTGTCACTCAGGTGCAGGGTATGGAGAGCTGCTTGGTAATA TR:VR 30:5 16:0 chr2 183757954 r_329_0 T ]chr7:136636844]A . PASS SVTYPE=BND;MATEID=r_329_1 TR:VR 97:13 31:0 chr7 136636844 r_329_1 A A[chr2:183757954[ . PASS SVTYPE=BND;MATEID=r_329_0 TR:VR 97:13 31:0 chr2 82717256 i_738 C . PASS END=82717309;SVTYPE=INS;SVINSLEN=3263;SVINSSEQ=ACTGCATCCCACACTACCCTCACTTTTGATGTGGATTTGAAGTTCAGGAGTCTCTAAGACTATCCTCAATTTCAGTTATTCACTAGAAGGTCTAAACAGAAATCACTGGAAGCTGTTATAGTGAGTTGTGGTTTATTACAGAAAAAAGATACAGGTTAAAGACAGTCAAGAGAGGTTATGCATGGGACAGAATCCAGAAAATTATTCGTGCAGTGTTCTTCACCCAGCGGAGTAATGAACAGTGTTAACTTTTCTAGCAATAATGTGTGAAAAAACGTGTCAACCAGAGATGCTCAGTAGCAGAGATGCTACTGAGGCTTGGCCACATGGGCATTATTGGCCTCCAAAGTGGCTGACCTTTGTCTGTAGACAAAGGTGATACCAGGTGATCCAAACCTTCCACATATACCAGACTGTCTAGCATGGTACAAGGCCCCCAGGTACACAAAGGTATTCTTATCCAGCAGGAAATTTTAAGGGTTTAGAGAGTATTACCCAGGACCCCAGGACAAAGTCCAGACCTCTCTTTGGGCAAAGTTAAATTCTTTGCTACACAGAATTATTCAAACATATACTTAAAGGTGTGTTTTTGTTTGTTTAGGGAAAAGTTTGCATGTATGTTTTCACTTTTAAAAATAATTTGGAACAGAACACATCAAATTGACAATAATAATTTATGAGGAAGAGATGAGATTCTGAGAATGAAAGAATCTTTGGTCTTTTACTGTTTCTGTGCACTTTTTACAAGCATGTATTCATGCAATGCATTTTAATTAAGTATTTAAAGAACATATATCAGAAAGAAAATTATTTACTTGTCAAAGGATAGCAATTAAATATTAAAATTTGACACTGTTAAGAATATATAATGAACATGTGCCCAAAATTTTATTCAACTCATTAATGCTAAGAACATTTGGGAAACAGGAGTTTATCAGCTAATTAGAAAGTGCAGAAGTTAAAAAAGTATCAGAACAAGACTGCTGCTAGATGAAATTAGAACATTTTCTCCATAATAATAAAATCATACCCTTTGAACCCCCAAAGCGTTATCTTCCTATCAGACAAAAATCTACTTTTTAACCTGAGTCTTTACAGTATCTGATCTCTGATCTCTGATAAATCTGTAAATAACAAAGACAAACATTATTCACCAACAATTAAATAATTTTTGAGCTACTTTGTAAAAAATGTCCCAGTAGGACATGCACTTCTTTCTTTTTTTGAGACGGAGTTCGCTCTTGTTGCCCAGGCTGGAGTTCAAAGGCATGATCTCGGCTCACCGCAACCTCTGCCTCCTGGGTTCAAGCAATTCTTCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCGATCACCAACATGCCTGGCTAATTTTTTTTTTTTTTATTATTTTTAGTAGAAATGGTGTTTCTCTGTGTTGGTCAGGCTGGTCTTGAACTCCCGACCTCAGGTGATCCGCCTGCATCAGCCTCCCAAAATGCTGGAATTACAGGCCTGAGCCACGGCGCCCAGCGATATGGACTTATTTCTAAGTGATGAGTTATTTTCTTTTTAACTGCATTTAGCCGTATTTATAATGGAATTAATATTAATTAGTTCTCGAGAATGCTGTATTTCTGAGAAGACTCATCTCTATGCAGTTATACATAGAGATCAAATGAGACTTTTACCTTTAATTCTTTGCAGTTTTGATTTTGAAAGCAAAAGATGCTTATGATGGCAATGAGAATAGGTATTAGGGTCTCTAGTAGATTATTTTTGTTAAACCTTTGACCAGGTTTTCCATAGTAGAGTTGTTAATGTAGCATTAGAAATTGTTTCTACCAAAAACTCATGAAACGTTTGAAAGAAAAAATGCTGAAGTTGCTATGAATATGCTCACCATGGAAAGAGTGAAAGTGTAAAAATATATTTTAACTGTTTAGAACATAATCTTATAAAAATGGCAAAATTATTGCTTTATTTTGTCTGTTAATAGCATTGTTATTAACTTTACGTTAATATAGCTCTTTTTGTGATTATGGTAAAAGATAAAAATCAAATGTAATAAATTAGTCTCAAGTATTACTGTACATTTAATTGATAAATTATAGTTTCATTTATTTAACATAACTTCTTAACTCTTTCTTTAATTTGATCATCTCAAGCATCCTGAAATTATTTAGTAATTATACTTCACAAGATAGAATGTAGGAAAATGTTTTTACTTTAAGTTTTAAAAGTTATATTAGTAATGACACATTTATTTTAGGGAGAGATTTATTTGTAAGAGCTTTGTGTTGTAAAAATTTTAATAGGGTTATTCTGTAATTATAAAAGGAATTCTTTCTTTCCCCTTCCCCAGCAATTGTTTGTTTTATTATGTTAGGGAAAATAAATGAACAAAACAAAACCTCTAAGAGCTAGATTAAGGGAACTTGCAACAATTATGAATAACTTTTAATTCCTTCTTCACTTTAGAAAGTTTTCTACCATGCCAATCTATGTCAGAACTTTATCATCATTTCCAGTCCCAAATTTACAGGCTCAAATTGGTATTAGTGGCTGTCATGAAGCCCACAGAGAACCTCACAGTTTTTCCCTAGGCTGCCTACTTTTTAGTTTATAAACATGGTGTGTTACTCCCTGCATTTTAGCATTTTGTTTTTCTCTTGCCAGCAATGTTTTTCTTTCTTTGATAATGAAAAAAAAAACACAATCAATAAACAACAAACAAACAACCAAAAAGTAGCGTTAAAGAAAGCTGTCCATTAGACCTCTCCAATTAATAAAAATGGCCAGAGATAAACACTAATAGAAGGAAAGAAAAAGACCTTTGGTAAGAACATAAAGAAAGAACAGTGAGGATCACCCAATGAGAAAGGCACTGGAGTTTTGTTAGACTTCATGAAAATAGCATGAGATTGGAGGACCAAATCAAAGCCTAGATTAGAAATTCCTTATATTTATTGTCTTCATTTATTCAGGCTGCTTTAACAAAATATCACCAACCGGGTGGCTTATAAACAACAGAAATATATTTCTTACAGATATTATCTGGAGCCTGGGAAGCTCAAGATGAAGATCTAGTGGATTAAGTATCTAGTGAGGGCTCACTTCCTTAAAAGTGTGCGTTCTTGCTGTGTTCTCACATGATGCAAGGAACAAGAATTAATTCTTGTTGATGCAAGGAATTAATTCTTGATGATGCAAGGAATTAATTCTATTCATGAGCATGGGGCCCTCACAAAGTCCCCAGCTCCCAAATACCATTATTTGGG TR:VR 52:18 14:0 chr20 13848199 r_351 A . PASS END=13995572;SVTYPE=DUP;SVLEN=147373;SVINSLEN=191;SVINSSEQ=TCAAATATCTGGAGAAGAAGAAGAAGAAGAGGAAGAAGAAGAAGAGGAAGAAGAAGAAGAGGAAGAAGAAGAAGAAGAGGAAGAGGAAGAAAGAAGAAGAACAAGAAGAAGAAGAAGTCAAATATCTGGAGAAGAAGAAGAAGAAGAGGAAGAAGAAGAAGAAGAGGAGGAGGAAGAAGAAGAAGAAGAAG TR:VR 93:15 36:0 chr22_KI270736v1_random 156789 d_1509 A . Too_small_size;Too_low_VAF END=156824;SVTYPE=DEL;SVLEN=-35 TR:VR 710:6 297:1 chr4 33496959 d_1661 G . PASS END=33498128;SVTYPE=DEL;SVLEN=-1169 TR:VR 35:13 20:0 chr5 123884405 d_1820 T . PASS END=123884598;SVTYPE=DEL;SVLEN=-193;SVINSLEN=2;SVINSSEQ=TT TR:VR 21:16 18:0 chr6 101864198 d_1872 G . Too_small_size END=101864234;SVTYPE=DEL;SVLEN=-36 TR:VR 23:10 22:0 chr8 60499471 d_2015 A . Too_small_size END=60499507;SVTYPE=DEL;SVLEN=-36 TR:VR 51:20 12:0 chrUn_GL000216v2 160142 i_1624 A . Too_low_VAF END=160142;SVTYPE=INS;SVINSLEN=411;SVINSSEQ=TCCAAGACGAGAGTCCGCCACCTGGGTGATCAGTGAAGACATATGTGACAATGCCTCCAGTAGGCAGAGCCTAGAGAAGGGTCCCATCACCTGGGTGATCAGTGCAGAGTTATTTCACAATGCCCCTGCAGGCAGAGCGTAAGCCAGAGTTACATCACCTAGATGATCAGTGCAGAGATATGTCACAAGGCCCCTATAGGCAGAGCCTGGACAAGAGTTACATCACCTCAGTGATCAATGCAGTGATATGTCACTATGCCCTGTAGGCAGAGCCTAGTCAAGCGTTACATCACCTGGGTGATCAGTGCAGTGAGATATGTCACAATGCCCCCATACGCAGATCCAACACAAGTTTTACATCACCTGGGTGATCAGTGTAGAGATATGTCACAATGCCCCCATAGGCAGAGC TR:VR 611:4 212:1 chrX 34508130 i_1796 T . PASS END=34508150;SVTYPE=INS;SVINSLEN=342;SVINSSEQ=GTCTTGATAAACGCTTTCAGTTTTATAAGTCAAACTTTTTTTCAGTTGTATAATGTTTTCCTAAATTATATTTTTAATTGATTTCCCTTTGTTATTTATTGATTTTGATCTCTTTCTTAGGAACATAAATTTTCTCAATCTATTTTCCACATGTCTTTTCTTGTGGTTTATAACTGTCTTCTTCTTTTCTTGTTATTCTATATCAGGGAAAATGTCCTGGGTTTGTCCTCTATATCACGAATTCAGTTTCTGTAATACCGTTACTATGCTTCACTGTTTGTAAGACTGTATTTCAGCCTGCAATATTAAATCTATTGTCATGTTTCCTTGTCTCACTGCACT TR:VR 39:16 18:0 chr1 186385749 d_202 T . PASS END=186386512;SVTYPE=DEL;SVLEN=-763 TR:VR 33:3 8:0 chr10 30558898 r_68 G . PASS END=30769914;SVTYPE=DUP;SVLEN=211016 TR:VR 102:22 25:0 chr16 63121090 d_895 T . PASS END=63127042;SVTYPE=DEL;SVLEN=-5952 TR:VR 45:13 22:0 chr17 81450056 r_251 T . PASS END=82203755;SVTYPE=DUP;SVLEN=753699 TR:VR 98:18 37:0 chr20 14958307 d_1311 G . PASS END=14958422;SVTYPE=DEL;SVLEN=-115 TR:VR 45:16 17:0 chr3 183018314 i_1128 T . PASS END=183018314;SVTYPE=INS;SVINSLEN=831;SVINSSEQ=ACTGGTCAACCAGAGGCCTACAGGTCAAATGCACTGGTCAAATCAGAGGCCTACAGCCCAAATGCACTGGTCAAATCAGAGGCCTACAGGTCAAAATGCACTGGTCAAATCAGAGGCCTGTACAGCCCAAATGCACTGGTCAAATCAGAGGCCTACAGCCCAAATGTACTCGTCAAATAAGAGGCCTACAGGTCAAATGCACTGGTCAAATCAGAGCCTCACAGCCCAAATGCACTGGTCAAATCAGAGGCCTACAGCCCAAATGCACTGGTCAAATCAGAGGCCTACAGGTCAAATGCACTGGTCAAATCAGAGGCCTACAGCCCAAAATGCACTGGTCAAATCAGAGGCACCACAGGTCAAATGTACTGGTCAATAACCAGAGGCCTACAGCCCAAATGTACTGGTCAAATCAGAGGCCTACAGCCCAAATGCACTGGTCAAATCAGAGGCCCACAGCCCAAATGCACTGGTCAAATCAGAGGCCTACAGGTCAAATGCACTGGTCAAATCAGAGGCTCACAGCCCAAATGCACTGGTCAAATCAGAGGCCTACAGCCCAAATGTACTCGTCAAATAAGAGGCCTACAGGTCAAATGCACTGGTCAAATCAGAGGCCTACAGCCCAAATGCACTGGTCAAATCAGAGGCCTACAGCCCAAATGCACTGGTCAAACCGGAGGCCTACAGGTCAAATGCACTGGTCAAATCAGAGGCCTACAGCCCAAATGCACTGGTCAAATCAGAGGCCTACAGCCCAAATGTACTGGTCAAATCAGAGGCCCACAGGTCAAATGTACTGGTCAATCAGAGGCCTACAGCCCAAATGCA TR:VR 72:5 6:0 chr4 34501608 d_1662 T . PASS END=34501698;SVTYPE=DEL;SVLEN=-90 TR:VR 29:9 19:0 chr4 58038989 d_1710 A . Too_small_size END=58039030;SVTYPE=DEL;SVLEN=-41 TR:VR 29:13 11:0 chr7 153506470 i_1475 T . Too_small_size END=153506470;SVTYPE=INS;SVINSLEN=48;SVINSSEQ=TTTATTTATATAATATATATAATAATATACTACATATATATATTTTAT TR:VR 39:3 24:0 chr7 55497153 r_498_0 A [chr7:65811773[G . Too_low_VAF SVTYPE=BND;MATEID=r_498_1 TR:VR 98:3 39:0 chr7 65811773 r_498_1 G [chr7:55497153[G . Too_low_VAF SVTYPE=BND;MATEID=r_498_0 TR:VR 98:3 39:0 chr8 63303474 d_2016 T . PASS END=63303616;SVTYPE=DEL;SVLEN=-142 TR:VR 36:13 15:0 chrX 34617888 d_2282 A . PASS END=34617943;SVTYPE=DEL;SVLEN=-55 TR:VR 29:11 18:0 chr1 186745227 r_46 T . PASS END=187129045;SVTYPE=DUP;SVLEN=383818 TR:VR 92:11 33:0 chr14 16096518 i_329 T . Too_low_VAF END=16096518;SVTYPE=INS;SVINSLEN=83;SVINSSEQ=TCATATTTTATGTACAGTATATAATACATGCTTTGGGTACTTTGATATTTTTTGTACAGTATAGAATATATACCTTGGGTACT TR:VR 793:3 572:1 chr16 21512978 r_220 C . PASS END=21527027;SVTYPE=DUP;SVLEN=14049 TR:VR 138:32 31:0 chr16 64213855 d_896 G . PASS END=64214363;SVTYPE=DEL;SVLEN=-508 TR:VR 32:12 9:0 chr18 57658512 d_1021 A . PASS END=57658649;SVTYPE=DEL;SVLEN=-137 TR:VR 23:15 16:0 chr2 187296687 r_330 T . PASS END=187302889;SVTYPE=DUP;SVLEN=6202 TR:VR 86:6 19:0 chr2 235764735 i_836 T . PASS END=235764735;SVTYPE=INS;SVINSLEN=114;SVINSSEQ=GGGAGCGGCCCGTGGGGTGGGGGCATCTGGGAGCGCCCGTGGGGTGGGGCATCTGGGAGCGCCCGTGGGGTTGGGGGAGATCTGGGAGCGCCCGTGGGGTGGGGTGGCATCTCG TR:VR 29:4 12:0 chr21 5348628 r_364 T . Too_low_VAF END=10758003;SVTYPE=DUP;SVLEN=5409375;SVINSLEN=146;SVINSSEQ=GGACGAATGCACACATCACAAAGAAGTTTCTTAGAATGCTTCTGTCTAGTTATTATATGAATATATTTTGTTATCCACCATAGGCCTCAAAGCTCTCCAAATGTCCACTTGCAGATTCTACAAAGAGAGTGTTCTGGGAGAGGAAC TR:VR 326:3 145:1 chr4 139803588 d_1735 C . PASS END=139803889;SVTYPE=DEL;SVLEN=-301 TR:VR 27:18 12:0 chr6 106141154 d_1873 C . Too_small_size END=106141189;SVTYPE=DEL;SVLEN=-35 TR:VR 19:11 17:0 chr10 33522512 r_69 G . PASS END=33602476;SVTYPE=DUP;SVLEN=79964;SVINSLEN=10;SVINSSEQ=TGGCCTCTCT TR:VR 88:15 37:0 chr13 114353968 i_319 G . PASS END=114353968;SVTYPE=INS;SVINSLEN=268;SVINSSEQ=CGGTGGAGGGTGAGGTGAGGTGAGGGTGAGGGTGAGGGCTAGGCCGGGGTTAGGGTTAAGAAGAAATAGGTTAGGGGTTAGGGTTGGGGCCAGGGTAAGGCCAGTTAGGCCGTTAGGGTTAGGGTTAGCCAGGTTAGGCCAGGTTAGGGGCCAAGGGTTAGGGTTAGGGTAAGGGTTAAGCCAGTTAGGCGTAGGGTTAGGGTGAGGGTTAGGTGAGGGTGAGGGTGAGGCTAGGGTGAGGGTGAGGGTTAGGGTGAGGGTAGGGTTG TR:VR 35:4 16:0 chr15 24377956 r_195 A . PASS END=24395947;SVTYPE=DEL;SVLEN=-17991 TR:VR 51:14 32:0 chr16 22026262 r_221 A . PASS END=22071752;SVTYPE=DUP;SVLEN=45490;SVINSLEN=1;SVINSSEQ=T TR:VR 51:8 30:0 chr16 64508815 r_239 T . PASS END=75838314;SVTYPE=DUP;SVLEN=11329499 TR:VR 112:15 28:0 chr2 189412560 r_331 T . Too_low_VAF END=189416821;SVTYPE=DUP;SVLEN=4261 TR:VR 78:3 23:0 chr3 124822197 i_1099 C . PASS END=124822197;SVTYPE=INS;SVINSLEN=292;SVINSSEQ=CACATATCCTCCTCCCTGCTCCCTCACGCAAGTCCTTGGTTTAGCGCAGAGGCACACATCTTCACACATCATTTGAATAAACTTAATCTGGACAAGGCATCTGTGTCCTCCACTGCTGTAGAGTCATCCATTCTATTTCACCAAAACAGAATGGGGGGAGTGGCTTTCTTTACATTTCACAGAACGGAAAAGTGAGGGTCAGATTATCCAAGGAACAGAGCTATTTGCAGAAGACTAGGAATGAAAGACAGGTCTCCTGGATTCCTACCTGTACTCTTTCTCCTGATTACAA TR:VR 65:9 17:0 chr4 60170595 r_440 T . PASS END=60175258;SVTYPE=DUP;SVLEN=4663 TR:VR 39:5 13:0 chr5 12585535 d_1785 A . PASS END=12585745;SVTYPE=DEL;SVLEN=-210 TR:VR 41:13 18:0 chr6 60477594 i_1374 T . PASS END=60477594;SVTYPE=INS;SVINSLEN=345;SVINSSEQ=AAAACTTCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTACACTCCAGCCTGGGTGACAGAGCCAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA TR:VR 41:15 22:0 chr1 93816468 d_67 C . PASS END=93816597;SVTYPE=DEL;SVLEN=-129 TR:VR 38:14 10:0 chr10 34006416 d_254 G . PASS END=34006866;SVTYPE=DEL;SVLEN=-450 TR:VR 35:13 18:0 chr12 421233 d_406 T . PASS END=421394;SVTYPE=DEL;SVLEN=-161;SVINSLEN=10;SVINSSEQ=ACACATAGCA TR:VR 70:5 16:0 chr16 22426064 r_222 T . PASS END=83927078;SVTYPE=DUP;SVLEN=61501014 TR:VR 108:52 27:0 chr2 112489769 r_315_0 T [chr2:112590593[CCTTCTCTTCCTTCA . PASS SVTYPE=BND;MATEID=r_315_1;SVINSLEN=14;SVINSSEQ=CCTTCTCTTCCTTC TR:VR 113:17 29:0 chr2 112590593 r_315_1 A [chr2:112489769[GAAGGAAGAGAAGGA . PASS SVTYPE=BND;MATEID=r_315_0;SVINSLEN=14;SVINSSEQ=GAAGGAAGAGAAGG TR:VR 113:17 29:0 chr2 191155782 d_1256 T . PASS END=191156034;SVTYPE=DEL;SVLEN=-252 TR:VR 82:38 15:0 chr2 86230129 r_305_0 C C[chr6:37177010[ . PASS SVTYPE=BND;MATEID=r_305_1 TR:VR 71:8 28:0 chr6 37177010 r_305_1 T ]chr2:86230129]T . PASS SVTYPE=BND;MATEID=r_305_0 TR:VR 71:8 28:0 chr20 16952675 d_1312 C . Too_small_size END=16952714;SVTYPE=DEL;SVLEN=-39 TR:VR 39:12 22:0 chr21 5381406 d_1377 T . PASS END=5381529;SVTYPE=INS;SVINSLEN=123;SVINSSEQ=GTAAACCCACTGAGGCCTATGGGGAAATAGAAAATACCTTCACATAAAAACTAGACAGATACTTTCTGAGAAACTTATTTGTCATGTGTGACTTCATCTCACCAGGTTGAAATTTTCTCTTGA TR:VR 37:4 18:0 chr3 125766909 r_416_0 G G]chr8:12013863] . PASS SVTYPE=BND;MATEID=r_416_1 TR:VR 49:3 20:0 chr8 12013863 r_416_1 T T]chr3:125766909] . PASS SVTYPE=BND;MATEID=r_416_0 TR:VR 49:3 20:0 chr3 183733276 d_1579 G . PASS END=183733346;SVTYPE=DEL;SVLEN=-70;SVINSLEN=3;SVINSSEQ=AAA TR:VR 56:16 14:0 chr6 110884424 d_1875 C . PASS END=110884889;SVTYPE=DEL;SVLEN=-465 TR:VR 26:18 13:0 chrX 1588436 d_2269 C . Too_low_VAF END=1588515;SVTYPE=DEL;SVLEN=-79 TR:VR 478:4 110:1 chr1 189216584 r_47 T . PASS END=189258832;SVTYPE=DUP;SVLEN=42248 TR:VR 90:12 18:0 chr1 94382330 i_47 C . PASS END=94382330;SVTYPE=INS;SVINSLEN=67;SVINSSEQ=TTGGTTTACTTTTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGAAAT TR:VR 34:13 12:0 chr10 35667094 i_142 C . PASS END=35667104;SVTYPE=INS;SVINSLEN=420;SVINSSEQ=CATCACCACCATGCCATCACCACCATCACCACTGTAACTGCCATCCCCACCATCATCACCACCATCACCACACTAACACCATCACCACCACCATCATCACCACCATCACCATCACTATCACCACCACCATCACCACCATCACTACCACCACCATCATCATCACCACCATCACCACCACCATCATCACCACCACCACCATCACCACCACCACCACCACCACCACCACCATCACCACCATCACCACCACCACCATCATCATCACCACCATCACCACCACCATGTTCACCACCACCACCATCATCACCACCACCACCACCATCACCACAATCACCACCACCACCATCACCACCATCACCACCACCACCATCATCATCACCACCACCACCACCATCATCACCACCATCACCACCACCACCATCA TR:VR 36:3 10:0 chr11 124526519 r_109 C . PASS END=124529710;SVTYPE=DEL;SVLEN=-3191 TR:VR 25:15 23:0 chr11 56986730 d_375 A . PASS END=56987961;SVTYPE=DEL;SVLEN=-1231 TR:VR 40:17 20:0 chr16 69799885 d_898 T . PASS END=69800853;SVTYPE=DEL;SVLEN=-968 TR:VR 57:20 18:0 chr17 8282685 r_241 C . PASS END=8297998;SVTYPE=DUP;SVLEN=15313 TR:VR 42:10 16:0 chr2 112590565 r_316_0 G G]chr2:112605394] . PASS SVTYPE=BND;MATEID=r_316_1 TR:VR 91:14 20:0 chr2 112605394 r_316_1 A A]chr2:112590565] . PASS SVTYPE=BND;MATEID=r_316_0 TR:VR 91:14 20:0 chr2 191292048 d_1257 G . PASS END=191292160;SVTYPE=DEL;SVLEN=-112 TR:VR 62:30 12:0 chr2 23714576 r_289_0 C C]chr3:185816373] . PASS SVTYPE=BND;MATEID=r_289_1 TR:VR 78:13 30:0 chr3 185816373 r_289_1 T T]chr2:23714576] . PASS SVTYPE=BND;MATEID=r_289_0 TR:VR 78:13 30:0 chr2 86230146 r_306_0 G ]chr6:37176506]T . PASS SVTYPE=BND;MATEID=r_306_1 TR:VR 70:15 28:0 chr6 37176506 r_306_1 T T[chr2:86230146[ . PASS SVTYPE=BND;MATEID=r_306_0 TR:VR 70:15 28:0 chr20 17786089 d_1313 A . PASS END=17786410;SVTYPE=DEL;SVLEN=-321 TR:VR 35:17 17:0 chr21 22301142 r_371 T . PASS END=37752491;SVTYPE=DEL;SVLEN=-15451349 TR:VR 66:16 23:0 chr22 12189934 r_382_0 G ]chrUn_KI270743v1:163637]TATCACCTACAAACTCAGCAGTTTCACTGAGTTACTCCCTGTCTCTCTCATGTCTTCACCCCCAGCCCCCTGGGACTCTCCTGTCTGTCCCAGCTACTCCCCCACCACGCCCAGATTTCAGAGGAG . Too_low_VAF SVTYPE=BND;MATEID=r_382_1;SVINSLEN=125;SVINSSEQ=TATCACCTACAAACTCAGCAGTTTCACTGAGTTACTCCCTGTCTCTCTCATGTCTTCACCCCCAGCCCCCTGGGACTCTCCTGTCTGTCCCAGCTACTCCCCCACCACGCCCAGATTTCAGAGGA TR:VR 100:4 46:1 chrUn_KI270743v1 163637 r_382_1 G GTCCTCTGAAATCTGGGCGTGGTGGGGGAGTAGCTGGGACAGACAGGAGAGTCCCAGGGGGCTGGGGGTGAAGACATGAGAGAGACAGGGAGTAACTCAGTGAAACTGCTGAGTTTGTAGGTGATA[chr22:12189934[ . Too_low_VAF SVTYPE=BND;MATEID=r_382_0;SVINSLEN=125;SVINSSEQ=TCCTCTGAAATCTGGGCGTGGTGGGGGAGTAGCTGGGACAGACAGGAGAGTCCCAGGGGGCTGGGGGTGAAGACATGAGAGAGACAGGGAGTAACTCAGTGAAACTGCTGAGTTTGTAGGTGATA TR:VR 100:4 46:1 chr3 126037069 r_417_0 T [chr6:35867752[AG . PASS SVTYPE=BND;MATEID=r_417_1;SVINSLEN=1;SVINSSEQ=A TR:VR 109:19 32:0 chr6 35867752 r_417_1 G [chr3:126037069[TG . PASS SVTYPE=BND;MATEID=r_417_0;SVINSLEN=1;SVINSSEQ=T TR:VR 109:19 32:0 chr4 145422865 r_448 A . PASS END=145429760;SVTYPE=DUP;SVLEN=6895 TR:VR 31:6 17:0 chr4 40274835 d_1664 T . Too_small_size END=40274873;SVTYPE=DEL;SVLEN=-38 TR:VR 39:13 15:0 chr6 119803121 d_1876 G . PASS END=119803235;SVTYPE=DEL;SVLEN=-114 TR:VR 29:17 19:0 chr9 19337528 d_2070 G . PASS END=19342084;SVTYPE=DEL;SVLEN=-4556 TR:VR 34:8 17:0 chr1 190339963 d_205 A . Too_small_size END=190340007;SVTYPE=DEL;SVLEN=-44 TR:VR 38:15 15:0 chr10 3666313 d_248 T . PASS END=3666360;SVTYPE=DEL;SVLEN=-47 TR:VR 31:8 15:0 chr12 421310 i_252 C . PASS END=421310;SVTYPE=INS;SVINSLEN=442;SVINSSEQ=ACACATAGCAGCACCCTCCATGTTCCATTACAGTGCTCTTCTGTGTGTGTGTGCTGGGAGTGAGAGGGTAAACACACATAGCAGCACCCTCCATGTTCCATTACAGTGCACTTCTGTGTGTGTGTGCTGGGAGTGAGAGGGTAAACACACATAGCAGCACACTCCATGTTCCATTACAGTGCGCTTCTGTGTGTGTGTGCTGGGAGTGAGAGGGTAAATACACATAGCAGCACACTCCATGTTCCATTACAGTGCGCTTCTGTGTGTGTGTGCTGGGAGTGAGAGGGTAAAATACACACATAGCAGCACCCTCCATGCTCCATTACAGTGCACTTCTGTGTGTGTGTGCTGGGAGTGAGAGGGTAAACACACATAGCAGCACACTCCATGTTCCATTACAGTGCGCTTCTGTGTGTGTGTGCTGGGAGTGAGAGGGTAAATA TR:VR 70:12 16:0 chr16 2781730 d_798 G . Too_low_VAF END=2781847;SVTYPE=DEL;SVLEN=-117 TR:VR 72:3 13:0 chr2 113247460 r_317 G . PASS END=113342562;SVTYPE=DUP;SVLEN=95102 TR:VR 93:10 31:0 chr2 191555184 d_1258 G . PASS END=191557180;SVTYPE=DEL;SVLEN=-1996;SVINSLEN=3;SVINSSEQ=TGA TR:VR 62:29 12:0 chr21 29630017 r_372_0 C [chr21:29630728[A . PASS SVTYPE=BND;MATEID=r_372_1 TR:VR 41:17 16:0 chr21 29630728 r_372_1 A [chr21:29630017[A . PASS SVTYPE=BND;MATEID=r_372_0 TR:VR 41:17 16:0 chr22 12345236 i_1006 C . Too_low_VAF END=12345236;SVTYPE=INS;SVINSLEN=227;SVINSSEQ=TTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCGAAAATTTTCTCCCATTTTGTGGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTTTGCAGAAGCTCTTTAGTTTAATTAGTTCCCATTTGTCAATTTTGGATTTTGTTGCCATTGCTTTTGGTGTTTTCGACATGAAGTCATTGCCCATGCCTAGAGA TR:VR 87:4 29:0 chr3 19862225 d_1532 G . Too_small_size END=19862263;SVTYPE=DEL;SVLEN=-38 TR:VR 45:15 18:0 chr4 40749427 d_1665 A . PASS END=40749524;SVTYPE=DEL;SVLEN=-97 TR:VR 36:14 17:0 chr5 1332901 i_1295 G . PASS END=1332901;SVTYPE=INS;SVINSLEN=523;SVINSSEQ=GGGACTACTGTATATACACTGGATGAGGATAAGGGGGGACTACTGTATACACACCGGATGAGGATAAGGGGGACTACTGTATACACACCGGATGAGGATAGGGGGGACTACTGTATACACACCGGATGAGGATAAGGGGGACTACTGTATACACACCGGATGAGGATAAGGGGGGACTACTGTATACACACCGGATGAGGATAAGGGGGGACTACTGTATACACACCGGATGAGGATAAGGGGGGACTACTGTATACACACCGGATGAGGATAAGGGGGGACTACTGTATACACACAGATGAGGATAAGGGGGGACTACTGTATACACACCAGATGAGGATAAGGGGGACTACTGTATACACACCGGATGAGGATAAGGGGGGACTACTGTATACACACCGGATGAGGATAAGGGGGGACTACTGTATACACACCGGATGAGGATAAGGGGGGACTACTGTATACACACCGGATGAGGATAAGGGGGGACTACTGTATACACACCGGATGAGGATAAGGGGGG TR:VR 45:3 14:0 chr8 71470774 d_2017 C . Too_small_size END=71470814;SVTYPE=DEL;SVLEN=-40 TR:VR 46:11 14:0 chr9 21818239 d_2071 C . PASS END=21818299;SVTYPE=DEL;SVLEN=-60 TR:VR 35:16 9:0 chrY 9941131 r_587 G . PASS END=17064429;SVTYPE=DUP;SVLEN=7123298 TR:VR 14:5 9:0 chr1 193220128 d_206 C . PASS END=193220179;SVTYPE=DEL;SVLEN=-51 TR:VR 28:10 16:0 chr1 99492870 d_68 A . PASS END=99492917;SVTYPE=DEL;SVLEN=-47 TR:VR 36:14 17:0 chr15 26611659 d_762 C . Too_small_size END=26611695;SVTYPE=DEL;SVLEN=-36 TR:VR 34:13 11:0 chr16 2791002 d_799 G . Too_small_size END=2791044;SVTYPE=DEL;SVLEN=-42 TR:VR 74:25 11:0 chr16 76104701 d_899 C . PASS END=76104790;SVTYPE=DEL;SVLEN=-89 TR:VR 44:19 12:0 chr18 66629728 i_652 T . PASS END=66629728;SVTYPE=INS;SVINSLEN=483;SVINSSEQ=AGAAAAATAATGCCTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTATATACCCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGTGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAATTCAAAAAAAAATTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA TR:VR 22:15 14:0 chr2 113768368 r_318 G . PASS END=113893253;SVTYPE=DUP;SVLEN=124885 TR:VR 80:12 35:0 chr20 18387679 r_352 A . PASS END=18399805;SVTYPE=DEL;SVLEN=-12126 TR:VR 49:14 18:0 chr21 29630725 r_373 T . PASS END=29639494;SVTYPE=DEL;SVLEN=-8769 TR:VR 44:15 23:0 chr4 42877046 r_435 A . PASS END=42878307;SVTYPE=DUP;SVLEN=1261 TR:VR 48:4 17:0 chr4 60950152 d_1711 G . PASS END=60950563;SVTYPE=DEL;SVLEN=-411 TR:VR 38:18 12:0 chr5 46393359 d_1795 G . PASS END=46393469;SVTYPE=INS;SVINSLEN=143;SVINSSEQ=TTGAACCCTCCTTTTCATAGAGCAGTTTTGAAACAGTCACCTTTTTTTCATACAGCAGTTTTGAAACACTCTTTTTGTAGAATTTGAAAGGGGATATTTGTTTCCCTTTGTGGCAAATGTTGGAAAACAAAATATCTTCACTT TR:VR 27:10 13:0 chr6 127490282 r_486 A . PASS END=127505019;SVTYPE=DUP;SVLEN=14737;SVINSLEN=6;SVINSSEQ=AAACAC TR:VR 64:9 27:0 chr8 116743322 r_532 A . PASS END=116784768;SVTYPE=DUP;SVLEN=41446;SVINSLEN=7;SVINSSEQ=TCCAAGG TR:VR 107:7 25:0 chr9 23043356 i_1581 T . PASS END=23043360;SVTYPE=INS;SVINSLEN=51;SVINSSEQ=ATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA TR:VR 38:5 19:0 chr1 247172045 d_230 T . Too_small_size END=247172086;SVTYPE=DEL;SVLEN=-41 TR:VR 47:24 9:0 chr10 102972567 d_316 C . PASS END=102973532;SVTYPE=DEL;SVLEN=-965 TR:VR 41:15 19:0 chr11 130091292 i_231 G . PASS END=130091292;SVTYPE=INS;SVINSLEN=177;SVINSSEQ=ACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGCTGACCCCCCCCACCTCCCTCCCGCACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCACCTCCCTCCCGCA TR:VR 52:4 6:0 chr11 58820605 r_92 A . PASS END=58824772;SVTYPE=DUP;SVLEN=4167 TR:VR 48:12 16:0 chr12 130392257 i_298 C . PASS END=130392257;SVTYPE=INS;SVINSLEN=1274;SVINSSEQ=GTGTGTCTGTCAGTTACCTGGTGAATATTGAATGTTGTGAGGACCCAGTCACCGTCATCACGTGTCCGTCAGTTACCTGGTGAATATTGAATGTTGTGATGACCCGGTCACCGTCATCACGTGTCCGTCAGTTACCTGGTGAATATTGAATGTTGTGATGACCCAGGTCACCGTCATCACATGTGTCTGTCAGTTACCTGGTGAATATTGAATGTTGTGATGACCCGGTCACCGTCATCACGTGTCCGTCAGTTACCTGGTGAATATTGAATGTTGTGATGACCCGGTCACCGTCATCATGGGTCCGTCAGTTACCTGGGTGAATATTGAATGTTGTGATGACCCGGTCACCGTCATCACGTGTCTGTCAGTTACCTGGTGAATATTGAATGTTGTGAGGACCCGGTCACCGTCATCACGTGTCCGTCAGTTACCTGGTGAATATTGAATGTTTGTGAGGACCCGGTCCACCGTCATCACGTGTCCGTCAGTTACCTGGTGAATATTGAATGTTGTGATGACCGGTCTGCACCGCTGGTCACATTGTGTGCGTCAGTTACCTGGTGAATATTGAATACCAGTTGTGATGACCCGGTCACCGTCATCACGTGTCCGTCAGTTACCTGGTGAATATTGAATGTTATGAGGACCCGGTCACCGTCATCACGTGTCCGTCAGTTACCTGGTGAATATTGAATGTTGTGATGACCTGGGTCACCGTCATCACGTGTCCGTCAGTTACCTGGTGAATATTGAATGTTGTGAGGACCCGGTCACCGTCATCACGTGTGTCCGTCAGTTACCTGGTGAATATTGAATGTTGTGATTGACCCGGTCACCGTCATCACGTGTCCGTCAGTTACCTGGTGAATATTGAATGTTGTGATGACCCGGTCACCGTCATCATGTGTGTGCGTCAGTTACCTGGTGAATATTGAATGTTGTGATGACCCAGTCACCGTCATCACGTGTGTGTGTCCAATTGCCTGGTGAATAGTTGAATGTTGTGATGACCCAGTCACCGTCATCACGTGTCCGTCAGTTACCTGGTGAATATTGAATGTTGTGAGGACCCAGTCACCGTCATCACGTGTCCGTCAGTTACCTGGTGAATATTGAATGTTGTGATGACCTGGTCACCGTCATCACGTGGGTGCATCAGTTACCTGGTGAATATTGAATGTTGTGATGACCCGGTCACCGTCATCACGTGTGTCCGTCAGTTACCTGGTGAATATTGAATGTTGTGATGACCCAGTCACCGTCATCACGTG TR:VR 27:12 7:0 chr13 18299857 r_144 C . PASS END=18304146;SVTYPE=DUP;SVLEN=4289 TR:VR 36:3 13:0 chr14 19383801 i_332 A . PASS END=19383803;SVTYPE=INS;SVINSLEN=180;SVINSSEQ=AGAGGCAGACCACAGGCCATCTTGAGGAGGACTTTATGTTCAAGTGCAGAAAGCAGCCAGGATTGCCACCCTGGGAACTCGGCCTGCTGTGGTCCGCAGTGCCATACGAGCTCTGAGGCATGGACTGGTGCCATGTGCTTTATAGAAAAATTAACTTAAGATCCATTAAAGAGCTAAATG TR:VR 71:4 18:0 chr15 30811924 d_763 T . PASS END=30812151;SVTYPE=DEL;SVLEN=-227 TR:VR 46:20 12:0 chr16 28051385 d_807 T . Too_small_size END=28051429;SVTYPE=DEL;SVLEN=-44 TR:VR 24:15 19:0 chr17_KI270729v1_random 3227 i_618 C . Too_low_VAF END=3227;SVTYPE=INS;SVINSLEN=147;SVINSSEQ=TCGGGTTCCATTCCATTCTGTTGTATTCCATTCCATTCCATTCTATTCCATACCATTCCATTCCATTGCATTCCACTCGGGTTGATTCTATTCCATTCTGTTCCATTGCATTCCATTCCGCTCCGTTCCATTCCATTGCATTCCATT TR:VR 226:9 77:1 chr18 67703371 d_1024 A . Too_small_size END=67703417;SVTYPE=DEL;SVLEN=-46 TR:VR 22:17 25:0 chr2 194031127 d_1259 A . PASS END=194031189;SVTYPE=DEL;SVLEN=-62 TR:VR 42:13 16:0 chr3 20675427 d_1533 G . PASS END=20675486;SVTYPE=DEL;SVLEN=-59 TR:VR 41:17 12:0 chr6 64287372 r_482 G . PASS END=64289856;SVTYPE=DEL;SVLEN=-2484 TR:VR 34:15 13:0 chr8 118353552 d_2032 T . Too_small_size END=118353590;SVTYPE=DEL;SVLEN=-38 TR:VR 43:12 17:0 chr8 73901296 r_526 T . PASS END=74759862;SVTYPE=DUP;SVLEN=858566;SVINSLEN=1;SVINSSEQ=G TR:VR 129:24 28:0 chr9 23156572 d_2072 G . Too_small_size END=23156610;SVTYPE=DEL;SVLEN=-38 TR:VR 45:14 12:0 chr1 200455059 d_207 A . PASS END=200456599;SVTYPE=DEL;SVLEN=-1540 TR:VR 35:17 14:0 chr11 60264173 d_376 T . PASS END=60264883;SVTYPE=DEL;SVLEN=-710 TR:VR 47:22 18:0 chr16 28591958 r_223_0 A AGTTGTGTTGTTGTTGTTGTTGTTGTTGTTG]chr16:28593014] . PASS SVTYPE=BND;MATEID=r_223_1;SVINSLEN=30;SVINSSEQ=GTTGTGTTGTTGTTGTTGTTGTTGTTGTTG TR:VR 42:3 8:0 chr16 28593014 r_223_1 A ACAACAACAACAACAACAACAACAACACAAC]chr16:28591958] . PASS SVTYPE=BND;MATEID=r_223_0;SVINSLEN=30;SVINSSEQ=CAACAACAACAACAACAACAACAACACAAC TR:VR 42:3 8:0 chr16 79373423 d_900 C . PASS END=79373540;SVTYPE=DEL;SVLEN=-117 TR:VR 31:11 17:0 chr2 195947590 d_1260 A . PASS END=195948978;SVTYPE=DEL;SVLEN=-1388;SVINSLEN=3;SVINSSEQ=TCA TR:VR 38:15 15:0 chr22 12359787 d_1483 C . Too_low_VAF END=12359887;SVTYPE=INS;SVINSLEN=101;SVINSSEQ=TTGCAGTTTCTGCAAAAAGAGAGTTTCAAAACTGCTCAATCAAAAGGAAAGTTTTAACTCTGTGAGATGAATGCACAGAGCATAAGGAAGTTTCTCAGATT TR:VR 168:8 55:1 chr3 126516171 i_1103 C . PASS END=126516171;SVTYPE=INS;SVINSLEN=251;SVINSSEQ=CCCAGCACCCACCACCTAATGTCCCCCACCCCCAGTGCCCACCACCTACCCTCCCCCCACCCCCAGCACCCAACACTTACCCTCCCCCACCCCCAACACCCACCACCTACCCTCCCTTGTCCCCCAGCACCCTGACACCTACCCTCTCCGCCCCCCAATGTCACACCACCTACCCTCACTGTCTCCAAGTGCCTGTCATCTACCCTCCTCCTGTCCCCCAGCGCCTACCACCTACCCACCCCCTCCTCTTC TR:VR 81:6 13:0 chr4 62803708 d_1713 A . PASS END=62809288;SVTYPE=DEL;SVLEN=-5580;SVINSLEN=15;SVINSSEQ=CCGTGCTGTATAAAT TR:VR 33:3 14:0 chr7 157194979 r_514 A . PASS END=157233293;SVTYPE=DEL;SVLEN=-38314 TR:VR 50:13 26:0 chr8 74416801 d_2018 T . PASS END=74417581;SVTYPE=DEL;SVLEN=-780 TR:VR 79:15 20:0 chr9 23750131 d_2073 T . PASS END=23751749;SVTYPE=DEL;SVLEN=-1618 TR:VR 39:18 15:0 chr1 200891520 r_48 T . PASS END=200897144;SVTYPE=DUP;SVLEN=5624 TR:VR 58:6 21:0 chr1 2697471 d_28 A . Too_low_VAF END=2697651;SVTYPE=DEL;SVLEN=-180;SVINSLEN=19;SVINSSEQ=GCAGCACCCACACCCCCAG TR:VR 128:3 33:0 chr10 103251315 i_181 C . PASS END=103251315;SVTYPE=INS;SVINSLEN=307;SVINSSEQ=ACCATCACCACCACCACCATCACCACCACCACCACCACCATCACACCTCCACCATCACCACCACCTCCACCATCACCACCACCAACACCACCACCACCACCATCACCACCTCCACCACCATTACCACAACCACCATTGTTACCACCACCATCTACCACCACCACCATCACCATTCACCATCACCATTGTGTCACCAACATCACCACCATATCCACCATGTTTCTCCACCACCCACCGCCACCACTTTTCTACGACCACCACCACCATCTCCACATCCACCACTCGCCTCCACCAACACTACCACCAT TR:VR 45:5 12:0 chr11 131865759 i_233 A . PASS END=131865759;SVTYPE=INS;SVINSLEN=361;SVINSSEQ=CACACATACTGCCTACACACACATGCTACACACACCTCCCACACTCACACATGCTACATACACACACATGCTACACACACACACCTCCCACACTCACACATGCTACATACACACACACATGCTACACACACACACCTCCCACATTCACACATGCTACATACACACCTCCCACACTCACACATGCTACACACATACTACACACACACACCTCCCACACTCACACACATGCACACATACACATGCTACACACACACCTCCCACACTCACACATGCTACATACACACACATGCTACACACACACCTCCCCCACACTCACACATGCTACATACACACATGCTACACACACACACCTCCCACATTC TR:VR 32:3 18:0 chr14 19387228 i_334 C . PASS END=19387228;SVTYPE=INS;SVINSLEN=534;SVINSSEQ=ATGGATGGTAATTTTGGCTGCTTTCTGCACTTGAACGTAAAGTCCTCCTCAAGAAGGCCTGTGGTCCGCCTCTTGGCAACCAAGAAGCCTGCAGTACCATACGACCCGAGGCATGGACTGGAGCCCCAAAGGCAGTGCACACCCTGCTCCTGAGCTTGCTGCTTGTTTCCTCTCTGTGGCTCCATTTGTAGGACAGTTGTTGCACTGAAGCTTGTGCATGCCGGGCAAGGCCAAGCTGGCTCAAAGAGCAACCACCCACCTCTGCAAGGGTATGCCTGGAGCAGGTGCACCAGTCACCATCTAGCGGCCGGACATGGTACATCACTTCTTCTACCCTAAAGGTGGGCTACAGCACCATCTGCTTTTCCTAAGGCCACTGCTCCATCAGCAGTTAGGTGGCAGCCAAGGCAGGACAAGCTCACTCAGAGCAGCGTGTTAGTACCTGGGGCCTGTGCATGCCAGGGAGGCCGAGCTCGCTCAAAGAGCAACCAGCCACCTCTGCAAGGTCTGGCCAGGGCTACAGAAGTCCCCCCT TR:VR 69:4 19:0 chr15 33231947 r_196 C . PASS END=33247121;SVTYPE=DEL;SVLEN=-15174 TR:VR 40:8 27:0 chr16 79976074 r_240_0 T ]chr2:193624017]C . PASS SVTYPE=BND;MATEID=r_240_1 TR:VR 101:27 38:0 chr2 193624017 r_240_1 C C[chr16:79976074[ . PASS SVTYPE=BND;MATEID=r_240_0 TR:VR 101:27 38:0 chr2 115685493 r_319 A . PASS END=115700102;SVTYPE=DUP;SVLEN=14609 TR:VR 58:4 29:0 chr2 196332771 d_1261 A . PASS END=196332828;SVTYPE=DEL;SVLEN=-57 TR:VR 42:15 17:0 chr2 240568027 r_342 C . PASS END=240570094;SVTYPE=DEL;SVLEN=-2067;SVINSLEN=3;SVINSSEQ=GGT TR:VR 23:16 16:0 chr3 23106495 r_392 T . PASS END=23155623;SVTYPE=DUP;SVLEN=49128 TR:VR 74:11 32:0 chrUn_KI270757v1 67427 d_2245 A . Too_low_VAF END=67644;SVTYPE=DEL;SVLEN=-217 TR:VR 390:6 159:1 chr10 103275445 d_317 A . PASS END=103275574;SVTYPE=DEL;SVLEN=-129 TR:VR 48:15 18:0 chr11 132842015 d_392 G . PASS END=132842072;SVTYPE=DEL;SVLEN=-57 TR:VR 34:14 17:0 chr11 66096231 r_93 T . PASS END=66118508;SVTYPE=DUP;SVLEN=22277;SVINSLEN=4;SVINSSEQ=CTCC TR:VR 84:12 19:0 chr17_KI270730v1_random 104887 d_1000 T . Too_low_VAF END=104997;SVTYPE=DEL;SVLEN=-110;SVINSLEN=10;SVINSSEQ=GGAGTGGAAA TR:VR 162:7 86:1 chr2 116720758 i_822 T . PASS END=116720764;SVTYPE=INS;SVINSLEN=89;SVINSSEQ=CGCCCAAGACATGCAAGGACAAGCAAAAAACAAAATCTAACTGTCAGGACCCCATCATGAATTGGCTGTCCAACTGGCATTGGCGTTGG TR:VR 37:3 14:0 chr21 35770483 r_374 T . PASS END=35842783;SVTYPE=DUP;SVLEN=72300 TR:VR 86:14 20:0 chr4 155739706 r_450 G . PASS END=155742712;SVTYPE=DUP;SVLEN=3006 TR:VR 25:3 19:0 chr5 137010466 r_469 T . PASS END=137022529;SVTYPE=DUP;SVLEN=12063 TR:VR 32:5 20:0 chr6 131793480 d_1879 T . PASS END=131793759;SVTYPE=DEL;SVLEN=-279;SVINSLEN=1;SVINSSEQ=G TR:VR 32:8 14:0 chr8 8091763 r_515_0 A ACACAAAATTCC]chr8:12570301] . PASS SVTYPE=BND;MATEID=r_515_1;SVINSLEN=11;SVINSSEQ=CACAAAATTCC TR:VR 87:5 32:0 chr8 12570301 r_515_1 G GGGAATTTTGTG]chr8:8091763] . PASS SVTYPE=BND;MATEID=r_515_0;SVINSLEN=11;SVINSSEQ=GGAATTTTGTG TR:VR 87:5 32:0 chrX 41441019 i_1797 A . PASS END=41441019;SVTYPE=INS;SVINSLEN=610;SVINSSEQ=TTCTATATATATTCTATATATATTCTATACATATATTCTATATATAATCTATATATATATTCTATATATAATCTATATATATATTCTATATATAATCTTATATATATATATTCTATATATATTCTATATATATATTCTATATATATTCATTATCTATATTCTATATATATTCTATATATATCTTCTATATATATTCTATATATATTCTATATATATAATTATATATATATCTAATATATATTCTATATATATATTCTATATATATTCTATATATATTCTATATATATCTTACATATATTCTATATATAGATTCTATATATAGATTATATATATATTCTATATATATTCTATACATATATTCTATATATATTCTATACATATATTCTATATATATTCTATATATATTCTATATATATATTCTATATATATATTCTATATATATATTCTATATATATATTCTATATATATTCTATATATATTCTATATATTATATTCTATATATATATTCTATATATATTCTATATATATTCTATATATATATTCTATATATATTCTATATATATTCTATATATATATTCTATATATATTCTATATATATATTCTATAGAGC TR:VR 37:4 16:0 chr10 104077207 r_78_0 A A]chr2:63503914] . PASS SVTYPE=BND;MATEID=r_78_1 TR:VR 86:14 28:0 chr2 63503914 r_78_1 A A]chr10:104077207] . PASS SVTYPE=BND;MATEID=r_78_0 TR:VR 86:14 28:0 chr11 67668647 r_94_0 G ]chr13:51270128]TGTATGTATGGGTACTGTGTGTCTTTGTGTGTATGGGTGTCTGTGTGTGTCTGTGTATGTATGGGTG . PASS SVTYPE=BND;MATEID=r_94_1;SVINSLEN=66;SVINSSEQ=TGTATGTATGGGTACTGTGTGTCTTTGTGTGTATGGGTGTCTGTGTGTGTCTGTGTATGTATGGGT TR:VR 69:15 26:0 chr13 51270128 r_94_1 G GACCCATACATACACAGACACACACAGACACCCATACACACAAAGACACACAGTACCCATACATACA[chr11:67668647[ . PASS SVTYPE=BND;MATEID=r_94_0;SVINSLEN=66;SVINSSEQ=ACCCATACATACACAGACACACACAGACACCCATACACACAAAGACACACAGTACCCATACATACA TR:VR 69:15 26:0 chr16 30782250 r_224 G . PASS END=30842123;SVTYPE=DUP;SVLEN=59873 TR:VR 84:21 33:0 chr18 76843680 d_1026 G . PASS END=76843803;SVTYPE=DEL;SVLEN=-123;SVINSLEN=106;SVINSSEQ=TGGGCGGATCACGAGGTCAGGAGTTCGAGACCATCCTGACTAACACAGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGTATTTTTACTAGTATTTTAGTAG TR:VR 19:11 24:0 chr19 29512184 r_280 G . Too_small_size END=29512137;SVTYPE=INS;SVINSLEN=0;SVINSSEQ= TR:VR 55:4 21:0 chr2 198441771 r_333 G . PASS END=198465102;SVTYPE=DUP;SVLEN=23331 TR:VR 81:10 25:0 chr3 26661061 r_393 A . PASS END=27128579;SVTYPE=DUP;SVLEN=467518 TR:VR 87:13 32:0 chr4 157398535 r_451_0 T T[chr6:118676462[ . PASS SVTYPE=BND;MATEID=r_451_1 TR:VR 32:10 36:0 chr6 118676462 r_451_1 T ]chr4:157398535]T . PASS SVTYPE=BND;MATEID=r_451_0 TR:VR 32:10 36:0 chr5 142694871 d_1823 G . Too_small_size END=142694907;SVTYPE=DEL;SVLEN=-36 TR:VR 16:11 21:0 chr6 72374332 d_1867 T . PASS END=72374402;SVTYPE=DEL;SVLEN=-70;SVINSLEN=2;SVINSSEQ=TT TR:VR 20:14 11:0 chr8 119719908 r_533 A . PASS END=119812547;SVTYPE=DUP;SVLEN=92639 TR:VR 132:15 28:0 chr8 82339902 d_2019 G . PASS END=82340293;SVTYPE=DEL;SVLEN=-391 TR:VR 60:17 13:0 chrX 10324417 r_572 A . Too_low_VAF END=10448844;SVTYPE=DUP;SVLEN=124427 TR:VR 67:3 30:0 chrX 1589152 i_1752 C . Too_low_VAF END=1589152;SVTYPE=INS;SVINSLEN=226;SVINSSEQ=TTCTTTAATCCTCCCCTCCTTTCTGTATATTATTAAAAAATATAAAAGTAACATTTTTTCACACTCTCGCTGTAATCTGAATTTGCTTGCAGCTCCAAAGAAGGTTTTTAGTAATGCCCTCTCAAAGAAAACAATCTTCATAAGAAAAAAATACACTAGTTTCCTCAAAATTCACATTTTCACACATTTTTCTCTTACACAGTATTCAAAAAATCTCTTCCTGGTC TR:VR 424:6 94:1 chrX 45242984 d_2283 G . PASS END=45243542;SVTYPE=DEL;SVLEN=-558;SVINSLEN=1;SVINSSEQ=C TR:VR 45:16 16:0 chr10 104085469 r_79_0 C ]chr15:94523859]G . PASS SVTYPE=BND;MATEID=r_79_1 TR:VR 96:8 22:0 chr15 94523859 r_79_1 G G[chr10:104085469[ . PASS SVTYPE=BND;MATEID=r_79_0 TR:VR 96:8 22:0 chr14 22640009 r_158_0 A AAAAAAAAAAAAAAAAAA]chrX:131096760] . PASS SVTYPE=BND;MATEID=r_158_1;SVINSLEN=17;SVINSSEQ=AAAAAAAAAAAAAAAAA TR:VR 91:7 37:1 chrX 131096760 r_158_1 T TTTTTTTTTTTTTTTTTT]chr14:22640009] . PASS SVTYPE=BND;MATEID=r_158_0;SVINSLEN=17;SVINSSEQ=TTTTTTTTTTTTTTTTT TR:VR 91:7 37:1 chr14_GL000225v1_random 30292 r_175_0 G [chrY:11309494[C . Too_low_VAF SVTYPE=BND;MATEID=r_175_1 TR:VR 817:5 415:0 chrY 11309494 r_175_1 C [chr14_GL000225v1_random:30292[C . Too_low_VAF SVTYPE=BND;MATEID=r_175_0 TR:VR 817:5 415:0 chr15 36290863 d_766 A . PASS END=36290968;SVTYPE=DEL;SVLEN=-105 TR:VR 34:7 14:0 chr16 31233503 d_810 T . PASS END=31233621;SVTYPE=DEL;SVLEN=-118 TR:VR 40:17 12:0 chr16 81423089 d_901 A . PASS END=81426918;SVTYPE=DEL;SVLEN=-3829 TR:VR 62:16 11:0 chr2 202101046 d_1262 G . PASS END=202102150;SVTYPE=DEL;SVLEN=-1104 TR:VR 39:26 13:0 chr21 37114777 r_375_0 C C[chr8:64993826[ . PASS SVTYPE=BND;MATEID=r_375_1 TR:VR 80:18 24:0 chr8 64993826 r_375_1 A ]chr21:37114777]A . PASS SVTYPE=BND;MATEID=r_375_0 TR:VR 80:18 24:0 chr3 35363111 d_1535 C . PASS END=35363161;SVTYPE=DEL;SVLEN=-50 TR:VR 28:12 13:0 chr4 16690481 i_1216 G . Too_small_size END=16690481;SVTYPE=INS;SVINSLEN=49;SVINSSEQ=GAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAGAG TR:VR 37:4 15:0 chr4 48156207 d_1670 G . Too_small_size END=48156244;SVTYPE=DEL;SVLEN=-37 TR:VR 45:23 19:0 chr6 76550059 r_483 T . PASS END=76575165;SVTYPE=DUP;SVLEN=25106;SVINSLEN=1;SVINSSEQ=C TR:VR 41:7 25:0 chr8 121752962 d_2034 C . PASS END=121753025;SVTYPE=DEL;SVLEN=-63 TR:VR 58:13 19:0 chr8 82491464 d_2020 A . PASS END=82491538;SVTYPE=DEL;SVLEN=-74 TR:VR 51:12 16:0 chr9 31597235 d_2074 A . PASS END=31597289;SVTYPE=DEL;SVLEN=-54 TR:VR 44:14 16:0 chr1 204857589 d_208 C . PASS END=204857649;SVTYPE=DEL;SVLEN=-60 TR:VR 27:12 17:0 chr1 247918210 r_56_0 C ]chr6:64895693]G . PASS SVTYPE=BND;MATEID=r_56_1 TR:VR 58:11 30:0 chr6 64895693 r_56_1 G G[chr1:247918210[ . PASS SVTYPE=BND;MATEID=r_56_0 TR:VR 58:11 30:0 chr1 30021016 r_10 T . PASS END=30041488;SVTYPE=DUP;SVLEN=20472 TR:VR 71:10 31:0 chr10 105560904 r_80 T . PASS END=105565272;SVTYPE=DUP;SVLEN=4368 TR:VR 64:8 17:0 chr13 27860470 d_465 T . PASS END=27862593;SVTYPE=DEL;SVLEN=-2123 TR:VR 26:9 14:0 chr14 23531759 d_492 G . Too_small_size END=23531803;SVTYPE=DEL;SVLEN=-44 TR:VR 27:14 8:0 chr15 40633655 r_197 C . PASS END=40919907;SVTYPE=DUP;SVLEN=286252 TR:VR 90:16 40:0 chr16 31582672 d_811 A . PASS END=31582785;SVTYPE=DEL;SVLEN=-113 TR:VR 38:12 14:0 chr19 29898304 i_690 T . PASS END=29898311;SVTYPE=INS;SVINSLEN=51;SVINSSEQ=TATATTCTTTTAAATAAGCTATAAGTGGATTTCAGCAGGGAAAATTGGATT TR:VR 39:3 18:0 chr2 119146277 d_1237 A . PASS END=119147115;SVTYPE=DEL;SVLEN=-838 TR:VR 47:15 17:0 chr3 127611377 d_1557 C . PASS END=127611508;SVTYPE=DEL;SVLEN=-131;SVINSLEN=2;SVINSSEQ=AA TR:VR 72:16 15:0 chr3 36637213 d_1536 C . PASS END=36637299;SVTYPE=DEL;SVLEN=-86 TR:VR 47:20 17:0 chr4 166982571 d_1737 A . PASS END=166983950;SVTYPE=DEL;SVLEN=-1379 TR:VR 23:14 15:0 chr5 151130265 r_470 C . PASS END=151252878;SVTYPE=DUP;SVLEN=122613 TR:VR 91:15 38:0 chr6 134095107 d_1880 G . PASS END=134095159;SVTYPE=DEL;SVLEN=-52 TR:VR 46:13 7:0 chr6 77860603 d_1868 G . PASS END=77860650;SVTYPE=DEL;SVLEN=-47 TR:VR 27:17 22:0