Information for 18-TGKAATAMAGAG (Motif 20)

A C G T A C T G A C G T C G T A C G T A A C G T C G T A G T A C C G T A A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C A C G T A C T G A C G T C G T A A C G T A C G T G T C A A G T C C G T A
p-value:1e-39
log p-value:-9.165e+01
Information Content per bp:1.931
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif0.24%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets123.1 +/- 54.8bp
Average Position of motif in Background140.8 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0187.1_Tcf7_2/Jaspar

Match Rank:1
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----TGKAATAMAGAG
NNNTTTNTAATACNG--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A C G T A A C G T C G T A G T A C C G T A A C T G C G T A A C T G
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G A C G T A C G T

HOXA10/MA0899.1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TGKAATAMAGAG
GGTAATAAAAA-
 A C G T A C T G A C G T C G T A C G T A A C G T C G T A G T A C C G T A A C T G C G T A A C T G
C T A G T C A G G A C T T G C A T C G A G C A T C G T A C G T A G T C A G T C A G T C A A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TGKAATAMAGAG
-GTCATAAAAN-
 A C G T A C T G A C G T C G T A C G T A A C G T C G T A G T A C C G T A A C T G C G T A A C T G
A C G T T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T A C G T

CDX1/MA0878.1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGKAATAMAGAG
-GCAATAAAA--
 A C G T A C T G A C G T C G T A C G T A A C G T C G T A G T A C C G T A A C T G C G T A A C T G
A C G T T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A A C G T A C G T

CDX2/MA0465.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGKAATAMAGAG
AAGCCATAAAA--
 A C G T A C G T A C T G A C G T C G T A C G T A A C G T C G T A G T A C C G T A A C T G C G T A A C T G
T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A A C G T A C G T

TEAD3(TEA)/HepG2-TEAD3-ChIP-Seq(Encode)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGKAATAMAGAG
CTGGAATGYA---
 A C G T A C G T A C T G A C G T C G T A C G T A A C G T C G T A G T A C C G T A A C T G C G T A A C T G
G T A C G A C T A C T G A C T G C G T A C G T A A C G T A C T G G A T C T C G A A C G T A C G T A C G T

Hoxd9/MA0913.1/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGKAATAMAGAG
-GCAATAAAAA-
 A C G T A C T G A C G T C G T A C G T A A C G T C G T A G T A C C G T A A C T G C G T A A C T G
A C G T T C A G G A T C T G C A C T G A C G A T G C T A G C T A G C T A C G T A G C T A A C G T

TEAD1(TEAD)/HepG2-TEAD1-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGKAATAMAGAG
TGGAATGYRG--
 A C G T A C T G A C G T C G T A C G T A A C G T C G T A G T A C C G T A A C T G C G T A A C T G
G C A T A C T G A C T G C G T A C G T A A C G T A C T G A G C T T C A G A C T G A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TGKAATAMAGAG
TCCAATCCACA-
 A C G T A C T G A C G T C G T A C G T A A C G T C G T A G T A C C G T A A C T G C G T A A C T G
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T

PH0046.1_Hoxa10/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TGKAATAMAGAG--
TAGGTAATAAAATTCA
 A C G T A C G T A C G T A C T G A C G T C G T A C G T A A C G T C G T A G T A C C G T A A C T G C G T A A C T G A C G T A C G T
C A G T G T C A A C T G T C A G G A C T G T C A C T G A G C A T C G T A C G T A G C T A G C T A G C A T C A G T G T A C C G T A