GSC Software Centre
Currently listing 33 projects with 92 releases.
Bioinformatic Software, Scripts and Tools
Lastest GSC Software Releases
ABySS 1.3.2
Released on Dec 13, 2011
Assembly By Short Sequences - a de novo, parallel, paired-end sequence assembler
New in this release: Improve distance estimates between contigs, enable scaffolding by default, and remove small shim contigs that don't add useful sequence to the assembly. The ...
ABySS-Explorer 1.3.0
Released on Nov 28, 2011
A sequence assembly visualization tool
New in this release: Version 1.3.0 is compatible with assemblies generated from ABySS 1.3.0 or above. In addition to visualizing ABySS assemblies as graphs, it also displays ...
Anchor 0.3.1
Released on Nov 01, 2011
Post-processing tools for de novo assemblies
New in this release: Compatibility with ABySS 1.3.1
ABySS 1.3.1
Released on Oct 24, 2011
Assembly By Short Sequences - a de novo, parallel, paired-end sequence assembler
New in this release: Fix a bug in KAligner and fix a compiler error for Mac OS X.
Anchor 0.3.0 (Release candidate)
Released on Oct 04, 2011
Post-processing tools for de novo assemblies
New in this release: Re-write of Anchor to correspond to ABySS 1.3.0
ABySS 1.3.0
Released on Sep 09, 2011
Assembly By Short Sequences - a de novo, parallel, paired-end sequence assembler
New in this release: Mate-pair data can be used to scaffold contigs. Specify your mate-pair libraries using the `mp' parameter of abyss-pe.
BLISS 0.7
Released on Aug 10, 2011
Batch anaLysIS Suite (BLISS)
New in this release: This version includes some hover-over features to allow inspection of the data during runtime.
BLISS 0.6
Released on Jul 06, 2011
Batch anaLysIS Suite (BLISS)
New in this release: This release includes a GUI for accessing the functionality of the BLISS Matlab scripts.
MiRNA Profiling 0.2.6
Released on Jun 22, 2011
Profile the content of a miRNA sequencing run.
New in this release: This release includes many usability enhancements, refer to CHANGELOG for full set of changes. Note that reporting of crossmapped reads differ between v0.2.6 ...
BLISS 0.4.1
Released on Jun 10, 2011
Batch anaLysIS Suite (BLISS)
New in this release: minor documentation updates.
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