Information for 16-KCTCTGAG (Motif 27)

C A T G G A T C G A C T A G T C G C A T T A C G G T C A C A T G
Reverse Opposite:
G T A C A C G T A T G C C G T A C T A G C T G A C T A G G T A C
p-value:1e-29
log p-value:-6.820e+01
Information Content per bp:1.579
Number of Target Sequences with motif5271.0
Percentage of Target Sequences with motif39.04%
Number of Background Sequences with motif12412.7
Percentage of Background Sequences with motif34.34%
Average Position of motif in Targets99.0 +/- 56.4bp
Average Position of motif in Background100.0 +/- 56.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.24
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TCF7L2/MA0523.1/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--KCTCTGAG----
TNCCTTTGATCTTN
 A C G T A C G T C A T G G A T C G A C T A G T C G C A T T A C G G T C A C A T G A C G T A C G T A C G T A C G T
C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:KCTCTGAG--
CCTTTGATGT
 C A T G G A T C G A C T A G T C G C A T T A C G G T C A C A T G A C G T A C G T
A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-KCTCTGAG---
NTTTCTNAGAAA
 A C G T C A T G G A T C G A C T A G T C G C A T T A C G G T C A C A T G A C G T A C G T A C G T
C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:KCTCTGAG--
CCTTTGATST
 C A T G G A T C G A C T A G T C G C A T T A C G G T C A C A T G A C G T A C G T
A T G C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----KCTCTGAG-----
ATTTCCTTTGATCTATA
 A C G T A C G T A C G T A C G T C A T G G A T C G A C T A G T C G C A T T A C G G T C A C A T G A C G T A C G T A C G T A C G T A C G T
C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

PB0082.1_Tcf3_1/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----KCTCTGAG-----
NNTTCCTTTGATCTANA
 A C G T A C G T A C G T A C G T C A T G G A T C G A C T A G T C G C A T T A C G G T C A C A T G A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A

Tcf7(HMG)/GM12878-TCF7-ChIP-Seq(Encode)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:KCTCTGAG-----
-CTTTGATGTGSB
 C A T G G A T C G A C T A G T C G C A T T A C G G T C A C A T G A C G T A C G T A C G T A C G T A C G T
A C G T A G T C G A C T A G C T C G A T A T C G G C T A C G A T A T C G C G A T A C T G T A C G A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--KCTCTGAG--
TNCCTTTGATGT
 A C G T A C G T C A T G G A T C G A C T A G T C G C A T T A C G G T C A C A T G A C G T A C G T
C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---KCTCTGAG----
AGNGTTCTAATGANN
 A C G T A C G T A C G T C A T G G A T C G A C T A G T C G C A T T A C G G T C A C A T G A C G T A C G T A C G T A C G T
G C T A T C A G T A G C C A T G C A G T C A G T G T A C A G C T G C T A G C T A A G C T T A C G C T G A A C G T C G T A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--KCTCTGAG-
AGCCACTCAAG
 A C G T A C G T C A T G G A T C G A C T A G T C G C A T T A C G G T C A C A T G A C G T
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G