Projects in category Research Application
« Back to project overviewGeneral tool for genomic research.
The available projects in this category, alphabetized.
ABySS-Explorer
A sequence assembly visualization tool
Adapter Trimming for Small RNA Sequencing
Removes 3' adapter from Illumina sequencing of small RNAs where read length is greater than the size of RNAs.
Circos
Visualize comparative genomic data such as alignments, conservation, homology, synteny and other positional n-tuples in an attractive and informative circular layout.
DiscoverySpace
DiscoverySpace is a graphical software application that intends to free the biologist from the micro-level, syntactic detail of the underlying data structures to concentrate on the "big picture" and the meaning of experimental results. Originally designed to support SAGE gene expression analysis, DiscoverySpace is particularly aimed at the non-technical biologist who wishes to utilize high-thoughput bioinformatic techniques without the learning curve associated with scripting languages and database queries.
SNVMix
Detecting single nucleotide variants from next generation sequencing data.
Sockeye
Genome visualization application.
Spark
An interactive cluster visualization tool
Trans-ABySS
Analyze ABySS multi-k-assembled shotgun transcriptome data.
