Summary page for comparison: 'OLG01_TIC_vs_OLG03_PRI' (HS0709_vs_HS1084) - Project: Oligo


Download complete candidate list as tab delimited text file: OLG01_TIC_vs_OLG03_PRI.txt


Summary of Differential (DE) and Alternative Expression (AE) for all gene loci:

Total Candidate Genes: 9,960 (of 49,867 possible genes)

DE Genes: 4,010

AE Genes: 7,460

Alternative Exon Usage (EU) Genes: 6,182

Alernative Exon Skipping (ES) Genes: 1,283

Alternative Exon Boundary (AB) Genes: 3,876

Intron Retention (IR) Genes: 631

Cryptic Exon (CE) Genes: 951


Candidate Differential AND Alternative Expression Genes

The following table lists candidate genes ranked according to 'Score'. Only the top 250 genes appear in each list. For a complete list download the results file provided above. To appear in this list, a 'candidate gene' must be differentially expressed at the gene level (DE) or contain at least one alternatively expressed (AE) feature. The 'Score' is based on the fold change as well as other factors for AE events (multiple features supporting the same event, reciprocity, etc.). The 'Event Type' indicates whether the gene was differentially expressed ('DE') or alternatively expressed 'AE'. 'Direction' refers to the direction (+ve/-ve) of the fold change. 'Gain' (+ve) indicates higher expression in library A than library B and vice versa. 'FC' stands for fold change. '# AE Events' is the number of significant alternative expression events observed for each gene. 'AE Codes' refers to various alternative expression subtypes (listed above). The 'Top Feature' is the most significant AE event observed for an AE gene. 'Adjacency' refers to the number of consecutive AE features (potentially supporting the same isoform). 'Adjacency %' refers to the percent of all AE events for a gene that were adjacent to each other.


RankOverall
Rank
ScoreNameGene
Type
Trans.
Count
Exon
Count
Event
Type
DirectionFC# AE
Events
AE CodesTop FeatureAdjacency
%
1114.95AASS'protein_coding'739AELoss-392.838EU AB IR CE E24_Dc0.00
2214.27ST3GAL5'protein_coding'1535AELoss-229.245EU AB E17_Aa0
3314.11MSH5'protein_coding'2878AELoss-483.6830EU ES AB IR E15a_E16a27.27
4413.61C19orf29'protein_coding'422AELoss-326.5111EU AB E4_Aa50.00
5513.55AC133435.2'lincRNA'12AELoss-2586.033EU AB E1a_E2a0
6613.48GTPBP5'protein_coding'1330AELoss-438.2112EU AB E3_Db28.57
7713.41PANK1'protein_coding'720AELoss-106.934EU AB E4_Da100.00
8813.40RPS29'protein_coding'24AEGain175.433EU ES E2a_E3a100.00
9913.28AIFM1'protein_coding'624AELoss-227.313EU AB E11_Aa0.00
101013.17FARP1'protein_coding'839AELoss-276.984ES AB E20_Aa0
111113.08RP1-12G14.4'pseudogene'22AELoss-2594.512AB E1_Ab0
121213.03AC007216.1'pseudogene'13AELoss-357.525EU AB E2a_E3a0.00
131312.96FAM73A'protein_coding'422AELoss-145.8912EU AB E10f_E11a28.57
141412.84FAM116A'protein_coding'938AELoss-268.693EU AB E21_Ab0
151512.21DHX34'protein_coding'633AELoss-239.303EU AB E15_Aa0
161612.10MAP2K2'protein_coding'826AELoss-179.834EU AB E7a_E7c50.00
171712.08MRPS18B'protein_coding'513AELoss-102.365EU AB E2_Dd33.33
181812.06ARMC10'protein_coding'1024AELoss-110.6312EU ES AB CE E9_Aa50.00
191912.03RWDD2B'protein_coding'718AELoss-112.615EU AB E2_Da50.00
202012.01RPS10'protein_coding'714AEGain87.156EU ES E4a_E5a40.00
212111.94AP000692.1'processed_transcript'12AELoss-777.683EU AB E1a_E2a0
222211.93ZNF283'protein_coding'942AELoss-214.9811EU ES AB CE E17_Db0.00
232311.79SLC25A17'protein_coding'1644AELoss-137.895EU AB E3_Da0
242411.72AC034193.2'lincRNA'12AELoss-131.414AB IR E1_Da0
252511.63AC096663.2'pseudogene'24AELoss-213.423EU AB E1_Da0
262611.56DOCK4'protein_coding'2187AELoss-145.156EU AB E51_Aa0.00
272711.50C7orf46'protein_coding'821AELoss-205.014EU AB E3_Da100.00
282811.49AC128648.1'protein_coding'18AELoss-745.765EU AB E2a_E3a0.00
292911.26MORC2'protein_coding'638AELoss-121.345EU ES AB E2_Da50.00
303011.21SLC25A15'protein_coding'720AELoss-136.263EU AB E9_Aa0
313111.19DHTKD1'protein_coding'627AELoss-127.083EU AB E16_Db0.00
323211.06CHCHD2'protein_coding'26AELoss-167.314EU AB E1_Ab100.00
333311.05PHACTR4'protein_coding'729AELoss-145.549EU ES AB E19_Dc16.67
343411.03SLC27A1'protein_coding'418AELoss-25.9612EU AB CE E8_Aa16.67
353511.01ACTA2'protein_coding'717AELoss-69.022EU AB E4_Db0
363610.90C21orf58'protein_coding'1331AELoss-101.335EU AB E9_Dd0.00
373710.89AC007620.1'processed_transcript'12AELoss-65.402EU AB E1_Da0
383810.87RPS25'protein_coding'15AEGain48.035EU E2a_E3a75.00
393910.78NMNAT1'protein_coding'615AELoss-66.0413EU ES AB ENST0000046268677.78
404010.78MMADHC'protein_coding'621AELoss-116.214EU AB E8_Da0
414110.77FIS1'protein_coding'919AELoss-558.994EU ES AB E5_Aa50.00
424210.73LIMK1'protein_coding'931AELoss-108.496EU ES AB E16_Aa0.00
434310.71ELK4'protein_coding'38AELoss-70.211AB E2_Da0
444410.70RETSAT'protein_coding'1030AELoss-42.507EU AB E6_Da100.00
454510.66FTSJ2'protein_coding'614AELoss-46.184EU AB E5_Da100.00
464610.62TAPBPL'protein_coding'218AELoss-111.556EU AB E14a_E15a0.00
474710.62RANBP2'protein_coding'1149AELoss-116.534EU AB E13_Dc0.00
484810.61AKT2'protein_coding'2672AELoss-73.4523EU ES AB CE E9_Aa0.00
494910.51AC007308.1'processed_transcript'12AELoss-117.712EU AB E1a_E2a0
505010.47AC138409.3'protein_coding'28AELoss-99.867EU AB E5a_E6a33.33
515110.39PHC3'protein_coding'2459AELoss-94.429EU ES AB E6_Da0.00
525210.37C10orf18'protein_coding'1239AELoss-87.888EU AB E23_Db33.33
535310.34TMEM104'protein_coding'213AELoss-67.402EU AB E3_Da0
545410.27SNORA72'lincRNA'12AELoss-99.921AB E1_Da0
555510.26CROCCL1'processed_transcript'420AELoss-103.675EU ES AB E11_Db0.00
565610.18RPL13A'protein_coding'1235AEGain51.629EU AB E2c_E2e33.33
575710.16POLR2B'protein_coding'1347AELoss-52.204EU AB IR E3_Ab100.00
585810.14LDHA'protein_coding'1237AELoss-44.416EU AB E10_Aa0.00
595910.08VGLL4'protein_coding'1843AELoss-56.0513EU ES AB E10_Aa25.00
606010.07GBA'protein_coding'1746AELoss-84.8113EU AB E5_Aa40.00
616110.02MED24'protein_coding'1350AELoss-98.6410EU AB E2_Aa62.50
62629.98SLC2A11'protein_coding'3070AELoss-93.3911EU ES AB E13_Df0.00
63639.97TAF13'protein_coding'27AELoss-51.978EU AB IR E5_Aa33.33
64649.96C17orf45'protein_coding'2044AELoss-137.0626EU AB ER2j55.56
65659.96PLD3'protein_coding'1542AELoss-79.078EU AB IR E12_Aa0
66669.87PDHB'protein_coding'1034AELoss-60.608EU AB E1_Dg40.00
67679.87ANO10'protein_coding'1952AELoss-59.998EU AB E4_Ab0.00
68689.86IDE'protein_coding'844AELoss-44.356EU AB E5_Da0.00
69699.83PRPF3'protein_coding'829AELoss-380.242AB E14_Aa0
70709.80NUDT1'protein_coding'1320AELoss-57.113EU ES AB E4_Da100.00
71719.72EIF2B3'protein_coding'1131AELoss-63.609EU ES AB E8_Db0.00
72729.72GNL3L'protein_coding'530AELoss-77.588EU AB E19e_E19d25.00
73739.68SNRNP25'protein_coding'719AELoss-73.644EU AB E2_Aa0.00
74749.68NDUFS2'protein_coding'1545AELoss-49.138EU ES AB E13_Aa33.33
75759.67TMEM111'protein_coding'517AELoss-69.992AB E2_Aa0
76769.66HNRNPA1'protein_coding'314AEGain52.827EU E2a_E3a33.33
77779.62C22orf25'protein_coding'2757AELoss-59.6619EU ES AB E6_Db50.00
78789.60C1orf151'protein_coding'1128AELoss-53.5412EU AB IR E3_Aa0.00
79799.59CBS'protein_coding'1848AELoss-50.176EU ES AB E4_Aa0.00
80809.59AL035420.2'lincRNA'12AEGain80.812EU AB ER2a0
81819.51SEPT2'protein_coding'47102AELoss-390.433EU AB E12_Da0
82829.50MLLT6'protein_coding'1038AELoss-286.622ES AB E13_Db0
83839.49CYB561D1'protein_coding'815AELoss-244.502AB E2_Db0
84849.49KIAA1704'protein_coding'824AELoss-68.968EU AB E13_Aa0.00
85859.49RPS3A'protein_coding'16AEGain253.368EU ES ER2a71.43
86869.46ZNF730'protein_coding'15AELoss-70.781AB E5_Aa0
87879.45HDLBP'protein_coding'50143AELoss-68.1818EU ES AB E16b_E16b22.22
88889.43CXorf57'protein_coding'726AELoss-61.953AB E9_Aa0
89899.40AGRN'protein_coding'1054AELoss-49.945EU ES AB E25_Aa50.00
90909.40PARP1'protein_coding'1042AELoss-62.527EU AB ER24c33.33
91919.34EEF1A1'protein_coding'1131AEGain61.5215EU AB ER4g36.36
92929.33AC004540.1'processed_transcript'822AELoss-25.5213EU AB IR E6_Da50.00
93939.32POLR3H'protein_coding'1026AELoss-105.544EU AB E3_Db100.00
94949.31CNOT10'protein_coding'1952AELoss-213.0814EU ES AB E21_Ab16.67
95959.26RPL37'protein_coding'28AEGain40.815EU ER3a50.00
96969.22STK38L'protein_coding'114AELoss-37.686CE I1_AR50
97979.21DHX40'protein_coding'325AELoss-69.066EU AB E10_Aa0.00
98989.18IDH1'protein_coding'1338AELoss-30.447EU ES AB CE E2_Aa50.00
99999.17RAB7A'protein_coding'1026AELoss-65.9813EU AB E5b_E5c16.67
1001009.17NHP2L1'protein_coding'1022AELoss-30.754EU AB E8_Dc100.00
1011019.14C7orf44'protein_coding'2047AELoss-159.2614EU ES AB IR E11_Df12.50
1021029.14MLL3'protein_coding'1899AELoss-215.7617EU AB IR CE E62a_E63a0.00
1031039.13HBEGF'protein_coding'310AELoss-161.001AB E5_Aa0
1041049.12C4orf36'protein_coding'313AELoss-63.043AB E9_Dc0
1051059.08PTPRZ1'protein_coding'1255AELoss-174.9814EU ES AB E16_Ad22.22
1061069.05HMGN1'protein_coding'2146AELoss-58.2518EU AB ER5j33.33
1071079.05RPL7A'protein_coding'1127AELoss-457.538EU AB E2_Ab25.00
1081089.02ALG3'protein_coding'1638AELoss-30.415EU AB E5_Df50.00
1091098.99RNF121'protein_coding'418AELoss-36.703EU ES AB E4_Aa0.00
1101108.98RABGEF1'protein_coding'1028AELoss-49.5811EU AB CE E9a_E10a0.00
1111118.97MAP3K7IP2'protein_coding'619AELoss-144.793ES AB E5_Aa0
1121128.97PDIA3'protein_coding'622AELoss-42.184ES AB E1a_E4a0
1131138.96CYP20A1'protein_coding'1443AELoss-100.8710EU ES AB CE E7a_E10a66.67
1141148.96LZTS2'protein_coding'923AELoss-21.767EU AB E7_Aa0.00
1151158.93ARIH2'protein_coding'3576AELoss-54.7041EU ES AB E5_Dd50.00
1161168.91HMGB1'protein_coding'1227AELoss-180.2621EU ES AB IR E6b_E7b55.56
1171178.90CDC16'protein_coding'1237AELoss-51.365EU AB E18_Aa66.67
1181188.90TNR'protein_coding'627DELoss-477.090N/ATNRN/A
1191198.84AC133555.1'protein_coding'14AELoss-216.044EU AB E3a_E4a0.00
1201208.84NOP14'protein_coding'323AELoss-32.642EU AB E19_Aa0
1211218.80CCNL2'protein_coding'2158AELoss-31.563EU AB E9_Da0
1221228.79AC024075.1'lincRNA'12AELoss-150.492AB E1_Da0
1231238.77SON'protein_coding'2558AELoss-44.378EU AB IR E3_Da0.00
1241248.74HEATR3'protein_coding'620AELoss-40.244EU AB E13_Ab0.00
1251258.74RPS9'protein_coding'1323AELoss-154.535EU ES ER1h75.00
1261268.74AC026271.1'processed_transcript'210AELoss-43.642AB E8_Aa0
1271278.73C9orf80'protein_coding'720AELoss-128.7011EU AB E3_Db20.00
1281288.72H6PD'protein_coding'27AELoss-136.633EU AB E5_Ac0
1291298.69HLA-C'protein_coding'1227AELoss-48.7810EU ES AB E1_Ak50.00
1301308.67TRIM22'protein_coding'1233AELoss-27.476EU AB E9_Da50.00
1311318.67ZNF3'protein_coding'1639AELoss-50.0916EU AB E4_Dc18.18
1321328.67TOP3A'protein_coding'835AELoss-24.355EU AB E19_Db100.00
1331338.66PDHA1'protein_coding'1234AELoss-21.275EU ES AB E11_Aa33.33
1341348.65AL590714.1'protein_coding'15AELoss-60.357EU AB IR CE E1a_E2a100.00
1351358.63RAB3GAP2'protein_coding'1155AELoss-30.207EU AB CE E37_Aa50.00
1361368.62KDELC2'protein_coding'311AELoss-26.852AB E7_Da0
1371378.62GPR17'protein_coding'713DELoss-393.550N/AGPR17N/A
1381388.62POLM'protein_coding'2049AELoss-35.254EU AB E6_Ab50.00
1391398.61AC087742.1'lincRNA'16AELoss-147.8810EU AB IR CE E1a_E2a100.00
1401408.61EIF4G3'protein_coding'1663AELoss-51.5911EU ES AB CE E4_Aa33.33
1411418.60AC121253.1'protein_coding'46AELoss-51.864EU AB E1_Dd0
1421428.59LAMP1'protein_coding'516AELoss-47.726EU AB E4a_E5a0.00
1431438.58SEPT7'protein_coding'1433AELoss-26.955EU ES AB E1b_E5a33.33
1441448.57KLHDC8A'protein_coding'414AELoss-12.264EU AB E9_Da0.00
1451458.55POLR2H'protein_coding'1433AELoss-38.615EU AB E6_Aa0.00
1461468.53CD46'protein_coding'2736AELoss-40.249EU AB E5_Ae50.00
1471478.49MATN2'protein_coding'322AELoss-8.6413EU ES AB IR I13_AR20.00
1481488.48ANXA7'protein_coding'521AELoss-41.494EU AB E15_Da0.00
1491498.47ING4'protein_coding'2346AELoss-208.336EU AB E4_Aa50.00
1501508.46ACSS2'protein_coding'2770AELoss-35.249EU AB IR E9_Aa0
1511518.43IPP'protein_coding'517AELoss-26.605ES AB E11_Aa0
1521528.42ABHD14A'protein_coding'1140AELoss-160.132AB E5_Ab0
1531538.40SAR1B'protein_coding'414AELoss-37.053EU AB E2_Da0
1541548.37AL354696.3'lincRNA'12AELoss-123.292AB E1_Da0
1551558.35CYBRD1'protein_coding'716AELoss-25.245EU AB E4_Aa0
1561568.33AL671710.1'lincRNA'15AELoss-21.753EU ES E1a_E5a100.00
1571578.32RPL9'protein_coding'312AEGain25.2412EU AB E3a_E4a66.67
1581588.31AFG3L1'processed_transcript'1841AELoss-123.735EU AB E2_Dc0.00
1591598.30AIMP2'protein_coding'412AELoss-39.412EU AB E3_Aa0
1601608.29XIST'processed_transcript'820DELoss-314.010N/AXISTN/A
1611618.29RP5-826L7.1'processed_transcript'12AELoss-110.173EU AB E2_Aa0
1621628.28TMEM14C'protein_coding'514AELoss-31.984EU AB E4a_E4b0.00
1631638.25MGST3'protein_coding'1431AELoss-38.0510EU AB E1_Ag20.00
1641648.23SEC63'protein_coding'1244AELoss-42.579EU ES AB E11_Aa0.00
1651658.22AC073940.1'pseudogene'12AELoss-140.963EU AB E2_Aa0
1661668.21AC138951.4'pseudogene'12AELoss-53.323EU AB E2_Aa100.00
1671678.21AC010323.2'lincRNA'12AELoss-128.733EU AB E1a_E2a0
1681688.21AKR1B1'protein_coding'1641AELoss-142.947EU AB E5_Ab66.67
1691698.21NGDN'protein_coding'313AELoss-36.032EU E5a_E6a0.00
1701708.20MSH6'protein_coding'822AELoss-33.292AB E5_Da0
1711718.19THOC7'protein_coding'822AELoss-43.452AB E2_Aa0
1721728.19PCDHGC5'protein_coding'69AELoss-94.805EU ES AB E5a_E7a100.00
1731738.18MANEAL'protein_coding'49AELoss-32.753EU AB E4_Dc0
1741748.17AP002770.2'lincRNA'13AELoss-29.371AB E2_Da0
1751758.17ZNF791'protein_coding'410AELoss-26.193EU AB E5_Dd0
1761768.15AC013283.2'lincRNA'12AELoss-37.544EU AB IR E1_Da0
1771778.14CKS1B'protein_coding'715AELoss-20.691AB E4_Aa0
1781788.14MTRF1'protein_coding'1133AELoss-38.045EU ES AB E6_Da50.00
1791798.12OGT'protein_coding'1246AELoss-104.8612EU ES AB E4_Da40.00
1801808.11WDR32'protein_coding'514AELoss-35.996EU AB E8_Db33.33
1811818.11AC007390.4'protein_coding'718AELoss-24.855EU AB E7_Ad50.00
1821828.10HLA-B'protein_coding'1029AELoss-37.5413EU ES AB E1f_E1o28.57
1831838.09AL691432.1'lincRNA'14AELoss-108.445EU AB E3_Aa0
1841848.08GFAP'protein_coding'411DELoss-271.132EU GFAP0.00
1851858.08CC2D1A'protein_coding'535AELoss-29.793AB E24_Aa0
1861868.07TRIM33'protein_coding'727AELoss-92.987EU AB E16_Db0.00
1871878.04HNRNPC'protein_coding'818AELoss-36.6010EU ES AB E2_Da20.00
1881888.04AC130686.3'protein_coding'517AELoss-18.6617EU AB IR ENST0000046509766.67
1891898.01CDC42'protein_coding'717AELoss-20.673EU ES AB E3_Da0.00
1901908.00BMS1P1'pseudogene'316AELoss-88.226EU AB E9_Aa75.00
1911917.99ZNRF3'protein_coding'416AELoss-40.053AB E5_Aa0
1921927.97MCFD2'protein_coding'1733AELoss-28.4612EU AB E6_Da33.33
1931937.92DHDDS'protein_coding'1630AELoss-22.824EU AB E8_Da0.00
1941947.88MRPL48'protein_coding'313AELoss-13.435EU ES AB E6_Aa100.00
1951957.87STRBP'protein_coding'1042AELoss-113.816EU AB E2_Aa50.00
1961967.86HK1'protein_coding'2460AELoss-24.147EU AB E6_Aa0.00
1971977.84SUPT16H'protein_coding'126AELoss-24.892EU E16a_E17a0.00
1981987.83RP11-179H18.3'processed_transcript'12AELoss-111.071AB E1_Da0
1991997.83USP33'protein_coding'1040AELoss-24.189EU ES AB CE E2_Ab20.00
2002007.82AC004086.1'protein_coding'28AELoss-144.435EU E2a_E3a50.00
2012017.82PON2'protein_coding'1645AELoss-20.115EU AB E5_Dc0
2022027.81FOXN2'protein_coding'414AELoss-23.113EU AB E3a_E3c0.00
2032037.79NDUFB5'protein_coding'1640AELoss-27.6219EU ES AB E7_Aa66.67
2042047.79AC010733.5'processed_transcript'12AELoss-81.082AB E2_Aa0
2052057.79ARFGAP3'protein_coding'1228AELoss-27.235EU AB E2_Da0.00
2062067.78HLA-A'protein_coding'926AELoss-24.855EU AB E6b_E6b0.00
2072077.77CRTC2'protein_coding'933AELoss-130.676EU ES AB E8_Aa33.33
2082087.76RAB5A'protein_coding'1028AELoss-25.861AB E2_Da0
2092097.74TRAPPC2'protein_coding'819AELoss-74.898EU ES AB E5a_E5b50.00
2102107.72FAT3'protein_coding'534AELoss-3.946EU AB E3_Aa100.00
2112117.72VCAN'protein_coding'518AELoss-178.813EU CE E13a_E14a0.00
2122127.72CCNL1'protein_coding'2662AELoss-18.8931EU ES AB IR E4o_E4q16.67
2132137.71CIDECP'processed_transcript'713AELoss-30.722EU AB E4_Aa0
2142147.70ZNF425'protein_coding'512AELoss-93.443EU AB E5_Ab0
2152157.70AL136180.1'protein_coding'12AELoss-75.891AB E2_Aa0
2162167.69MDM2'protein_coding'2236AELoss-26.695EU AB ER14c50.00
2172177.69AC018633.1'pseudogene'226AELoss-31.5710EU AB E18_Aa0.00
2182187.69ZYX'protein_coding'1234AELoss-5.448EU AB E1_Ad50.00
2192197.67PDDC1'protein_coding'619AELoss-122.015EU AB ENST000004653130.00
2202207.67DCUN1D2'protein_coding'1229AELoss-30.261AB E10_Db0
2212217.65SPP1'protein_coding'411AELoss-10.005EU AB E6_Da100.00
2222227.65CNN3'protein_coding'617AELoss-30.211AB E3_Aa0
2232237.65CTD-2124B20.1'protein_coding'23AELoss-33.483AB E1_Da0
2242247.64PSIP1'protein_coding'1134AELoss-77.346EU AB CE E9a_E10a33.33
2252257.64AC009065.2'lincRNA'12AELoss-87.575EU AB IR E1a_E2a0
2262267.64MOV10'protein_coding'2066AELoss-26.8918EU ES AB E4_Da41.67
2272277.64WISP1'protein_coding'45DEGain199.010N/AWISP1N/A
2282287.63TMEM218'protein_coding'27AELoss-19.965EU AB CE E2_Aa0
2292297.63ZC3H11A'protein_coding'1243AELoss-27.808EU AB E5a_E6a0.00
2302307.63KIAA0090'protein_coding'1656AELoss-33.0610EU AB E20_Aa0.00
2312317.63BAX'protein_coding'610AELoss-15.441AB E5_Da0
2322327.62DISP1'protein_coding'418AELoss-69.892EU AB E3_Da0
2332337.60AMT'protein_coding'2554AELoss-27.164EU AB E2_Aa0
2342347.60AC079316.2'lincRNA'12AELoss-20.822AB E2_Aa0
2352357.59FAM45A'protein_coding'1130AELoss-27.0013EU ES AB E12_Aa12.50
2362367.59RPS27'protein_coding'410AELoss-83.404EU E2b_E3a0.00
2372377.59AC004019.3'processed_transcript'14AELoss-17.861AB E2_Da0
2382387.57GMPPA'protein_coding'1442AEGain12.1345EU AB IR E3a_E3c48.15
2392397.56RPP14'protein_coding'1334AELoss-22.2713EU ES AB ENST000004620460.00
2402407.56EIF4A2'protein_coding'2961AELoss-25.3816EU AB E2_Dg30.00
2412417.55AC063943.3'lincRNA'13AELoss-67.492AB E3_Aa0
2422427.54C1orf61'protein_coding'2757AELoss-20.3429EU ES AB IR E10_Dh46.67
2432437.53RINT1'protein_coding'832AELoss-19.1110EU ES AB IR E5_Aa100.00
2442447.52TOR1AIP2'protein_coding'616AELoss-28.465EU ES AB E4_Aa0.00
2452457.52SNUPN'protein_coding'412AELoss-71.631AB E2_Aa0
2462467.50USP4'protein_coding'1448AELoss-18.696EU ES AB E19_Da0.00
2472477.50PKD1'protein_coding'26115AELoss-171.5725EU ES AB IR E28_Db14.29
2482487.49TAPBP'protein_coding'1329AELoss-66.247EU AB E4_Aa33.33
2492497.49CD74'protein_coding'310DELoss-179.430N/ACD74N/A
2502507.48CD24L4'protein_coding'11DELoss-178.550N/ACD24L4N/A
2512517.47PLA2G6'protein_coding'3584AELoss-22.8328EU ES AB IR CE E15_Da41.67


Candidate Alternative Expression Genes

The following table lists candidate genes ranked according to 'Score'. Only the top 250 genes appear in each list. For a complete list download the results file provided above. To appear in this list, a 'candidate gene' must be differentially expressed at the gene level (DE) or contain at least one alternatively expressed (AE) feature. The 'Score' is based on the fold change as well as other factors for AE events (multiple features supporting the same event, reciprocity, etc.). The 'Event Type' indicates whether the gene was differentially expressed ('DE') or alternatively expressed 'AE'. 'Direction' refers to the direction (+ve/-ve) of the fold change. 'Gain' (+ve) indicates higher expression in library A than library B and vice versa. 'FC' stands for fold change. '# AE Events' is the number of significant alternative expression events observed for each gene. 'AE Codes' refers to various alternative expression subtypes (listed above). The 'Top Feature' is the most significant AE event observed for an AE gene. 'Adjacency' refers to the number of consecutive AE features (potentially supporting the same isoform). 'Adjacency %' refers to the percent of all AE events for a gene that were adjacent to each other.


RankOverall
Rank
ScoreNameGene
Type
Trans.
Count
Exon
Count
Event
Type
DirectionFC# AE
Events
AE CodesTop FeatureAdjacency
%
1114.95AASS'protein_coding'739AELoss-392.838EU AB IR CE E24_Dc0.00
2214.27ST3GAL5'protein_coding'1535AELoss-229.245EU AB E17_Aa0
3314.11MSH5'protein_coding'2878AELoss-483.6830EU ES AB IR E15a_E16a27.27
4413.61C19orf29'protein_coding'422AELoss-326.5111EU AB E4_Aa50.00
5513.55AC133435.2'lincRNA'12AELoss-2586.033EU AB E1a_E2a0
6613.48GTPBP5'protein_coding'1330AELoss-438.2112EU AB E3_Db28.57
7713.41PANK1'protein_coding'720AELoss-106.934EU AB E4_Da100.00
8813.40RPS29'protein_coding'24AEGain175.433EU ES E2a_E3a100.00
9913.28AIFM1'protein_coding'624AELoss-227.313EU AB E11_Aa0.00
101013.17FARP1'protein_coding'839AELoss-276.984ES AB E20_Aa0
111113.08RP1-12G14.4'pseudogene'22AELoss-2594.512AB E1_Ab0
121213.03AC007216.1'pseudogene'13AELoss-357.525EU AB E2a_E3a0.00
131312.96FAM73A'protein_coding'422AELoss-145.8912EU AB E10f_E11a28.57
141412.84FAM116A'protein_coding'938AELoss-268.693EU AB E21_Ab0
151512.21DHX34'protein_coding'633AELoss-239.303EU AB E15_Aa0
161612.10MAP2K2'protein_coding'826AELoss-179.834EU AB E7a_E7c50.00
171712.08MRPS18B'protein_coding'513AELoss-102.365EU AB E2_Dd33.33
181812.06ARMC10'protein_coding'1024AELoss-110.6312EU ES AB CE E9_Aa50.00
191912.03RWDD2B'protein_coding'718AELoss-112.615EU AB E2_Da50.00
202012.01RPS10'protein_coding'714AEGain87.156EU ES E4a_E5a40.00
212111.94AP000692.1'processed_transcript'12AELoss-777.683EU AB E1a_E2a0
222211.93ZNF283'protein_coding'942AELoss-214.9811EU ES AB CE E17_Db0.00
232311.79SLC25A17'protein_coding'1644AELoss-137.895EU AB E3_Da0
242411.72AC034193.2'lincRNA'12AELoss-131.414AB IR E1_Da0
252511.63AC096663.2'pseudogene'24AELoss-213.423EU AB E1_Da0
262611.56DOCK4'protein_coding'2187AELoss-145.156EU AB E51_Aa0.00
272711.50C7orf46'protein_coding'821AELoss-205.014EU AB E3_Da100.00
282811.49AC128648.1'protein_coding'18AELoss-745.765EU AB E2a_E3a0.00
292911.26MORC2'protein_coding'638AELoss-121.345EU ES AB E2_Da50.00
303011.21SLC25A15'protein_coding'720AELoss-136.263EU AB E9_Aa0
313111.19DHTKD1'protein_coding'627AELoss-127.083EU AB E16_Db0.00
323211.06CHCHD2'protein_coding'26AELoss-167.314EU AB E1_Ab100.00
333311.05PHACTR4'protein_coding'729AELoss-145.549EU ES AB E19_Dc16.67
343411.03SLC27A1'protein_coding'418AELoss-25.9612EU AB CE E8_Aa16.67
353511.01ACTA2'protein_coding'717AELoss-69.022EU AB E4_Db0
363610.90C21orf58'protein_coding'1331AELoss-101.335EU AB E9_Dd0.00
373710.89AC007620.1'processed_transcript'12AELoss-65.402EU AB E1_Da0
383810.87RPS25'protein_coding'15AEGain48.035EU E2a_E3a75.00
393910.78NMNAT1'protein_coding'615AELoss-66.0413EU ES AB ENST0000046268677.78
404010.78MMADHC'protein_coding'621AELoss-116.214EU AB E8_Da0
414110.77FIS1'protein_coding'919AELoss-558.994EU ES AB E5_Aa50.00
424210.73LIMK1'protein_coding'931AELoss-108.496EU ES AB E16_Aa0.00
434310.71ELK4'protein_coding'38AELoss-70.211AB E2_Da0
444410.70RETSAT'protein_coding'1030AELoss-42.507EU AB E6_Da100.00
454510.66FTSJ2'protein_coding'614AELoss-46.184EU AB E5_Da100.00
464610.62TAPBPL'protein_coding'218AELoss-111.556EU AB E14a_E15a0.00
474710.62RANBP2'protein_coding'1149AELoss-116.534EU AB E13_Dc0.00
484810.61AKT2'protein_coding'2672AELoss-73.4523EU ES AB CE E9_Aa0.00
494910.51AC007308.1'processed_transcript'12AELoss-117.712EU AB E1a_E2a0
505010.47AC138409.3'protein_coding'28AELoss-99.867EU AB E5a_E6a33.33
515110.39PHC3'protein_coding'2459AELoss-94.429EU ES AB E6_Da0.00
525210.37C10orf18'protein_coding'1239AELoss-87.888EU AB E23_Db33.33
535310.34TMEM104'protein_coding'213AELoss-67.402EU AB E3_Da0
545410.27SNORA72'lincRNA'12AELoss-99.921AB E1_Da0
555510.26CROCCL1'processed_transcript'420AELoss-103.675EU ES AB E11_Db0.00
565610.18RPL13A'protein_coding'1235AEGain51.629EU AB E2c_E2e33.33
575710.16POLR2B'protein_coding'1347AELoss-52.204EU AB IR E3_Ab100.00
585810.14LDHA'protein_coding'1237AELoss-44.416EU AB E10_Aa0.00
595910.08VGLL4'protein_coding'1843AELoss-56.0513EU ES AB E10_Aa25.00
606010.07GBA'protein_coding'1746AELoss-84.8113EU AB E5_Aa40.00
616110.02MED24'protein_coding'1350AELoss-98.6410EU AB E2_Aa62.50
62629.98SLC2A11'protein_coding'3070AELoss-93.3911EU ES AB E13_Df0.00
63639.97TAF13'protein_coding'27AELoss-51.978EU AB IR E5_Aa33.33
64649.96C17orf45'protein_coding'2044AELoss-137.0626EU AB ER2j55.56
65659.96PLD3'protein_coding'1542AELoss-79.078EU AB IR E12_Aa0
66669.87PDHB'protein_coding'1034AELoss-60.608EU AB E1_Dg40.00
67679.87ANO10'protein_coding'1952AELoss-59.998EU AB E4_Ab0.00
68689.86IDE'protein_coding'844AELoss-44.356EU AB E5_Da0.00
69699.83PRPF3'protein_coding'829AELoss-380.242AB E14_Aa0
70709.80NUDT1'protein_coding'1320AELoss-57.113EU ES AB E4_Da100.00
71719.72EIF2B3'protein_coding'1131AELoss-63.609EU ES AB E8_Db0.00
72729.72GNL3L'protein_coding'530AELoss-77.588EU AB E19e_E19d25.00
73739.68SNRNP25'protein_coding'719AELoss-73.644EU AB E2_Aa0.00
74749.68NDUFS2'protein_coding'1545AELoss-49.138EU ES AB E13_Aa33.33
75759.67TMEM111'protein_coding'517AELoss-69.992AB E2_Aa0
76769.66HNRNPA1'protein_coding'314AEGain52.827EU E2a_E3a33.33
77779.62C22orf25'protein_coding'2757AELoss-59.6619EU ES AB E6_Db50.00
78789.60C1orf151'protein_coding'1128AELoss-53.5412EU AB IR E3_Aa0.00
79799.59CBS'protein_coding'1848AELoss-50.176EU ES AB E4_Aa0.00
80809.59AL035420.2'lincRNA'12AEGain80.812EU AB ER2a0
81819.51SEPT2'protein_coding'47102AELoss-390.433EU AB E12_Da0
82829.50MLLT6'protein_coding'1038AELoss-286.622ES AB E13_Db0
83839.49CYB561D1'protein_coding'815AELoss-244.502AB E2_Db0
84849.49KIAA1704'protein_coding'824AELoss-68.968EU AB E13_Aa0.00
85859.49RPS3A'protein_coding'16AEGain253.368EU ES ER2a71.43
86869.46ZNF730'protein_coding'15AELoss-70.781AB E5_Aa0
87879.45HDLBP'protein_coding'50143AELoss-68.1818EU ES AB E16b_E16b22.22
88889.43CXorf57'protein_coding'726AELoss-61.953AB E9_Aa0
89899.40AGRN'protein_coding'1054AELoss-49.945EU ES AB E25_Aa50.00
90909.40PARP1'protein_coding'1042AELoss-62.527EU AB ER24c33.33
91919.34EEF1A1'protein_coding'1131AEGain61.5215EU AB ER4g36.36
92929.33AC004540.1'processed_transcript'822AELoss-25.5213EU AB IR E6_Da50.00
93939.32POLR3H'protein_coding'1026AELoss-105.544EU AB E3_Db100.00
94949.31CNOT10'protein_coding'1952AELoss-213.0814EU ES AB E21_Ab16.67
95959.26RPL37'protein_coding'28AEGain40.815EU ER3a50.00
96969.22STK38L'protein_coding'114AELoss-37.686CE I1_AR50
97979.21DHX40'protein_coding'325AELoss-69.066EU AB E10_Aa0.00
98989.18IDH1'protein_coding'1338AELoss-30.447EU ES AB CE E2_Aa50.00
99999.17RAB7A'protein_coding'1026AELoss-65.9813EU AB E5b_E5c16.67
1001009.17NHP2L1'protein_coding'1022AELoss-30.754EU AB E8_Dc100.00
1011019.14C7orf44'protein_coding'2047AELoss-159.2614EU ES AB IR E11_Df12.50
1021029.14MLL3'protein_coding'1899AELoss-215.7617EU AB IR CE E62a_E63a0.00
1031039.13HBEGF'protein_coding'310AELoss-161.001AB E5_Aa0
1041049.12C4orf36'protein_coding'313AELoss-63.043AB E9_Dc0
1051059.08PTPRZ1'protein_coding'1255AELoss-174.9814EU ES AB E16_Ad22.22
1061069.05HMGN1'protein_coding'2146AELoss-58.2518EU AB ER5j33.33
1071079.05RPL7A'protein_coding'1127AELoss-457.538EU AB E2_Ab25.00
1081089.02ALG3'protein_coding'1638AELoss-30.415EU AB E5_Df50.00
1091098.99RNF121'protein_coding'418AELoss-36.703EU ES AB E4_Aa0.00
1101108.98RABGEF1'protein_coding'1028AELoss-49.5811EU AB CE E9a_E10a0.00
1111118.97MAP3K7IP2'protein_coding'619AELoss-144.793ES AB E5_Aa0
1121128.97PDIA3'protein_coding'622AELoss-42.184ES AB E1a_E4a0
1131138.96CYP20A1'protein_coding'1443AELoss-100.8710EU ES AB CE E7a_E10a66.67
1141148.96LZTS2'protein_coding'923AELoss-21.767EU AB E7_Aa0.00
1151158.93ARIH2'protein_coding'3576AELoss-54.7041EU ES AB E5_Dd50.00
1161168.91HMGB1'protein_coding'1227AELoss-180.2621EU ES AB IR E6b_E7b55.56
1171178.90CDC16'protein_coding'1237AELoss-51.365EU AB E18_Aa66.67
1181198.84AC133555.1'protein_coding'14AELoss-216.044EU AB E3a_E4a0.00
1191208.84NOP14'protein_coding'323AELoss-32.642EU AB E19_Aa0
1201218.80CCNL2'protein_coding'2158AELoss-31.563EU AB E9_Da0
1211228.79AC024075.1'lincRNA'12AELoss-150.492AB E1_Da0
1221238.77SON'protein_coding'2558AELoss-44.378EU AB IR E3_Da0.00
1231248.74HEATR3'protein_coding'620AELoss-40.244EU AB E13_Ab0.00
1241258.74RPS9'protein_coding'1323AELoss-154.535EU ES ER1h75.00
1251268.74AC026271.1'processed_transcript'210AELoss-43.642AB E8_Aa0
1261278.73C9orf80'protein_coding'720AELoss-128.7011EU AB E3_Db20.00
1271288.72H6PD'protein_coding'27AELoss-136.633EU AB E5_Ac0
1281298.69HLA-C'protein_coding'1227AELoss-48.7810EU ES AB E1_Ak50.00
1291308.67TRIM22'protein_coding'1233AELoss-27.476EU AB E9_Da50.00
1301318.67ZNF3'protein_coding'1639AELoss-50.0916EU AB E4_Dc18.18
1311328.67TOP3A'protein_coding'835AELoss-24.355EU AB E19_Db100.00
1321338.66PDHA1'protein_coding'1234AELoss-21.275EU ES AB E11_Aa33.33
1331348.65AL590714.1'protein_coding'15AELoss-60.357EU AB IR CE E1a_E2a100.00
1341358.63RAB3GAP2'protein_coding'1155AELoss-30.207EU AB CE E37_Aa50.00
1351368.62KDELC2'protein_coding'311AELoss-26.852AB E7_Da0
1361388.62POLM'protein_coding'2049AELoss-35.254EU AB E6_Ab50.00
1371398.61AC087742.1'lincRNA'16AELoss-147.8810EU AB IR CE E1a_E2a100.00
1381408.61EIF4G3'protein_coding'1663AELoss-51.5911EU ES AB CE E4_Aa33.33
1391418.60AC121253.1'protein_coding'46AELoss-51.864EU AB E1_Dd0
1401428.59LAMP1'protein_coding'516AELoss-47.726EU AB E4a_E5a0.00
1411438.58SEPT7'protein_coding'1433AELoss-26.955EU ES AB E1b_E5a33.33
1421448.57KLHDC8A'protein_coding'414AELoss-12.264EU AB E9_Da0.00
1431458.55POLR2H'protein_coding'1433AELoss-38.615EU AB E6_Aa0.00
1441468.53CD46'protein_coding'2736AELoss-40.249EU AB E5_Ae50.00
1451478.49MATN2'protein_coding'322AELoss-8.6413EU ES AB IR I13_AR20.00
1461488.48ANXA7'protein_coding'521AELoss-41.494EU AB E15_Da0.00
1471498.47ING4'protein_coding'2346AELoss-208.336EU AB E4_Aa50.00
1481508.46ACSS2'protein_coding'2770AELoss-35.249EU AB IR E9_Aa0
1491518.43IPP'protein_coding'517AELoss-26.605ES AB E11_Aa0
1501528.42ABHD14A'protein_coding'1140AELoss-160.132AB E5_Ab0
1511538.40SAR1B'protein_coding'414AELoss-37.053EU AB E2_Da0
1521548.37AL354696.3'lincRNA'12AELoss-123.292AB E1_Da0
1531558.35CYBRD1'protein_coding'716AELoss-25.245EU AB E4_Aa0
1541568.33AL671710.1'lincRNA'15AELoss-21.753EU ES E1a_E5a100.00
1551578.32RPL9'protein_coding'312AEGain25.2412EU AB E3a_E4a66.67
1561588.31AFG3L1'processed_transcript'1841AELoss-123.735EU AB E2_Dc0.00
1571598.30AIMP2'protein_coding'412AELoss-39.412EU AB E3_Aa0
1581618.29RP5-826L7.1'processed_transcript'12AELoss-110.173EU AB E2_Aa0
1591628.28TMEM14C'protein_coding'514AELoss-31.984EU AB E4a_E4b0.00
1601638.25MGST3'protein_coding'1431AELoss-38.0510EU AB E1_Ag20.00
1611648.23SEC63'protein_coding'1244AELoss-42.579EU ES AB E11_Aa0.00
1621658.22AC073940.1'pseudogene'12AELoss-140.963EU AB E2_Aa0
1631668.21AC138951.4'pseudogene'12AELoss-53.323EU AB E2_Aa100.00
1641678.21AC010323.2'lincRNA'12AELoss-128.733EU AB E1a_E2a0
1651688.21AKR1B1'protein_coding'1641AELoss-142.947EU AB E5_Ab66.67
1661698.21NGDN'protein_coding'313AELoss-36.032EU E5a_E6a0.00
1671708.20MSH6'protein_coding'822AELoss-33.292AB E5_Da0
1681718.19THOC7'protein_coding'822AELoss-43.452AB E2_Aa0
1691728.19PCDHGC5'protein_coding'69AELoss-94.805EU ES AB E5a_E7a100.00
1701738.18MANEAL'protein_coding'49AELoss-32.753EU AB E4_Dc0
1711748.17AP002770.2'lincRNA'13AELoss-29.371AB E2_Da0
1721758.17ZNF791'protein_coding'410AELoss-26.193EU AB E5_Dd0
1731768.15AC013283.2'lincRNA'12AELoss-37.544EU AB IR E1_Da0
1741778.14CKS1B'protein_coding'715AELoss-20.691AB E4_Aa0
1751788.14MTRF1'protein_coding'1133AELoss-38.045EU ES AB E6_Da50.00
1761798.12OGT'protein_coding'1246AELoss-104.8612EU ES AB E4_Da40.00
1771808.11WDR32'protein_coding'514AELoss-35.996EU AB E8_Db33.33
1781818.11AC007390.4'protein_coding'718AELoss-24.855EU AB E7_Ad50.00
1791828.10HLA-B'protein_coding'1029AELoss-37.5413EU ES AB E1f_E1o28.57
1801838.09AL691432.1'lincRNA'14AELoss-108.445EU AB E3_Aa0
1811848.08GFAP'protein_coding'411DELoss-271.132EU GFAP0.00
1821858.08CC2D1A'protein_coding'535AELoss-29.793AB E24_Aa0
1831868.07TRIM33'protein_coding'727AELoss-92.987EU AB E16_Db0.00
1841878.04HNRNPC'protein_coding'818AELoss-36.6010EU ES AB E2_Da20.00
1851888.04AC130686.3'protein_coding'517AELoss-18.6617EU AB IR ENST0000046509766.67
1861898.01CDC42'protein_coding'717AELoss-20.673EU ES AB E3_Da0.00
1871908.00BMS1P1'pseudogene'316AELoss-88.226EU AB E9_Aa75.00
1881917.99ZNRF3'protein_coding'416AELoss-40.053AB E5_Aa0
1891927.97MCFD2'protein_coding'1733AELoss-28.4612EU AB E6_Da33.33
1901937.92DHDDS'protein_coding'1630AELoss-22.824EU AB E8_Da0.00
1911947.88MRPL48'protein_coding'313AELoss-13.435EU ES AB E6_Aa100.00
1921957.87STRBP'protein_coding'1042AELoss-113.816EU AB E2_Aa50.00
1931967.86HK1'protein_coding'2460AELoss-24.147EU AB E6_Aa0.00
1941977.84SUPT16H'protein_coding'126AELoss-24.892EU E16a_E17a0.00
1951987.83RP11-179H18.3'processed_transcript'12AELoss-111.071AB E1_Da0
1961997.83USP33'protein_coding'1040AELoss-24.189EU ES AB CE E2_Ab20.00
1972007.82AC004086.1'protein_coding'28AELoss-144.435EU E2a_E3a50.00
1982017.82PON2'protein_coding'1645AELoss-20.115EU AB E5_Dc0
1992027.81FOXN2'protein_coding'414AELoss-23.113EU AB E3a_E3c0.00
2002037.79NDUFB5'protein_coding'1640AELoss-27.6219EU ES AB E7_Aa66.67
2012047.79AC010733.5'processed_transcript'12AELoss-81.082AB E2_Aa0
2022057.79ARFGAP3'protein_coding'1228AELoss-27.235EU AB E2_Da0.00
2032067.78HLA-A'protein_coding'926AELoss-24.855EU AB E6b_E6b0.00
2042077.77CRTC2'protein_coding'933AELoss-130.676EU ES AB E8_Aa33.33
2052087.76RAB5A'protein_coding'1028AELoss-25.861AB E2_Da0
2062097.74TRAPPC2'protein_coding'819AELoss-74.898EU ES AB E5a_E5b50.00
2072107.72FAT3'protein_coding'534AELoss-3.946EU AB E3_Aa100.00
2082117.72VCAN'protein_coding'518AELoss-178.813EU CE E13a_E14a0.00
2092127.72CCNL1'protein_coding'2662AELoss-18.8931EU ES AB IR E4o_E4q16.67
2102137.71CIDECP'processed_transcript'713AELoss-30.722EU AB E4_Aa0
2112147.70ZNF425'protein_coding'512AELoss-93.443EU AB E5_Ab0
2122157.70AL136180.1'protein_coding'12AELoss-75.891AB E2_Aa0
2132167.69MDM2'protein_coding'2236AELoss-26.695EU AB ER14c50.00
2142177.69AC018633.1'pseudogene'226AELoss-31.5710EU AB E18_Aa0.00
2152187.69ZYX'protein_coding'1234AELoss-5.448EU AB E1_Ad50.00
2162197.67PDDC1'protein_coding'619AELoss-122.015EU AB ENST000004653130.00
2172207.67DCUN1D2'protein_coding'1229AELoss-30.261AB E10_Db0
2182217.65SPP1'protein_coding'411AELoss-10.005EU AB E6_Da100.00
2192227.65CNN3'protein_coding'617AELoss-30.211AB E3_Aa0
2202237.65CTD-2124B20.1'protein_coding'23AELoss-33.483AB E1_Da0
2212247.64PSIP1'protein_coding'1134AELoss-77.346EU AB CE E9a_E10a33.33
2222257.64AC009065.2'lincRNA'12AELoss-87.575EU AB IR E1a_E2a0
2232267.64MOV10'protein_coding'2066AELoss-26.8918EU ES AB E4_Da41.67
2242287.63TMEM218'protein_coding'27AELoss-19.965EU AB CE E2_Aa0
2252297.63ZC3H11A'protein_coding'1243AELoss-27.808EU AB E5a_E6a0.00
2262307.63KIAA0090'protein_coding'1656AELoss-33.0610EU AB E20_Aa0.00
2272317.63BAX'protein_coding'610AELoss-15.441AB E5_Da0
2282327.62DISP1'protein_coding'418AELoss-69.892EU AB E3_Da0
2292337.60AMT'protein_coding'2554AELoss-27.164EU AB E2_Aa0
2302347.60AC079316.2'lincRNA'12AELoss-20.822AB E2_Aa0
2312357.59FAM45A'protein_coding'1130AELoss-27.0013EU ES AB E12_Aa12.50
2322367.59RPS27'protein_coding'410AELoss-83.404EU E2b_E3a0.00
2332377.59AC004019.3'processed_transcript'14AELoss-17.861AB E2_Da0
2342387.57GMPPA'protein_coding'1442AEGain12.1345EU AB IR E3a_E3c48.15
2352397.56RPP14'protein_coding'1334AELoss-22.2713EU ES AB ENST000004620460.00
2362407.56EIF4A2'protein_coding'2961AELoss-25.3816EU AB E2_Dg30.00
2372417.55AC063943.3'lincRNA'13AELoss-67.492AB E3_Aa0
2382427.54C1orf61'protein_coding'2757AELoss-20.3429EU ES AB IR E10_Dh46.67
2392437.53RINT1'protein_coding'832AELoss-19.1110EU ES AB IR E5_Aa100.00
2402447.52TOR1AIP2'protein_coding'616AELoss-28.465EU ES AB E4_Aa0.00
2412457.52SNUPN'protein_coding'412AELoss-71.631AB E2_Aa0
2422467.50USP4'protein_coding'1448AELoss-18.696EU ES AB E19_Da0.00
2432477.50PKD1'protein_coding'26115AELoss-171.5725EU ES AB IR E28_Db14.29
2442487.49TAPBP'protein_coding'1329AELoss-66.247EU AB E4_Aa33.33
2452517.47PLA2G6'protein_coding'3584AELoss-22.8328EU ES AB IR CE E15_Da41.67
2462527.47ZNF789'protein_coding'1532AELoss-92.913EU AB E7_Da0
2472537.46GGCT'protein_coding'1020AELoss-18.0710EU AB E4_Aa66.67
2482557.43FUT10'protein_coding'410AELoss-15.771AB E4_Db0
2492567.42GFPT1'protein_coding'530AELoss-26.263EU AB E3_Da0
2502577.41XPO1'protein_coding'3188AELoss-22.9417EU AB E6_Aa30.00
2512587.41GEFT'protein_coding'830AELoss-18.711AB E13_Ab0


Candidate Differential and Alternative Expression Genes (Gain ONLY)

The following table lists candidate genes ranked according to 'Score'. Only the top 250 genes appear in each list. For a complete list download the results file provided above. To appear in this list, a 'candidate gene' must be differentially expressed at the gene level (DE) or contain at least one alternatively expressed (AE) feature. The 'Score' is based on the fold change as well as other factors for AE events (multiple features supporting the same event, reciprocity, etc.). The 'Event Type' indicates whether the gene was differentially expressed ('DE') or alternatively expressed 'AE'. 'Direction' refers to the direction (+ve/-ve) of the fold change. 'Gain' (+ve) indicates higher expression in library A than library B and vice versa. 'FC' stands for fold change. '# AE Events' is the number of significant alternative expression events observed for each gene. 'AE Codes' refers to various alternative expression subtypes (listed above). The 'Top Feature' is the most significant AE event observed for an AE gene. 'Adjacency' refers to the number of consecutive AE features (potentially supporting the same isoform). 'Adjacency %' refers to the percent of all AE events for a gene that were adjacent to each other.


RankOverall
Rank
ScoreNameGene
Type
Trans.
Count
Exon
Count
Event
Type
DirectionFC# AE
Events
AE CodesTop FeatureAdjacency
%
1813.40RPS29'protein_coding'24AEGain175.433EU ES E2a_E3a100.00
22012.01RPS10'protein_coding'714AEGain87.156EU ES E4a_E5a40.00
33810.87RPS25'protein_coding'15AEGain48.035EU E2a_E3a75.00
45610.18RPL13A'protein_coding'1235AEGain51.629EU AB E2c_E2e33.33
5769.66HNRNPA1'protein_coding'314AEGain52.827EU E2a_E3a33.33
6809.59AL035420.2'lincRNA'12AEGain80.812EU AB ER2a0
7859.49RPS3A'protein_coding'16AEGain253.368EU ES ER2a71.43
8919.34EEF1A1'protein_coding'1131AEGain61.5215EU AB ER4g36.36
9959.26RPL37'protein_coding'28AEGain40.815EU ER3a50.00
101578.32RPL9'protein_coding'312AEGain25.2412EU AB E3a_E4a66.67
112277.64WISP1'protein_coding'45DEGain199.010N/AWISP1N/A
122387.57GMPPA'protein_coding'1442AEGain12.1345EU AB IR E3a_E3c48.15
132757.25MFAP4'protein_coding'38DEGain151.790N/AMFAP4N/A
142877.18TUBA1B'protein_coding'26AEGain116.493EU AB E4_Da0.00
153027.12RPS27A'protein_coding'1129AEGain14.579EU AB ER3i28.57
163157.06TSC22D4'protein_coding'617AEGain6.6312EU AB CE I1_AR262.50
173197.05BX322613.2'protein_coding'25DEGain132.330N/ABX322613.2N/A
183237.03AE000661.20'IG_C_gene'13DEGain130.250N/AAE000661.20N/A
193346.95CPNE1'protein_coding'3682AEGain13.7111EU AB CE I16_AR280.00
203366.94SCAMP5'protein_coding'28AEGain6.865EU ES IR E3a_E5a0.00
213536.84MATR3'protein_coding'525AEGain21.9310EU ES AB CE ER4a42.86
223836.68SLC6A15'protein_coding'416DEGain102.250N/ASLC6A15N/A
233956.64AC002480.6'protein_coding'35AEGain18.674AB E1_Da0
243976.62METTL7B'protein_coding'23DEGain98.120N/AMETTL7BN/A
254066.58AC100786.1'protein_coding'26AEGain22.246EU AB E3a_E4a50.00
264146.56AGTR1'protein_coding'1020DEGain94.240N/AAGTR1N/A
274236.53CNPY2'protein_coding'16AEGain16.184I3_SR40
284596.35NAV2'protein_coding'546AEGain2.748EU ES E18a_E20a28.57
294946.20FREM2'protein_coding'327DEGain73.550N/AFREM2N/A
305046.17BEST3'protein_coding'922AEGain3.9017EU ES AB IR E8a_E10a40.00
315116.14CAMTA1'protein_coding'1961AEGain10.6123EU AB CE E3a_E4a50.00
325346.07CAST'protein_coding'1346AEGain15.857EU ES ER16a50.00
335745.96GABBR1'protein_coding'2467AEGain4.4410EU ES AB IR E16a_E18a33.33
345935.88ZNF434'protein_coding'737AEGain11.1311EU AB IR ER13a0.00
355955.87YJEFN3'protein_coding'722AEGain12.3129EU AB IR CE E2a_E3a46.67
366075.82RPL37A'protein_coding'819AEGain7.903EU E1c_E1j0.00
376125.81CSAD'protein_coding'2057AEGain26.7019EU ES AB IR CE ER4a22.22
386205.80PSMC1'protein_coding'111AEGain9.047EU IR E3a_E4a50.00
396655.68DPCD'protein_coding'722AEGain12.513EU ES ER7a50.00
406725.66RP11-367G6.1'pseudogene'24DEGain50.540N/ARP11-367G6.1N/A
416735.66AC055707.1'lincRNA'313AEGain9.293ES IR CE Ix0
426745.66ZFYVE1'protein_coding'314AEGain6.232EU E1a_E2a100.00
436885.63DHRS4'protein_coding'716AEGain8.754EU ES CE I1_AR250.00
447045.60EIF4B'protein_coding'520AEGain10.978EU AB E3_Da16.67
457065.59HOXC8'protein_coding'12DEGain48.290N/AHOXC8N/A
467145.58AC104438.1'pseudogene'12AEGain6.201EU ER1a0
477165.57AC112777.1'rRNA_pseudogene'11DEGain47.360N/AAC112777.1N/A
487225.56COL5A2'protein_coding'459DEGain47.090N/ACOL5A2N/A
497365.52CA14'protein_coding'214DEGain45.950N/ACA14N/A
507395.52COX8A'protein_coding'12AEGain10.741EU E1a_E2a0
517555.47NASP'protein_coding'1235AEGain11.1410EU ES AB ER3b71.43
527665.44VGF'protein_coding'37DEGain43.520N/AVGFN/A
537695.44CDK6'protein_coding'516DEGain43.420N/ACDK6N/A
547715.44SNX17'protein_coding'934AEGain6.0911EU AB E1a_E2a71.43
557815.41MAP4'protein_coding'2365AEGain9.1810EU ES AB E10_Dd42.86
567855.40AP001024.1'protein_coding'24AEGain26.262EU AB ER4a0
577875.39POLR2F'protein_coding'1434AEGain5.444EU AB ER15a0.00
587965.37NDUFB4'protein_coding'613AEGain9.4611EU AB IR E1a_E2b40.00
597985.37C20orf199'processed_transcript'810AEGain10.028EU ES E2a_E6a42.86
608015.36PSMB1'protein_coding'311AEGain8.222EU E1a_E2b0.00
618065.35EIF4E2'protein_coding'1534AEGain7.467EU ES AB IR E4a_E6a0.00
628135.34MAT2A'protein_coding'1439AEGain4.794EU ES ER1g100.00
638385.30ZEB2'protein_coding'2858AEGain4.556EU AB ER23c50.00
648635.24RPS14'protein_coding'38AEGain9.593EU E2a_E3a50.00
658695.22PFDN5'protein_coding'37AEGain6.825EU E2a_E3a100.00
668745.22AC027763.1'processed_transcript'13AEGain3.462EU AB E2_Aa0
678865.20HLA-F'protein_coding'2145AEGain7.068EU AB IR CE I4_AR10.00
688895.20SNAP25'protein_coding'514AEGain5.189EU ES E4a_E10a75.00
698955.19COX5B'protein_coding'411AEGain8.878EU ES AB E3b_E4a66.67
708985.19SESN3'protein_coding'312DEGain36.400N/ASESN3N/A
719005.19RPL31'protein_coding'1122AEGain6.875EU ES AB ER1i33.33
729035.17AC118282.5'protein_coding'23DEGain36.080N/AAC118282.5N/A
739045.17RPS8'protein_coding'818AEGain6.544EU AB E3_Da0.00
749055.17AP000787.1'lincRNA'11DEGain35.900N/AAP000787.1N/A
759075.16AC106045.2'pseudogene'14AEGain7.543EU AB ER2a0.00
769175.14NPNT'protein_coding'414DEGain35.330N/ANPNTN/A
779185.14GPR162'protein_coding'833AEGain9.685EU ES IR E9a_E11b0.00
789205.14LUC7L'protein_coding'2148AEGain7.8719EU ES AB E2_Db55.56
799265.12CDKN1A'protein_coding'716DEGain17.125EU AB CE CDKN1A0.00
809285.12DCTN2'protein_coding'216AEGain7.144EU ES E2a_E5a100.00
819385.09CYTSB'protein_coding'1030AEGain9.868EU ES AB CE E6a_E8a0.00
829445.08CHMP4A'protein_coding'212AEGain10.815EU AB CE I5_AR3100.00
839465.07AC119751.8'protein_coding'24DEGain33.700N/AAC119751.8N/A
849495.07POU3F4'protein_coding'11DEGain33.620N/APOU3F4N/A
859565.06ARHGEF9'protein_coding'929AEGain8.046EU ES CE ER2e33.33
869685.04AC094107.1'lincRNA'12AEGain7.051CE I1_AR20
879755.03AC009022.2'protein_coding'218AEGain7.974EU E16a_E17a0.00
889854.99CDH6'protein_coding'112DEGain31.790N/ACDH6N/A
899974.98APH1A'protein_coding'1125AEGain20.146EU AB ER2c100.00
9010124.96GDAP1'protein_coding'28AEGain2.473EU AB E2_Ab0.00
9110164.95RIC8B'protein_coding'1028AEGain10.043EU I16_SR4100.00
9210184.94NOMO1'protein_coding'234AEGain5.705EU CE ER16a0.00
9310264.93SPAG9'protein_coding'537AEGain9.2511EU AB IR CE I18_AR233.33
9410274.93MED12'protein_coding'1274AEGain6.026EU AB ER42b25.00
9510374.92MTSS1L'protein_coding'217AEGain6.797EU ES IR ER15b50.00
9610664.87FKBP10'protein_coding'1028DEGain29.2410EU ES AB FKBP100.00
9710674.87SSR2'protein_coding'1431AEGain8.793EU ES E2a_E4a0.00
9810684.87FAM184B'protein_coding'118AEGain2.563EU AB E18_Aa0.00
9910734.86JPH4'protein_coding'311AEGain6.862EU ER7b0.00
10010744.86SUMO2'protein_coding'24AEGain6.845EU E1a_E2a75.00
10110814.85IGF2BP2'protein_coding'1137DEGain28.850N/AIGF2BP2N/A
10210884.84ATP5I'protein_coding'14AEGain17.854EU E2a_E3a66.67
10310894.84SCRN3'protein_coding'1128AEGain5.226EU ER10c40.00
10410974.83RNF182'protein_coding'715DEGain28.490N/ARNF182N/A
10511034.82C16orf62'protein_coding'437AEGain4.861I31_SR30
10611054.82EPB41L2'protein_coding'1132AEGain8.449EU ES E13a_E15a62.50
10711084.81ATF7'protein_coding'515AEGain7.796EU ES CE I1_AR133.33
10811114.80MORF4L1'protein_coding'316AEGain7.157EU E7a_E8a50.00
10911124.80NEFL'protein_coding'310DEGain27.860N/ANEFLN/A
11011134.80MRPL33'protein_coding'819AEGain8.144EU ES E5a_E7b66.67
11111184.80CCDC94'protein_coding'18AEGain6.502EU E2a_E3a0.00
11211214.79RPS19'protein_coding'16AEGain8.325EU E3a_E4a75.00
11311224.79IRF2BP2'protein_coding'35AEGain7.602EU AB ER2a0
11411254.79PTBP2'protein_coding'1432AEGain5.127EU CE I10_AR480.00
11511364.78RPS26'protein_coding'14AEGain6.878EU AB IR ER4a0.00
11611524.75TAF1A'protein_coding'925AEGain6.154EU AB ER1e0.00
11711534.75PAX2'protein_coding'822DEGain26.840N/APAX2N/A
11811574.74AC215219.2'protein_coding'213AEGain6.815EU AB E5a_E6a100.00
11911624.73UBAP1'protein_coding'310AEGain5.241EU ER2a0
12011734.72PPIC'protein_coding'27DEGain26.310N/APPICN/A
12111754.71SEZ6L'protein_coding'1131AEGain4.794EU ES ENST0000034370666.67
12211774.71STYXL1'protein_coding'1635AEGain7.119EU AB ER10a66.67
12311794.71CDC2'protein_coding'919DEGain26.170N/ACDC2N/A
12411814.71SDHALP2'protein_coding'930AEGain7.576EU AB ER5a0.00
12511884.70SYT1'protein_coding'418DEGain26.040N/ASYT1N/A
12611894.70CDC42EP4'protein_coding'24AEGain3.272EU E1a_E2a100.00
12711914.70GSTM3'protein_coding'517AEGain4.682EU ER3a100.00
12811954.69CYP3A5'protein_coding'1642AEGain4.424EU AB ER1c100.00
12911994.69CCDC132'protein_coding'2069AEGain7.277EU ES AB ER2a40.00
13012014.69XRCC3'protein_coding'312AEGain5.8018EU AB IR E2a_E3a33.33
13112034.69AC118282.2'protein_coding'24DEGain25.730N/AAC118282.2N/A
13212144.67BOLA1'protein_coding'410AEGain7.813EU ER1a50.00
13312234.65SHOX2'protein_coding'720DEGain25.190N/ASHOX2N/A
13412254.65WASH6P'protein_coding'1848AEGain7.1113EU AB E3_Dd16.67
13512394.64SPG11'protein_coding'242AEGain5.748EU IR CE I39_AR20.00
13612434.64CHN1'protein_coding'1951AEGain7.655EU AB E11_Ac0.00
13712474.63C20orf194'protein_coding'342AEGain3.535EU AB CE I7_AR20.00
13812524.63C20orf103'protein_coding'27DEGain24.790N/AC20orf103N/A
13912564.63RP1-21O18.1'protein_coding'1030AEGain2.2672EU AB IR CE E10_Db75.00
14012574.63RGS16'protein_coding'15DEGain24.700N/ARGS16N/A
14112584.63DUSP4'protein_coding'514DEGain24.700N/ADUSP4N/A
14212604.62TCEAL3'protein_coding'413AEGain5.003EU AB ER4c0.00
14312654.61NXPH4'protein_coding'12DEGain24.480N/ANXPH4N/A
14412714.61RPS7'protein_coding'922AEGain7.469EU AB E2e_E2f50.00
14512734.61UQCRQ'protein_coding'715AEGain17.835EU E1d_E1i50.00
14612744.61KIAA2026'protein_coding'211AEGain6.252EU I4_SR20
14712804.60AC015917.1'pseudogene'12AEGain6.532EU AB ER2a0
14812834.60ATP6V1C1'protein_coding'216AEGain12.4913EU AB ER2a50.00
14912854.60LRP1B'protein_coding'598AEGain5.6512EU CE I1_AR2116.67
15012864.59MAP3K13'protein_coding'1643AEGain6.674EU AB E2a_E3a0.00
15112874.59ITGA7'protein_coding'732DEGain24.087EU ES AB IR ITGA70.00
15212884.59SFRS1'protein_coding'25AEGain5.779EU AB IR I2_AR1100.00
15312974.57RPS2'protein_coding'17AEGain6.233EU E2a_E3a50.00
15412984.57PCK2'protein_coding'212DEGain23.790N/APCK2N/A
15513004.57DLGAP1'protein_coding'1128AEGain3.909EU ES CE E3b_E5a60.00
15613044.57DDB2'protein_coding'410DEGain12.5912EU AB IR DDB225.00
15713074.57LGALS3BP'protein_coding'312AEGain9.952EU E2a_E3a100.00
15813124.56PPIE'protein_coding'1738AEGain8.9418EU AB E6a_E7a68.75
15913144.56IARS'protein_coding'2070AEGain17.6223EU AB IR CE I22_AR733.33
16013224.55B9D1'protein_coding'1332AEGain6.8218EU AB IR E6b_E7a50.00
16113274.54RPL27A'protein_coding'15AEGain7.065EU AB E3_Aa66.67
16213294.54NPTX1'protein_coding'15DEGain23.220N/ANPTX1N/A
16313364.53TTC3'protein_coding'2589AEGain6.026EU ES AB E37a_E39a0.00
16413414.52CPVL'protein_coding'1239DEGain23.010N/ACPVLN/A
16513444.52SMAP1'protein_coding'821AEGain5.364EU ES AB E5a_E7a100.00
16613454.51RPS24'protein_coding'1736AEGain5.6712EU AB E4_Ab28.57
16713524.51E2F7'protein_coding'315DEGain22.780N/AE2F7N/A
16813534.51NDUFB7'protein_coding'13AEGain5.933EU E1a_E2a50.00
16913574.50AC090519.7'pseudogene'13AEGain4.863EU AB ER3a0.00
17013584.50DTNA'protein_coding'1541AEGain5.137EU AB ER5a50.00
17113704.49IL13RA2'protein_coding'315DEGain22.500N/AIL13RA2N/A
17213764.49NCOR2'protein_coding'2594AEGain2.3413EU ES AB CE E50a_E53a25.00
17313814.48MAP2'protein_coding'2053AEGain5.898EU ES AB E19b_E21a33.33
17413834.48BAG1'protein_coding'1230AEGain3.216EU AB ENST0000037970775.00
17513874.47IL18BP'protein_coding'922AEGain6.883EU IR I1_AR10
17613884.47UBTF'protein_coding'424AEGain6.333AB E3_Aa0
17713904.47TPD52'protein_coding'415AEGain3.848EU ES AB IR ER1b25.00
17813984.46COX7C'protein_coding'13AEGain15.752EU E1a_E2a0.00
17914024.45HOXC10'protein_coding'12DEGain21.870N/AHOXC10N/A
18014044.45C12orf43'protein_coding'28AEGain4.122EU E3a_E4a100.00
18114094.44AC116340.1'rRNA_pseudogene'11DEGain21.720N/AAC116340.1N/A
18214104.44GTF2A1'protein_coding'411AEGain6.556EU E10a_E11a60.00
18314124.44RPS28'protein_coding'36AEGain4.914EU ER2d33.33
18414194.43HMGCS1'protein_coding'211DEGain21.552ES AB HMGCS10
18514264.43NOV'protein_coding'15DEGain21.510N/ANOVN/A
18614354.42SF3B2'protein_coding'226AEGain4.287EU ER2a83.33
18714434.40PTX3'protein_coding'13DEGain21.110N/APTX3N/A
18814444.40TERF1'protein_coding'312AEGain5.635EU AB ER1c0.00
18914454.40ZCRB1'protein_coding'18AEGain7.093EU E1a_E2a0.00
19014464.40LL22NC03-80A10.2'protein_coding'418AEGain4.836EU AB CE E8_Da0.00
19114474.40PPAP2C'protein_coding'38DEGain21.060N/APPAP2CN/A
19214504.39SPCS2'protein_coding'15AEGain14.444EU E3a_E4a100.00
19314634.38COX6C'protein_coding'14AEGain18.633EU E2a_E3a50.00
19414654.38NTRK3'protein_coding'625AEGain4.513EU AB E20_Da100.00
19514674.38SETDB1'protein_coding'1551AEGain7.087EU AB CE I15_AR20.00
19614754.37RPS18'protein_coding'819AEGain3.935EU AB E3_Ad0.00
19714774.37AL592183.5'protein_coding'28DEGain20.650N/AAL592183.5N/A
19814834.36SPRY1'protein_coding'24DEGain20.592EU AB SPRY10
19914884.36NEUROD4'protein_coding'12DEGain20.500N/ANEUROD4N/A
20014904.36RABL2B'protein_coding'2045AEGain5.357EU AB ER6a20.00
20114924.36DDX12'protein_coding'434AEGain5.885EU AB CE I5_AR20.00
20214944.35TMEM87A'protein_coding'323AEGain6.222EU E1a_E2a0.00
20314964.35TMPRSS5'protein_coding'113AEGain6.865EU AB CE I8_AR20
20414994.35SERPINH1'protein_coding'28DEGain20.361EU SERPINH10
20515034.34PAAF1'protein_coding'213AEGain13.835EU AB IR I20
20615074.34FAM92A1'protein_coding'512AEGain16.1910EU AB CE I7_AR80.00
20715154.33TOP2A'protein_coding'557DEGain20.160N/ATOP2AN/A
20815214.33GTF3C2'protein_coding'1550AEGain6.355AB CE E3_Da0
20915244.33NSL1'protein_coding'816AEGain7.036EU AB E1_Ac33.33
21015264.33RBM5'protein_coding'2782AEGain5.9118EU AB ER19a50.00
21115284.32APEX1'protein_coding'411AEGain5.064EU AB E5_Db0.00
21215354.32TCF25'protein_coding'322AEGain5.898EU IR CE I6_AR40.00
21315424.31CLASP1'protein_coding'1977AEGain6.2310EU ES AB E34a_E36a42.86
21415804.28TGIF1'protein_coding'1016DEGain19.390N/ATGIF1N/A
21515864.27NEUROD1'protein_coding'24DEGain19.320N/ANEUROD1N/A
21616024.25C14orf118'protein_coding'416AEGain5.352EU I10_SR20
21716054.25ARHGAP20'protein_coding'319DEGain19.050N/AARHGAP20N/A
21816064.25RABGAP1L'protein_coding'2569AEGain3.908EU AB E22_Da33.33
21916114.25DDX47'protein_coding'314AEGain11.943EU E2a_E3a100.00
22016154.24UAP1'protein_coding'924AEGain11.005EU AB ER10a100.00
22116164.24PSMB5'protein_coding'511AEGain16.702EU AB E1_Ac0
22216174.24COX7A2L'protein_coding'1123AEGain6.089EU ES AB ER2b0.00
22316194.24HUS1'protein_coding'1131AEGain5.883EU AB ER12a0
22416204.24BTN3A1'protein_coding'927AEGain4.013EU AB ER2b0.00
22516234.24CLDND1'protein_coding'710AEGain4.861ES E1a_E4a0
22616334.23EYA4'protein_coding'931DEGain18.730N/AEYA4N/A
22716384.22C14orf159'protein_coding'921AEGain5.065EU ES AB E7a_E8a66.67
22816434.22GAS2L3'protein_coding'18DEGain18.650N/AGAS2L3N/A
22916494.22SNRNP27'protein_coding'516AEGain6.946EU E2a_E3a40.00
23016514.22PMF1'protein_coding'927AEGain5.053EU ES E1a_E6a50.00
23116574.21UTP6'protein_coding'527AEGain5.541ES E1a_E3a0
23216584.20SLC35A5'protein_coding'722AEGain6.443EU AB E2_Da100.00
23316634.20FRAS1'protein_coding'584DEGain18.380N/AFRAS1N/A
23416654.20ANKRD28'protein_coding'1758AEGain4.855EU IR CE I11_SR30
23516694.20C2orf68'protein_coding'512AEGain5.514EU E2a_E3a0.00
23616704.20RPS21'protein_coding'819AEGain13.9012EU AB ER3d55.56
23716724.19ZBTB34'protein_coding'23AEGain6.001EU ER2c0
23816784.19HOXC9'protein_coding'12DEGain18.220N/AHOXC9N/A
23916814.19SRR'protein_coding'18AEGain10.7720EU AB IR CE E2_Da0
24016884.18HOXC4'protein_coding'26DEGain18.160N/AHOXC4N/A
24116894.18SP3'protein_coding'1021AEGain6.002EU CE I6_AR70
24216904.18AP000872.1'protein_coding'333DEGain18.140N/AAP000872.1N/A
24316924.18PMS2'protein_coding'929AEGain14.275EU AB ER14b0.00
24416934.18HOOK3'protein_coding'122AEGain7.593EU E16a_E17a100.00
24516944.18AP2A2'protein_coding'635AEGain4.484EU ES E15a_E17a33.33
24617084.17TSPAN4'protein_coding'1428AEGain5.146EU AB E9c_E9d33.33
24717114.16PAPSS1'protein_coding'112AEGain5.182EU ER2a100.00
24817124.16INVS'protein_coding'734AEGain2.736EU AB E2_Da75.00
24917244.15PRSS12'protein_coding'113DEGain17.790N/APRSS12N/A
25017284.15GNAS'protein_coding'6199AEGain10.069EU ES AB ER22f20.00
25117294.15AP4M1'protein_coding'1949AEGain10.694EU AB ER4a0.00


Candidate Differential and Alternative Expression Genes (Loss ONLY)

The following table lists candidate genes ranked according to 'Score'. Only the top 250 genes appear in each list. For a complete list download the results file provided above. To appear in this list, a 'candidate gene' must be differentially expressed at the gene level (DE) or contain at least one alternatively expressed (AE) feature. The 'Score' is based on the fold change as well as other factors for AE events (multiple features supporting the same event, reciprocity, etc.). The 'Event Type' indicates whether the gene was differentially expressed ('DE') or alternatively expressed 'AE'. 'Direction' refers to the direction (+ve/-ve) of the fold change. 'Gain' (+ve) indicates higher expression in library A than library B and vice versa. 'FC' stands for fold change. '# AE Events' is the number of significant alternative expression events observed for each gene. 'AE Codes' refers to various alternative expression subtypes (listed above). The 'Top Feature' is the most significant AE event observed for an AE gene. 'Adjacency' refers to the number of consecutive AE features (potentially supporting the same isoform). 'Adjacency %' refers to the percent of all AE events for a gene that were adjacent to each other.


RankOverall
Rank
ScoreNameGene
Type
Trans.
Count
Exon
Count
Event
Type
DirectionFC# AE
Events
AE CodesTop FeatureAdjacency
%
1114.95AASS'protein_coding'739AELoss-392.838EU AB IR CE E24_Dc0.00
2214.27ST3GAL5'protein_coding'1535AELoss-229.245EU AB E17_Aa0
3314.11MSH5'protein_coding'2878AELoss-483.6830EU ES AB IR E15a_E16a27.27
4413.61C19orf29'protein_coding'422AELoss-326.5111EU AB E4_Aa50.00
5513.55AC133435.2'lincRNA'12AELoss-2586.033EU AB E1a_E2a0
6613.48GTPBP5'protein_coding'1330AELoss-438.2112EU AB E3_Db28.57
7713.41PANK1'protein_coding'720AELoss-106.934EU AB E4_Da100.00
8913.28AIFM1'protein_coding'624AELoss-227.313EU AB E11_Aa0.00
91013.17FARP1'protein_coding'839AELoss-276.984ES AB E20_Aa0
101113.08RP1-12G14.4'pseudogene'22AELoss-2594.512AB E1_Ab0
111213.03AC007216.1'pseudogene'13AELoss-357.525EU AB E2a_E3a0.00
121312.96FAM73A'protein_coding'422AELoss-145.8912EU AB E10f_E11a28.57
131412.84FAM116A'protein_coding'938AELoss-268.693EU AB E21_Ab0
141512.21DHX34'protein_coding'633AELoss-239.303EU AB E15_Aa0
151612.10MAP2K2'protein_coding'826AELoss-179.834EU AB E7a_E7c50.00
161712.08MRPS18B'protein_coding'513AELoss-102.365EU AB E2_Dd33.33
171812.06ARMC10'protein_coding'1024AELoss-110.6312EU ES AB CE E9_Aa50.00
181912.03RWDD2B'protein_coding'718AELoss-112.615EU AB E2_Da50.00
192111.94AP000692.1'processed_transcript'12AELoss-777.683EU AB E1a_E2a0
202211.93ZNF283'protein_coding'942AELoss-214.9811EU ES AB CE E17_Db0.00
212311.79SLC25A17'protein_coding'1644AELoss-137.895EU AB E3_Da0
222411.72AC034193.2'lincRNA'12AELoss-131.414AB IR E1_Da0
232511.63AC096663.2'pseudogene'24AELoss-213.423EU AB E1_Da0
242611.56DOCK4'protein_coding'2187AELoss-145.156EU AB E51_Aa0.00
252711.50C7orf46'protein_coding'821AELoss-205.014EU AB E3_Da100.00
262811.49AC128648.1'protein_coding'18AELoss-745.765EU AB E2a_E3a0.00
272911.26MORC2'protein_coding'638AELoss-121.345EU ES AB E2_Da50.00
283011.21SLC25A15'protein_coding'720AELoss-136.263EU AB E9_Aa0
293111.19DHTKD1'protein_coding'627AELoss-127.083EU AB E16_Db0.00
303211.06CHCHD2'protein_coding'26AELoss-167.314EU AB E1_Ab100.00
313311.05PHACTR4'protein_coding'729AELoss-145.549EU ES AB E19_Dc16.67
323411.03SLC27A1'protein_coding'418AELoss-25.9612EU AB CE E8_Aa16.67
333511.01ACTA2'protein_coding'717AELoss-69.022EU AB E4_Db0
343610.90C21orf58'protein_coding'1331AELoss-101.335EU AB E9_Dd0.00
353710.89AC007620.1'processed_transcript'12AELoss-65.402EU AB E1_Da0
363910.78NMNAT1'protein_coding'615AELoss-66.0413EU ES AB ENST0000046268677.78
374010.78MMADHC'protein_coding'621AELoss-116.214EU AB E8_Da0
384110.77FIS1'protein_coding'919AELoss-558.994EU ES AB E5_Aa50.00
394210.73LIMK1'protein_coding'931AELoss-108.496EU ES AB E16_Aa0.00
404310.71ELK4'protein_coding'38AELoss-70.211AB E2_Da0
414410.70RETSAT'protein_coding'1030AELoss-42.507EU AB E6_Da100.00
424510.66FTSJ2'protein_coding'614AELoss-46.184EU AB E5_Da100.00
434610.62TAPBPL'protein_coding'218AELoss-111.556EU AB E14a_E15a0.00
444710.62RANBP2'protein_coding'1149AELoss-116.534EU AB E13_Dc0.00
454810.61AKT2'protein_coding'2672AELoss-73.4523EU ES AB CE E9_Aa0.00
464910.51AC007308.1'processed_transcript'12AELoss-117.712EU AB E1a_E2a0
475010.47AC138409.3'protein_coding'28AELoss-99.867EU AB E5a_E6a33.33
485110.39PHC3'protein_coding'2459AELoss-94.429EU ES AB E6_Da0.00
495210.37C10orf18'protein_coding'1239AELoss-87.888EU AB E23_Db33.33
505310.34TMEM104'protein_coding'213AELoss-67.402EU AB E3_Da0
515410.27SNORA72'lincRNA'12AELoss-99.921AB E1_Da0
525510.26CROCCL1'processed_transcript'420AELoss-103.675EU ES AB E11_Db0.00
535710.16POLR2B'protein_coding'1347AELoss-52.204EU AB IR E3_Ab100.00
545810.14LDHA'protein_coding'1237AELoss-44.416EU AB E10_Aa0.00
555910.08VGLL4'protein_coding'1843AELoss-56.0513EU ES AB E10_Aa25.00
566010.07GBA'protein_coding'1746AELoss-84.8113EU AB E5_Aa40.00
576110.02MED24'protein_coding'1350AELoss-98.6410EU AB E2_Aa62.50
58629.98SLC2A11'protein_coding'3070AELoss-93.3911EU ES AB E13_Df0.00
59639.97TAF13'protein_coding'27AELoss-51.978EU AB IR E5_Aa33.33
60649.96C17orf45'protein_coding'2044AELoss-137.0626EU AB ER2j55.56
61659.96PLD3'protein_coding'1542AELoss-79.078EU AB IR E12_Aa0
62669.87PDHB'protein_coding'1034AELoss-60.608EU AB E1_Dg40.00
63679.87ANO10'protein_coding'1952AELoss-59.998EU AB E4_Ab0.00
64689.86IDE'protein_coding'844AELoss-44.356EU AB E5_Da0.00
65699.83PRPF3'protein_coding'829AELoss-380.242AB E14_Aa0
66709.80NUDT1'protein_coding'1320AELoss-57.113EU ES AB E4_Da100.00
67719.72EIF2B3'protein_coding'1131AELoss-63.609EU ES AB E8_Db0.00
68729.72GNL3L'protein_coding'530AELoss-77.588EU AB E19e_E19d25.00
69739.68SNRNP25'protein_coding'719AELoss-73.644EU AB E2_Aa0.00
70749.68NDUFS2'protein_coding'1545AELoss-49.138EU ES AB E13_Aa33.33
71759.67TMEM111'protein_coding'517AELoss-69.992AB E2_Aa0
72779.62C22orf25'protein_coding'2757AELoss-59.6619EU ES AB E6_Db50.00
73789.60C1orf151'protein_coding'1128AELoss-53.5412EU AB IR E3_Aa0.00
74799.59CBS'protein_coding'1848AELoss-50.176EU ES AB E4_Aa0.00
75819.51SEPT2'protein_coding'47102AELoss-390.433EU AB E12_Da0
76829.50MLLT6'protein_coding'1038AELoss-286.622ES AB E13_Db0
77839.49CYB561D1'protein_coding'815AELoss-244.502AB E2_Db0
78849.49KIAA1704'protein_coding'824AELoss-68.968EU AB E13_Aa0.00
79869.46ZNF730'protein_coding'15AELoss-70.781AB E5_Aa0
80879.45HDLBP'protein_coding'50143AELoss-68.1818EU ES AB E16b_E16b22.22
81889.43CXorf57'protein_coding'726AELoss-61.953AB E9_Aa0
82899.40AGRN'protein_coding'1054AELoss-49.945EU ES AB E25_Aa50.00
83909.40PARP1'protein_coding'1042AELoss-62.527EU AB ER24c33.33
84929.33AC004540.1'processed_transcript'822AELoss-25.5213EU AB IR E6_Da50.00
85939.32POLR3H'protein_coding'1026AELoss-105.544EU AB E3_Db100.00
86949.31CNOT10'protein_coding'1952AELoss-213.0814EU ES AB E21_Ab16.67
87969.22STK38L'protein_coding'114AELoss-37.686CE I1_AR50
88979.21DHX40'protein_coding'325AELoss-69.066EU AB E10_Aa0.00
89989.18IDH1'protein_coding'1338AELoss-30.447EU ES AB CE E2_Aa50.00
90999.17RAB7A'protein_coding'1026AELoss-65.9813EU AB E5b_E5c16.67
911009.17NHP2L1'protein_coding'1022AELoss-30.754EU AB E8_Dc100.00
921019.14C7orf44'protein_coding'2047AELoss-159.2614EU ES AB IR E11_Df12.50
931029.14MLL3'protein_coding'1899AELoss-215.7617EU AB IR CE E62a_E63a0.00
941039.13HBEGF'protein_coding'310AELoss-161.001AB E5_Aa0
951049.12C4orf36'protein_coding'313AELoss-63.043AB E9_Dc0
961059.08PTPRZ1'protein_coding'1255AELoss-174.9814EU ES AB E16_Ad22.22
971069.05HMGN1'protein_coding'2146AELoss-58.2518EU AB ER5j33.33
981079.05RPL7A'protein_coding'1127AELoss-457.538EU AB E2_Ab25.00
991089.02ALG3'protein_coding'1638AELoss-30.415EU AB E5_Df50.00
1001098.99RNF121'protein_coding'418AELoss-36.703EU ES AB E4_Aa0.00
1011108.98RABGEF1'protein_coding'1028AELoss-49.5811EU AB CE E9a_E10a0.00
1021118.97MAP3K7IP2'protein_coding'619AELoss-144.793ES AB E5_Aa0
1031128.97PDIA3'protein_coding'622AELoss-42.184ES AB E1a_E4a0
1041138.96CYP20A1'protein_coding'1443AELoss-100.8710EU ES AB CE E7a_E10a66.67
1051148.96LZTS2'protein_coding'923AELoss-21.767EU AB E7_Aa0.00
1061158.93ARIH2'protein_coding'3576AELoss-54.7041EU ES AB E5_Dd50.00
1071168.91HMGB1'protein_coding'1227AELoss-180.2621EU ES AB IR E6b_E7b55.56
1081178.90CDC16'protein_coding'1237AELoss-51.365EU AB E18_Aa66.67
1091188.90TNR'protein_coding'627DELoss-477.090N/ATNRN/A
1101198.84AC133555.1'protein_coding'14AELoss-216.044EU AB E3a_E4a0.00
1111208.84NOP14'protein_coding'323AELoss-32.642EU AB E19_Aa0
1121218.80CCNL2'protein_coding'2158AELoss-31.563EU AB E9_Da0
1131228.79AC024075.1'lincRNA'12AELoss-150.492AB E1_Da0
1141238.77SON'protein_coding'2558AELoss-44.378EU AB IR E3_Da0.00
1151248.74HEATR3'protein_coding'620AELoss-40.244EU AB E13_Ab0.00
1161258.74RPS9'protein_coding'1323AELoss-154.535EU ES ER1h75.00
1171268.74AC026271.1'processed_transcript'210AELoss-43.642AB E8_Aa0
1181278.73C9orf80'protein_coding'720AELoss-128.7011EU AB E3_Db20.00
1191288.72H6PD'protein_coding'27AELoss-136.633EU AB E5_Ac0
1201298.69HLA-C'protein_coding'1227AELoss-48.7810EU ES AB E1_Ak50.00
1211308.67TRIM22'protein_coding'1233AELoss-27.476EU AB E9_Da50.00
1221318.67ZNF3'protein_coding'1639AELoss-50.0916EU AB E4_Dc18.18
1231328.67TOP3A'protein_coding'835AELoss-24.355EU AB E19_Db100.00
1241338.66PDHA1'protein_coding'1234AELoss-21.275EU ES AB E11_Aa33.33
1251348.65AL590714.1'protein_coding'15AELoss-60.357EU AB IR CE E1a_E2a100.00
1261358.63RAB3GAP2'protein_coding'1155AELoss-30.207EU AB CE E37_Aa50.00
1271368.62KDELC2'protein_coding'311AELoss-26.852AB E7_Da0
1281378.62GPR17'protein_coding'713DELoss-393.550N/AGPR17N/A
1291388.62POLM'protein_coding'2049AELoss-35.254EU AB E6_Ab50.00
1301398.61AC087742.1'lincRNA'16AELoss-147.8810EU AB IR CE E1a_E2a100.00
1311408.61EIF4G3'protein_coding'1663AELoss-51.5911EU ES AB CE E4_Aa33.33
1321418.60AC121253.1'protein_coding'46AELoss-51.864EU AB E1_Dd0
1331428.59LAMP1'protein_coding'516AELoss-47.726EU AB E4a_E5a0.00
1341438.58SEPT7'protein_coding'1433AELoss-26.955EU ES AB E1b_E5a33.33
1351448.57KLHDC8A'protein_coding'414AELoss-12.264EU AB E9_Da0.00
1361458.55POLR2H'protein_coding'1433AELoss-38.615EU AB E6_Aa0.00
1371468.53CD46'protein_coding'2736AELoss-40.249EU AB E5_Ae50.00
1381478.49MATN2'protein_coding'322AELoss-8.6413EU ES AB IR I13_AR20.00
1391488.48ANXA7'protein_coding'521AELoss-41.494EU AB E15_Da0.00
1401498.47ING4'protein_coding'2346AELoss-208.336EU AB E4_Aa50.00
1411508.46ACSS2'protein_coding'2770AELoss-35.249EU AB IR E9_Aa0
1421518.43IPP'protein_coding'517AELoss-26.605ES AB E11_Aa0
1431528.42ABHD14A'protein_coding'1140AELoss-160.132AB E5_Ab0
1441538.40SAR1B'protein_coding'414AELoss-37.053EU AB E2_Da0
1451548.37AL354696.3'lincRNA'12AELoss-123.292AB E1_Da0
1461558.35CYBRD1'protein_coding'716AELoss-25.245EU AB E4_Aa0
1471568.33AL671710.1'lincRNA'15AELoss-21.753EU ES E1a_E5a100.00
1481588.31AFG3L1'processed_transcript'1841AELoss-123.735EU AB E2_Dc0.00
1491598.30AIMP2'protein_coding'412AELoss-39.412EU AB E3_Aa0
1501608.29XIST'processed_transcript'820DELoss-314.010N/AXISTN/A
1511618.29RP5-826L7.1'processed_transcript'12AELoss-110.173EU AB E2_Aa0
1521628.28TMEM14C'protein_coding'514AELoss-31.984EU AB E4a_E4b0.00
1531638.25MGST3'protein_coding'1431AELoss-38.0510EU AB E1_Ag20.00
1541648.23SEC63'protein_coding'1244AELoss-42.579EU ES AB E11_Aa0.00
1551658.22AC073940.1'pseudogene'12AELoss-140.963EU AB E2_Aa0
1561668.21AC138951.4'pseudogene'12AELoss-53.323EU AB E2_Aa100.00
1571678.21AC010323.2'lincRNA'12AELoss-128.733EU AB E1a_E2a0
1581688.21AKR1B1'protein_coding'1641AELoss-142.947EU AB E5_Ab66.67
1591698.21NGDN'protein_coding'313AELoss-36.032EU E5a_E6a0.00
1601708.20MSH6'protein_coding'822AELoss-33.292AB E5_Da0
1611718.19THOC7'protein_coding'822AELoss-43.452AB E2_Aa0
1621728.19PCDHGC5'protein_coding'69AELoss-94.805EU ES AB E5a_E7a100.00
1631738.18MANEAL'protein_coding'49AELoss-32.753EU AB E4_Dc0
1641748.17AP002770.2'lincRNA'13AELoss-29.371AB E2_Da0
1651758.17ZNF791'protein_coding'410AELoss-26.193EU AB E5_Dd0
1661768.15AC013283.2'lincRNA'12AELoss-37.544EU AB IR E1_Da0
1671778.14CKS1B'protein_coding'715AELoss-20.691AB E4_Aa0
1681788.14MTRF1'protein_coding'1133AELoss-38.045EU ES AB E6_Da50.00
1691798.12OGT'protein_coding'1246AELoss-104.8612EU ES AB E4_Da40.00
1701808.11WDR32'protein_coding'514AELoss-35.996EU AB E8_Db33.33
1711818.11AC007390.4'protein_coding'718AELoss-24.855EU AB E7_Ad50.00
1721828.10HLA-B'protein_coding'1029AELoss-37.5413EU ES AB E1f_E1o28.57
1731838.09AL691432.1'lincRNA'14AELoss-108.445EU AB E3_Aa0
1741848.08GFAP'protein_coding'411DELoss-271.132EU GFAP0.00
1751858.08CC2D1A'protein_coding'535AELoss-29.793AB E24_Aa0
1761868.07TRIM33'protein_coding'727AELoss-92.987EU AB E16_Db0.00
1771878.04HNRNPC'protein_coding'818AELoss-36.6010EU ES AB E2_Da20.00
1781888.04AC130686.3'protein_coding'517AELoss-18.6617EU AB IR ENST0000046509766.67
1791898.01CDC42'protein_coding'717AELoss-20.673EU ES AB E3_Da0.00
1801908.00BMS1P1'pseudogene'316AELoss-88.226EU AB E9_Aa75.00
1811917.99ZNRF3'protein_coding'416AELoss-40.053AB E5_Aa0
1821927.97MCFD2'protein_coding'1733AELoss-28.4612EU AB E6_Da33.33
1831937.92DHDDS'protein_coding'1630AELoss-22.824EU AB E8_Da0.00
1841947.88MRPL48'protein_coding'313AELoss-13.435EU ES AB E6_Aa100.00
1851957.87STRBP'protein_coding'1042AELoss-113.816EU AB E2_Aa50.00
1861967.86HK1'protein_coding'2460AELoss-24.147EU AB E6_Aa0.00
1871977.84SUPT16H'protein_coding'126AELoss-24.892EU E16a_E17a0.00
1881987.83RP11-179H18.3'processed_transcript'12AELoss-111.071AB E1_Da0
1891997.83USP33'protein_coding'1040AELoss-24.189EU ES AB CE E2_Ab20.00
1902007.82AC004086.1'protein_coding'28AELoss-144.435EU E2a_E3a50.00
1912017.82PON2'protein_coding'1645AELoss-20.115EU AB E5_Dc0
1922027.81FOXN2'protein_coding'414AELoss-23.113EU AB E3a_E3c0.00
1932037.79NDUFB5'protein_coding'1640AELoss-27.6219EU ES AB E7_Aa66.67
1942047.79AC010733.5'processed_transcript'12AELoss-81.082AB E2_Aa0
1952057.79ARFGAP3'protein_coding'1228AELoss-27.235EU AB E2_Da0.00
1962067.78HLA-A'protein_coding'926AELoss-24.855EU AB E6b_E6b0.00
1972077.77CRTC2'protein_coding'933AELoss-130.676EU ES AB E8_Aa33.33
1982087.76RAB5A'protein_coding'1028AELoss-25.861AB E2_Da0
1992097.74TRAPPC2'protein_coding'819AELoss-74.898EU ES AB E5a_E5b50.00
2002107.72FAT3'protein_coding'534AELoss-3.946EU AB E3_Aa100.00
2012117.72VCAN'protein_coding'518AELoss-178.813EU CE E13a_E14a0.00
2022127.72CCNL1'protein_coding'2662AELoss-18.8931EU ES AB IR E4o_E4q16.67
2032137.71CIDECP'processed_transcript'713AELoss-30.722EU AB E4_Aa0
2042147.70ZNF425'protein_coding'512AELoss-93.443EU AB E5_Ab0
2052157.70AL136180.1'protein_coding'12AELoss-75.891AB E2_Aa0
2062167.69MDM2'protein_coding'2236AELoss-26.695EU AB ER14c50.00
2072177.69AC018633.1'pseudogene'226AELoss-31.5710EU AB E18_Aa0.00
2082187.69ZYX'protein_coding'1234AELoss-5.448EU AB E1_Ad50.00
2092197.67PDDC1'protein_coding'619AELoss-122.015EU AB ENST000004653130.00
2102207.67DCUN1D2'protein_coding'1229AELoss-30.261AB E10_Db0
2112217.65SPP1'protein_coding'411AELoss-10.005EU AB E6_Da100.00
2122227.65CNN3'protein_coding'617AELoss-30.211AB E3_Aa0
2132237.65CTD-2124B20.1'protein_coding'23AELoss-33.483AB E1_Da0
2142247.64PSIP1'protein_coding'1134AELoss-77.346EU AB CE E9a_E10a33.33
2152257.64AC009065.2'lincRNA'12AELoss-87.575EU AB IR E1a_E2a0
2162267.64MOV10'protein_coding'2066AELoss-26.8918EU ES AB E4_Da41.67
2172287.63TMEM218'protein_coding'27AELoss-19.965EU AB CE E2_Aa0
2182297.63ZC3H11A'protein_coding'1243AELoss-27.808EU AB E5a_E6a0.00
2192307.63KIAA0090'protein_coding'1656AELoss-33.0610EU AB E20_Aa0.00
2202317.63BAX'protein_coding'610AELoss-15.441AB E5_Da0
2212327.62DISP1'protein_coding'418AELoss-69.892EU AB E3_Da0
2222337.60AMT'protein_coding'2554AELoss-27.164EU AB E2_Aa0
2232347.60AC079316.2'lincRNA'12AELoss-20.822AB E2_Aa0
2242357.59FAM45A'protein_coding'1130AELoss-27.0013EU ES AB E12_Aa12.50
2252367.59RPS27'protein_coding'410AELoss-83.404EU E2b_E3a0.00
2262377.59AC004019.3'processed_transcript'14AELoss-17.861AB E2_Da0
2272397.56RPP14'protein_coding'1334AELoss-22.2713EU ES AB ENST000004620460.00
2282407.56EIF4A2'protein_coding'2961AELoss-25.3816EU AB E2_Dg30.00
2292417.55AC063943.3'lincRNA'13AELoss-67.492AB E3_Aa0
2302427.54C1orf61'protein_coding'2757AELoss-20.3429EU ES AB IR E10_Dh46.67
2312437.53RINT1'protein_coding'832AELoss-19.1110EU ES AB IR E5_Aa100.00
2322447.52TOR1AIP2'protein_coding'616AELoss-28.465EU ES AB E4_Aa0.00
2332457.52SNUPN'protein_coding'412AELoss-71.631AB E2_Aa0
2342467.50USP4'protein_coding'1448AELoss-18.696EU ES AB E19_Da0.00
2352477.50PKD1'protein_coding'26115AELoss-171.5725EU ES AB IR E28_Db14.29
2362487.49TAPBP'protein_coding'1329AELoss-66.247EU AB E4_Aa33.33
2372497.49CD74'protein_coding'310DELoss-179.430N/ACD74N/A
2382507.48CD24L4'protein_coding'11DELoss-178.550N/ACD24L4N/A
2392517.47PLA2G6'protein_coding'3584AELoss-22.8328EU ES AB IR CE E15_Da41.67
2402527.47ZNF789'protein_coding'1532AELoss-92.913EU AB E7_Da0
2412537.46GGCT'protein_coding'1020AELoss-18.0710EU AB E4_Aa66.67
2422547.45FAM107A'protein_coding'919DELoss-174.310N/AFAM107AN/A
2432557.43FUT10'protein_coding'410AELoss-15.771AB E4_Db0
2442567.42GFPT1'protein_coding'530AELoss-26.263EU AB E3_Da0
2452577.41XPO1'protein_coding'3188AELoss-22.9417EU AB E6_Aa30.00
2462587.41GEFT'protein_coding'830AELoss-18.711AB E13_Ab0
2472597.40CPSF3L'protein_coding'2577AELoss-20.5937EU ES AB IR E4_Dc38.46
2482607.37IDH3B'protein_coding'1541AELoss-17.7710EU AB E5c_E5c12.50
2492617.36TFIP11'protein_coding'2355AELoss-29.5311EU AB E7_Da25.00
2502627.35VHL'protein_coding'512AELoss-20.262AB E2_Aa0
2512637.35FOXM1'protein_coding'310AELoss-5.8011EU ES AB E9_Aa37.50