Files based on variant analysis

Steps:
1. Align H898, Q903, WS77111, PG29, Se404-851 reads to Q903-v1
2. Call variants using bcftools (only on annotated scaffolds)
3. Filter variants using vcffilter, vcftools and SnpSift
4. Annotate effects of variants using SnpEff

Q903-v1.annotated_scafs.vcf.reheader.gz: Raw variants
Q903-v1.annotated_scafs.vcf.filter.H898-vars.Q903-hom-ref.H898-hom-alt.vcf: Filtered variants with annotated effects
genome.proteinsComplFinalallIsoNoStop.fasta.tsv: GO terms, interpro entries for Q903 annotation