SSAKE 3.4 (Apr 14, 2009)

Version 3.4 exploits paired-end reads to explore possible contig merges within scaffolds and allows users to track read position and individual base coverage for reads *fully embedded* within contigs.

For additional information about this project, please visit the overview page .

Available downloads

ssake_v3-4-tar.gz

For all platforms (2.2 MB)

Release Notes

State Final release
License GPL
Release Manager Rene Warren

Version 3.4 exploits paired-end reads to explore possible contig merges within scaffolds (contigs of length >= -z bases, ordered sequentially within scaffolds and overlapping by -m bases or more)

This release also fixes a bug in PET routine found in previous version and fixes minor issues related to singlets output.

Using this release, users can now track read position and individual base coverage for reads *fully embedded* within contigs, using the -c option.