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Software Release ABySS 1.2.7
by Shaun Jackman published Apr 15, 2011 last modified Apr 15, 2011 05:45 PM
Support using bwa or bowtie to align reads to contigs. New parameter, d, to specify the acceptable error of a distance estimate.
Located in Platforms / / ABySS / Releases
by Shaun Jackman last modified Feb 07, 2011 04:46 PM
Located in Platforms / / Releases / ABySS 1.2.6
Software Release ABySS 1.2.6
by Shaun Jackman published Feb 07, 2011 last modified Feb 07, 2011 04:44 PM
Sequence variants are popped if the two variants are at least 90% similar. Contigs that overlap by fewer than k-1 bp are found and may be merged.
Located in Platforms / / ABySS / Releases
by Shaun Jackman last modified Nov 15, 2010 03:41 PM
Located in Platforms / / Releases / ABySS 1.2.5
Software Release ABySS 1.2.5
by Shaun Jackman published Nov 15, 2010 last modified Nov 15, 2010 03:52 PM
Fix a colour-space-specific bug and a bug causing the error Assertion `fstSol.size() == 1' failed.
Located in Platforms / / ABySS / Releases
by Shaun Jackman last modified Oct 14, 2010 02:42 PM
Located in Platforms / / Releases / ABySS 1.2.4
Software Release ABySS 1.2.4
by Shaun Jackman published Oct 14, 2010
Replace gaps of Ns that span a region of ambiguous sequence with a consensus sequence of the possible sequences that fill the gap. The consensus sequence uses IUPAC-IUB ambiguity codes.
Located in Platforms / / ABySS / Releases
by Shaun Jackman last modified Sep 08, 2010 01:45 PM
Located in Platforms / / Releases / ABySS 1.2.3
Software Release ABySS 1.2.3
by Shaun Jackman published Sep 08, 2010
Fix two bugs that caused the error messages: Assertion `m_comm.receiveEmpty()' failed. and error: unexpected ID
Located in Platforms / / ABySS / Releases
by Shaun Jackman last modified Aug 25, 2010 12:27 PM
Located in Platforms / / Releases / ABySS 1.2.2