Summary page for comparison: 'OLG01_TIC_vs_OLG01_PRI' (HS0709_vs_HS1082) - Project: Oligo


Download complete candidate list as tab delimited text file: OLG01_TIC_vs_OLG01_PRI.txt


Summary of Differential (DE) and Alternative Expression (AE) for all gene loci:

Total Candidate Genes: 9,537 (of 49,867 possible genes)

DE Genes: 3,554

AE Genes: 7,220

Alternative Exon Usage (EU) Genes: 5,704

Alernative Exon Skipping (ES) Genes: 1,243

Alternative Exon Boundary (AB) Genes: 3,515

Intron Retention (IR) Genes: 579

Cryptic Exon (CE) Genes: 823


Candidate Differential AND Alternative Expression Genes

The following table lists candidate genes ranked according to 'Score'. Only the top 250 genes appear in each list. For a complete list download the results file provided above. To appear in this list, a 'candidate gene' must be differentially expressed at the gene level (DE) or contain at least one alternatively expressed (AE) feature. The 'Score' is based on the fold change as well as other factors for AE events (multiple features supporting the same event, reciprocity, etc.). The 'Event Type' indicates whether the gene was differentially expressed ('DE') or alternatively expressed 'AE'. 'Direction' refers to the direction (+ve/-ve) of the fold change. 'Gain' (+ve) indicates higher expression in library A than library B and vice versa. 'FC' stands for fold change. '# AE Events' is the number of significant alternative expression events observed for each gene. 'AE Codes' refers to various alternative expression subtypes (listed above). The 'Top Feature' is the most significant AE event observed for an AE gene. 'Adjacency' refers to the number of consecutive AE features (potentially supporting the same isoform). 'Adjacency %' refers to the percent of all AE events for a gene that were adjacent to each other.


RankOverall
Rank
ScoreNameGene
Type
Trans.
Count
Exon
Count
Event
Type
DirectionFC# AE
Events
AE CodesTop FeatureAdjacency
%
1114.69AP000692.1'processed_transcript'12AELoss-582.493EU AB E1a_E2a0
2214.11ST3GAL5'protein_coding'1535AELoss-191.184AB E17_Aa0
3313.95AASS'protein_coding'739AELoss-306.489EU AB CE E24_Dc66.67
4413.74AC128648.1'protein_coding'18AELoss-539.165EU AB E2a_E3a0.00
5513.46AC133435.2'lincRNA'12AELoss-2031.593EU AB E1a_E2a0
6613.39C19orf29'protein_coding'422AELoss-276.538EU AB E4_Aa0.00
7713.23GTPBP5'protein_coding'1330AELoss-396.989EU AB E3_Db60.00
8812.90AIFM1'protein_coding'624AELoss-226.211AB E11_Aa0
9912.79MSH5'protein_coding'2878AELoss-339.0518EU ES AB CE E15a_E16a50.00
101012.77FARP1'protein_coding'839AELoss-250.202AB E20_Aa0
111112.68PQLC2'protein_coding'923AELoss-116.914EU AB E10_Aa100.00
121212.56FAM116A'protein_coding'938AELoss-232.113AB CE E21_Ab0
131312.52AC007216.1'pseudogene'13AELoss-265.365EU AB E2a_E3a0.00
141412.34RP1-12G14.4'pseudogene'22AELoss-1389.272AB E1_Ab0
151512.00AC087742.1'lincRNA'16AELoss-114.4215EU AB IR E1a_E2a100.00
161611.97C7orf46'protein_coding'821AELoss-158.077EU AB CE E3_Da0.00
171711.96FAM73A'protein_coding'422AELoss-111.646EU AB E10f_E11a50.00
181811.87ZNF283'protein_coding'942AELoss-179.6611EU AB CE E17_Db0.00
191911.84CYB561D1'protein_coding'815AELoss-199.793EU AB E2_Db0
202011.74AC138409.3'protein_coding'28AELoss-75.028EU AB E5a_E6a50.00
212111.66DHX34'protein_coding'633AELoss-199.692EU AB E15_Aa0
222211.61AC005197.3'protein_coding'12AELoss-124.471AB E1_Da0
232311.58SLC25A17'protein_coding'1644AELoss-133.194EU AB CE E3_Da0
242411.56MAP2K2'protein_coding'826AELoss-115.114EU AB E7a_E7c50.00
252511.24AC034193.2'lincRNA'12AELoss-104.011AB E1_Da0
262611.17C21orf58'protein_coding'1331AELoss-103.532AB E9_Dd0
272711.17RWDD2B'protein_coding'718AELoss-96.317EU ES AB E2_Da33.33
282811.17C7orf44'protein_coding'2047AELoss-139.8711EU ES AB IR E11_Df25.00
292911.16ELK4'protein_coding'38AELoss-97.831AB E2_Da0
303011.13DOCK4'protein_coding'2187AELoss-146.395EU AB E51_Aa0.00
313111.09TOP2A'protein_coding'557AELoss-39.249EU AB E19_Da40.00
323211.04PTPRZ1'protein_coding'1255AELoss-141.0113EU ES AB E16_Ad30.00
333311.02HMGB1'protein_coding'1227AELoss-142.6015EU ES AB IR E6b_E7b57.14
343410.91AC007620.1'processed_transcript'12AELoss-69.111AB E1_Da0
353510.89SLC25A15'protein_coding'720AELoss-120.693EU AB E9_Aa0
363610.88PHACTR4'protein_coding'729AELoss-125.514EU AB E19_Dc0.00
373710.80FIS1'protein_coding'919AELoss-531.407EU ES AB E5_Aa60.00
383810.79PANK1'protein_coding'720AELoss-95.841AB E4_Da0
393910.71LIMK1'protein_coding'931AELoss-108.433EU AB E16_Aa0
404010.66GNL3L'protein_coding'530AELoss-65.967EU AB E19e_E19d33.33
414110.49SNORA72'lincRNA'12AELoss-91.241AB E1_Da0
424210.48DHTKD1'protein_coding'627AELoss-109.681AB E16_Db0
434310.47MORC2'protein_coding'638AELoss-116.873ES AB E2_Da0
444410.44AKT2'protein_coding'2672AELoss-64.456EU ES AB E9_Aa0.00
454510.24PARP1'protein_coding'1042AELoss-52.454EU AB ER24c100.00
464610.22MRPS18B'protein_coding'513AELoss-96.073EU AB E2_Dd100.00
474710.12NDUFS2'protein_coding'1545AELoss-53.545EU ES AB E13_Aa100.00
484810.11AC073940.1'pseudogene'12AELoss-122.554EU AB E2_Aa100.00
494910.04CHN2'protein_coding'2664AELoss-79.8922EU ES AB E7_Aa18.75
505010.04TMEM104'protein_coding'213AELoss-65.793EU ES AB E3_Da100.00
515110.03RPS10'protein_coding'714AEGain59.486EU ES E4a_E5a40.00
525210.01PHC3'protein_coding'2459AELoss-72.426EU AB E6_Da0
53539.98ARMC10'protein_coding'1024AELoss-109.7517EU ES AB IR CE E9_Aa66.67
54549.96CHCHD2'protein_coding'26AELoss-78.573EU AB E1_Ab0
55559.96CROCCL1'processed_transcript'420AELoss-97.633AB CE E11_Db0
56569.93NUDT1'protein_coding'1320AELoss-49.863EU ES AB E4_Da100.00
57579.92NHP2L1'protein_coding'1022AELoss-42.484EU AB E8_Dc100.00
58589.83OGT'protein_coding'1246AELoss-86.448EU ES AB E4_Da0.00
59599.83AGRN'protein_coding'1054AELoss-52.526EU ES AB E25_Aa33.33
60609.78CBS'protein_coding'1848AELoss-52.523AB E4_Aa0
61619.77C22orf25'protein_coding'2757AELoss-52.7914EU ES AB E6_Db33.33
62629.73AIMP2'protein_coding'412AELoss-36.511AB E3_Aa0
63639.73TAPBPL'protein_coding'218AELoss-78.036EU AB E14a_E15a0
64649.71TMEM111'protein_coding'517AELoss-72.013AB E2_Aa0
65659.70ACTA2'protein_coding'717AELoss-65.336EU ES AB E4_Db50.00
66669.68SEPT2'protein_coding'47102AELoss-347.083EU AB E12_Da0
67679.68TNRC18'protein_coding'1565AELoss-41.476EU AB E25_Da0
68689.59RPS25'protein_coding'15AEGain29.865EU E2a_E3a75.00
69699.58RP3-476K8.2'processed_transcript'12AELoss-66.041AB E2_Aa0
70709.58ALG3'protein_coding'1638AELoss-26.954EU AB E5_Df100.00
71719.52CTC-398G3.2'pseudogene'24AELoss-38.992AB E1_Ab0
72729.43PDHB'protein_coding'1034AELoss-50.656EU AB E1_Dg50.00
73739.42ANO10'protein_coding'1952AELoss-63.099EU AB E4_Ab25.00
74749.40AL136180.1'protein_coding'12AELoss-74.591AB E2_Aa0
75759.39CD46'protein_coding'2736AELoss-38.434EU AB E5_Ae0
76769.33WDR44'protein_coding'835AELoss-37.883EU AB E22_Da0.00
77779.32SNUPN'protein_coding'412AELoss-59.211AB E2_Aa0
78789.30VGLL4'protein_coding'1843AELoss-46.1512EU ES AB CE E10_Aa0.00
79799.27KIAA1704'protein_coding'824AELoss-56.858EU ES AB E13_Aa0.00
80809.27MED24'protein_coding'1350AELoss-65.949EU AB E2_Aa66.67
81819.25PRPF3'protein_coding'829AELoss-378.896EU AB IR E14_Aa0
82829.24VCAN'protein_coding'518AELoss-68.7512EU AB IR CE E13a_E14a0
83839.19AC130686.3'protein_coding'517AELoss-33.283EU AB E9_Db0.00
84849.18SEPT7'protein_coding'1433AELoss-51.406EU ES AB E1b_E5a25.00
85859.10RPS29'protein_coding'24AEGain129.494EU ES E2a_E3a100.00
86869.09NMNAT1'protein_coding'615AELoss-56.048EU ES AB ENST0000046268625.00
87879.07TRIM22'protein_coding'1233AELoss-30.963AB E9_Da0
88889.07RPL7A'protein_coding'1127AELoss-337.8812EU AB IR E2_Ab16.67
89899.05AC010733.5'processed_transcript'12AELoss-63.131AB E2_Aa0
90909.05GPR82'protein_coding'25AELoss-61.175EU AB E3_Ac0.00
91919.02SNRNP25'protein_coding'719AELoss-63.007EU AB E2_Aa60.00
92929.01MLL3'protein_coding'1899AELoss-163.9816EU AB IR CE E62a_E63a50.00
93939.00RPS27'protein_coding'410AELoss-46.374EU E2b_E3a0.00
94948.99AC121253.1'protein_coding'46AELoss-46.234EU AB E1_Dd0
95958.95SLC2A11'protein_coding'3070AELoss-78.4514EU AB E13_Df40.00
96968.94BMS1P1'pseudogene'316AELoss-76.696EU AB E9_Aa75.00
97978.94C1orf151'protein_coding'1128AELoss-48.3116EU ES AB IR E3_Aa50.00
98988.90CNOT10'protein_coding'1952AELoss-162.2813EU ES AB E21_Ab0.00
99998.90ETV5'protein_coding'1439AELoss-34.422AB E8_Db0
1001008.89AC004447.1'lincRNA'12AELoss-52.432EU AB E1a_E2a0
1011018.84AL589863.1'pseudogene'13AELoss-36.353AB E2_Aa0
1021028.84AC063943.3'lincRNA'13AELoss-59.472AB E3_Aa0
1031038.83CDC16'protein_coding'1237AELoss-41.3114EU AB IR E18_Aa33.33
1041048.82MLC1'protein_coding'722AELoss-39.053EU ES E7a_E9a0.00
1051058.80MLLT6'protein_coding'1038AELoss-229.511AB E13_Db0
1061068.78GS1-174L6.1'processed_transcript'12AELoss-51.652EU AB E1a_E2a0
1071078.77AC026271.1'processed_transcript'210AELoss-39.071AB E8_Aa0
1081088.77FNBP1'protein_coding'1643AELoss-53.0115EU ES AB IR CE E17a_E24b33.33
1091098.72TAF13'protein_coding'27AELoss-45.683EU AB E5_Aa0
1101108.68LAMP1'protein_coding'516AELoss-54.194EU AB E4a_E5a0.00
1111118.66MTA1'protein_coding'1954AELoss-33.964EU ES AB E10_Da0.00
1121128.64CCNL2'protein_coding'2158AELoss-29.773EU AB E9_Da0
1131138.62RPL9'protein_coding'312AEGain26.1112EU AB E3a_E4a66.67
1141148.60AFG3L1'processed_transcript'1841AELoss-121.205EU AB E2_Dc0.00
1151158.59FAT3'protein_coding'534AELoss-3.059EU ES AB E3_Aa66.67
1161168.58RABGEF1'protein_coding'1028AELoss-43.889EU ES AB E9a_E10a0.00
1171178.58NDUFB5'protein_coding'1640AELoss-24.5915EU ES AB E7_Aa63.64
1181188.58POLM'protein_coding'2049AELoss-28.991AB E6_Ab0
1191198.58SON'protein_coding'2558AELoss-43.3112EU ES AB E3_Da25.00
1201208.57AC012170.2'lincRNA'15AELoss-45.228EU AB E3a_E4a75.00
1211218.56C7orf59'protein_coding'1222AELoss-40.637EU ES AB E3_Dc50.00
1221228.55AGAP2'protein_coding'220AELoss-15.103EU E15a_E16a100.00
1231238.53PDHA1'protein_coding'1234AELoss-19.195EU ES AB E11_Aa33.33
1241248.53AC133555.1'protein_coding'14AELoss-161.043EU AB E3a_E4a0
1251258.52EIF2B3'protein_coding'1131AELoss-46.459EU AB E8_Db0.00
1261268.52POLR2H'protein_coding'1433AELoss-35.532AB E6_Aa0
1271278.50ABHD14A'protein_coding'1140AELoss-154.663AB E5_Ab0
1281288.49ING4'protein_coding'2346AELoss-172.716EU AB E4_Aa50.00
1291298.46ACSS2'protein_coding'2770AELoss-39.3113EU AB IR E9_Aa0.00
1301308.44AC013283.2'lincRNA'12AELoss-33.901AB E1_Da0
1311318.41PKD1'protein_coding'26115AELoss-159.7020EU ES AB IR E28_Db0.00
1321328.40DENND1B'protein_coding'1544AELoss-38.471AB E4_Aa0
1331338.36HLA-B'protein_coding'1029AELoss-23.689EU AB E1k_E2a0.00
1341348.35SLC27A1'protein_coding'418AELoss-19.114AB IR E8_Aa0
1351358.34NRSN2'protein_coding'514AELoss-29.974EU AB E6_Db0.00
1361368.34ARIH2'protein_coding'3576AELoss-49.6615EU ES AB E5_Dd80.00
1371378.32GPR17'protein_coding'713DELoss-319.480N/AGPR17N/A
1381388.31MANEAL'protein_coding'49AELoss-43.531AB E4_Dc0
1391398.29HMGN1'protein_coding'2146AELoss-34.799EU AB ER5j25.00
1401408.28AKR1B1'protein_coding'1641AELoss-119.585EU AB E5_Ab0.00
1411418.27POLR2B'protein_coding'1347AELoss-43.599EU AB IR E3_Ab33.33
1421428.26MAP3K7IP2'protein_coding'619AELoss-121.443ES AB E5_Aa0
1431438.26AL671710.1'lincRNA'15AELoss-24.763EU ES E1a_E5a100.00
1441448.21RP11-179H18.3'processed_transcript'12AELoss-96.361AB E1_Da0
1451458.20H6PD'protein_coding'27AELoss-130.692AB E5_Ac0
1461468.19FTSJ2'protein_coding'614AELoss-35.403EU AB E5_Da0
1471478.19RPS3A'protein_coding'16AEGain42.408EU ES E2a_E3a71.43
1481488.17HNRNPC'protein_coding'818AELoss-29.785EU ES AB E2_Da0.00
1491498.16RANBP2'protein_coding'1149AELoss-114.591AB E13_Dc0
1501508.16ZNF3'protein_coding'1639AELoss-39.639EU AB E4_Dc40.00
1511518.15AL035420.2'lincRNA'12AEGain104.272EU AB ER2a0
1521528.14CCDC12'protein_coding'925AELoss-41.502EU AB E4_Db0
1531538.14AC093310.1'protein_coding'210DELoss-281.500N/AAC093310.1N/A
1541548.12AL354696.3'lincRNA'12AELoss-113.602AB E1_Da0
1551558.12SUPT16H'protein_coding'126AELoss-30.743EU E16a_E17a0.00
1561568.11CNN3'protein_coding'617AELoss-25.111AB E3_Aa0
1571578.10MKRN1'protein_coding'1644AELoss-46.956EU ES AB E9_Aa100.00
1581588.10SNRNP35'protein_coding'513AELoss-40.895EU AB E5_Ad0
1591598.09MRPL48'protein_coding'313AELoss-14.625EU ES AB E6_Aa100.00
1601608.07XPO1'protein_coding'3188AELoss-21.2215EU AB E6_Aa44.44
1611618.06RETSAT'protein_coding'1030AELoss-37.044AB E6_Da0
1621628.06EIF2B4'protein_coding'1136AELoss-49.206EU AB E2_Dn75.00
1631638.05MTRF1'protein_coding'1133AELoss-31.657EU ES AB E6_Da50.00
1641648.03XIST'processed_transcript'820DELoss-262.000N/AXISTN/A
1651658.02AP000662.1'lincRNA'12AELoss-30.493EU AB E1_Da0
1661668.00GSDMB'protein_coding'1428AELoss-38.494AB E2_Ad0
1671677.99RPL37A'protein_coding'819AEGain15.578EU AB E1c_E1j50.00
1681687.99C9orf80'protein_coding'720AELoss-105.356EU AB E3_Db0.00
1691697.98TFRC'protein_coding'1546AELoss-11.384EU AB E16_Aa0.00
1701707.98ZNF791'protein_coding'410AELoss-25.542EU AB E5_Dd0
1711717.95PDIA3'protein_coding'622AELoss-20.654EU ES AB E1a_E4a0.00
1721727.94SPP1'protein_coding'411AELoss-7.497EU AB E6_Da60.00
1731737.94AC010323.2'lincRNA'12AELoss-87.393EU AB E1a_E2a0
1741747.92GFAP'protein_coding'411DELoss-242.112EU GFAP0.00
1751757.91AC096663.2'pseudogene'24AELoss-149.443EU AB E1_Da0
1761767.89TNR'protein_coding'627DELoss-237.000N/ATNRN/A
1771777.87MGST3'protein_coding'1431AELoss-37.6510EU ES AB CE E1_Ag25.00
1781787.87HLA-C'protein_coding'1227AELoss-24.766EU AB E1_Ak0.00
1791797.84AC024075.1'lincRNA'12AELoss-124.751AB E1_Da0
1801807.84GFPT1'protein_coding'530AELoss-18.741AB E3_Da0
1811817.84MMADHC'protein_coding'621AELoss-83.055EU ES AB E8_Da50.00
1821827.83RAB7A'protein_coding'1026AELoss-77.187EU AB E5b_E5c33.33
1831837.82MSH6'protein_coding'822AELoss-28.033EU AB E5_Da0
1841847.82ARFGAP3'protein_coding'1228AELoss-28.124EU AB E2_Da0.00
1851857.82CRTC2'protein_coding'933AELoss-118.933EU ES AB E8_Aa0.00
1861867.82KIAA1033'protein_coding'234AELoss-19.765AB IR E25_Da0
1871877.82AMT'protein_coding'2554AELoss-23.749EU AB E2_Aa57.14
1881887.82RPL3'protein_coding'2248AELoss-30.3222EU ES AB CE E6_Ad21.43
1891897.81WDR32'protein_coding'514AELoss-30.292EU AB E8_Db0
1901907.80C10orf18'protein_coding'1239AELoss-79.033EU AB E23_Db0.00
1911917.80IDH3B'protein_coding'1541AELoss-24.434EU E5c_E5c0.00
1921927.80FAM45A'protein_coding'1130AELoss-29.0312EU ES AB E12_Aa14.29
1931937.78RNF121'protein_coding'418AELoss-32.043EU ES AB E4_Aa0.00
1941947.78HSPD1'protein_coding'1443AELoss-24.807EU ES AB E5_Db50.00
1951957.76TMEM218'protein_coding'27AELoss-17.844EU ES AB E2_Aa100.00
1961967.75TOR1AIP2'protein_coding'616AELoss-26.692ES AB E4_Aa0
1971977.74HEATR3'protein_coding'620AELoss-32.194EU AB E13_Ab0.00
1981987.73BX322613.2'protein_coding'25DEGain212.130N/ABX322613.2N/A
1991997.73AL691432.1'lincRNA'14AELoss-80.135EU AB E3_Aa0
2002007.71PFKL'protein_coding'1243AELoss-33.378EU ES AB E13_Af50.00
2012017.71TFR2'protein_coding'1345AELoss-27.205EU AB E10_Aa0
2022027.70RAB5A'protein_coding'1028AELoss-24.352AB E2_Da0
2032037.68FUS'protein_coding'1236AELoss-31.957EU AB ENST000003945330.00
2042047.66PPIL2'protein_coding'1658AELoss-13.4427EU ES AB IR E8_Da41.67
2052057.65RAB3GAP2'protein_coding'1155AELoss-22.506EU ES AB CE E37_Aa0.00
2062067.65BAX'protein_coding'610AELoss-12.912ES AB E5_Da0
2072077.63LZTS2'protein_coding'923AELoss-17.804AB IR E7_Aa0
2082087.63CC2D1A'protein_coding'535AELoss-28.402AB E24_Aa0
2092097.62NGDN'protein_coding'313AELoss-23.923EU E5a_E6a0.00
2102107.61ATP2B1'protein_coding'523AELoss-8.626EU ES AB ENST0000035914275.00
2112117.60TNRC6A'protein_coding'1144AELoss-52.066EU ES AB E18_Dc0.00
2122127.58RPL23A'protein_coding'718AELoss-15.9917EU ES AB IR CE E1a_E4b28.57
2132137.57XXyac-R12DG2.3'protein_coding'416AELoss-147.168ES AB CE E2_Aa0
2142147.57FAM3C'protein_coding'724AELoss-13.628EU ES CE E10c_E11b33.33
2152157.54AC007308.1'processed_transcript'12AELoss-29.242EU AB ENST000004307190
2162167.54HDLBP'protein_coding'50143AELoss-68.1518EU ES AB IR E16b_E16b12.50
2172177.54AC005726.5'pseudogene'12AELoss-28.642AB E2_Aa0
2182187.50STRBP'protein_coding'1042AELoss-94.019AB IR CE E2_Aa0
2192197.49TRIM33'protein_coding'727AELoss-76.166EU AB CE E16_Db0.00
2202207.47FRMD6'protein_coding'320AELoss-6.484EU AB E4_Aa50.00
2212217.46ZNF425'protein_coding'512AELoss-73.703EU AB E5_Ab0
2222227.46P4HB'protein_coding'1541AELoss-22.044EU AB E8a_E8c0
2232237.44POR'protein_coding'2768AELoss-14.305EU AB E10_Da50.00
2242247.44GGCT'protein_coding'1020AELoss-15.898EU AB E4_Aa50.00
2252257.44HNRNPA1'protein_coding'314AEGain27.478EU E2a_E3a57.14
2262267.44AC004086.1'protein_coding'28AELoss-72.676EU E2a_E3a40.00
2272277.42CDC42'protein_coding'717AELoss-20.666EU ES AB E3_Da0.00
2282287.41AE000661.20'IG_C_gene'13DEGain169.860N/AAE000661.20N/A
2292297.40IDH1'protein_coding'1338AELoss-24.186EU ES AB E2_Aa66.67
2302307.40TMEM14C'protein_coding'514AELoss-25.264EU AB E4a_E4b0
2312317.39HBEGF'protein_coding'310AELoss-120.771AB E5_Aa0
2322327.37NDUFA3'protein_coding'1736AELoss-18.8420EU ES AB IR E8_Aa55.56
2332337.37AL121809.2'protein_coding'15AELoss-100.603EU AB E3_Aa0
2342347.36ZNF730'protein_coding'15AELoss-75.671AB E5_Aa0
2352357.36MDM2'protein_coding'2236AELoss-18.424EU AB ER14c50.00
2362367.35NLGN4X'protein_coding'720AELoss-145.051AB E5_Aa0
2372377.33AC145132.1'pseudogene'13AELoss-24.841AB E3_Aa0
2382387.32DHDDS'protein_coding'1630AELoss-21.523EU AB E8_Da0
2392397.32GEFT'protein_coding'830AELoss-20.791AB E13_Ab0
2402407.32CIDECP'processed_transcript'713AELoss-25.952AB E4_Aa0
2412417.31HK1'protein_coding'2460AELoss-24.805EU AB E6_Aa0
2422427.29C1orf61'protein_coding'2757AELoss-18.1914EU ES AB IR E10_Dh14.29
2432437.29TUBA1A'protein_coding'25AELoss-20.831AB E4_Da0
2442447.28LDHA'protein_coding'1237AELoss-47.507EU ES AB ER1g100.00
2452457.28RPL37'protein_coding'28AEGain21.896EU AB ER3a50.00
2462467.28PSME2'protein_coding'418AELoss-21.862ES AB E5a_E6c0
2472477.27LYRM4'protein_coding'819AELoss-43.684EU AB E3_Da100.00
2482487.26SFRS18'protein_coding'1032AELoss-85.7816EU AB E3_Dc66.67
2492497.26WISP1'protein_coding'45DEGain153.260N/AWISP1N/A
2502507.25PSIP1'protein_coding'1134AELoss-74.653EU AB E9a_E10a0.00
2512517.23PDDC1'protein_coding'619AELoss-88.485EU AB E6f_E6g0.00


Candidate Alternative Expression Genes

The following table lists candidate genes ranked according to 'Score'. Only the top 250 genes appear in each list. For a complete list download the results file provided above. To appear in this list, a 'candidate gene' must be differentially expressed at the gene level (DE) or contain at least one alternatively expressed (AE) feature. The 'Score' is based on the fold change as well as other factors for AE events (multiple features supporting the same event, reciprocity, etc.). The 'Event Type' indicates whether the gene was differentially expressed ('DE') or alternatively expressed 'AE'. 'Direction' refers to the direction (+ve/-ve) of the fold change. 'Gain' (+ve) indicates higher expression in library A than library B and vice versa. 'FC' stands for fold change. '# AE Events' is the number of significant alternative expression events observed for each gene. 'AE Codes' refers to various alternative expression subtypes (listed above). The 'Top Feature' is the most significant AE event observed for an AE gene. 'Adjacency' refers to the number of consecutive AE features (potentially supporting the same isoform). 'Adjacency %' refers to the percent of all AE events for a gene that were adjacent to each other.


RankOverall
Rank
ScoreNameGene
Type
Trans.
Count
Exon
Count
Event
Type
DirectionFC# AE
Events
AE CodesTop FeatureAdjacency
%
1114.69AP000692.1'processed_transcript'12AELoss-582.493EU AB E1a_E2a0
2214.11ST3GAL5'protein_coding'1535AELoss-191.184AB E17_Aa0
3313.95AASS'protein_coding'739AELoss-306.489EU AB CE E24_Dc66.67
4413.74AC128648.1'protein_coding'18AELoss-539.165EU AB E2a_E3a0.00
5513.46AC133435.2'lincRNA'12AELoss-2031.593EU AB E1a_E2a0
6613.39C19orf29'protein_coding'422AELoss-276.538EU AB E4_Aa0.00
7713.23GTPBP5'protein_coding'1330AELoss-396.989EU AB E3_Db60.00
8812.90AIFM1'protein_coding'624AELoss-226.211AB E11_Aa0
9912.79MSH5'protein_coding'2878AELoss-339.0518EU ES AB CE E15a_E16a50.00
101012.77FARP1'protein_coding'839AELoss-250.202AB E20_Aa0
111112.68PQLC2'protein_coding'923AELoss-116.914EU AB E10_Aa100.00
121212.56FAM116A'protein_coding'938AELoss-232.113AB CE E21_Ab0
131312.52AC007216.1'pseudogene'13AELoss-265.365EU AB E2a_E3a0.00
141412.34RP1-12G14.4'pseudogene'22AELoss-1389.272AB E1_Ab0
151512.00AC087742.1'lincRNA'16AELoss-114.4215EU AB IR E1a_E2a100.00
161611.97C7orf46'protein_coding'821AELoss-158.077EU AB CE E3_Da0.00
171711.96FAM73A'protein_coding'422AELoss-111.646EU AB E10f_E11a50.00
181811.87ZNF283'protein_coding'942AELoss-179.6611EU AB CE E17_Db0.00
191911.84CYB561D1'protein_coding'815AELoss-199.793EU AB E2_Db0
202011.74AC138409.3'protein_coding'28AELoss-75.028EU AB E5a_E6a50.00
212111.66DHX34'protein_coding'633AELoss-199.692EU AB E15_Aa0
222211.61AC005197.3'protein_coding'12AELoss-124.471AB E1_Da0
232311.58SLC25A17'protein_coding'1644AELoss-133.194EU AB CE E3_Da0
242411.56MAP2K2'protein_coding'826AELoss-115.114EU AB E7a_E7c50.00
252511.24AC034193.2'lincRNA'12AELoss-104.011AB E1_Da0
262611.17C21orf58'protein_coding'1331AELoss-103.532AB E9_Dd0
272711.17RWDD2B'protein_coding'718AELoss-96.317EU ES AB E2_Da33.33
282811.17C7orf44'protein_coding'2047AELoss-139.8711EU ES AB IR E11_Df25.00
292911.16ELK4'protein_coding'38AELoss-97.831AB E2_Da0
303011.13DOCK4'protein_coding'2187AELoss-146.395EU AB E51_Aa0.00
313111.09TOP2A'protein_coding'557AELoss-39.249EU AB E19_Da40.00
323211.04PTPRZ1'protein_coding'1255AELoss-141.0113EU ES AB E16_Ad30.00
333311.02HMGB1'protein_coding'1227AELoss-142.6015EU ES AB IR E6b_E7b57.14
343410.91AC007620.1'processed_transcript'12AELoss-69.111AB E1_Da0
353510.89SLC25A15'protein_coding'720AELoss-120.693EU AB E9_Aa0
363610.88PHACTR4'protein_coding'729AELoss-125.514EU AB E19_Dc0.00
373710.80FIS1'protein_coding'919AELoss-531.407EU ES AB E5_Aa60.00
383810.79PANK1'protein_coding'720AELoss-95.841AB E4_Da0
393910.71LIMK1'protein_coding'931AELoss-108.433EU AB E16_Aa0
404010.66GNL3L'protein_coding'530AELoss-65.967EU AB E19e_E19d33.33
414110.49SNORA72'lincRNA'12AELoss-91.241AB E1_Da0
424210.48DHTKD1'protein_coding'627AELoss-109.681AB E16_Db0
434310.47MORC2'protein_coding'638AELoss-116.873ES AB E2_Da0
444410.44AKT2'protein_coding'2672AELoss-64.456EU ES AB E9_Aa0.00
454510.24PARP1'protein_coding'1042AELoss-52.454EU AB ER24c100.00
464610.22MRPS18B'protein_coding'513AELoss-96.073EU AB E2_Dd100.00
474710.12NDUFS2'protein_coding'1545AELoss-53.545EU ES AB E13_Aa100.00
484810.11AC073940.1'pseudogene'12AELoss-122.554EU AB E2_Aa100.00
494910.04CHN2'protein_coding'2664AELoss-79.8922EU ES AB E7_Aa18.75
505010.04TMEM104'protein_coding'213AELoss-65.793EU ES AB E3_Da100.00
515110.03RPS10'protein_coding'714AEGain59.486EU ES E4a_E5a40.00
525210.01PHC3'protein_coding'2459AELoss-72.426EU AB E6_Da0
53539.98ARMC10'protein_coding'1024AELoss-109.7517EU ES AB IR CE E9_Aa66.67
54549.96CHCHD2'protein_coding'26AELoss-78.573EU AB E1_Ab0
55559.96CROCCL1'processed_transcript'420AELoss-97.633AB CE E11_Db0
56569.93NUDT1'protein_coding'1320AELoss-49.863EU ES AB E4_Da100.00
57579.92NHP2L1'protein_coding'1022AELoss-42.484EU AB E8_Dc100.00
58589.83OGT'protein_coding'1246AELoss-86.448EU ES AB E4_Da0.00
59599.83AGRN'protein_coding'1054AELoss-52.526EU ES AB E25_Aa33.33
60609.78CBS'protein_coding'1848AELoss-52.523AB E4_Aa0
61619.77C22orf25'protein_coding'2757AELoss-52.7914EU ES AB E6_Db33.33
62629.73AIMP2'protein_coding'412AELoss-36.511AB E3_Aa0
63639.73TAPBPL'protein_coding'218AELoss-78.036EU AB E14a_E15a0
64649.71TMEM111'protein_coding'517AELoss-72.013AB E2_Aa0
65659.70ACTA2'protein_coding'717AELoss-65.336EU ES AB E4_Db50.00
66669.68SEPT2'protein_coding'47102AELoss-347.083EU AB E12_Da0
67679.68TNRC18'protein_coding'1565AELoss-41.476EU AB E25_Da0
68689.59RPS25'protein_coding'15AEGain29.865EU E2a_E3a75.00
69699.58RP3-476K8.2'processed_transcript'12AELoss-66.041AB E2_Aa0
70709.58ALG3'protein_coding'1638AELoss-26.954EU AB E5_Df100.00
71719.52CTC-398G3.2'pseudogene'24AELoss-38.992AB E1_Ab0
72729.43PDHB'protein_coding'1034AELoss-50.656EU AB E1_Dg50.00
73739.42ANO10'protein_coding'1952AELoss-63.099EU AB E4_Ab25.00
74749.40AL136180.1'protein_coding'12AELoss-74.591AB E2_Aa0
75759.39CD46'protein_coding'2736AELoss-38.434EU AB E5_Ae0
76769.33WDR44'protein_coding'835AELoss-37.883EU AB E22_Da0.00
77779.32SNUPN'protein_coding'412AELoss-59.211AB E2_Aa0
78789.30VGLL4'protein_coding'1843AELoss-46.1512EU ES AB CE E10_Aa0.00
79799.27KIAA1704'protein_coding'824AELoss-56.858EU ES AB E13_Aa0.00
80809.27MED24'protein_coding'1350AELoss-65.949EU AB E2_Aa66.67
81819.25PRPF3'protein_coding'829AELoss-378.896EU AB IR E14_Aa0
82829.24VCAN'protein_coding'518AELoss-68.7512EU AB IR CE E13a_E14a0
83839.19AC130686.3'protein_coding'517AELoss-33.283EU AB E9_Db0.00
84849.18SEPT7'protein_coding'1433AELoss-51.406EU ES AB E1b_E5a25.00
85859.10RPS29'protein_coding'24AEGain129.494EU ES E2a_E3a100.00
86869.09NMNAT1'protein_coding'615AELoss-56.048EU ES AB ENST0000046268625.00
87879.07TRIM22'protein_coding'1233AELoss-30.963AB E9_Da0
88889.07RPL7A'protein_coding'1127AELoss-337.8812EU AB IR E2_Ab16.67
89899.05AC010733.5'processed_transcript'12AELoss-63.131AB E2_Aa0
90909.05GPR82'protein_coding'25AELoss-61.175EU AB E3_Ac0.00
91919.02SNRNP25'protein_coding'719AELoss-63.007EU AB E2_Aa60.00
92929.01MLL3'protein_coding'1899AELoss-163.9816EU AB IR CE E62a_E63a50.00
93939.00RPS27'protein_coding'410AELoss-46.374EU E2b_E3a0.00
94948.99AC121253.1'protein_coding'46AELoss-46.234EU AB E1_Dd0
95958.95SLC2A11'protein_coding'3070AELoss-78.4514EU AB E13_Df40.00
96968.94BMS1P1'pseudogene'316AELoss-76.696EU AB E9_Aa75.00
97978.94C1orf151'protein_coding'1128AELoss-48.3116EU ES AB IR E3_Aa50.00
98988.90CNOT10'protein_coding'1952AELoss-162.2813EU ES AB E21_Ab0.00
99998.90ETV5'protein_coding'1439AELoss-34.422AB E8_Db0
1001008.89AC004447.1'lincRNA'12AELoss-52.432EU AB E1a_E2a0
1011018.84AL589863.1'pseudogene'13AELoss-36.353AB E2_Aa0
1021028.84AC063943.3'lincRNA'13AELoss-59.472AB E3_Aa0
1031038.83CDC16'protein_coding'1237AELoss-41.3114EU AB IR E18_Aa33.33
1041048.82MLC1'protein_coding'722AELoss-39.053EU ES E7a_E9a0.00
1051058.80MLLT6'protein_coding'1038AELoss-229.511AB E13_Db0
1061068.78GS1-174L6.1'processed_transcript'12AELoss-51.652EU AB E1a_E2a0
1071078.77AC026271.1'processed_transcript'210AELoss-39.071AB E8_Aa0
1081088.77FNBP1'protein_coding'1643AELoss-53.0115EU ES AB IR CE E17a_E24b33.33
1091098.72TAF13'protein_coding'27AELoss-45.683EU AB E5_Aa0
1101108.68LAMP1'protein_coding'516AELoss-54.194EU AB E4a_E5a0.00
1111118.66MTA1'protein_coding'1954AELoss-33.964EU ES AB E10_Da0.00
1121128.64CCNL2'protein_coding'2158AELoss-29.773EU AB E9_Da0
1131138.62RPL9'protein_coding'312AEGain26.1112EU AB E3a_E4a66.67
1141148.60AFG3L1'processed_transcript'1841AELoss-121.205EU AB E2_Dc0.00
1151158.59FAT3'protein_coding'534AELoss-3.059EU ES AB E3_Aa66.67
1161168.58RABGEF1'protein_coding'1028AELoss-43.889EU ES AB E9a_E10a0.00
1171178.58NDUFB5'protein_coding'1640AELoss-24.5915EU ES AB E7_Aa63.64
1181188.58POLM'protein_coding'2049AELoss-28.991AB E6_Ab0
1191198.58SON'protein_coding'2558AELoss-43.3112EU ES AB E3_Da25.00
1201208.57AC012170.2'lincRNA'15AELoss-45.228EU AB E3a_E4a75.00
1211218.56C7orf59'protein_coding'1222AELoss-40.637EU ES AB E3_Dc50.00
1221228.55AGAP2'protein_coding'220AELoss-15.103EU E15a_E16a100.00
1231238.53PDHA1'protein_coding'1234AELoss-19.195EU ES AB E11_Aa33.33
1241248.53AC133555.1'protein_coding'14AELoss-161.043EU AB E3a_E4a0
1251258.52EIF2B3'protein_coding'1131AELoss-46.459EU AB E8_Db0.00
1261268.52POLR2H'protein_coding'1433AELoss-35.532AB E6_Aa0
1271278.50ABHD14A'protein_coding'1140AELoss-154.663AB E5_Ab0
1281288.49ING4'protein_coding'2346AELoss-172.716EU AB E4_Aa50.00
1291298.46ACSS2'protein_coding'2770AELoss-39.3113EU AB IR E9_Aa0.00
1301308.44AC013283.2'lincRNA'12AELoss-33.901AB E1_Da0
1311318.41PKD1'protein_coding'26115AELoss-159.7020EU ES AB IR E28_Db0.00
1321328.40DENND1B'protein_coding'1544AELoss-38.471AB E4_Aa0
1331338.36HLA-B'protein_coding'1029AELoss-23.689EU AB E1k_E2a0.00
1341348.35SLC27A1'protein_coding'418AELoss-19.114AB IR E8_Aa0
1351358.34NRSN2'protein_coding'514AELoss-29.974EU AB E6_Db0.00
1361368.34ARIH2'protein_coding'3576AELoss-49.6615EU ES AB E5_Dd80.00
1371388.31MANEAL'protein_coding'49AELoss-43.531AB E4_Dc0
1381398.29HMGN1'protein_coding'2146AELoss-34.799EU AB ER5j25.00
1391408.28AKR1B1'protein_coding'1641AELoss-119.585EU AB E5_Ab0.00
1401418.27POLR2B'protein_coding'1347AELoss-43.599EU AB IR E3_Ab33.33
1411428.26MAP3K7IP2'protein_coding'619AELoss-121.443ES AB E5_Aa0
1421438.26AL671710.1'lincRNA'15AELoss-24.763EU ES E1a_E5a100.00
1431448.21RP11-179H18.3'processed_transcript'12AELoss-96.361AB E1_Da0
1441458.20H6PD'protein_coding'27AELoss-130.692AB E5_Ac0
1451468.19FTSJ2'protein_coding'614AELoss-35.403EU AB E5_Da0
1461478.19RPS3A'protein_coding'16AEGain42.408EU ES E2a_E3a71.43
1471488.17HNRNPC'protein_coding'818AELoss-29.785EU ES AB E2_Da0.00
1481498.16RANBP2'protein_coding'1149AELoss-114.591AB E13_Dc0
1491508.16ZNF3'protein_coding'1639AELoss-39.639EU AB E4_Dc40.00
1501518.15AL035420.2'lincRNA'12AEGain104.272EU AB ER2a0
1511528.14CCDC12'protein_coding'925AELoss-41.502EU AB E4_Db0
1521548.12AL354696.3'lincRNA'12AELoss-113.602AB E1_Da0
1531558.12SUPT16H'protein_coding'126AELoss-30.743EU E16a_E17a0.00
1541568.11CNN3'protein_coding'617AELoss-25.111AB E3_Aa0
1551578.10MKRN1'protein_coding'1644AELoss-46.956EU ES AB E9_Aa100.00
1561588.10SNRNP35'protein_coding'513AELoss-40.895EU AB E5_Ad0
1571598.09MRPL48'protein_coding'313AELoss-14.625EU ES AB E6_Aa100.00
1581608.07XPO1'protein_coding'3188AELoss-21.2215EU AB E6_Aa44.44
1591618.06RETSAT'protein_coding'1030AELoss-37.044AB E6_Da0
1601628.06EIF2B4'protein_coding'1136AELoss-49.206EU AB E2_Dn75.00
1611638.05MTRF1'protein_coding'1133AELoss-31.657EU ES AB E6_Da50.00
1621658.02AP000662.1'lincRNA'12AELoss-30.493EU AB E1_Da0
1631668.00GSDMB'protein_coding'1428AELoss-38.494AB E2_Ad0
1641677.99RPL37A'protein_coding'819AEGain15.578EU AB E1c_E1j50.00
1651687.99C9orf80'protein_coding'720AELoss-105.356EU AB E3_Db0.00
1661697.98TFRC'protein_coding'1546AELoss-11.384EU AB E16_Aa0.00
1671707.98ZNF791'protein_coding'410AELoss-25.542EU AB E5_Dd0
1681717.95PDIA3'protein_coding'622AELoss-20.654EU ES AB E1a_E4a0.00
1691727.94SPP1'protein_coding'411AELoss-7.497EU AB E6_Da60.00
1701737.94AC010323.2'lincRNA'12AELoss-87.393EU AB E1a_E2a0
1711747.92GFAP'protein_coding'411DELoss-242.112EU GFAP0.00
1721757.91AC096663.2'pseudogene'24AELoss-149.443EU AB E1_Da0
1731777.87MGST3'protein_coding'1431AELoss-37.6510EU ES AB CE E1_Ag25.00
1741787.87HLA-C'protein_coding'1227AELoss-24.766EU AB E1_Ak0.00
1751797.84AC024075.1'lincRNA'12AELoss-124.751AB E1_Da0
1761807.84GFPT1'protein_coding'530AELoss-18.741AB E3_Da0
1771817.84MMADHC'protein_coding'621AELoss-83.055EU ES AB E8_Da50.00
1781827.83RAB7A'protein_coding'1026AELoss-77.187EU AB E5b_E5c33.33
1791837.82MSH6'protein_coding'822AELoss-28.033EU AB E5_Da0
1801847.82ARFGAP3'protein_coding'1228AELoss-28.124EU AB E2_Da0.00
1811857.82CRTC2'protein_coding'933AELoss-118.933EU ES AB E8_Aa0.00
1821867.82KIAA1033'protein_coding'234AELoss-19.765AB IR E25_Da0
1831877.82AMT'protein_coding'2554AELoss-23.749EU AB E2_Aa57.14
1841887.82RPL3'protein_coding'2248AELoss-30.3222EU ES AB CE E6_Ad21.43
1851897.81WDR32'protein_coding'514AELoss-30.292EU AB E8_Db0
1861907.80C10orf18'protein_coding'1239AELoss-79.033EU AB E23_Db0.00
1871917.80IDH3B'protein_coding'1541AELoss-24.434EU E5c_E5c0.00
1881927.80FAM45A'protein_coding'1130AELoss-29.0312EU ES AB E12_Aa14.29
1891937.78RNF121'protein_coding'418AELoss-32.043EU ES AB E4_Aa0.00
1901947.78HSPD1'protein_coding'1443AELoss-24.807EU ES AB E5_Db50.00
1911957.76TMEM218'protein_coding'27AELoss-17.844EU ES AB E2_Aa100.00
1921967.75TOR1AIP2'protein_coding'616AELoss-26.692ES AB E4_Aa0
1931977.74HEATR3'protein_coding'620AELoss-32.194EU AB E13_Ab0.00
1941997.73AL691432.1'lincRNA'14AELoss-80.135EU AB E3_Aa0
1952007.71PFKL'protein_coding'1243AELoss-33.378EU ES AB E13_Af50.00
1962017.71TFR2'protein_coding'1345AELoss-27.205EU AB E10_Aa0
1972027.70RAB5A'protein_coding'1028AELoss-24.352AB E2_Da0
1982037.68FUS'protein_coding'1236AELoss-31.957EU AB ENST000003945330.00
1992047.66PPIL2'protein_coding'1658AELoss-13.4427EU ES AB IR E8_Da41.67
2002057.65RAB3GAP2'protein_coding'1155AELoss-22.506EU ES AB CE E37_Aa0.00
2012067.65BAX'protein_coding'610AELoss-12.912ES AB E5_Da0
2022077.63LZTS2'protein_coding'923AELoss-17.804AB IR E7_Aa0
2032087.63CC2D1A'protein_coding'535AELoss-28.402AB E24_Aa0
2042097.62NGDN'protein_coding'313AELoss-23.923EU E5a_E6a0.00
2052107.61ATP2B1'protein_coding'523AELoss-8.626EU ES AB ENST0000035914275.00
2062117.60TNRC6A'protein_coding'1144AELoss-52.066EU ES AB E18_Dc0.00
2072127.58RPL23A'protein_coding'718AELoss-15.9917EU ES AB IR CE E1a_E4b28.57
2082137.57XXyac-R12DG2.3'protein_coding'416AELoss-147.168ES AB CE E2_Aa0
2092147.57FAM3C'protein_coding'724AELoss-13.628EU ES CE E10c_E11b33.33
2102157.54AC007308.1'processed_transcript'12AELoss-29.242EU AB ENST000004307190
2112167.54HDLBP'protein_coding'50143AELoss-68.1518EU ES AB IR E16b_E16b12.50
2122177.54AC005726.5'pseudogene'12AELoss-28.642AB E2_Aa0
2132187.50STRBP'protein_coding'1042AELoss-94.019AB IR CE E2_Aa0
2142197.49TRIM33'protein_coding'727AELoss-76.166EU AB CE E16_Db0.00
2152207.47FRMD6'protein_coding'320AELoss-6.484EU AB E4_Aa50.00
2162217.46ZNF425'protein_coding'512AELoss-73.703EU AB E5_Ab0
2172227.46P4HB'protein_coding'1541AELoss-22.044EU AB E8a_E8c0
2182237.44POR'protein_coding'2768AELoss-14.305EU AB E10_Da50.00
2192247.44GGCT'protein_coding'1020AELoss-15.898EU AB E4_Aa50.00
2202257.44HNRNPA1'protein_coding'314AEGain27.478EU E2a_E3a57.14
2212267.44AC004086.1'protein_coding'28AELoss-72.676EU E2a_E3a40.00
2222277.42CDC42'protein_coding'717AELoss-20.666EU ES AB E3_Da0.00
2232297.40IDH1'protein_coding'1338AELoss-24.186EU ES AB E2_Aa66.67
2242307.40TMEM14C'protein_coding'514AELoss-25.264EU AB E4a_E4b0
2252317.39HBEGF'protein_coding'310AELoss-120.771AB E5_Aa0
2262327.37NDUFA3'protein_coding'1736AELoss-18.8420EU ES AB IR E8_Aa55.56
2272337.37AL121809.2'protein_coding'15AELoss-100.603EU AB E3_Aa0
2282347.36ZNF730'protein_coding'15AELoss-75.671AB E5_Aa0
2292357.36MDM2'protein_coding'2236AELoss-18.424EU AB ER14c50.00
2302367.35NLGN4X'protein_coding'720AELoss-145.051AB E5_Aa0
2312377.33AC145132.1'pseudogene'13AELoss-24.841AB E3_Aa0
2322387.32DHDDS'protein_coding'1630AELoss-21.523EU AB E8_Da0
2332397.32GEFT'protein_coding'830AELoss-20.791AB E13_Ab0
2342407.32CIDECP'processed_transcript'713AELoss-25.952AB E4_Aa0
2352417.31HK1'protein_coding'2460AELoss-24.805EU AB E6_Aa0
2362427.29C1orf61'protein_coding'2757AELoss-18.1914EU ES AB IR E10_Dh14.29
2372437.29TUBA1A'protein_coding'25AELoss-20.831AB E4_Da0
2382447.28LDHA'protein_coding'1237AELoss-47.507EU ES AB ER1g100.00
2392457.28RPL37'protein_coding'28AEGain21.896EU AB ER3a50.00
2402467.28PSME2'protein_coding'418AELoss-21.862ES AB E5a_E6c0
2412477.27LYRM4'protein_coding'819AELoss-43.684EU AB E3_Da100.00
2422487.26SFRS18'protein_coding'1032AELoss-85.7816EU AB E3_Dc66.67
2432507.25PSIP1'protein_coding'1134AELoss-74.653EU AB E9a_E10a0.00
2442517.23PDDC1'protein_coding'619AELoss-88.485EU AB E6f_E6g0.00
2452527.22AC018633.1'pseudogene'226AELoss-25.095EU AB E18_Aa0.00
2462537.22RP11-3J10.3'pseudogene'23AELoss-74.872EU AB ENST000003965190
2472547.21SAP18'protein_coding'818AELoss-16.135EU AB E1_Ac0.00
2482557.21PLD3'protein_coding'1542AELoss-68.798EU AB IR E12_Aa0.00
2492567.21TRNAU1AP'protein_coding'1029AELoss-26.826EU AB CE E1_Dd0.00
2502577.20TTLL3'protein_coding'40100AELoss-56.4522EU ES AB E12_Ae16.67
2512597.18CKS1B'protein_coding'715AELoss-17.101AB E4_Aa0


Candidate Differential and Alternative Expression Genes (Gain ONLY)

The following table lists candidate genes ranked according to 'Score'. Only the top 250 genes appear in each list. For a complete list download the results file provided above. To appear in this list, a 'candidate gene' must be differentially expressed at the gene level (DE) or contain at least one alternatively expressed (AE) feature. The 'Score' is based on the fold change as well as other factors for AE events (multiple features supporting the same event, reciprocity, etc.). The 'Event Type' indicates whether the gene was differentially expressed ('DE') or alternatively expressed 'AE'. 'Direction' refers to the direction (+ve/-ve) of the fold change. 'Gain' (+ve) indicates higher expression in library A than library B and vice versa. 'FC' stands for fold change. '# AE Events' is the number of significant alternative expression events observed for each gene. 'AE Codes' refers to various alternative expression subtypes (listed above). The 'Top Feature' is the most significant AE event observed for an AE gene. 'Adjacency' refers to the number of consecutive AE features (potentially supporting the same isoform). 'Adjacency %' refers to the percent of all AE events for a gene that were adjacent to each other.


RankOverall
Rank
ScoreNameGene
Type
Trans.
Count
Exon
Count
Event
Type
DirectionFC# AE
Events
AE CodesTop FeatureAdjacency
%
15110.03RPS10'protein_coding'714AEGain59.486EU ES E4a_E5a40.00
2689.59RPS25'protein_coding'15AEGain29.865EU E2a_E3a75.00
3859.10RPS29'protein_coding'24AEGain129.494EU ES E2a_E3a100.00
41138.62RPL9'protein_coding'312AEGain26.1112EU AB E3a_E4a66.67
51478.19RPS3A'protein_coding'16AEGain42.408EU ES E2a_E3a71.43
61518.15AL035420.2'lincRNA'12AEGain104.272EU AB ER2a0
71677.99RPL37A'protein_coding'819AEGain15.578EU AB E1c_E1j50.00
81987.73BX322613.2'protein_coding'25DEGain212.130N/ABX322613.2N/A
92257.44HNRNPA1'protein_coding'314AEGain27.478EU E2a_E3a57.14
102287.41AE000661.20'IG_C_gene'13DEGain169.860N/AAE000661.20N/A
112457.28RPL37'protein_coding'28AEGain21.896EU AB ER3a50.00
122497.26WISP1'protein_coding'45DEGain153.260N/AWISP1N/A
132607.17SNAP25'protein_coding'514AEGain4.6910EU ES AB IR E4a_E10a50.00
142847.02AC002480.6'protein_coding'35AEGain14.583AB E1_Da0
153826.42PAAF1'protein_coding'213AEGain13.833EU IR I20
163926.37RPL13A'protein_coding'1235AEGain38.2916EU AB E2c_E2e58.33
173986.34AGTR1'protein_coding'1020DEGain80.990N/AAGTR1N/A
184006.34AC118282.2'protein_coding'24DEGain80.930N/AAC118282.2N/A
194136.28SOX2OT'processed_transcript'1741AEGain10.8716EU ES AB E4a_E5a42.86
204166.26GABBR1'protein_coding'2467AEGain3.2828EU ES AB IR CE E16a_E18a50.00
214346.18CNPY2'protein_coding'16AEGain16.183I3_SR40
224456.12RPS14'protein_coding'38AEGain10.473EU E2a_E3a50.00
234506.08FREM2'protein_coding'327DEGain67.660N/AFREM2N/A
244566.06METTL7B'protein_coding'23DEGain66.660N/AMETTL7BN/A
254646.03INCA1'protein_coding'29AEGain12.241CE I7_AR10
264726.01ZNF397OS'protein_coding'418AEGain9.276EU AB ER12a0.00
274746.01SDHALP2'protein_coding'930AEGain11.415EU AB ER5a0.00
285395.76VGF'protein_coding'37DEGain24.413EU AB VGF100.00
295755.65MAP4'protein_coding'2365AEGain7.817EU AB E10_Dd75.00
305895.61STYXL1'protein_coding'1635AEGain7.9814EU AB IR ER10a66.67
315925.60MED12'protein_coding'1274AEGain6.265EU AB ER42b33.33
326005.59AC118282.5'protein_coding'23DEGain48.150N/AAC118282.5N/A
336065.58HOXC8'protein_coding'12DEGain47.680N/AHOXC8N/A
346155.56EPB41L2'protein_coding'1132AEGain6.615EU ES E13a_E15a50.00
356225.54SCAMP5'protein_coding'28AEGain7.951ES E3a_E5a0
366325.52CAMTA1'protein_coding'1961AEGain8.6621EU AB CE E3a_E4a50.00
376385.49RPS27A'protein_coding'1129AEGain10.1012EU AB ER3i20.00
386395.49MFAP4'protein_coding'38DEGain44.910N/AMFAP4N/A
396455.48AC106045.2'pseudogene'14AEGain12.163EU AB ER2a0.00
406545.45AC100786.1'protein_coding'26AEGain31.444EU AB E3a_E4a50.00
416635.42RP11-367G6.1'pseudogene'24DEGain42.930N/ARP11-367G6.1N/A
426655.42ARHGEF9'protein_coding'929AEGain7.064EU AB CE ER2e100.00
437185.29AL645728.3'pseudogene'12AEGain6.052EU ER2a0.00
447195.29TSC22D4'protein_coding'617AEGain2.5112EU AB IR I171.43
457245.28PK4P'protein_coding'1868AEGain7.1631EU ES AB IR CE I18_AR2033.33
467275.27TUBA1B'protein_coding'26AEGain26.983EU AB E4_Da0.00
477525.21POLR2F'protein_coding'1434AEGain3.915EU AB ER15a0.00
487605.20ZNF434'protein_coding'737AEGain10.3510EU ES AB ER13a20.00
497675.19APH1A'protein_coding'1125AEGain20.545EU ER2c75.00
507715.18SPCS2'protein_coding'15AEGain12.583EU E3a_E4a50.00
517735.17AC104438.1'pseudogene'12AEGain6.321EU ER1a0
527745.17AC094107.1'lincRNA'12AEGain7.051CE I1_AR20
537825.15AC119751.8'protein_coding'24DEGain35.560N/AAC119751.8N/A
547935.13RIC8B'protein_coding'1028AEGain10.042EU I16_SR40
558035.10TOMM7'protein_coding'714AEGain7.374EU ES E1a_E3b33.33
568185.09CDKN1A'protein_coding'716DEGain16.793EU AB CDKN1A0.00
578205.08CDH6'protein_coding'112DEGain33.880N/ACDH6N/A
588305.07IARS'protein_coding'2070AEGain9.2828EU AB IR ER21a0.00
598385.05NPEPPS'protein_coding'123AEGain8.965EU AB CE I9_AR100
608465.04RPS26'protein_coding'14AEGain5.537EU AB E2_Da100.00
618515.02SPRY1'protein_coding'24DEGain32.500N/ASPRY1N/A
628525.02KLHDC8A'protein_coding'414DEGain32.471EU KLHDC8A0
638585.01SF3B2'protein_coding'226AEGain7.414EU ER2a66.67
648644.99MTSS1L'protein_coding'217AEGain6.514EU ER15b66.67
658664.98NPNT'protein_coding'414DEGain31.620N/ANPNTN/A
668874.93AP001024.1'protein_coding'24AEGain26.262EU AB ER4a0
678894.92COL5A2'protein_coding'459DEGain30.3312EU COL5A20.00
688984.91NT5C2'protein_coding'1641AEGain7.843AB CE I16_AR10
698994.91COX5B'protein_coding'411AEGain6.538EU ES AB E3b_E4a66.67
709044.90FAM184B'protein_coding'118AEGain2.5110EU AB IR E2_Da20.00
719064.90IDS'protein_coding'823AEGain3.714EU E11a_E12a0.00
729094.89C16orf62'protein_coding'437AEGain4.861I31_SR30
739214.88SLC25A46'protein_coding'313AEGain8.402EU CE I5_AR10
749244.87CHMP4A'protein_coding'212AEGain10.814EU IR I5_AR3100.00
759324.87STAG3'protein_coding'2585AEGain4.3234EU AB IR ER4d25.00
769414.84ATP5I'protein_coding'14AEGain9.875EU E2a_E3a75.00
779534.82CDK6'protein_coding'516DEGain28.240N/ACDK6N/A
789984.75ATP5J2'protein_coding'1021AEGain14.758EU ES AB E2a_E3a50.00
7910124.74COMMD9'protein_coding'26AEGain2.493EU AB E2_Da100.00
8010144.73IGF2BP2'protein_coding'1137DEGain26.560N/AIGF2BP2N/A
8110164.73CSAD'protein_coding'2057AEGain14.8310EU ES AB ER4a20.00
8210214.72SERPINH1'protein_coding'28DEGain26.351EU SERPINH10
8310244.71LRP1B'protein_coding'598AEGain8.0010EU CE I1_AR2116.67
8410334.69AC090519.7'pseudogene'13AEGain4.863EU AB ER3a0.00
8510354.68COX8A'protein_coding'12AEGain14.581EU E1a_E2a0
8610384.68AC027763.1'processed_transcript'13AEGain3.052EU AB E2_Aa0
8710424.68NDUFB3'protein_coding'410AEGain6.492EU E4a_E5a0.00
8810474.67SEZ6L'protein_coding'1131AEGain7.695ES AB ENST00000343706100.00
8910524.66C20orf111'protein_coding'27AEGain7.5210EU IR CE ER3a50.00
9010614.65C20orf194'protein_coding'342AEGain5.006EU AB CE I7_AR20.00
9110624.64LGALS3BP'protein_coding'312AEGain6.093EU E2a_E3a100.00
9210644.64PAX2'protein_coding'822DEGain24.920N/APAX2N/A
9310734.63SHOX2'protein_coding'720DEGain24.700N/ASHOX2N/A
9410854.61NAV2'protein_coding'546AEGain2.493EU ES E18a_E20a0.00
9511034.59C20orf199'processed_transcript'810AEGain27.184EU ES E2a_E6a66.67
9611154.58AC010619.2'protein_coding'15AEGain6.854EU E4a_E5a33.33
9711174.58RNF182'protein_coding'715DEGain23.880N/ARNF182N/A
9811204.58AC015917.1'pseudogene'12AEGain6.652EU AB ER2a0
9911264.56PSMB1'protein_coding'311AEGain5.922EU E1a_E2b0.00
10011294.56COX6C'protein_coding'14AEGain19.372EU E2a_E3a0.00
10111334.55SESN3'protein_coding'312DEGain23.411EU SESN30
10211354.54PSMC1'protein_coding'111AEGain7.437EU AB E3a_E4a33.33
10311394.53AC004540.2'processed_transcript'24DEGain23.180N/AAC004540.2N/A
10411454.53ITM2C'protein_coding'719AEGain3.842EU ES ENST000003350050.00
10511484.52JPH4'protein_coding'311AEGain6.763EU ER7b50.00
10611674.49MAP4K4'protein_coding'1959AEGain5.647EU ES AB E21a_E22a40.00
10711704.48HOXC10'protein_coding'12DEGain22.380N/AHOXC10N/A
10811714.48TUT1'protein_coding'1241AEGain7.363EU E9d_E10a0.00
10911754.47DLGAP1'protein_coding'1128AEGain2.956EU ES E3b_E5a60.00
11011924.45CNRIP1'protein_coding'411AEGain2.431EU E1a_E1f0
11111944.45PDZD2'protein_coding'433AEGain3.695EU ES CE I2_AR10.00
11211954.45MPDZ'protein_coding'1163AEGain5.064EU AB E47_Aa0.00
11311964.45C2orf68'protein_coding'512AEGain6.452EU ER1d0.00
11412004.44EGR1'protein_coding'25DEGain21.730N/AEGR1N/A
11512044.43MRPL33'protein_coding'819AEGain6.703EU ES E5a_E7b50.00
11612134.43AP000787.1'lincRNA'11DEGain21.510N/AAP000787.1N/A
11712184.42RP11-414H17.3'processed_transcript'12AEGain6.701EU ER2a0
11812234.42RIMS2'protein_coding'1043AEGain5.5610EU CE I1_AR70
11912254.42TMEM87A'protein_coding'323AEGain5.242EU E1a_E2a0.00
12012264.42COX7A2L'protein_coding'1123AEGain6.717EU ES AB ER2b0.00
12112274.42CIT'protein_coding'555AEGain5.9717EU AB ER9a61.54
12212334.41ZSWIM7'protein_coding'1531AEGain7.1314EU AB CE ER1o70.00
12312384.40TARBP1'protein_coding'947AEGain5.529EU ES IR E18a_E20a0.00
12412484.39TTBK1'protein_coding'322AEGain2.861AB E10_Aa0
12512514.39DTNA'protein_coding'1541AEGain2.257EU CE E4a_E5a40.00
12612544.39TMPRSS5'protein_coding'113AEGain6.865EU AB CE I8_AR20.00
12712554.39SNRPC'protein_coding'411AEGain4.666EU AB E3a_E4a75.00
12812574.38NOMO1'protein_coding'234AEGain5.865EU AB ER16a0.00
12912584.38COX7C'protein_coding'13AEGain12.942EU E1a_E2a0.00
13012594.38UBE2B'protein_coding'16AEGain5.181AB E5_Da0
13112614.38SPTBN2'protein_coding'240AEGain5.474IR I230
13212634.38DCTN2'protein_coding'216AEGain7.933EU ES E2a_E5a100.00
13312754.36DUSP4'protein_coding'514DEGain20.603EU AB DUSP40.00
13412844.35GMPPA'protein_coding'1442AEGain6.0724EU AB IR E3a_E3c22.22
13512864.35RBX1'protein_coding'39AEGain5.942EU ER2a0.00
13612944.34TXNDC11'protein_coding'423AEGain5.036EU AB CE ER10a50.00
13712964.34BCCIP'protein_coding'716AEGain5.235EU ENST0000046333025.00
13813024.33ZYX'protein_coding'1234DEGain11.025EU AB ZYX100.00
13913034.33RALGPS1'protein_coding'1849AEGain2.746EU ES E8a_E10a60.00
14013074.32GDF15'protein_coding'12DEGain20.030N/AGDF15N/A
14113224.30ARV1'protein_coding'716AEGain5.495EU AB CE I7_AR150.00
14213374.29PGRMC2'protein_coding'37AEGain7.702EU ER1c100.00
14313414.28AC112777.1'rRNA_pseudogene'11DEGain19.450N/AAC112777.1N/A
14413494.27KLHL20'protein_coding'521AEGain4.783EU AB E2_Ac100.00
14513624.26DOPEY1'protein_coding'654AEGain2.328EU AB E39_Dd0.00
14613634.26SFI1'protein_coding'3291AEGain5.1710EU AB IR I30_AR10.00
14713664.25PRDX1'protein_coding'716AEGain7.412EU E3b_E4a100.00
14813684.25RPL31'protein_coding'1122AEGain4.272EU ER1i100.00
14913834.24NR2C2'protein_coding'1541AEGain4.097EU ES AB ER20a50.00
15013864.24MORF4L1'protein_coding'316AEGain5.517EU E7a_E8a50.00
15113954.22TMCC1'protein_coding'510AEGain2.904EU ES CE I4_AR8100.00
15213994.22TCEAL3'protein_coding'413AEGain5.002EU ER4c0.00
15314054.21MRPL18'protein_coding'410AEGain4.982ES AB E2a_E3a0
15414094.21GAS2L3'protein_coding'18DEGain18.540N/AGAS2L3N/A
15514124.21UBR3'protein_coding'1467AEGain4.766EU ES CE I22_AR125.00
15614134.21AIF1L'protein_coding'1228AEGain2.405EU ES AB E1a_E2c0.00
15714154.21AP000751.4'protein_coding'427AEGain5.723EU AB CE I3_AR10
15814164.21HUS1'protein_coding'1131AEGain5.844EU AB ER12a0
15914214.20UBTF'protein_coding'424AEGain6.173AB E3_Aa0
16014224.20FBXW7'protein_coding'416AEGain5.351AB E12_Da0
16114254.20NAPG'protein_coding'112AEGain5.434EU CE I8_AR30
16214284.19RGS16'protein_coding'15DEGain18.300N/ARGS16N/A
16314314.19ITSN1'protein_coding'37101AEGain5.0019EU AB ER37f23.08
16414324.19EYA4'protein_coding'931DEGain18.260N/AEYA4N/A
16514384.18KIAA1143'protein_coding'26AEGain4.803EU ER1b50.00
16614464.18LETM2'protein_coding'212AEGain5.0212EU AB IR CE E10_Aa0
16714494.17NDUFB4'protein_coding'613AEGain5.7612EU AB IR E1a_E2b20.00
16814514.17TJAP1'protein_coding'1732AEGain3.425EU ES IR E2a_E6a0.00
16914524.17NASP'protein_coding'1235AEGain6.7310EU ES AB ER3b71.43
17014544.17PCK2'protein_coding'212DEGain17.960N/APCK2N/A
17114574.16HOXC9'protein_coding'12DEGain17.880N/AHOXC9N/A
17214604.16RPS2'protein_coding'17AEGain10.323EU E2a_E3a50.00
17314634.15ACTG1'protein_coding'16AEGain6.523EU E2a_E3a50.00
17414674.15MAT2A'protein_coding'1439AEGain2.644EU AB ER1h0.00
17514734.15NXPH4'protein_coding'12DEGain17.730N/ANXPH4N/A
17614804.14SCN3A'protein_coding'945AEGain3.086EU IR I1733.33
17714904.13PTX3'protein_coding'13DEGain17.520N/APTX3N/A
17814944.13PEX5'protein_coding'725AEGain5.413EU CE I11_AR10.00
17914964.12APBA1'protein_coding'215AEGain3.322EU ES ENST000004700820.00
18014994.12ARHGEF6'protein_coding'324AEGain4.456EU ES E17a_E20a60.00
18115104.11ZIC3'protein_coding'37DEGain17.210N/AZIC3N/A
18215114.11ANKRD28'protein_coding'1758AEGain4.851I11_SR30
18315174.10CLIP4'protein_coding'1649AEGain3.092EU AB E22_Aa0
18415224.09FRAS1'protein_coding'584DEGain17.030N/AFRAS1N/A
18515244.09CPNE1'protein_coding'3682AEGain13.715AB CE I16_AR20
18615264.09E2F7'protein_coding'315DEGain17.020N/AE2F7N/A
18715274.09PPIC'protein_coding'27DEGain17.020N/APPICN/A
18815334.08HSPA9'protein_coding'117AEGain11.572EU E1a_E2a100.00
18915344.08C14orf2'protein_coding'25AEGain9.962EU E3a_E4a100.00
19015374.08FAM128A'protein_coding'821AEGain4.756EU E2a_E3b25.00
19115384.08HDAC10'protein_coding'2465AEGain18.604EU ER10a66.67
19215434.07HOXC6'protein_coding'34DEGain16.800N/AHOXC6N/A
19315574.05EEF1A1'protein_coding'1131AEGain5.2318EU AB E4_Df38.46
19415624.05SLC39A6'protein_coding'211AEGain4.481ES E1a_E3a0
19515734.04YJEFN3'protein_coding'722AEGain10.018EU AB E2a_E3a33.33
19615764.04ATP5C1'protein_coding'1128AEGain12.104EU ES E10a_E13a0.00
19715784.04HMGA2'protein_coding'510DEGain16.430N/AHMGA2N/A
19815844.03PIAS2'protein_coding'418AEGain4.716EU AB CE E16_Da0
19915854.03RPL27'protein_coding'15AEGain4.844EU ER5a66.67
20015944.02VSNL1'protein_coding'615AEGain2.532EU AB ENST000004575250
20115964.02MAP3K1'protein_coding'222DEGain16.233EU MAP3K10.00
20216114.01SRGAP3'protein_coding'2065AEGain4.7418EU ES AB IR CE ER2c0.00
20316154.00SNAPC4'protein_coding'123AEGain4.732EU AB E5_Aa0
20416194.00KCNIP2'protein_coding'1738AEGain2.343EU AB E8_Ae0
20516243.99RASA4B'protein_coding'840AEGain5.283EU ER16a0.00
20616273.98GPR162'protein_coding'833AEGain10.1332EU ES AB IR E9a_E11b65.00
20716293.98CLK1'protein_coding'1748AEGain3.613EU AB E9_Da0.00
20816303.98INPP5K'protein_coding'1539AEGain3.647EU AB E3b_E4a75.00
20916363.97SPAG9'protein_coding'537AEGain3.424EU CE I18_AR2100.00
21016383.97NARS'protein_coding'315AEGain6.242EU E2a_E3a0.00
21116393.97POU3F4'protein_coding'11DEGain15.680N/APOU3F4N/A
21216403.97RGS12'protein_coding'524AEGain4.863EU AB E13_Da0
21316483.96PARN'protein_coding'327AEGain4.892EU CE I3_AR10
21416573.95DGUOK'protein_coding'1123AEGain4.655EU ES E1a_E7a25.00
21516603.95USP10'protein_coding'316AEGain3.695EU ES E3a_E4a50.00
21616623.95RPS8'protein_coding'818AEGain9.296EU AB E3_Da33.33
21716643.95LYPLAL1'protein_coding'1223AEGain5.6411EU AB IR I6_AR40.00
21816693.94AC018665.1'lincRNA'18AEGain2.992AB E6_Aa0
21916733.93TERF1'protein_coding'312AEGain5.115EU AB ER1c0.00
22016743.93ATP5G1'protein_coding'26AEGain5.616EU E3a_E4a40.00
22116753.93SLC35A5'protein_coding'722AEGain4.514EU AB E2_Da0.00
22216873.92RPLP2'protein_coding'15AEGain8.735EU E4a_E5a75.00
22316883.92ST8SIA1'protein_coding'39AEGain6.135EU IR I1_SR1100.00
22416903.92IFT172'protein_coding'1781AEGain3.556EU AB CE E16_Aa0.00
22516913.92EPB41L1'protein_coding'2459AEGain2.823EU ES E23a_E25a0.00
22616923.92TRIM44'protein_coding'15AEGain3.2715EU AB IR CE I2_SR20
22716953.92KIAA0430'protein_coding'336AEGain2.814EU I10_SR10.00
22816973.92SLC6A15'protein_coding'416DEGain15.103EU ES AB SLC6A150.00
22916983.92PPWD1'protein_coding'111AEGain5.528EU ES AB CE E1a_E6a50.00
23017053.91TMEM41A'protein_coding'720AEGain5.402EU AB ER8a0
23117093.90SNX17'protein_coding'934AEGain3.948EU AB E1a_E2a60.00
23217103.90KDELR3'protein_coding'39DEGain14.960N/AKDELR3N/A
23317163.90HLA-E'protein_coding'618AEGain5.603EU AB E1_Db0.00
23417203.89RAPGEFL1'protein_coding'524AEGain3.322EU AB E3_Da0
23517213.89ATP5A1'protein_coding'928AEGain5.413EU ES E2a_E4a50.00
23617273.89GIGYF2'protein_coding'48123AEGain4.257EU ES AB E4a_E11b0.00
23717303.89PKIG'protein_coding'916AEGain2.854EU ES AB ER9a0.00
23817323.89DLG2'protein_coding'1659AEGain2.319EU CE ER3a28.57
23917363.89TNIK'protein_coding'1756AEGain3.016EU ES E16a_E18a40.00
24017423.88IQGAP2'protein_coding'237DEGain14.750N/AIQGAP2N/A
24117453.88CEP350'protein_coding'1568AEGain4.236EU AB ER2b66.67
24217493.87RP11-263K19.2'processed_transcript'619AEGain3.3711EU AB IR E8_Aa50.00
24317513.87APEX1'protein_coding'411AEGain5.523EU AB E5_Db0.00
24417523.87PDE4DIP'protein_coding'30102AEGain2.5525EU ES AB CE ER15b36.84
24517633.87SEC61G'protein_coding'717AEGain13.532EU E3a_E4a0.00
24617643.86CIRBP'protein_coding'412AEGain8.615EU AB E2a_E3a33.33
24717693.86MAP3K13'protein_coding'1643AEGain5.736EU AB E2a_E3a25.00
24817713.86CEBPZ'protein_coding'320AEGain4.934EU ES AB E1a_E3a0.00
24917723.86RBM17'protein_coding'1536AEGain5.512EU ES E1a_E3b0.00
25017743.85RPS18'protein_coding'819AEGain4.708EU AB E3_Ad33.33
25117783.85FAM168A'protein_coding'39AEGain9.803EU ES E3a_E5a50.00


Candidate Differential and Alternative Expression Genes (Loss ONLY)

The following table lists candidate genes ranked according to 'Score'. Only the top 250 genes appear in each list. For a complete list download the results file provided above. To appear in this list, a 'candidate gene' must be differentially expressed at the gene level (DE) or contain at least one alternatively expressed (AE) feature. The 'Score' is based on the fold change as well as other factors for AE events (multiple features supporting the same event, reciprocity, etc.). The 'Event Type' indicates whether the gene was differentially expressed ('DE') or alternatively expressed 'AE'. 'Direction' refers to the direction (+ve/-ve) of the fold change. 'Gain' (+ve) indicates higher expression in library A than library B and vice versa. 'FC' stands for fold change. '# AE Events' is the number of significant alternative expression events observed for each gene. 'AE Codes' refers to various alternative expression subtypes (listed above). The 'Top Feature' is the most significant AE event observed for an AE gene. 'Adjacency' refers to the number of consecutive AE features (potentially supporting the same isoform). 'Adjacency %' refers to the percent of all AE events for a gene that were adjacent to each other.


RankOverall
Rank
ScoreNameGene
Type
Trans.
Count
Exon
Count
Event
Type
DirectionFC# AE
Events
AE CodesTop FeatureAdjacency
%
1114.69AP000692.1'processed_transcript'12AELoss-582.493EU AB E1a_E2a0
2214.11ST3GAL5'protein_coding'1535AELoss-191.184AB E17_Aa0
3313.95AASS'protein_coding'739AELoss-306.489EU AB CE E24_Dc66.67
4413.74AC128648.1'protein_coding'18AELoss-539.165EU AB E2a_E3a0.00
5513.46AC133435.2'lincRNA'12AELoss-2031.593EU AB E1a_E2a0
6613.39C19orf29'protein_coding'422AELoss-276.538EU AB E4_Aa0.00
7713.23GTPBP5'protein_coding'1330AELoss-396.989EU AB E3_Db60.00
8812.90AIFM1'protein_coding'624AELoss-226.211AB E11_Aa0
9912.79MSH5'protein_coding'2878AELoss-339.0518EU ES AB CE E15a_E16a50.00
101012.77FARP1'protein_coding'839AELoss-250.202AB E20_Aa0
111112.68PQLC2'protein_coding'923AELoss-116.914EU AB E10_Aa100.00
121212.56FAM116A'protein_coding'938AELoss-232.113AB CE E21_Ab0
131312.52AC007216.1'pseudogene'13AELoss-265.365EU AB E2a_E3a0.00
141412.34RP1-12G14.4'pseudogene'22AELoss-1389.272AB E1_Ab0
151512.00AC087742.1'lincRNA'16AELoss-114.4215EU AB IR E1a_E2a100.00
161611.97C7orf46'protein_coding'821AELoss-158.077EU AB CE E3_Da0.00
171711.96FAM73A'protein_coding'422AELoss-111.646EU AB E10f_E11a50.00
181811.87ZNF283'protein_coding'942AELoss-179.6611EU AB CE E17_Db0.00
191911.84CYB561D1'protein_coding'815AELoss-199.793EU AB E2_Db0
202011.74AC138409.3'protein_coding'28AELoss-75.028EU AB E5a_E6a50.00
212111.66DHX34'protein_coding'633AELoss-199.692EU AB E15_Aa0
222211.61AC005197.3'protein_coding'12AELoss-124.471AB E1_Da0
232311.58SLC25A17'protein_coding'1644AELoss-133.194EU AB CE E3_Da0
242411.56MAP2K2'protein_coding'826AELoss-115.114EU AB E7a_E7c50.00
252511.24AC034193.2'lincRNA'12AELoss-104.011AB E1_Da0
262611.17C21orf58'protein_coding'1331AELoss-103.532AB E9_Dd0
272711.17RWDD2B'protein_coding'718AELoss-96.317EU ES AB E2_Da33.33
282811.17C7orf44'protein_coding'2047AELoss-139.8711EU ES AB IR E11_Df25.00
292911.16ELK4'protein_coding'38AELoss-97.831AB E2_Da0
303011.13DOCK4'protein_coding'2187AELoss-146.395EU AB E51_Aa0.00
313111.09TOP2A'protein_coding'557AELoss-39.249EU AB E19_Da40.00
323211.04PTPRZ1'protein_coding'1255AELoss-141.0113EU ES AB E16_Ad30.00
333311.02HMGB1'protein_coding'1227AELoss-142.6015EU ES AB IR E6b_E7b57.14
343410.91AC007620.1'processed_transcript'12AELoss-69.111AB E1_Da0
353510.89SLC25A15'protein_coding'720AELoss-120.693EU AB E9_Aa0
363610.88PHACTR4'protein_coding'729AELoss-125.514EU AB E19_Dc0.00
373710.80FIS1'protein_coding'919AELoss-531.407EU ES AB E5_Aa60.00
383810.79PANK1'protein_coding'720AELoss-95.841AB E4_Da0
393910.71LIMK1'protein_coding'931AELoss-108.433EU AB E16_Aa0
404010.66GNL3L'protein_coding'530AELoss-65.967EU AB E19e_E19d33.33
414110.49SNORA72'lincRNA'12AELoss-91.241AB E1_Da0
424210.48DHTKD1'protein_coding'627AELoss-109.681AB E16_Db0
434310.47MORC2'protein_coding'638AELoss-116.873ES AB E2_Da0
444410.44AKT2'protein_coding'2672AELoss-64.456EU ES AB E9_Aa0.00
454510.24PARP1'protein_coding'1042AELoss-52.454EU AB ER24c100.00
464610.22MRPS18B'protein_coding'513AELoss-96.073EU AB E2_Dd100.00
474710.12NDUFS2'protein_coding'1545AELoss-53.545EU ES AB E13_Aa100.00
484810.11AC073940.1'pseudogene'12AELoss-122.554EU AB E2_Aa100.00
494910.04CHN2'protein_coding'2664AELoss-79.8922EU ES AB E7_Aa18.75
505010.04TMEM104'protein_coding'213AELoss-65.793EU ES AB E3_Da100.00
515210.01PHC3'protein_coding'2459AELoss-72.426EU AB E6_Da0
52539.98ARMC10'protein_coding'1024AELoss-109.7517EU ES AB IR CE E9_Aa66.67
53549.96CHCHD2'protein_coding'26AELoss-78.573EU AB E1_Ab0
54559.96CROCCL1'processed_transcript'420AELoss-97.633AB CE E11_Db0
55569.93NUDT1'protein_coding'1320AELoss-49.863EU ES AB E4_Da100.00
56579.92NHP2L1'protein_coding'1022AELoss-42.484EU AB E8_Dc100.00
57589.83OGT'protein_coding'1246AELoss-86.448EU ES AB E4_Da0.00
58599.83AGRN'protein_coding'1054AELoss-52.526EU ES AB E25_Aa33.33
59609.78CBS'protein_coding'1848AELoss-52.523AB E4_Aa0
60619.77C22orf25'protein_coding'2757AELoss-52.7914EU ES AB E6_Db33.33
61629.73AIMP2'protein_coding'412AELoss-36.511AB E3_Aa0
62639.73TAPBPL'protein_coding'218AELoss-78.036EU AB E14a_E15a0
63649.71TMEM111'protein_coding'517AELoss-72.013AB E2_Aa0
64659.70ACTA2'protein_coding'717AELoss-65.336EU ES AB E4_Db50.00
65669.68SEPT2'protein_coding'47102AELoss-347.083EU AB E12_Da0
66679.68TNRC18'protein_coding'1565AELoss-41.476EU AB E25_Da0
67699.58RP3-476K8.2'processed_transcript'12AELoss-66.041AB E2_Aa0
68709.58ALG3'protein_coding'1638AELoss-26.954EU AB E5_Df100.00
69719.52CTC-398G3.2'pseudogene'24AELoss-38.992AB E1_Ab0
70729.43PDHB'protein_coding'1034AELoss-50.656EU AB E1_Dg50.00
71739.42ANO10'protein_coding'1952AELoss-63.099EU AB E4_Ab25.00
72749.40AL136180.1'protein_coding'12AELoss-74.591AB E2_Aa0
73759.39CD46'protein_coding'2736AELoss-38.434EU AB E5_Ae0
74769.33WDR44'protein_coding'835AELoss-37.883EU AB E22_Da0.00
75779.32SNUPN'protein_coding'412AELoss-59.211AB E2_Aa0
76789.30VGLL4'protein_coding'1843AELoss-46.1512EU ES AB CE E10_Aa0.00
77799.27KIAA1704'protein_coding'824AELoss-56.858EU ES AB E13_Aa0.00
78809.27MED24'protein_coding'1350AELoss-65.949EU AB E2_Aa66.67
79819.25PRPF3'protein_coding'829AELoss-378.896EU AB IR E14_Aa0
80829.24VCAN'protein_coding'518AELoss-68.7512EU AB IR CE E13a_E14a0
81839.19AC130686.3'protein_coding'517AELoss-33.283EU AB E9_Db0.00
82849.18SEPT7'protein_coding'1433AELoss-51.406EU ES AB E1b_E5a25.00
83869.09NMNAT1'protein_coding'615AELoss-56.048EU ES AB ENST0000046268625.00
84879.07TRIM22'protein_coding'1233AELoss-30.963AB E9_Da0
85889.07RPL7A'protein_coding'1127AELoss-337.8812EU AB IR E2_Ab16.67
86899.05AC010733.5'processed_transcript'12AELoss-63.131AB E2_Aa0
87909.05GPR82'protein_coding'25AELoss-61.175EU AB E3_Ac0.00
88919.02SNRNP25'protein_coding'719AELoss-63.007EU AB E2_Aa60.00
89929.01MLL3'protein_coding'1899AELoss-163.9816EU AB IR CE E62a_E63a50.00
90939.00RPS27'protein_coding'410AELoss-46.374EU E2b_E3a0.00
91948.99AC121253.1'protein_coding'46AELoss-46.234EU AB E1_Dd0
92958.95SLC2A11'protein_coding'3070AELoss-78.4514EU AB E13_Df40.00
93968.94BMS1P1'pseudogene'316AELoss-76.696EU AB E9_Aa75.00
94978.94C1orf151'protein_coding'1128AELoss-48.3116EU ES AB IR E3_Aa50.00
95988.90CNOT10'protein_coding'1952AELoss-162.2813EU ES AB E21_Ab0.00
96998.90ETV5'protein_coding'1439AELoss-34.422AB E8_Db0
971008.89AC004447.1'lincRNA'12AELoss-52.432EU AB E1a_E2a0
981018.84AL589863.1'pseudogene'13AELoss-36.353AB E2_Aa0
991028.84AC063943.3'lincRNA'13AELoss-59.472AB E3_Aa0
1001038.83CDC16'protein_coding'1237AELoss-41.3114EU AB IR E18_Aa33.33
1011048.82MLC1'protein_coding'722AELoss-39.053EU ES E7a_E9a0.00
1021058.80MLLT6'protein_coding'1038AELoss-229.511AB E13_Db0
1031068.78GS1-174L6.1'processed_transcript'12AELoss-51.652EU AB E1a_E2a0
1041078.77AC026271.1'processed_transcript'210AELoss-39.071AB E8_Aa0
1051088.77FNBP1'protein_coding'1643AELoss-53.0115EU ES AB IR CE E17a_E24b33.33
1061098.72TAF13'protein_coding'27AELoss-45.683EU AB E5_Aa0
1071108.68LAMP1'protein_coding'516AELoss-54.194EU AB E4a_E5a0.00
1081118.66MTA1'protein_coding'1954AELoss-33.964EU ES AB E10_Da0.00
1091128.64CCNL2'protein_coding'2158AELoss-29.773EU AB E9_Da0
1101148.60AFG3L1'processed_transcript'1841AELoss-121.205EU AB E2_Dc0.00
1111158.59FAT3'protein_coding'534AELoss-3.059EU ES AB E3_Aa66.67
1121168.58RABGEF1'protein_coding'1028AELoss-43.889EU ES AB E9a_E10a0.00
1131178.58NDUFB5'protein_coding'1640AELoss-24.5915EU ES AB E7_Aa63.64
1141188.58POLM'protein_coding'2049AELoss-28.991AB E6_Ab0
1151198.58SON'protein_coding'2558AELoss-43.3112EU ES AB E3_Da25.00
1161208.57AC012170.2'lincRNA'15AELoss-45.228EU AB E3a_E4a75.00
1171218.56C7orf59'protein_coding'1222AELoss-40.637EU ES AB E3_Dc50.00
1181228.55AGAP2'protein_coding'220AELoss-15.103EU E15a_E16a100.00
1191238.53PDHA1'protein_coding'1234AELoss-19.195EU ES AB E11_Aa33.33
1201248.53AC133555.1'protein_coding'14AELoss-161.043EU AB E3a_E4a0
1211258.52EIF2B3'protein_coding'1131AELoss-46.459EU AB E8_Db0.00
1221268.52POLR2H'protein_coding'1433AELoss-35.532AB E6_Aa0
1231278.50ABHD14A'protein_coding'1140AELoss-154.663AB E5_Ab0
1241288.49ING4'protein_coding'2346AELoss-172.716EU AB E4_Aa50.00
1251298.46ACSS2'protein_coding'2770AELoss-39.3113EU AB IR E9_Aa0.00
1261308.44AC013283.2'lincRNA'12AELoss-33.901AB E1_Da0
1271318.41PKD1'protein_coding'26115AELoss-159.7020EU ES AB IR E28_Db0.00
1281328.40DENND1B'protein_coding'1544AELoss-38.471AB E4_Aa0
1291338.36HLA-B'protein_coding'1029AELoss-23.689EU AB E1k_E2a0.00
1301348.35SLC27A1'protein_coding'418AELoss-19.114AB IR E8_Aa0
1311358.34NRSN2'protein_coding'514AELoss-29.974EU AB E6_Db0.00
1321368.34ARIH2'protein_coding'3576AELoss-49.6615EU ES AB E5_Dd80.00
1331378.32GPR17'protein_coding'713DELoss-319.480N/AGPR17N/A
1341388.31MANEAL'protein_coding'49AELoss-43.531AB E4_Dc0
1351398.29HMGN1'protein_coding'2146AELoss-34.799EU AB ER5j25.00
1361408.28AKR1B1'protein_coding'1641AELoss-119.585EU AB E5_Ab0.00
1371418.27POLR2B'protein_coding'1347AELoss-43.599EU AB IR E3_Ab33.33
1381428.26MAP3K7IP2'protein_coding'619AELoss-121.443ES AB E5_Aa0
1391438.26AL671710.1'lincRNA'15AELoss-24.763EU ES E1a_E5a100.00
1401448.21RP11-179H18.3'processed_transcript'12AELoss-96.361AB E1_Da0
1411458.20H6PD'protein_coding'27AELoss-130.692AB E5_Ac0
1421468.19FTSJ2'protein_coding'614AELoss-35.403EU AB E5_Da0
1431488.17HNRNPC'protein_coding'818AELoss-29.785EU ES AB E2_Da0.00
1441498.16RANBP2'protein_coding'1149AELoss-114.591AB E13_Dc0
1451508.16ZNF3'protein_coding'1639AELoss-39.639EU AB E4_Dc40.00
1461528.14CCDC12'protein_coding'925AELoss-41.502EU AB E4_Db0
1471538.14AC093310.1'protein_coding'210DELoss-281.500N/AAC093310.1N/A
1481548.12AL354696.3'lincRNA'12AELoss-113.602AB E1_Da0
1491558.12SUPT16H'protein_coding'126AELoss-30.743EU E16a_E17a0.00
1501568.11CNN3'protein_coding'617AELoss-25.111AB E3_Aa0
1511578.10MKRN1'protein_coding'1644AELoss-46.956EU ES AB E9_Aa100.00
1521588.10SNRNP35'protein_coding'513AELoss-40.895EU AB E5_Ad0
1531598.09MRPL48'protein_coding'313AELoss-14.625EU ES AB E6_Aa100.00
1541608.07XPO1'protein_coding'3188AELoss-21.2215EU AB E6_Aa44.44
1551618.06RETSAT'protein_coding'1030AELoss-37.044AB E6_Da0
1561628.06EIF2B4'protein_coding'1136AELoss-49.206EU AB E2_Dn75.00
1571638.05MTRF1'protein_coding'1133AELoss-31.657EU ES AB E6_Da50.00
1581648.03XIST'processed_transcript'820DELoss-262.000N/AXISTN/A
1591658.02AP000662.1'lincRNA'12AELoss-30.493EU AB E1_Da0
1601668.00GSDMB'protein_coding'1428AELoss-38.494AB E2_Ad0
1611687.99C9orf80'protein_coding'720AELoss-105.356EU AB E3_Db0.00
1621697.98TFRC'protein_coding'1546AELoss-11.384EU AB E16_Aa0.00
1631707.98ZNF791'protein_coding'410AELoss-25.542EU AB E5_Dd0
1641717.95PDIA3'protein_coding'622AELoss-20.654EU ES AB E1a_E4a0.00
1651727.94SPP1'protein_coding'411AELoss-7.497EU AB E6_Da60.00
1661737.94AC010323.2'lincRNA'12AELoss-87.393EU AB E1a_E2a0
1671747.92GFAP'protein_coding'411DELoss-242.112EU GFAP0.00
1681757.91AC096663.2'pseudogene'24AELoss-149.443EU AB E1_Da0
1691767.89TNR'protein_coding'627DELoss-237.000N/ATNRN/A
1701777.87MGST3'protein_coding'1431AELoss-37.6510EU ES AB CE E1_Ag25.00
1711787.87HLA-C'protein_coding'1227AELoss-24.766EU AB E1_Ak0.00
1721797.84AC024075.1'lincRNA'12AELoss-124.751AB E1_Da0
1731807.84GFPT1'protein_coding'530AELoss-18.741AB E3_Da0
1741817.84MMADHC'protein_coding'621AELoss-83.055EU ES AB E8_Da50.00
1751827.83RAB7A'protein_coding'1026AELoss-77.187EU AB E5b_E5c33.33
1761837.82MSH6'protein_coding'822AELoss-28.033EU AB E5_Da0
1771847.82ARFGAP3'protein_coding'1228AELoss-28.124EU AB E2_Da0.00
1781857.82CRTC2'protein_coding'933AELoss-118.933EU ES AB E8_Aa0.00
1791867.82KIAA1033'protein_coding'234AELoss-19.765AB IR E25_Da0
1801877.82AMT'protein_coding'2554AELoss-23.749EU AB E2_Aa57.14
1811887.82RPL3'protein_coding'2248AELoss-30.3222EU ES AB CE E6_Ad21.43
1821897.81WDR32'protein_coding'514AELoss-30.292EU AB E8_Db0
1831907.80C10orf18'protein_coding'1239AELoss-79.033EU AB E23_Db0.00
1841917.80IDH3B'protein_coding'1541AELoss-24.434EU E5c_E5c0.00
1851927.80FAM45A'protein_coding'1130AELoss-29.0312EU ES AB E12_Aa14.29
1861937.78RNF121'protein_coding'418AELoss-32.043EU ES AB E4_Aa0.00
1871947.78HSPD1'protein_coding'1443AELoss-24.807EU ES AB E5_Db50.00
1881957.76TMEM218'protein_coding'27AELoss-17.844EU ES AB E2_Aa100.00
1891967.75TOR1AIP2'protein_coding'616AELoss-26.692ES AB E4_Aa0
1901977.74HEATR3'protein_coding'620AELoss-32.194EU AB E13_Ab0.00
1911997.73AL691432.1'lincRNA'14AELoss-80.135EU AB E3_Aa0
1922007.71PFKL'protein_coding'1243AELoss-33.378EU ES AB E13_Af50.00
1932017.71TFR2'protein_coding'1345AELoss-27.205EU AB E10_Aa0
1942027.70RAB5A'protein_coding'1028AELoss-24.352AB E2_Da0
1952037.68FUS'protein_coding'1236AELoss-31.957EU AB ENST000003945330.00
1962047.66PPIL2'protein_coding'1658AELoss-13.4427EU ES AB IR E8_Da41.67
1972057.65RAB3GAP2'protein_coding'1155AELoss-22.506EU ES AB CE E37_Aa0.00
1982067.65BAX'protein_coding'610AELoss-12.912ES AB E5_Da0
1992077.63LZTS2'protein_coding'923AELoss-17.804AB IR E7_Aa0
2002087.63CC2D1A'protein_coding'535AELoss-28.402AB E24_Aa0
2012097.62NGDN'protein_coding'313AELoss-23.923EU E5a_E6a0.00
2022107.61ATP2B1'protein_coding'523AELoss-8.626EU ES AB ENST0000035914275.00
2032117.60TNRC6A'protein_coding'1144AELoss-52.066EU ES AB E18_Dc0.00
2042127.58RPL23A'protein_coding'718AELoss-15.9917EU ES AB IR CE E1a_E4b28.57
2052137.57XXyac-R12DG2.3'protein_coding'416AELoss-147.168ES AB CE E2_Aa0
2062147.57FAM3C'protein_coding'724AELoss-13.628EU ES CE E10c_E11b33.33
2072157.54AC007308.1'processed_transcript'12AELoss-29.242EU AB ENST000004307190
2082167.54HDLBP'protein_coding'50143AELoss-68.1518EU ES AB IR E16b_E16b12.50
2092177.54AC005726.5'pseudogene'12AELoss-28.642AB E2_Aa0
2102187.50STRBP'protein_coding'1042AELoss-94.019AB IR CE E2_Aa0
2112197.49TRIM33'protein_coding'727AELoss-76.166EU AB CE E16_Db0.00
2122207.47FRMD6'protein_coding'320AELoss-6.484EU AB E4_Aa50.00
2132217.46ZNF425'protein_coding'512AELoss-73.703EU AB E5_Ab0
2142227.46P4HB'protein_coding'1541AELoss-22.044EU AB E8a_E8c0
2152237.44POR'protein_coding'2768AELoss-14.305EU AB E10_Da50.00
2162247.44GGCT'protein_coding'1020AELoss-15.898EU AB E4_Aa50.00
2172267.44AC004086.1'protein_coding'28AELoss-72.676EU E2a_E3a40.00
2182277.42CDC42'protein_coding'717AELoss-20.666EU ES AB E3_Da0.00
2192297.40IDH1'protein_coding'1338AELoss-24.186EU ES AB E2_Aa66.67
2202307.40TMEM14C'protein_coding'514AELoss-25.264EU AB E4a_E4b0
2212317.39HBEGF'protein_coding'310AELoss-120.771AB E5_Aa0
2222327.37NDUFA3'protein_coding'1736AELoss-18.8420EU ES AB IR E8_Aa55.56
2232337.37AL121809.2'protein_coding'15AELoss-100.603EU AB E3_Aa0
2242347.36ZNF730'protein_coding'15AELoss-75.671AB E5_Aa0
2252357.36MDM2'protein_coding'2236AELoss-18.424EU AB ER14c50.00
2262367.35NLGN4X'protein_coding'720AELoss-145.051AB E5_Aa0
2272377.33AC145132.1'pseudogene'13AELoss-24.841AB E3_Aa0
2282387.32DHDDS'protein_coding'1630AELoss-21.523EU AB E8_Da0
2292397.32GEFT'protein_coding'830AELoss-20.791AB E13_Ab0
2302407.32CIDECP'processed_transcript'713AELoss-25.952AB E4_Aa0
2312417.31HK1'protein_coding'2460AELoss-24.805EU AB E6_Aa0
2322427.29C1orf61'protein_coding'2757AELoss-18.1914EU ES AB IR E10_Dh14.29
2332437.29TUBA1A'protein_coding'25AELoss-20.831AB E4_Da0
2342447.28LDHA'protein_coding'1237AELoss-47.507EU ES AB ER1g100.00
2352467.28PSME2'protein_coding'418AELoss-21.862ES AB E5a_E6c0
2362477.27LYRM4'protein_coding'819AELoss-43.684EU AB E3_Da100.00
2372487.26SFRS18'protein_coding'1032AELoss-85.7816EU AB E3_Dc66.67
2382507.25PSIP1'protein_coding'1134AELoss-74.653EU AB E9a_E10a0.00
2392517.23PDDC1'protein_coding'619AELoss-88.485EU AB E6f_E6g0.00
2402527.22AC018633.1'pseudogene'226AELoss-25.095EU AB E18_Aa0.00
2412537.22RP11-3J10.3'pseudogene'23AELoss-74.872EU AB ENST000003965190
2422547.21SAP18'protein_coding'818AELoss-16.135EU AB E1_Ac0.00
2432557.21PLD3'protein_coding'1542AELoss-68.798EU AB IR E12_Aa0.00
2442567.21TRNAU1AP'protein_coding'1029AELoss-26.826EU AB CE E1_Dd0.00
2452577.20TTLL3'protein_coding'40100AELoss-56.4522EU ES AB E12_Ae16.67
2462587.18FAM107A'protein_coding'919DELoss-145.260N/AFAM107AN/A
2472597.18CKS1B'protein_coding'715AELoss-17.101AB E4_Aa0
2482617.17PPP2R1A'protein_coding'1442AELoss-16.3410EU ES AB E7b_E7b50.00
2492627.17DCUN1D2'protein_coding'1229AELoss-24.301AB E10_Db0
2502637.17RPL13P5'processed_transcript'511AELoss-15.522AB E4_Ac0
2512647.16PEG10'protein_coding'49AELoss-25.604EU E2d_E2d33.33