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Projects in category Illumina Solexa

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Illumina Solexa Sequencing and Analysis.

The available projects in this category, alphabetized.

Adapter Trimming for Small RNA Sequencing

Removes 3' adapter from Illumina sequencing of small RNAs where read length is greater than the size of RNAs.

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FindPeaks

Please Note: FindPeaks is now being maintained as part of the open source Vancouver Short Read Analysis Package Project at SourceForge - Please go to http://vancouvershortr.sourceforge.net/ for the project's new web page. ***

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MiRNA Profiling

Profile the content of a miRNA sequencing run.

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Novel miRNA detection

Identification of novel miRNA genes

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Slider

Maximum use of probability information for alignment of short sequence reads and SNP detection.

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SliderII

High quality SNP calling using Illumina data at minimal coverage

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XpressAlign: FPGA Short Read Aligner

A short DNA read aligner which runs on FPGA hardware.

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