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Adapter Trimming for Small RNA Sequencing

Removes 3' adapter from Illumina sequencing of small RNAs where read length is greater than the size of RNAs.

Project Description

Given the adapter sequence used in an Illumina sequence run, looks for as much of the adapter sequence as possible at the 3' end of each read using fuzzy string matching and returns the read with the 3' adapter sequence trimmed off. Also returns a summary report listing the number of reads of each length after adapter trimming.

All Releases

Version Released Description Compatibility Licenses Status
0.3.2 Mar 28, 2011 First public release. More about this release… AFL final
Project Resources

Project owner: Andy Chu