PASsiT

Post Alignment SNV Tools

Project Description

PASsiT

With single nucleotide variations (SNVs) being identified in ever increasing numbers with next generation sequencing data, we are often interested in a breakdown of the effect of the mutations, and if a particular change is somatic or germline. We are also interested in high quality true positive mutations, which are increasingly important considering their use in clinical decisions. PASsiT is a suite of tools developed to help us address these needs in our high-throughput sequencing and analysis environment.

Tools include:

  • SNVannotator
  • LOH
  • score_snps

  • See poster presented at RECOMB 2011 for more details:
    http://www.bcgsc.ca/downloads/passit/PASsiT.pdf


    Yaron Butterfield
    Richard Corbett

    Current Release
    PASsiT 1.0

    Released Apr 01, 2011

    First release of PASsiT tools set.
    More about this release…

    Download file Get PASsiT for Linux
    PASsiT 1.0

    All Releases

    Version Released Description Compatibility Licenses Status
    1.0 Apr 01, 2011 First release of PASsiT tools set. More about this release… AFL final
    Project Resources

    Project owner: Yaron Butterfield