TASR

Targeted Assembly of Sequence Reads

Current release
TASR 1.4

Released Sep 12, 2012

Ability to interrogate sequence reads in bam files
More about this release…

Download file Get TASR for all platforms (31.2 kB)
tasr_v1.4-tar.gz

Project Description

TASR is a genomics application that allows hypothesis-based interrogation of genomic regions (sequence targets) of interest.  It only considers reads for assembly that have overlap potential to input sequence targets.

TASR is implemented in PERL and runs on any platform where PERL is installed.

 

Citation: Warren RL, Holt RA (2011) Targeted Assembly of Short Sequence Reads. PLoS ONE 6(5): e19816. doi:10.1371/journal.pone.0019816