Information for 4-CCTGTCGG (Motif 3)

T G A C A G T C C G A T C T A G A G C T G T A C T C A G C T A G
Reverse Opposite:
G A T C A G T C C A T G T C G A G A T C G C T A T C A G A C T G
p-value:1e-682
log p-value:-1.570e+03
Information Content per bp:1.608
Number of Target Sequences with motif6624.0
Percentage of Target Sequences with motif21.16%
Number of Background Sequences with motif3205.0
Percentage of Background Sequences with motif10.35%
Average Position of motif in Targets100.9 +/- 49.3bp
Average Position of motif in Background100.1 +/- 60.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CCTGTCGG
GCTGTG--
 T G A C A G T C C G A T C T A G A G C T G T A C T C A G C T A G
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T

SCRT1(Zf)/HEK293-SCRT1.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CCTGTCGG
CACCTGTTGC
 A C G T A C G T T G A C A G T C C G A T C T A G A G C T G T A C T C A G C T A G
G T A C C T G A G A T C G A T C A C G T A C T G C G A T C A G T T C A G T G A C

SNAI2/MA0745.1/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CCTGTCGG
NCACCTGTN--
 A C G T A C G T A C G T T G A C A G T C C G A T C T A G A G C T G T A C T C A G C T A G
T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:4
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----CCTGTCGG
RYHYACCTGB---
 A C G T A C G T A C G T A C G T A C G T T G A C A G T C C G A T C T A G A G C T G T A C T C A G C T A G
T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CCTGTCGG
GCTGTCAA
 T G A C A G T C C G A T C T A G A G C T G T A C T C A G C T A G
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

SCRT1/MA0743.1/Jaspar

Match Rank:6
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----CCTGTCGG--
ANCCACCTGTTGCNC
 A C G T A C G T A C G T A C G T A C G T T G A C A G T C C G A T C T A G A G C T G T A C T C A G C T A G A C G T A C G T
C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C

SCRT2/MA0744.1/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CCTGTCGG--
CCACCTGTTGCAT
 A C G T A C G T A C G T T G A C A G T C C G A T C T A G A G C T G T A C T C A G C T A G A C G T A C G T
T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T

ID4/MA0824.1/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CCTGTCGG
TACACCTGTC--
 A C G T A C G T A C G T A C G T T G A C A G T C C G A T C T A G A G C T G T A C T C A G C T A G
C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CCTGTCGG
ACTTCCTGTT--
 A C G T A C G T A C G T A C G T T G A C A G T C C G A T C T A G A G C T G T A C T C A G C T A G
T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CCTGTCGG----
ACCACTCTCGGTCAC
 A C G T A C G T A C G T T G A C A G T C C G A T C T A G A G C T G T A C T C A G C T A G A C G T A C G T A C G T A C G T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C