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Downloadable File Zip archive transabyss-1.5.5.zip
by Ka Ming Nip last modified Aug 02, 2016 11:13 AM
Located in Platforms / / Releases / Trans-ABySS 1.5.5
Software Release Trans-ABySS 1.5.5
by Ka Ming Nip published Aug 02, 2016
Set default shortest contig length to 100 bp. Skip blat alignments during assembly.
Located in Platforms / / Trans-ABySS / Releases
Downloadable File Zip archive transabyss-1.5.4.zip
by Ka Ming Nip last modified Jun 16, 2016 09:39 AM
Located in Platforms / / Releases / Trans-ABySS 1.5.4
Software Release Trans-ABySS 1.5.4
by Ka Ming Nip published May 09, 2016 last modified May 09, 2016 03:08 PM — filed under: , ,
Removed transabyss-analyze and its associated modules. We recommend using PAVFinder for structural variant detection.
Located in Platforms / / Trans-ABySS / Releases
Downloadable File Zip archive source code
by Ka Ming Nip last modified May 22, 2015 10:39 AM
Located in Platforms / / Releases / Trans-ABySS 1.5.3
Software Release Trans-ABySS 1.5.3
by Ka Ming Nip published May 22, 2015
A few bug-fixes; no major changes to assembly algorithms.
Located in Platforms / / Trans-ABySS / Releases
by Ka Ming Nip last modified Nov 14, 2014 04:01 PM
Located in Platforms / / Releases / Trans-ABySS 1.5.2
Software Release Trans-ABySS 1.5.2
by Ka Ming Nip published Nov 14, 2014
Simplify the installation of required softwares. Less temporary disk space usage in assembly. New options, bugfixes, and improvements.
Located in Platforms / / Trans-ABySS / Releases
Downloadable File Zip archive transabyss-1.5.1.zip
by Ka Ming Nip last modified Jul 22, 2014 11:46 AM
Located in Platforms / / Releases / Trans-ABySS 1.5.1
Software Release Trans-ABySS 1.5.1
by Ka Ming Nip published Jul 22, 2014 — filed under: , ,
Support strand-specific RNAseq data. Major improvement in assembly quality; both rare and common transcripts can be assembled well with "small" k-mer sizes (ie. 25~32).
Located in Platforms / / Trans-ABySS / Releases