Information for 6-YAGRKGGCAGCA (Motif 2)

G A C T C G T A C A T G C T A G C A G T C A T G T C A G T G A C C G T A T A C G G A T C G T C A
Reverse Opposite:
C A G T C T A G A T G C G C A T A C T G A G T C G T A C G T C A G A T C G T A C G C A T C T G A
p-value:1e-2419
log p-value:-5.572e+03
Information Content per bp:1.506
Number of Target Sequences with motif1184.0
Percentage of Target Sequences with motif3.78%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets97.3 +/- 25.6bp
Average Position of motif in Background137.1 +/- 67.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hic1/MA0739.1/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:YAGRKGGCAGCA
-GGTTGGCAT--
 G A C T C G T A C A T G C T A G C A G T C A T G T C A G T G A C C G T A T A C G G A T C G T C A
A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.65
Offset:-7
Orientation:reverse strand
Alignment:-------YAGRKGGCAGCA-
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G T A C A T G C T A G C A G T C A T G T C A G T G A C C G T A T A C G G A T C G T C A A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

THAP1/MA0597.1/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:YAGRKGGCAGCA
-TNNGGGCAG--
 G A C T C G T A C A T G C T A G C A G T C A T G T C A G T G A C C G T A T A C G G A T C G T C A
A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:YAGRKGGCAGCA
-NGTGGGCAT--
 G A C T C G T A C A T G C T A G C A G T C A T G T C A G T G A C C G T A T A C G G A T C G T C A
A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:YAGRKGGCAGCA
-ARNTGACA---
 G A C T C G T A C A T G C T A G C A G T C A T G T C A G T G A C C G T A T A C G G A T C G T C A
A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:YAGRKGGCAGCA
--TGAGTCAGCA
 G A C T C G T A C A T G C T A G C A G T C A T G T C A G T G A C C G T A T A C G G A T C G T C A
A C G T A C G T G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A

POL002.1_INR/Jaspar

Match Rank:7
Score:0.61
Offset:6
Orientation:forward strand
Alignment:YAGRKGGCAGCA--
------TCAGTCTT
 G A C T C G T A C A T G C T A G C A G T C A T G T C A G T G A C C G T A T A C G G A T C G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T

CTCF/MA0139.1/Jaspar

Match Rank:8
Score:0.61
Offset:-7
Orientation:forward strand
Alignment:-------YAGRKGGCAGCA
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G T A C A T G C T A G C A G T C A T G T C A G T G A C C G T A T A C G G A T C G T C A
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

ZNF7(Zf)/HepG2-ZNF7.Flag-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----YAGRKGGCAGCA
TAYAAAAGBWGGCAG--
 A C G T A C G T A C G T A C G T A C G T G A C T C G T A C A T G C T A G C A G T C A T G T C A G T G A C C G T A T A C G G A T C G T C A
G A C T C G T A G A T C C G T A C G T A C T G A C G T A A C T G A C T G G C A T C A T G C T A G A G T C C T G A T C A G A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:10
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:YAGRKGGCAGCA----
-----GTCAGCANNTN
 G A C T C G T A C A T G C T A G C A G T C A T G T C A G T G A C C G T A T A C G G A T C G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T