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THOR

RSS Feed Category: Genome Assembly — Other products by this author
THOR, the Targeted High-throughput Ortholog Reconstructor, is a Java application designed to assemble target genomic sequence orthologs in low-coverage genomes.

Current release

No stable release available yet.

Experimental releases

Upcoming and alpha/beta/candidate releases

  • Alpha releases should only be used for testing and development.
  • Beta releases and Release Candidates are normally released for production testing, but should not be used on mission-critical sites.
  • Always install on a separate test server first, and make sure you have proper backups before installing.
THOR 1.0 (Beta release) Released 2006-08-09
First version

Project Description

Project resources

The Targeted High-throughput Ortholog Reconstructor (THOR) leverages the large amount of low-coverage whole–genome shotgun sequence read data generated for over twenty different animal species.  Using this data, THOR can rapidly and efficiently reconstruct genomic sequences orthologs in low-coverage genomes.  THOR is written in Java and runs on linux.    


Release

The current version is 1.0. 


Documentation

Refer to the README to learn about the program requirements and how to install. The README and javadoc are contained in the tar file.

Credits


Matthew Bainbridge, René Warren, An He, Mikhail Bilenky, Gordon Robertson and Steven Jones.
This project was funded in part by Genome Canada


Last modified 2008-10-01 17:06