Information for 8-TCTCTGTATGGC (Motif 7)

A G C T T A G C A C G T A G T C A C G T C T A G C G A T C G T A A G C T A C T G C T A G A G T C
Reverse Opposite:
A C T G A G T C G T A C C T G A A C G T C G T A A G T C C G T A A C T G T C G A A C T G C T G A
p-value:1e-158
log p-value:-3.643e+02
Information Content per bp:1.871
Number of Target Sequences with motif93.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets101.4 +/- 54.7bp
Average Position of motif in Background69.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0008.1_MADS_class/Jaspar

Match Rank:1
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TCTCTGTATGGC
-CCATATATGG-
 A G C T T A G C A C G T A G T C A C G T C T A G C G A T C G T A A G C T A C T G C T A G A G T C
A C G T G A T C A G T C G C T A C G A T C G T A C G A T C G T A G C A T C T A G C A T G A C G T

CDX2/MA0465.1/Jaspar

Match Rank:2
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TCTCTGTATGGC--
---TTTTATGGCTN
 A G C T T A G C A C G T A G T C A C G T C T A G C G A T C G T A A G C T A C T G C T A G A G T C A C G T A C G T
A C G T A C G T A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.54
Offset:3
Orientation:forward strand
Alignment:TCTCTGTATGGC
---CTGTCTGG-
 A G C T T A G C A C G T A G T C A C G T C T A G C G A T C G T A A G C T A C T G C T A G A G T C
A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:4
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TCTCTGTATGGC---
NAGTTTCABTHTGACTNW
 A C G T A C G T A C G T A G C T T A G C A C G T A G T C A C G T C T A G C G A T C G T A A G C T A C T G C T A G A G T C A C G T A C G T A C G T
A G T C C T G A A T C G A G C T A G C T G A C T A G T C G C T A A C G T C G A T G C A T C G A T A T C G C G T A T A G C G C A T A T G C C G T A

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TCTCTGTATGGC--
CTTTCANTATGACTV
 A C G T A G C T T A G C A C G T A G T C A C G T C T A G C G A T C G T A A G C T A C T G C T A G A G T C A C G T A C G T
A T G C G A C T A G C T A G C T A G T C G C T A C A G T C G A T G C T A A C G T A C T G G C T A T A G C G C A T T G A C

PH0056.1_Hoxa9/Jaspar

Match Rank:6
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TCTCTGTATGGC---
ANTAATTTTATGGCCGN
 A C G T A C G T A G C T T A G C A C G T A G T C A C G T C T A G C G A T C G T A A G C T A C T G C T A G A G T C A C G T A C G T A C G T
G C T A G A C T G C A T G C T A C G T A G C A T C G A T C G A T C G A T C G T A G A C T C A T G C T A G T A G C G A T C A C T G G A C T

PB0170.1_Sox17_2/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TCTCTGTATGGC---
NTTNTATGAATGTGNNC
 A C G T A C G T A G C T T A G C A C G T A G T C A C G T C T A G C G A T C G T A A G C T A C T G C T A G A G T C A C G T A C G T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

CDX1/MA0878.1/Jaspar

Match Rank:8
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:TCTCTGTATGGC
---TTTTATTGC
 A G C T T A G C A C G T A G T C A C G T C T A G C G A T C G T A A G C T A C T G C T A G A G T C
A C G T A C G T A C G T C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C

Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:9
Score:0.52
Offset:3
Orientation:forward strand
Alignment:TCTCTGTATGGC-
---TTTTATGGCM
 A G C T T A G C A C G T A G T C A C G T C T A G C G A T C G T A A G C T A C T G C T A G A G T C A C G T
A C G T A C G T A C G T C A G T C G A T G C A T G C A T G T C A A G C T C A T G C T A G A T G C G T A C

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:TCTCTGTATGGC
--NTTTTATGAC
 A G C T T A G C A C G T A G T C A C G T C T A G C G A T C G T A A G C T A C T G C T A G A G T C
A C G T A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C