Information for 11-AAAACCAGGCCA (Motif 12)

C G T A C G T A C G T A C G T A A G T C A G T C C G T A A C T G A C T G A G T C A G T C T C G A
Reverse Opposite:
A C G T T C A G C T A G G T A C A G T C A C G T A C T G A C T G A C G T A C G T C G A T A C G T
p-value:1e-67
log p-value:-1.555e+02
Information Content per bp:1.977
Number of Target Sequences with motif53.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets82.6 +/- 48.6bp
Average Position of motif in Background81.6 +/- 41.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:AAAACCAGGCCA
----CTAGGCCT
 C G T A C G T A C G T A C G T A A G T C A G T C C G T A A C T G A C T G A G T C A G T C T C G A
A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:2
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AAAACCAGGCCA
--AAYTAGGTCA
 C G T A C G T A C G T A C G T A A G T C A G T C C G T A A C T G A C T G A G T C A G T C T C G A
A C G T A C G T G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A

RORA(var.2)/MA0072.1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AAAACCAGGCCA-
TATAAGTAGGTCAA
 A C G T C G T A C G T A C G T A C G T A A G T C A G T C C G T A A C T G A C T G A G T C A G T C T C G A A C G T
C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:AAAACCAGGCCA
----CNAGGCCT
 C G T A C G T A C G T A C G T A A G T C A G T C C G T A A C T G A C T G A G T C A G T C T C G A
A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:5
Score:0.59
Offset:4
Orientation:forward strand
Alignment:AAAACCAGGCCA--
----CAAGGHCANV
 C G T A C G T A C G T A C G T A A G T C A G T C C G T A A C T G A C T G A G T C A G T C T C G A A C G T A C G T
A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

RORA/MA0071.1/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AAAACCAGGCCA
--ATCAAGGTCA
 C G T A C G T A C G T A C G T A A G T C A G T C C G T A A C T G A C T G A G T C A G T C T C G A
A C G T A C G T C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AAAACCAGGCCA
-ATGCCAGACN-
 C G T A C G T A C G T A C G T A A G T C A G T C C G T A A C T G A C T G A G T C A G T C T C G A
A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T

Zfx/MA0146.2/Jaspar

Match Rank:8
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:AAAACCAGGCCA-------
-----CAGGCCNNGGCCNN
 C G T A C G T A C G T A C G T A A G T C A G T C C G T A A C T G A C T G A G T C A G T C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----AAAACCAGGCCA
TGACANARRCCAGRC--
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A A G T C A G T C C G T A A C T G A C T G A G T C A G T C T C G A
C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:10
Score:0.54
Offset:4
Orientation:forward strand
Alignment:AAAACCAGGCCA
----TRAGGTCA
 C G T A C G T A C G T A C G T A A G T C A G T C C G T A A C T G A C T G A G T C A G T C T C G A
A C G T A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A