Information for 19-CCAGCGTCTGGG (Motif 21)

A G T C A G T C C T G A A C T G A G T C A C T G A C G T A G T C A C G T A C T G A C T G A T C G
Reverse Opposite:
T A G C A G T C A G T C C G T A A C T G C G T A A G T C A C T G A G T C A G C T A C T G A C T G
p-value:1e-37
log p-value:-8.725e+01
Information Content per bp:1.974
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif0.19%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets99.4 +/- 57.6bp
Average Position of motif in Background143.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CCAGCGTCTGGG
-VBSYGTCTGG-
 A G T C A G T C C T G A A C T G A G T C A C T G A C G T A G T C A C G T A C T G A C T G A T C G
A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.68
Offset:3
Orientation:forward strand
Alignment:CCAGCGTCTGGG
---CTGTCTGG-
 A G T C A G T C C T G A A C T G A G T C A C T G A C G T A G T C A C G T A C T G A C T G A T C G
A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CCAGCGTCTGGG----
NNTNNTGTCTGGNNTNG
 A C G T A G T C A G T C C T G A A C T G A G T C A C T G A C G T A G T C A C G T A C T G A C T G A T C G A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:4
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CCAGCGTCTGGG--
----GGTCTGGCAT
 A G T C A G T C C T G A A C T G A G T C A C T G A C G T A G T C A C G T A C T G A C T G A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CCAGCGTCTGGG
--AACATCTGGA
 A G T C A G T C C T G A A C T G A G T C A C T G A C G T A G T C A C G T A C T G A C T G A T C G
A C G T A C G T T G C A C T G A A T G C G T C A A C G T A T G C A C G T A C T G A C T G T G C A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CCAGCGTCTGGG--
----WDNCTGGGCA
 A G T C A G T C C T G A A C T G A G T C A C T G A C G T A G T C A C G T A C T G A C T G A T C G A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

HINFP/MA0131.2/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCAGCGTCTGGG-
-CAACGTCCGCGG
 A G T C A G T C C T G A A C T G A G T C A C T G A C G T A G T C A C G T A C T G A C T G A T C G A C G T
A C G T A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CCAGCGTCTGGG
---TWGTCTGV-
 A G T C A G T C C T G A A C T G A G T C A C T G A C G T A G T C A C G T A C T G A C T G A T C G
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:9
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------CCAGCGTCTGGG
NNNNTGCCAGTGATTG--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C T G A A C T G A G T C A C T G A C G T A G T C A C G T A C T G A C T G A T C G
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CCAGCGTCTGGG
-CAGCC------
 A G T C A G T C C T G A A C T G A G T C A C T G A C G T A G T C A C G T A C T G A C T G A T C G
A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T