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Downloadable File Zip archive transabyss-1.5.5.zip
by kmnip last modified Aug 02, 2016 11:13 AM
Located in Platforms / / Releases / Trans-ABySS 1.5.5
Software Release Trans-ABySS 1.5.5
by kmnip published Aug 02, 2016
Set default shortest contig length to 100 bp. Skip blat alignments during assembly.
Located in Platforms / / Trans-ABySS / Releases
Downloadable File Zip archive transabyss-1.5.4.zip
by kmnip last modified Jun 16, 2016 09:39 AM
Located in Platforms / / Releases / Trans-ABySS 1.5.4
Software Release Trans-ABySS 1.5.4
by kmnip published May 09, 2016 last modified May 09, 2016 03:08 PM — filed under: , ,
Removed transabyss-analyze and its associated modules. We recommend using PAVFinder for structural variant detection.
Located in Platforms / / Trans-ABySS / Releases
Downloadable File Zip archive source code
by kmnip last modified May 22, 2015 10:39 AM
Located in Platforms / / Releases / Trans-ABySS 1.5.3
Software Release Trans-ABySS 1.5.3
by kmnip published May 22, 2015
A few bug-fixes; no major changes to assembly algorithms.
Located in Platforms / / Trans-ABySS / Releases
by kmnip last modified Nov 14, 2014 04:01 PM
Located in Platforms / / Releases / Trans-ABySS 1.5.2
Software Release Trans-ABySS 1.5.2
by kmnip published Nov 14, 2014
Simplify the installation of required softwares. Less temporary disk space usage in assembly. New options, bugfixes, and improvements.
Located in Platforms / / Trans-ABySS / Releases
Downloadable File Zip archive transabyss-1.5.1.zip
by kmnip last modified Jul 22, 2014 11:46 AM
Located in Platforms / / Releases / Trans-ABySS 1.5.1
Software Release Trans-ABySS 1.5.1
by kmnip published Jul 22, 2014 — filed under: , ,
Support strand-specific RNAseq data. Major improvement in assembly quality; both rare and common transcripts can be assembled well with "small" k-mer sizes (ie. 25~32).
Located in Platforms / / Trans-ABySS / Releases