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You are here: Home Platforms Bioinformatics GSC Software Centre ABySS Releases ABySS 1.1.1

ABySS 1.1.1 (Jan 19, 2010)

ABySS

Pop complex bubbles either completely or not at all. Choose better (typically lower) default values for the parameters e and c.

For additional information about this project, please visit the overview page .

Available downloads

Source

For all platforms (256 kB)

Release Notes

State Final release
License AFL

2010-01-19 Shaun Jackman <sjackman@bcgsc.ca>

* Release version 1.1.1.

ABYSS:
* Pop complex bubbles either completely or not at all. Bubble
popping now completes in a single round.
* Choose better (typically lower) default values for the
parameters -e,--erode and -c,--coverage. The default threshold is
the square root of the median k-mer coverage.